Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= epV30561
(509 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At3g12110.1 68416.m01507 actin 11 (ACT11) identical to SP|P53496... 327 3e-90
At3g53750.1 68416.m05938 actin 3 (ACT3) identical to SP|P53493 A... 326 4e-90
At2g37620.1 68415.m04615 actin 1 (ACT1) identical to SP|P10671 A... 326 4e-90
At5g59370.1 68418.m07440 actin 4 (ACT4) identical to SP|P53494 A... 323 5e-89
At3g46520.1 68416.m05050 actin 12 (ACT12) identical to SP|P53497... 322 1e-88
At5g09810.1 68418.m01135 actin 7 (ACT7) / actin 2 identical to S... 321 2e-88
At3g18780.2 68416.m02386 actin 2 (ACT2) identical to SP|Q96292 A... 320 3e-88
At3g18780.1 68416.m02385 actin 2 (ACT2) identical to SP|Q96292 A... 320 3e-88
At1g49240.1 68414.m05520 actin 8 (ACT8) identical to SP|Q96293 A... 320 3e-88
At2g42100.1 68415.m05205 actin, putative very strong similarity ... 298 1e-81
At2g42090.1 68415.m05204 actin, putative similar to SP|P53496 Ac... 280 4e-76
At2g42170.1 68415.m05219 actin, putative similar to actin 2 [Ara... 266 4e-72
At3g27000.1 68416.m03378 actin-related protein 2 (ARP2) nearly i... 197 4e-51
At1g13180.1 68414.m01528 actin-related protein 3 (ARP3) identica... 126 9e-30
At1g18450.1 68414.m02302 actin-related protein 4 (ARP4) neary id... 107 3e-24
At3g33520.1 68416.m04291 actin-related protein 6 (ARP6) nearly i... 107 4e-24
At3g60830.1 68416.m06805 actin-related protein 7 (ARP7) identica... 85 3e-17
At3g12380.1 68416.m01543 actin/actin-like family protein similar... 79 1e-15
At5g56180.2 68418.m07009 actin-related protein, putative (ARP8) ... 70 8e-13
At5g56180.1 68418.m07008 actin-related protein, putative (ARP8) ... 70 8e-13
At1g73910.1 68414.m08559 actin-related protein 5 (ARP5) identica... 45 3e-05
At5g43500.2 68418.m05318 expressed protein 36 0.021
At5g43500.1 68418.m05319 expressed protein 36 0.021
At1g52570.1 68414.m05935 phospholipase D alpha 2 / PLD alpha 2 (... 32 0.26
At3g15730.1 68416.m01993 phospholipase D alpha 1 / PLD alpha 1 (... 30 0.79
At3g24130.1 68416.m03030 pectinesterase family protein contains ... 29 1.8
At2g36910.1 68415.m04527 multidrug resistance P-glycoprotein (PG... 29 1.8
At2g19780.1 68415.m02311 leucine-rich repeat family protein / ex... 29 1.8
At1g65780.1 68414.m07465 tRNA-splicing endonuclease positive eff... 29 1.8
At5g04940.2 68418.m00523 SET domain-containing protein (SUVH1) c... 29 2.4
At5g04940.1 68418.m00522 SET domain-containing protein (SUVH1) c... 29 2.4
At4g01900.1 68417.m00250 P II nitrogen sensing protein (GLB I) i... 28 4.2
At3g28860.1 68416.m03602 multidrug resistance P-glycoprotein, pu... 28 4.2
At5g11080.1 68418.m01294 ubiquitin family protein contains INTER... 27 7.3
At3g15400.1 68416.m01954 anther development protein, putative si... 27 7.3
At2g39480.1 68415.m04845 ABC transporter family protein related ... 27 7.3
At5g35830.1 68418.m04305 ankyrin repeat family protein contains ... 27 9.7
At3g28790.1 68416.m03593 expressed protein 27 9.7
At1g69670.1 68414.m08018 cullin, putative contains similarity to... 27 9.7
At1g26830.1 68414.m03270 cullin, putative similar to Cullin homo... 27 9.7
>At3g12110.1 68416.m01507 actin 11 (ACT11) identical to SP|P53496
Actin 11 {Arabidopsis thaliana}
Length = 377
Score = 327 bits (803), Expect = 3e-90
Identities = 154/165 (93%), Positives = 161/165 (97%)
Frame = +1
Query: 13 KIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNSPAMYVAIQAVLSLY 192
KIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFN+PAMYVAIQAVLSLY
Sbjct: 86 KIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLY 145
Query: 193 ASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTT 372
ASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTT+
Sbjct: 146 ASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTS 205
Query: 373 AEREIVRDIKEKLCYVALDFEQEMATAAASTSLEKSYELPDGQVI 507
AEREIVRD+KEKL Y+ALD+EQEM TA S+S+EKSYELPDGQVI
Sbjct: 206 AEREIVRDVKEKLAYIALDYEQEMETANTSSSVEKSYELPDGQVI 250
>At3g53750.1 68416.m05938 actin 3 (ACT3) identical to SP|P53493
Actin 3 {Arabidopsis thaliana}; supported by full-length
cDNA: Ceres: 19581.
Length = 377
Score = 326 bits (802), Expect = 4e-90
Identities = 153/165 (92%), Positives = 161/165 (97%)
Frame = +1
Query: 13 KIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNSPAMYVAIQAVLSLY 192
KIWHHTFYNELRVAPEEHP+LLTEAPLNPKANREKMTQIMFETFN+PAMYVAIQAVLSLY
Sbjct: 86 KIWHHTFYNELRVAPEEHPILLTEAPLNPKANREKMTQIMFETFNAPAMYVAIQAVLSLY 145
Query: 193 ASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTT 372
ASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTD LMKILTERGYSFTTT
Sbjct: 146 ASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDALMKILTERGYSFTTT 205
Query: 373 AEREIVRDIKEKLCYVALDFEQEMATAAASTSLEKSYELPDGQVI 507
AEREIVRDIKEKLCY+ALD+EQE+ TA S+S+EK+YELPDGQVI
Sbjct: 206 AEREIVRDIKEKLCYIALDYEQELETAKTSSSVEKNYELPDGQVI 250
>At2g37620.1 68415.m04615 actin 1 (ACT1) identical to SP|P10671
Actin 1 (Actin 3) {Arabidopsis thaliana}
Length = 377
Score = 326 bits (802), Expect = 4e-90
Identities = 153/165 (92%), Positives = 161/165 (97%)
Frame = +1
Query: 13 KIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNSPAMYVAIQAVLSLY 192
KIWHHTFYNELRVAPEEHP+LLTEAPLNPKANREKMTQIMFETFN+PAMYVAIQAVLSLY
Sbjct: 86 KIWHHTFYNELRVAPEEHPILLTEAPLNPKANREKMTQIMFETFNAPAMYVAIQAVLSLY 145
Query: 193 ASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTT 372
ASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTD LMKILTERGYSFTTT
Sbjct: 146 ASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDALMKILTERGYSFTTT 205
Query: 373 AEREIVRDIKEKLCYVALDFEQEMATAAASTSLEKSYELPDGQVI 507
AEREIVRDIKEKLCY+ALD+EQE+ TA S+S+EK+YELPDGQVI
Sbjct: 206 AEREIVRDIKEKLCYIALDYEQELETAKTSSSVEKNYELPDGQVI 250
>At5g59370.1 68418.m07440 actin 4 (ACT4) identical to SP|P53494
Actin 4 {Arabidopsis thaliana}
Length = 377
Score = 323 bits (793), Expect = 5e-89
Identities = 152/165 (92%), Positives = 161/165 (97%)
Frame = +1
Query: 13 KIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNSPAMYVAIQAVLSLY 192
KIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFN+PAMYVAIQAVLSLY
Sbjct: 86 KIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLY 145
Query: 193 ASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTT 372
ASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTD+LMKILTERGYSFTTT
Sbjct: 146 ASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDHLMKILTERGYSFTTT 205
Query: 373 AEREIVRDIKEKLCYVALDFEQEMATAAASTSLEKSYELPDGQVI 507
AEREIVRD+KEKL Y+ALDFEQE+ T+ S+S+EKS+ELPDGQVI
Sbjct: 206 AEREIVRDMKEKLSYIALDFEQELETSKTSSSVEKSFELPDGQVI 250
>At3g46520.1 68416.m05050 actin 12 (ACT12) identical to SP|P53497
Actin 12 {Arabidopsis thaliana}
Length = 377
Score = 322 bits (790), Expect = 1e-88
Identities = 151/165 (91%), Positives = 161/165 (97%)
Frame = +1
Query: 13 KIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNSPAMYVAIQAVLSLY 192
KIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFN+PAMYVAIQAVLSLY
Sbjct: 86 KIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLY 145
Query: 193 ASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTT 372
ASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTD+LMKILTERGYSFTTT
Sbjct: 146 ASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDHLMKILTERGYSFTTT 205
Query: 373 AEREIVRDIKEKLCYVALDFEQEMATAAASTSLEKSYELPDGQVI 507
AEREIVRD+KEKL Y+ALD+EQE+ T+ S+S+EKS+ELPDGQVI
Sbjct: 206 AEREIVRDMKEKLSYIALDYEQELETSKTSSSVEKSFELPDGQVI 250
>At5g09810.1 68418.m01135 actin 7 (ACT7) / actin 2 identical to
SP|P53492 Actin 7 (Actin-2) {Arabidopsis thaliana}
Length = 377
Score = 321 bits (788), Expect = 2e-88
Identities = 153/165 (92%), Positives = 159/165 (96%)
Frame = +1
Query: 13 KIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNSPAMYVAIQAVLSLY 192
KIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFN PAMYVAIQAVLSLY
Sbjct: 86 KIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNVPAMYVAIQAVLSLY 145
Query: 193 ASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTT 372
ASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTD LMKILTERGY FTTT
Sbjct: 146 ASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDSLMKILTERGYMFTTT 205
Query: 373 AEREIVRDIKEKLCYVALDFEQEMATAAASTSLEKSYELPDGQVI 507
AEREIVRDIKEKL YVALD+EQE+ TA +S+S+EK+YELPDGQVI
Sbjct: 206 AEREIVRDIKEKLAYVALDYEQELETAKSSSSVEKNYELPDGQVI 250
>At3g18780.2 68416.m02386 actin 2 (ACT2) identical to SP|Q96292
Actin 2 {Arabidopsis thaliana}; nearly identical to
SP|Q96293 Actin 8 [Arabidopsis thaliana] GI:1669387 and
to At1g49240
Length = 377
Score = 320 bits (787), Expect = 3e-88
Identities = 150/165 (90%), Positives = 160/165 (96%)
Frame = +1
Query: 13 KIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNSPAMYVAIQAVLSLY 192
KIWHHTFYNELR+APEEHPVLLTEAPLNPKANREKMTQIMFETFNSPAMYVAIQAVLSLY
Sbjct: 86 KIWHHTFYNELRIAPEEHPVLLTEAPLNPKANREKMTQIMFETFNSPAMYVAIQAVLSLY 145
Query: 193 ASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTT 372
ASGRTTGIVLDSGDGVSHTVPIYEG++LPHAILRLDLAGRDLTDYLMKILTERGY FTTT
Sbjct: 146 ASGRTTGIVLDSGDGVSHTVPIYEGFSLPHAILRLDLAGRDLTDYLMKILTERGYMFTTT 205
Query: 373 AEREIVRDIKEKLCYVALDFEQEMATAAASTSLEKSYELPDGQVI 507
AEREIVRDIKEKL +VA+D+EQEM T+ S+S+EK+YELPDGQVI
Sbjct: 206 AEREIVRDIKEKLSFVAVDYEQEMETSKTSSSIEKNYELPDGQVI 250
>At3g18780.1 68416.m02385 actin 2 (ACT2) identical to SP|Q96292
Actin 2 {Arabidopsis thaliana}; nearly identical to
SP|Q96293 Actin 8 [Arabidopsis thaliana] GI:1669387 and
to At1g49240
Length = 371
Score = 320 bits (787), Expect = 3e-88
Identities = 150/165 (90%), Positives = 160/165 (96%)
Frame = +1
Query: 13 KIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNSPAMYVAIQAVLSLY 192
KIWHHTFYNELR+APEEHPVLLTEAPLNPKANREKMTQIMFETFNSPAMYVAIQAVLSLY
Sbjct: 86 KIWHHTFYNELRIAPEEHPVLLTEAPLNPKANREKMTQIMFETFNSPAMYVAIQAVLSLY 145
Query: 193 ASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTT 372
ASGRTTGIVLDSGDGVSHTVPIYEG++LPHAILRLDLAGRDLTDYLMKILTERGY FTTT
Sbjct: 146 ASGRTTGIVLDSGDGVSHTVPIYEGFSLPHAILRLDLAGRDLTDYLMKILTERGYMFTTT 205
Query: 373 AEREIVRDIKEKLCYVALDFEQEMATAAASTSLEKSYELPDGQVI 507
AEREIVRDIKEKL +VA+D+EQEM T+ S+S+EK+YELPDGQVI
Sbjct: 206 AEREIVRDIKEKLSFVAVDYEQEMETSKTSSSIEKNYELPDGQVI 250
>At1g49240.1 68414.m05520 actin 8 (ACT8) identical to SP|Q96293
Actin 8 {Arabidopsis thaliana}; nearly identical to
SP|Q96292 Actin 2 [Arabidopsis thaliana] GI:1669387, and
to At3g18780
Length = 377
Score = 320 bits (787), Expect = 3e-88
Identities = 150/165 (90%), Positives = 160/165 (96%)
Frame = +1
Query: 13 KIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNSPAMYVAIQAVLSLY 192
KIWHHTFYNELR+APEEHPVLLTEAPLNPKANREKMTQIMFETFNSPAMYVAIQAVLSLY
Sbjct: 86 KIWHHTFYNELRIAPEEHPVLLTEAPLNPKANREKMTQIMFETFNSPAMYVAIQAVLSLY 145
Query: 193 ASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTT 372
ASGRTTGIVLDSGDGVSHTVPIYEG++LPHAILRLDLAGRDLTDYLMKILTERGY FTTT
Sbjct: 146 ASGRTTGIVLDSGDGVSHTVPIYEGFSLPHAILRLDLAGRDLTDYLMKILTERGYMFTTT 205
Query: 373 AEREIVRDIKEKLCYVALDFEQEMATAAASTSLEKSYELPDGQVI 507
AEREIVRDIKEKL +VA+D+EQEM T+ S+S+EK+YELPDGQVI
Sbjct: 206 AEREIVRDIKEKLSFVAVDYEQEMETSKTSSSIEKNYELPDGQVI 250
>At2g42100.1 68415.m05205 actin, putative very strong similarity to
SP|P53496 Actin 11 {Arabidopsis thaliana}, SP|P53493
Actin 3 {Arabidopsis thaliana}; contains Pfam profile
PF00022: Actin
Length = 378
Score = 298 bits (732), Expect = 1e-81
Identities = 134/165 (81%), Positives = 154/165 (93%)
Frame = +1
Query: 13 KIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNSPAMYVAIQAVLSLY 192
KIWHHTFYNELR+ PEEHP+LLTEAPLNPK NREKMTQIMFE+F P+MY+ IQAVLSLY
Sbjct: 87 KIWHHTFYNELRLEPEEHPILLTEAPLNPKVNREKMTQIMFESFAFPSMYIGIQAVLSLY 146
Query: 193 ASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTT 372
+SGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLT+YL KI+ ERGY++TT+
Sbjct: 147 SSGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTEYLTKIMMERGYTYTTS 206
Query: 373 AEREIVRDIKEKLCYVALDFEQEMATAAASTSLEKSYELPDGQVI 507
AEREIVRDIKEKLCY+A+D+EQEM A S++++++YELPDGQVI
Sbjct: 207 AEREIVRDIKEKLCYIAVDYEQEMEKATTSSAIDRTYELPDGQVI 251
>At2g42090.1 68415.m05204 actin, putative similar to SP|P53496 Actin
11 {Arabidopsis thaliana}; contains Pfam profile
PF00022: Actin
Length = 366
Score = 280 bits (686), Expect = 4e-76
Identities = 127/165 (76%), Positives = 148/165 (89%)
Frame = +1
Query: 13 KIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNSPAMYVAIQAVLSLY 192
KIWH+TFYNELRV PEEHPVLLTEAP NPKANREKMTQIMFE+F+ PAMYV++Q+VL LY
Sbjct: 75 KIWHYTFYNELRVDPEEHPVLLTEAPYNPKANREKMTQIMFESFDVPAMYVSMQSVLYLY 134
Query: 193 ASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTT 372
+SGRTTG+VLD G+ VSHTVP+YEGYALPH ILRLDL GRDLTDYL++I+TERGY++TT+
Sbjct: 135 SSGRTTGVVLDLGERVSHTVPVYEGYALPHGILRLDLGGRDLTDYLIEIMTERGYTYTTS 194
Query: 373 AEREIVRDIKEKLCYVALDFEQEMATAAASTSLEKSYELPDGQVI 507
AEREIVRDIKEKLCYVALD+EQEM +++K+Y LPDGQ I
Sbjct: 195 AEREIVRDIKEKLCYVALDYEQEMEKTTKGWTIDKTYVLPDGQEI 239
>At2g42170.1 68415.m05219 actin, putative similar to actin 2
[Arabidopsis thaliana] gi|9293903|dbj|BAB01806
Length = 329
Score = 266 bits (653), Expect = 4e-72
Identities = 126/165 (76%), Positives = 147/165 (89%)
Frame = +1
Query: 13 KIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNSPAMYVAIQAVLSLY 192
KIW+HTFY+ELRVAPEEHPVLLTEAPLNPKA+REKMTQIMFETF P+MY+ +QA LSL+
Sbjct: 41 KIWYHTFYSELRVAPEEHPVLLTEAPLNPKADREKMTQIMFETFAVPSMYIGMQAALSLH 100
Query: 193 ASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTT 372
ASGRTTG VLDSGDGVS+ VPIYEG ALPHAILRLDLAGR LT+YLMKI+ ERGY T+
Sbjct: 101 ASGRTTGTVLDSGDGVSYIVPIYEGSALPHAILRLDLAGRHLTNYLMKIMMERGY---TS 157
Query: 373 AEREIVRDIKEKLCYVALDFEQEMATAAASTSLEKSYELPDGQVI 507
AERE+VRDIKE+ Y+ALD+EQEM A S++++++YELPDGQVI
Sbjct: 158 AEREVVRDIKEQFGYIALDYEQEMEKATKSSAIDRTYELPDGQVI 202
>At3g27000.1 68416.m03378 actin-related protein 2 (ARP2) nearly
identical to actin-related protein 2 (ARP2) [Arabidopsis
thaliana] GI:3818624; contains Pfam profile PF00022:
Actin
Length = 389
Score = 197 bits (480), Expect = 4e-51
Identities = 84/164 (51%), Positives = 120/164 (73%)
Frame = +1
Query: 16 IWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNSPAMYVAIQAVLSLYA 195
+W H FYNEL++ P + +LLT+ PLNP NREKM + MFE +N +++ IQAVL+LYA
Sbjct: 86 VWDHAFYNELKINPSDCKILLTDPPLNPSKNREKMIETMFEKYNFAGVFIQIQAVLTLYA 145
Query: 196 SGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTA 375
G TG+V+DSGDGV+H VP+ +GY+ PH R+++AGR +T YL+ +L+ RGY+ TA
Sbjct: 146 QGLLTGLVIDSGDGVTHVVPVVDGYSFPHLTKRMNVAGRHITAYLVDLLSRRGYAMNKTA 205
Query: 376 EREIVRDIKEKLCYVALDFEQEMATAAASTSLEKSYELPDGQVI 507
+ E VR+IKEKLCY++ D+++E +T L K+Y LPDG+VI
Sbjct: 206 DFETVREIKEKLCYISYDYKRESQLGLETTILVKNYTLPDGRVI 249
>At1g13180.1 68414.m01528 actin-related protein 3 (ARP3) identical
to actin-related protein 3 (ARP3) [Arabidopsis thaliana]
GI:21427461; contains Pfam profile PF00022: Actin
Length = 427
Score = 126 bits (304), Expect = 9e-30
Identities = 58/148 (39%), Positives = 89/148 (60%), Gaps = 5/148 (3%)
Frame = +1
Query: 13 KIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNSPAMYVAIQAVLSLY 192
+ W +N LR PE+H LLTE+PL P +RE +I+FETFN P +Y+A+ +VL+L
Sbjct: 103 RYWQQCIFNYLRCDPEDHYFLLTESPLTPPESREYTGEILFETFNVPGLYIAVNSVLALA 162
Query: 193 ASGRT-----TGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGY 357
A T TG+V+D GDG +H VP+ EGY + I + +AG+D+T ++ +++ ERG
Sbjct: 163 AGYTTSKCEMTGVVVDVGDGATHVVPVAEGYVIGSCIKSIPIAGKDVTLFIQQLMRERGE 222
Query: 358 SFTTTAEREIVRDIKEKLCYVALDFEQE 441
+ ++ R +KE CY D +E
Sbjct: 223 NIPPEDSFDVARKVKEMYCYTCSDIVKE 250
>At1g18450.1 68414.m02302 actin-related protein 4 (ARP4) neary
identical to actin-related protein 4 (ARP4) [Arabidopsis
thaliana] GI:21427463; contains Pfam profile PF00022:
Actin; supporting cDNA gi|21427462|gb|AF507912.1|
Length = 441
Score = 107 bits (258), Expect = 3e-24
Identities = 70/194 (36%), Positives = 102/194 (52%), Gaps = 30/194 (15%)
Frame = +1
Query: 16 IWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNSPAMYVAIQAVLSLYA 195
IW H F + L + P EHP+LL E PLN + REK ++MFE + PA+++A VL+ +A
Sbjct: 109 IWEHAFKSCLMIDPTEHPMLLAEPPLNTQQQREKAAELMFEKYKVPALFMAKNPVLTSFA 168
Query: 196 SGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERG------Y 357
+GR T +V+D G G + P+++GY L A++ L G LTD L+K L +G Y
Sbjct: 169 TGRATSLVVDCGGGSTTISPVHDGYVLQKAVVSSPLGGEFLTDCLLKSLESKGIKIRPRY 228
Query: 358 SF-------------------TTTA-----EREIVRDIKEKLCYVALDFEQEMATAAAST 465
SF TT + +R IV DIK+ +C V + + + T
Sbjct: 229 SFKRKEVRAGEFQVEDVDIPDTTESYKLFCQRMIVGDIKDSICRVPDTPYDDKSYSNIPT 288
Query: 466 SLEKSYELPDGQVI 507
+ SYELPDGQ +
Sbjct: 289 T---SYELPDGQTL 299
>At3g33520.1 68416.m04291 actin-related protein 6 (ARP6) nearly
identical to actin-related protein 6 (ARP6) [Arabidopsis
thaliana] GI:21427467; contains Pfam profile PF00022:
Actin
Length = 421
Score = 107 bits (257), Expect = 4e-24
Identities = 62/173 (35%), Positives = 98/173 (56%), Gaps = 11/173 (6%)
Frame = +1
Query: 13 KIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNSPAMYVA-IQAVLSL 189
+IW H F + L +AP +LLTEAPL+ + + +++FE F ++Y+A Q+++ L
Sbjct: 78 EIWSHLFTSLLHIAPSSSSLLLTEAPLSIPSVQRTTDELVFEDFGFSSLYIAHPQSLVHL 137
Query: 190 YASGR---------TTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDYLMKIL 342
Y + R +V+D G +H VP+ + L HAI R+DL G+ T+YL +++
Sbjct: 138 YEASRQPDSILSKTQCSLVVDCGFSFTHAVPVLHNFTLNHAIKRIDLGGKAFTNYLKELV 197
Query: 343 TERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMATAAASTSLEKS-YELPDG 498
+ R S E +V D KEKLC+V+LD +++ A +L KS Y LPDG
Sbjct: 198 SYR--SINVMDETFLVDDAKEKLCFVSLDLLRDLRLARNGNTLIKSTYVLPDG 248
>At3g60830.1 68416.m06805 actin-related protein 7 (ARP7) identical
to actin-related protein 7 (ARP7) [Arabidopsis thaliana]
GI:21427469; contains Pfam profile PF00022: Actin
Length = 363
Score = 85.0 bits (201), Expect = 3e-17
Identities = 55/149 (36%), Positives = 74/149 (49%)
Frame = +1
Query: 61 EHPVLLTEAPLNPKANREKMTQIMFETFNSPAMYVAIQAVLSLYASGRTTGIVLDSGDGV 240
E +L T+ PKA RE++ Q+MFETFN Y + QAVLSLYA GR +G +D G G
Sbjct: 88 EGNILFTDPLCTPKAIREQLVQLMFETFNVSGFYASEQAVLSLYAVGRISGCTVDIGHGK 147
Query: 241 SHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYV 420
P+ EG A R +L G +LT + L + S + V +KE+
Sbjct: 148 IDIAPVLEGAVQHIASKRFELGGTELTKLFAQELGKTNPSMNLSMSD--VEKLKEQYANC 205
Query: 421 ALDFEQEMATAAASTSLEKSYELPDGQVI 507
A E E+A + + LPDGQVI
Sbjct: 206 A---EDEIAYKKTQNCEIEQHTLPDGQVI 231
>At3g12380.1 68416.m01543 actin/actin-like family protein similar to
SP|P53946 Actin-like protein ARP5 {Saccharomyces
cerevisiae}; contains Pfam profile PF00022: Actin
Length = 724
Score = 79.4 bits (187), Expect = 1e-15
Identities = 41/133 (30%), Positives = 72/133 (54%), Gaps = 5/133 (3%)
Frame = +1
Query: 61 EHPVLLTEAPLNPKANREKMTQIMFETFNSPAMYVAIQAVLS-----LYASGRTTGIVLD 225
+HP+L+TE NP +R KM +++FET+ PA+ + A S L+ + GIVL
Sbjct: 116 DHPILITECACNPVQSRSKMAELLFETYGVPAVAFGVDAAFSYKYNQLHGICKKDGIVLC 175
Query: 226 SGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKE 405
G +H++P +G + R ++ G +TDYL ++L+ + ++ E D+K
Sbjct: 176 PGFTTTHSIPFVDGEPIYKGSSRTNIGGYHVTDYLKQLLSLKYPFHSSRFTWEKAEDLKL 235
Query: 406 KLCYVALDFEQEM 444
+ CY+A D+ E+
Sbjct: 236 EHCYIAPDYASEI 248
>At5g56180.2 68418.m07009 actin-related protein, putative (ARP8)
strong similarity to actin-related protein 8A (ARP8)
[Arabidopsis thaliana] GI:21427473; contains Pfam
profile PF00022: Actin; supporting cDNA
gi|21427470|gb|AF507916.1|
Length = 387
Score = 70.1 bits (164), Expect = 8e-13
Identities = 49/151 (32%), Positives = 80/151 (52%), Gaps = 11/151 (7%)
Frame = +1
Query: 28 TFYNELRVAPEEHPVLLTEAPL-------NPKANREKMTQIMFETF---NSPAMYVAIQA 177
T + ++V P P++++ PL + KA+R ++ +F N PA+ QA
Sbjct: 182 TIFTRMQVKPSMQPIVVS-LPLCHFDDTESAKASRRQLKTAIFNVLFDMNVPAVCAVNQA 240
Query: 178 VLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPH-AILRLDLAGRDLTDYLMKILTERG 354
VL+LYA+ RT+GIV++ G V +PI G + + + LT +L + + E
Sbjct: 241 VLALYAARRTSGIVVNIGFQVITILPILHGKVMRQVGVEVIGFGALKLTGFLKEKMQENN 300
Query: 355 YSFTTTAEREIVRDIKEKLCYVALDFEQEMA 447
SF + VR +KEKLCYVALD++ E++
Sbjct: 301 ISFQSL---YTVRTLKEKLCYVALDYKAELS 328
>At5g56180.1 68418.m07008 actin-related protein, putative (ARP8)
strong similarity to actin-related protein 8A (ARP8)
[Arabidopsis thaliana] GI:21427473; contains Pfam
profile PF00022: Actin; supporting cDNA
gi|21427470|gb|AF507916.1|
Length = 471
Score = 70.1 bits (164), Expect = 8e-13
Identities = 49/151 (32%), Positives = 80/151 (52%), Gaps = 11/151 (7%)
Frame = +1
Query: 28 TFYNELRVAPEEHPVLLTEAPL-------NPKANREKMTQIMFETF---NSPAMYVAIQA 177
T + ++V P P++++ PL + KA+R ++ +F N PA+ QA
Sbjct: 182 TIFTRMQVKPSMQPIVVS-LPLCHFDDTESAKASRRQLKTAIFNVLFDMNVPAVCAVNQA 240
Query: 178 VLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPH-AILRLDLAGRDLTDYLMKILTERG 354
VL+LYA+ RT+GIV++ G V +PI G + + + LT +L + + E
Sbjct: 241 VLALYAARRTSGIVVNIGFQVITILPILHGKVMRQVGVEVIGFGALKLTGFLKEKMQENN 300
Query: 355 YSFTTTAEREIVRDIKEKLCYVALDFEQEMA 447
SF + VR +KEKLCYVALD++ E++
Sbjct: 301 ISFQSL---YTVRTLKEKLCYVALDYKAELS 328
>At1g73910.1 68414.m08559 actin-related protein 5 (ARP5) identical
to actin-related protein 5 (ARP5) GI:21489922 from
[Arabidopsis thaliana]
Length = 145
Score = 44.8 bits (101), Expect = 3e-05
Identities = 18/34 (52%), Positives = 22/34 (64%)
Frame = +1
Query: 16 IWHHTFYNELRVAPEEHPVLLTEAPLNPKANREK 117
+W H F N L + P EHP+LL E PLN + REK
Sbjct: 103 VWDHAFRNCLMIDPTEHPMLLAEPPLNSQQQREK 136
>At5g43500.2 68418.m05318 expressed protein
Length = 584
Score = 35.5 bits (78), Expect = 0.021
Identities = 21/92 (22%), Positives = 47/92 (51%)
Frame = +1
Query: 64 HPVLLTEAPLNPKANREKMTQIMFETFNSPAMYVAIQAVLSLYASGRTTGIVLDSGDGVS 243
H V++ + + +E +T ++ E + + A+ V + + +++ +G TT +++ G S
Sbjct: 238 HAVIVVPETFDTREIKEMLTIVLGELYFNSAV-VHQEGLSAVFGNGLTTACIVNIGAQTS 296
Query: 244 HTVPIYEGYALPHAILRLDLAGRDLTDYLMKI 339
V + +G +LP+ L G D+ L+ I
Sbjct: 297 TVVCVEDGVSLPNTEKILPFGGEDICRCLLWI 328
>At5g43500.1 68418.m05319 expressed protein
Length = 596
Score = 35.5 bits (78), Expect = 0.021
Identities = 21/92 (22%), Positives = 47/92 (51%)
Frame = +1
Query: 64 HPVLLTEAPLNPKANREKMTQIMFETFNSPAMYVAIQAVLSLYASGRTTGIVLDSGDGVS 243
H V++ + + +E +T ++ E + + A+ V + + +++ +G TT +++ G S
Sbjct: 250 HAVIVVPETFDTREIKEMLTIVLGELYFNSAV-VHQEGLSAVFGNGLTTACIVNIGAQTS 308
Query: 244 HTVPIYEGYALPHAILRLDLAGRDLTDYLMKI 339
V + +G +LP+ L G D+ L+ I
Sbjct: 309 TVVCVEDGVSLPNTEKILPFGGEDICRCLLWI 340
>At1g52570.1 68414.m05935 phospholipase D alpha 2 / PLD alpha 2
(PLDALPHA2) (PLD2) / choline phosphatase 2 identical to
phospholipase D alpha 2 ( PLD alpha 2) SP:Q9SSQ9 from
[Arabidopsis thaliana]
Length = 810
Score = 31.9 bits (69), Expect = 0.26
Identities = 19/46 (41%), Positives = 25/46 (54%), Gaps = 3/46 (6%)
Frame = -3
Query: 135 KHDL-GHLL--PVGLGVEGGFGEQHGVLLGGDTQLIVEGVVPDLLP 7
+HDL GHLL P+G+ EG E G DT+ + GV D +P
Sbjct: 760 EHDLPGHLLRYPIGIASEGNITELPGCEFFPDTKARILGVKSDYMP 805
>At3g15730.1 68416.m01993 phospholipase D alpha 1 / PLD alpha 1
(PLDALPHA1) (PLD1) / choline phosphatase 1 identical to
SP:Q38882 Phospholipase D alpha 1 (EC 3.1.4.4)
(AtPLDalpha1) (PLD alpha 1) (Choline phosphatase 1)
(Phosphatidylcholine-hydrolyzing phospholipase D 1)
(PLDalpha) [Arabidopsis thaliana]
Length = 810
Score = 30.3 bits (65), Expect = 0.79
Identities = 19/46 (41%), Positives = 24/46 (52%), Gaps = 3/46 (6%)
Frame = -3
Query: 135 KHDL-GHLL--PVGLGVEGGFGEQHGVLLGGDTQLIVEGVVPDLLP 7
+HDL GHLL P+G+ EG E G DT+ + G D LP
Sbjct: 760 EHDLPGHLLRYPIGVASEGDITELPGFEFFPDTKARILGTKSDYLP 805
>At3g24130.1 68416.m03030 pectinesterase family protein contains
Pfam profile: PF01095 Pectinesterase
Length = 335
Score = 29.1 bits (62), Expect = 1.8
Identities = 15/43 (34%), Positives = 23/43 (53%)
Frame = -3
Query: 378 LSGGGERVTPLGEDLHEVVGQVATSQVQTEDGVGQSVTFVDGY 250
L G G+R+T + D H V Q T ++ V +S+TF + Y
Sbjct: 86 LVGAGKRLTRVEWDDHYSVAQSPTFSTLADNTVVKSITFANSY 128
>At2g36910.1 68415.m04527 multidrug resistance P-glycoprotein (PGP1)
identical to P-glycoprotein GI:3849833 from [Arabidopsis
thaliana]; homologous to mammalian mdr gene,contains
ATP-binding cassette; related to multi drug resistance
proteins
Length = 1286
Score = 29.1 bits (62), Expect = 1.8
Identities = 28/103 (27%), Positives = 46/103 (44%), Gaps = 2/103 (1%)
Frame = +1
Query: 196 SGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTA 375
+G+T +V SG G S V + E + P++ L L G+DL ++ L ++ +
Sbjct: 395 AGKTIALVGSSGSGKSTVVSLIERFYDPNSGQVL-LDGQDLKTLKLRWLRQQ-IGLVSQE 452
Query: 376 EREIVRDIKEKLCYVALDFEQEMATAAASTSLEKSY--ELPDG 498
IKE + D +Q AA + S+ +LPDG
Sbjct: 453 PALFATSIKENILLGRPDADQVEIEEAARVANAHSFIIKLPDG 495
>At2g19780.1 68415.m02311 leucine-rich repeat family protein /
extensin family protein contains leucine rich-repeat
(LRR) domains Pfam:PF00560, INTERPRO:IPR001611; similar
to leucine-rich repeat/extensin 1 (GI:13809918)
[Arabidopsis thaliana]; contains similarity to disease
resistance protein [Lycopersicon esculentum]
gi|3894383|gb|AAC78591
Length = 402
Score = 29.1 bits (62), Expect = 1.8
Identities = 13/36 (36%), Positives = 20/36 (55%)
Frame = -3
Query: 123 GHLLPVGLGVEGGFGEQHGVLLGGDTQLIVEGVVPD 16
G+ + VG+G+ GG G+ GV +GG G P+
Sbjct: 28 GYSIGVGVGIGGGDGDDGGVWIGGGNPNSNPGSAPN 63
>At1g65780.1 68414.m07465 tRNA-splicing endonuclease positive
effector-related contains similarity to SEN1, a positive
effector of tRNA-splicing endonuclease [Saccharomyces
cerevisiae] gi|172574|gb|AAB63976
Length = 1065
Score = 29.1 bits (62), Expect = 1.8
Identities = 11/32 (34%), Positives = 22/32 (68%)
Frame = +1
Query: 379 REIVRDIKEKLCYVALDFEQEMATAAASTSLE 474
R +++D KE+ C+ + ++ +A A AST++E
Sbjct: 826 RNLIQDAKERGCFHSAGEDESLAQAIASTNIE 857
>At5g04940.2 68418.m00523 SET domain-containing protein (SUVH1)
contains Pfam profiles PF00856: SET domain, PF05033:
Pre-SET motif, PF02182: YDG/SRA domain; identical to
cDNA SUVH1 (SUVH1) GI:13517742
Length = 670
Score = 28.7 bits (61), Expect = 2.4
Identities = 12/39 (30%), Positives = 20/39 (51%)
Frame = +3
Query: 246 HRTHLRRLRSAPRHPPSGLGWSRLDRLPHEDPHREGLLV 362
H T +L AP PP+ W+ + + P R+GL++
Sbjct: 348 HNTFKYKLVRAPGQPPAFASWTAIQKWKTGVPSRQGLIL 386
>At5g04940.1 68418.m00522 SET domain-containing protein (SUVH1)
contains Pfam profiles PF00856: SET domain, PF05033:
Pre-SET motif, PF02182: YDG/SRA domain; identical to
cDNA SUVH1 (SUVH1) GI:13517742
Length = 670
Score = 28.7 bits (61), Expect = 2.4
Identities = 12/39 (30%), Positives = 20/39 (51%)
Frame = +3
Query: 246 HRTHLRRLRSAPRHPPSGLGWSRLDRLPHEDPHREGLLV 362
H T +L AP PP+ W+ + + P R+GL++
Sbjct: 348 HNTFKYKLVRAPGQPPAFASWTAIQKWKTGVPSRQGLIL 386
>At4g01900.1 68417.m00250 P II nitrogen sensing protein (GLB I)
identical to P II nitrogen sensing protein GLB I
(GI:7268574) [Arabidopsis thaliana]; similar to nitrogen
regulatory protein P-II (PII signal transducing protein)
(SP:O30794) {Nostoc punctiforme}
Length = 196
Score = 27.9 bits (59), Expect = 4.2
Identities = 22/77 (28%), Positives = 37/77 (48%), Gaps = 4/77 (5%)
Frame = -1
Query: 266 PS*MGTVWETPSPESSTIPVVRPEAYSESTAWMATY-MAGELKVSNMIWVIFSLLALGLR 90
PS + V ++PS S +PVV + S+ Y + ++ + V +LL +G+R
Sbjct: 40 PSCLDLVTKSPSNNSRVLPVVSAQISSDYIPDSKFYKVEAIVRPWRIQQVSSALLKIGIR 99
Query: 89 GASVSST---GCSSGAT 48
G +VS G G+T
Sbjct: 100 GVTVSDVRGFGAQGGST 116
>At3g28860.1 68416.m03602 multidrug resistance P-glycoprotein,
putative similar to mdr-like P-glycoprotein GI:3849833
from [Arabidopsis thaliana]; contains Pfam profiles
PF00005: ABC transporter and PF00664: ABC transporter
transmembrane region; identical to cDNA MDR-like
p-glycoprotein (At3g28860) GI:24324261
Length = 1252
Score = 27.9 bits (59), Expect = 4.2
Identities = 34/145 (23%), Positives = 61/145 (42%), Gaps = 4/145 (2%)
Frame = +1
Query: 61 EHPVLLTEAPLNPKANREKMTQIMFE--TFNSPAM--YVAIQAVLSLYASGRTTGIVLDS 228
+ P ++ + PL+ K + I F+ TF+ P+ + + + SG+T +V S
Sbjct: 344 QRPTIIQD-PLDGKCLDQVHGNIEFKDVTFSYPSRPDVMIFRNFNIFFPSGKTVAVVGGS 402
Query: 229 GDGVSHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEK 408
G G S V + E + P++ ++ L G ++ +K L E+ I E
Sbjct: 403 GSGKSTVVSLIERFYDPNS-GQILLDGVEIKTLQLKFLREQ-IGLVNQEPALFATTILEN 460
Query: 409 LCYVALDFEQEMATAAASTSLEKSY 483
+ Y D AAAS + S+
Sbjct: 461 ILYGKPDATMVEVEAAASAANAHSF 485
>At5g11080.1 68418.m01294 ubiquitin family protein contains
INTERPRO:IPR000626 ubiquitin domain
Length = 352
Score = 27.1 bits (57), Expect = 7.3
Identities = 15/37 (40%), Positives = 22/37 (59%), Gaps = 2/37 (5%)
Frame = +1
Query: 313 DLTDYL-MKILTERGYSFTTTAEREI-VRDIKEKLCY 417
D TD + +KI + T + ER I VRD+K+ +CY
Sbjct: 6 DFTDLIRIKIKILHSTTHTLSVERTIPVRDLKQDICY 42
>At3g15400.1 68416.m01954 anther development protein, putative
similar to anther development protein ATA20 GB:AAC50042
GI:2708813 from [Arabidopsis thaliana]
Length = 416
Score = 27.1 bits (57), Expect = 7.3
Identities = 31/121 (25%), Positives = 48/121 (39%), Gaps = 4/121 (3%)
Frame = -3
Query: 375 SGGGERVTPLGEDLHEVVGQVATSQVQTEDG--VGQSVTFVDGYGVGDTISGVEHDTG-G 205
S GE P + + + Q S+++ ED + + + G G G SGV + G G
Sbjct: 166 SMSGESKHPEHKVKPDQIMQTMASELEEEDPDHTSKPMGYGVGRGYGSGGSGVGYGVGIG 225
Query: 204 TTGGVQRXXXXXXXXXXXXXXXLKHDLGHLLPVGLGVEGGFGEQHGVLLGGDTQL-IVEG 28
++GG + G G+G GG G G+ GG T + I EG
Sbjct: 226 SSGGSGFGEGIGSSGGNGFGEGIGSSGGSGFGEGIGSSGGSGFGEGIGSGGGTGIGIGEG 285
Query: 27 V 25
+
Sbjct: 286 I 286
>At2g39480.1 68415.m04845 ABC transporter family protein related to
multi drug resistance proteins and P-glycoproteins
Length = 1407
Score = 27.1 bits (57), Expect = 7.3
Identities = 19/48 (39%), Positives = 25/48 (52%)
Frame = +1
Query: 199 GRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDYLMKIL 342
G+T +V SG G S + + E Y P A L L GRDL Y ++ L
Sbjct: 1186 GQTVAVVGVSGSGKSTIISLIERYYDPVAGQVL-LDGRDLKSYNLRWL 1232
>At5g35830.1 68418.m04305 ankyrin repeat family protein contains
ankyrin repeats, Pfam:PF00023
Length = 282
Score = 26.6 bits (56), Expect = 9.7
Identities = 9/25 (36%), Positives = 17/25 (68%)
Frame = -3
Query: 420 DIAELLLDVTNDFPLSGGGERVTPL 346
+IA++L++ D P+ GG + TP+
Sbjct: 171 EIAKMLIEKNKDLPMIRGGGKTTPI 195
>At3g28790.1 68416.m03593 expressed protein
Length = 608
Score = 26.6 bits (56), Expect = 9.7
Identities = 11/18 (61%), Positives = 12/18 (66%)
Frame = +2
Query: 239 SPTPYPSTKVTLCPTPSS 292
SPTP PST PTPS+
Sbjct: 278 SPTPTPSTPTPSTPTPST 295
>At1g69670.1 68414.m08018 cullin, putative contains similarity to
Cullin homolog 3 (CUL-3) SP:Q13618, GI:3639052 from
[Homo sapiens]; contains Pfam profile PF00888: Cullin
family
Length = 732
Score = 26.6 bits (56), Expect = 9.7
Identities = 16/46 (34%), Positives = 26/46 (56%), Gaps = 5/46 (10%)
Frame = +1
Query: 256 IYEGYALPHAILRLDLAGRDLTD-----YLMKILTERGYSFTTTAE 378
++E Y H RL L+G+ ++D ++K+ TE GY FT+ E
Sbjct: 418 VFEKYYKQHLAKRL-LSGKTVSDDAERNLIVKLKTECGYQFTSKLE 462
>At1g26830.1 68414.m03270 cullin, putative similar to Cullin homolog
3 (CUL-3) SP:Q13618, GI:3639052 from [Homo sapiens];
contains Pfam profile PF00888: Cullin family
Length = 732
Score = 26.6 bits (56), Expect = 9.7
Identities = 16/46 (34%), Positives = 26/46 (56%), Gaps = 5/46 (10%)
Frame = +1
Query: 256 IYEGYALPHAILRLDLAGRDLTD-----YLMKILTERGYSFTTTAE 378
++E Y H RL L+G+ ++D ++K+ TE GY FT+ E
Sbjct: 418 VFEKYYKQHLAKRL-LSGKTVSDDAERSLIVKLKTECGYQFTSKLE 462
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 9,057,303
Number of Sequences: 28952
Number of extensions: 176910
Number of successful extensions: 699
Number of sequences better than 10.0: 40
Number of HSP's better than 10.0 without gapping: 660
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 691
length of database: 12,070,560
effective HSP length: 76
effective length of database: 9,870,208
effective search space used: 917929344
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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