Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= epV30560
(516 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
04_04_1062 - 30498158-30498271,30498358-30498518,30498606-304989... 157 5e-39
06_03_0999 - 26752410-26752523,26752601-26752830,26752914-267531... 153 6e-38
08_01_0871 + 8502396-8502417,8503606-8503732,8503891-8503990,850... 134 3e-32
03_03_0001 + 13611070-13611172,13611812-13611873,13612001-136120... 114 3e-26
05_01_0383 + 2990812-2990855,2991364-2991463,2991554-2991622,299... 95 4e-20
06_01_0229 - 1757998-1758241,1758318-1758388,1758467-1758586,175... 30 1.3
02_05_0181 - 26522849-26522932,26523053-26523184,26523263-265233... 30 1.3
01_01_0386 - 2985563-2985986,2986301-2986390,2986529-2986668,298... 29 2.2
08_02_0802 + 21386248-21387468 28 3.9
03_03_0117 - 14583102-14583186,14585202-14585336,14585440-145856... 28 3.9
02_01_0246 + 1617326-1617367,1618903-1624419,1625040-1625498,162... 28 3.9
01_01_1234 - 10007446-10007940,10008030-10008125,10008980-100092... 28 3.9
07_03_0689 + 20711313-20711906,20713224-20713860,20713946-20714049 28 5.1
10_01_0315 - 3454846-3455465,3455562-3455663,3455828-3455954,345... 27 6.8
09_04_0124 + 14862603-14863937 27 8.9
07_03_0633 + 20120560-20123464,20123608-20123672 27 8.9
07_03_0390 + 17573653-17574089,17574250-17574280,17574397-17575134 27 8.9
03_05_0488 - 24847076-24847220,24847823-24847872,24848139-248482... 27 8.9
>04_04_1062 -
30498158-30498271,30498358-30498518,30498606-30498924,
30499412-30499477,30499601-30499726,30499821-30499961,
30500482-30500535,30501508-30501636,30501733-30501870,
30501993-30502061,30502135-30502203,30502468-30502623,
30503795-30503895,30503986-30504136,30504475-30504520,
30504539-30504637,30504796-30504928,30505018-30505195,
30505282-30505524,30505612-30505680,30505986-30506085,
30506898-30507007
Length = 923
Score = 157 bits (381), Expect = 5e-39
Identities = 84/155 (54%), Positives = 102/155 (65%), Gaps = 2/155 (1%)
Frame = +1
Query: 58 GLEIWRIENFEPVAVPKTQFGLFYSGDSYIVLNTTGDKD-RLTWDIHFWLGSRTSQDEAG 234
GLE+WRIENF+PV VP + G FY GDSYI+L TT K+ D+H+WLG TSQDEAG
Sbjct: 38 GLEVWRIENFKPVPVPTSSHGKFYMGDSYIILKTTALKNGSFRHDLHYWLGKDTSQDEAG 97
Query: 235 AAAILTVNLDDEQFQGSAVQHREVQYYESKEFLEYFSPAIRYLKGGHASGFSHVTINEGT 414
AAILTV L D G AVQ+REVQ E+++ L YF P I GG ASGF+HV +N+
Sbjct: 98 TAAILTVEL-DAALGGRAVQYREVQGGETEKLLSYFRPCIMPQPGGVASGFNHVEVNQQD 156
Query: 415 E-KRLFQIKGKRNVRVKQVKPTFESLNNGDCFILD 516
RL+ +GK V VK+V SLN+ D FILD
Sbjct: 157 HVTRLYVCQGKHVVHVKEVPFVRSSLNHEDIFILD 191
Score = 63.7 bits (148), Expect = 8e-11
Identities = 46/164 (28%), Positives = 81/164 (49%), Gaps = 13/164 (7%)
Frame = +1
Query: 61 LEIWRIENFEPVAVPKTQFGLFYSGDSYIVLNT-TGDKDRLTWDIHFWLGSRTSQDEAGA 237
L++WR+ + + Y+GD YI T TGD D+ I W G ++ +++ +
Sbjct: 409 LQVWRVNGDGKTLLSSSDQSKLYTGDCYIFQYTYTGD-DKEECLIGTWFGKKSVEEDRTS 467
Query: 238 AAILTVNLDDEQFQGSAVQHREVQYYESKEFLEYF--SPAIRYLKGGHASGFSHVTINEG 411
A ++L + FQ + Q + + YE KE +++F +++ KGG +SG+ + G
Sbjct: 468 A----ISLASKMFQAAKFQAAQARLYEGKEPIQFFVIFQSLQVFKGGLSSGYKNFIAVNG 523
Query: 412 TEK--------RLFQIK--GKRNVRVKQVKPTFESLNNGDCFIL 513
T+ LF+I+ G N++ QV SLN+ C+IL
Sbjct: 524 TDDDTYVEGGLALFRIQGSGSENMQAIQVDAVSSSLNSSYCYIL 567
>06_03_0999 -
26752410-26752523,26752601-26752830,26752914-26753169,
26753763-26753828,26753921-26754046,26754148-26754288,
26754377-26754387,26754523-26754670,26755326-26755454,
26755573-26755710,26755808-26755876,26755955-26756023,
26756565-26756720,26756885-26756985,26757068-26757215,
26757540-26757702,26757833-26757965,26758049-26758226,
26758330-26758572,26758664-26758732,26759063-26759187,
26759727-26759766,26760756-26760812,26762831-26762935
Length = 1004
Score = 153 bits (372), Expect = 6e-38
Identities = 84/155 (54%), Positives = 98/155 (63%), Gaps = 2/155 (1%)
Frame = +1
Query: 58 GLEIWRIENFEPVAVPKTQFGLFYSGDSYIVLNTTGDKD-RLTWDIHFWLGSRTSQDEAG 234
GLEIWRIE + V VPK G F++GDSY++L TT K+ DIH+WLG TSQDEAG
Sbjct: 77 GLEIWRIEKLQAVPVPKESHGRFFTGDSYVILKTTALKNGSFRHDIHYWLGKDTSQDEAG 136
Query: 235 AAAILTVNLDDEQFQGSAVQHREVQYYESKEFLEYFSPAIRYLKGGHASGFSHVTINEGT 414
AAI TV L D G AVQ+REVQ E++ FL YF P I +GG ASGF H INE
Sbjct: 137 TAAIKTVEL-DAALGGRAVQYREVQGNETERFLSYFKPCIIPEEGGIASGFRHTEINERE 195
Query: 415 E-KRLFQIKGKRNVRVKQVKPTFESLNNGDCFILD 516
RLF +GK V VK+V SLN+ D FILD
Sbjct: 196 HVTRLFVCRGKHTVHVKEVPFARSSLNHDDIFILD 230
Score = 56.8 bits (131), Expect = 1e-08
Identities = 44/163 (26%), Positives = 74/163 (45%), Gaps = 12/163 (7%)
Frame = +1
Query: 61 LEIWRIENFEPVAVPKTQFGLFYSGDSYIVLNTTGDKDRLTWDIHFWLGSRTSQDEAGAA 240
L++WR+ E + ++ FYSGD YI + ++ I W G ++ QDE A
Sbjct: 453 LQVWRVNGTEKTFLSFSEQCKFYSGDCYIFQYSYPGEEGEECLIGTWFGKKSVQDEKTTA 512
Query: 241 AILTVNLDDEQFQGSAVQHREVQYYESKEFLEYFS--PAIRYLKGGHASGFSHVTINEGT 414
+++ + + Q V+ YE KE E+FS + KGG ++G+ G
Sbjct: 513 ----ISVASKMVESLKFQAVMVRLYEGKEPAEFFSIFQNLVIFKGGVSTGYKKFVSENGI 568
Query: 415 EK--------RLFQIKGK--RNVRVKQVKPTFESLNNGDCFIL 513
E LF+++G N++ QV SLN+ C++L
Sbjct: 569 EDDTYSENGVALFRVQGSGPENMQAIQVDTAATSLNSSYCYVL 611
>08_01_0871 +
8502396-8502417,8503606-8503732,8503891-8503990,
8504725-8504793,8504870-8505043,8505196-8505373,
8505462-8505594,8505702-8505864,8507031-8507181,
8507266-8507366,8507633-8507788,8508105-8508173,
8508256-8508324,8508403-8508540,8508639-8508767,
8509013-8509053,8510019-8510106,8510199-8510339,
8510428-8510553,8510671-8510736,8510994-8511291,
8511387-8511595,8511689-8511802
Length = 953
Score = 134 bits (325), Expect = 3e-32
Identities = 66/116 (56%), Positives = 81/116 (69%), Gaps = 1/116 (0%)
Frame = +1
Query: 58 GLEIWRIENFEPVAVPKTQFGLFYSGDSYIVLNTTGDKD-RLTWDIHFWLGSRTSQDEAG 234
GLEIWRIENF+PV +P + +G F+ GDSYI+L TT K+ L DIH+W+G TSQDE+G
Sbjct: 51 GLEIWRIENFKPVPIPASSYGKFFMGDSYIILKTTALKNGSLRHDIHYWIGKDTSQDESG 110
Query: 235 AAAILTVNLDDEQFQGSAVQHREVQYYESKEFLEYFSPAIRYLKGGHASGFSHVTI 402
AAILTV L D G AVQ+RE+Q E+ +FL YF P I GG ASGF HV +
Sbjct: 111 TAAILTVEL-DAALGGRAVQYREIQGNETDKFLSYFRPCIMPQPGGVASGFKHVEV 165
Score = 58.8 bits (136), Expect = 2e-09
Identities = 50/178 (28%), Positives = 82/178 (46%), Gaps = 13/178 (7%)
Frame = +1
Query: 19 EVHQAFADAGRKPGLEIWRIENFEPVAVPKTQFGLFYSGDSYIVLNTTGDKDRLTWDIHF 198
E QA+ D L++WRI + + + +P FY+GD YI D+ I
Sbjct: 393 EEPQAYIDC--TGSLQVWRINDKDKILLPSADQSKFYTGDCYIFQYMYPGDDKEECLIGS 450
Query: 199 WLGSRT-SQDEAGAAAILTVNLDDEQFQGSAVQHREVQYYESKEFLEYF--SPAIRYLKG 369
W G ++ +D A ++ + ++ +FQ AVQ R YE KE +++F + + KG
Sbjct: 451 WFGKKSIEEDRVTAISLASKMVESAKFQ--AVQTR---LYEGKEPIQFFVIFQSFQVFKG 505
Query: 370 GHASGFSHVTINEGTEK--------RLFQIKGK--RNVRVKQVKPTFESLNNGDCFIL 513
G +SG+ G + LF+I+G N++ QV SLN+ +IL
Sbjct: 506 GLSSGYKKFIAENGIDDDTYLEDGLALFRIQGSGPENMQAIQVDAAASSLNSSYSYIL 563
>03_03_0001 +
13611070-13611172,13611812-13611873,13612001-13612072,
13612158-13612394,13612473-13612650,13612731-13612863,
13613686-13613845,13613925-13614078,13614159-13614262,
13614354-13614512,13615399-13615467,13615543-13615611,
13615772-13615909,13616044-13616124,13616805-13616933,
13617717-13617864,13618007-13618017,13618094-13618234,
13618314-13618439,13619164-13619220,13619355-13619453,
13619540-13619762,13620236-13620480,13621325-13621438
Length = 1003
Score = 114 bits (275), Expect = 3e-26
Identities = 62/111 (55%), Positives = 73/111 (65%)
Frame = +1
Query: 184 WDIHFWLGSRTSQDEAGAAAILTVNLDDEQFQGSAVQHREVQYYESKEFLEYFSPAIRYL 363
+DIHFW+G +SQDEAG AAI TV LD G AVQHRE+Q YES +FL YF P I L
Sbjct: 67 FDIHFWIGKDSSQDEAGTAAIKTVELDT-MLGGRAVQHRELQGYESDKFLSYFKPCIIPL 125
Query: 364 KGGHASGFSHVTINEGTEKRLFQIKGKRNVRVKQVKPTFESLNNGDCFILD 516
+GG ASGF + E RL+ KGKR +RVK+V SLN+ D FILD
Sbjct: 126 EGGFASGFK-TPEEDKFETRLYICKGKRAIRVKEVPFARSSLNHDDVFILD 175
Score = 62.5 bits (145), Expect = 2e-10
Identities = 42/129 (32%), Positives = 63/129 (48%), Gaps = 2/129 (1%)
Frame = +1
Query: 61 LEIWRIENFEPVAVPKTQFGLFYSGDSYIVLNT--TGDKDRLTWDIHFWLGSRTSQDEAG 234
LE++ + A+PK + G FYSGD YIVL T +GDK R + + +W+G + S E
Sbjct: 400 LEVYCVNGSAKTALPKEELGKFYSGDCYIVLYTYHSGDK-REEFYLTYWIG-KDSIPEDQ 457
Query: 235 AAAILTVNLDDEQFQGSAVQHREVQYYESKEFLEYFSPAIRYLKGGHASGFSHVTINEGT 414
A T N +G + R Q E +F+ F P + LKGG +SG+ +G
Sbjct: 458 EMAFQTANSIWNSLKGRPILGRIYQGKEPPQFIALFQPMV-ILKGGISSGYQKFVEEKGL 516
Query: 415 EKRLFQIKG 441
+ + G
Sbjct: 517 KDETYSGDG 525
>05_01_0383 +
2990812-2990855,2991364-2991463,2991554-2991622,
2991724-2991960,2992045-2992228,2992307-2992442,
2992529-2992691,2992958-2993108,2993154-2993278,
2993349-2993504,2993792-2993860,2993951-2994019,
2994127-2994264,2994626-2994773,2994856-2994866,
2995212-2995352,2995441-2995569,2995860-2995899,
2996020-2996348,2996902-2996919
Length = 818
Score = 94.7 bits (225), Expect = 4e-20
Identities = 53/169 (31%), Positives = 91/169 (53%), Gaps = 1/169 (0%)
Frame = +1
Query: 13 MPEVHQAFADAGRKPGLEIWRIENFEPVAVPKTQFGLFYSGDSYIVLNTTGDKDRL-TWD 189
M V AF G KPGL+IW I +A+ K+ G FY+G++YI+L+T K + +
Sbjct: 1 MKGVDDAFLGVGDKPGLDIWCIMGSNLIAIEKSLHGKFYTGNTYIILSTVELKSGVRQHN 60
Query: 190 IHFWLGSRTSQDEAGAAAILTVNLDDEQFQGSAVQHREVQYYESKEFLEYFSPAIRYLKG 369
+H+W+G +++ A+ + L D + VQ+RE Q ES +FL YF P I ++G
Sbjct: 61 VHYWVGEEAKEEDCLTASDKAIEL-DVALGSNTVQYRETQGEESDKFLSYFKPCIIPIQG 119
Query: 370 GHASGFSHVTINEGTEKRLFQIKGKRNVRVKQVKPTFESLNNGDCFILD 516
S + ++ + +F+ +G+ RV +V + SL++ F++D
Sbjct: 120 S-LSSHMRIYGDKSKDTTMFRCEGEHVARVTEVPFSRSSLDHKAVFVVD 167
Score = 36.3 bits (80), Expect = 0.015
Identities = 32/138 (23%), Positives = 59/138 (42%), Gaps = 1/138 (0%)
Frame = +1
Query: 61 LEIWRIENFEPVAVPKTQFGLFYSGDSYIVLNTTGDKDRLTWDIHF-WLGSRTSQDEAGA 237
L++W ++N + + Y+GD YI+ + +D + + F W G + ++ A
Sbjct: 402 LKVWLVDNGSVTLLCTEEQEQLYNGDCYII-RYSYIEDGKDYHLFFAWSGLNSINEDRVA 460
Query: 238 AAILTVNLDDEQFQGSAVQHREVQYYESKEFLEYFSPAIRYLKGGHASGFSHVTINEGTE 417
AA L + D +G AV + + E + F F I + KGG + + +
Sbjct: 461 AASLMSGMID-SVKGHAVVAQVFEGREPEMFFLVFKSLIIF-KGGRSMAYKNFVSQRSDA 518
Query: 418 KRLFQIKGKRNVRVKQVK 471
+Q G RV+ +K
Sbjct: 519 NGWYQKNGVALFRVQGLK 536
>06_01_0229 -
1757998-1758241,1758318-1758388,1758467-1758586,
1758685-1758805,1759264-1759418,1759507-1759644,
1759688-1759801
Length = 320
Score = 29.9 bits (64), Expect = 1.3
Identities = 12/41 (29%), Positives = 23/41 (56%)
Frame = +1
Query: 172 DRLTWDIHFWLGSRTSQDEAGAAAILTVNLDDEQFQGSAVQ 294
D ++WD HF T +A+L +++D ++ GS++Q
Sbjct: 155 DTISWDYHFEHAGNTPVTFTVKSAVLKESIEDLEWPGSSIQ 195
>02_05_0181 -
26522849-26522932,26523053-26523184,26523263-26523329,
26523800-26524186,26524259-26524360,26524983-26525132,
26525552-26525636,26525743-26525769,26525858-26526116,
26526659-26526751,26526921-26527013,26527122-26527289,
26527436-26527594,26528214-26528273,26528392-26528487
Length = 653
Score = 29.9 bits (64), Expect = 1.3
Identities = 28/84 (33%), Positives = 41/84 (48%), Gaps = 12/84 (14%)
Frame = +1
Query: 16 PEVHQAFADAGRKPGLEIWRIENF-EP--------VAVPKTQF--GLFYSGDS-YIVLNT 159
P+ H+ R GL+I ++ EP V+ P F G+ SG + IVL+T
Sbjct: 289 PDDHEPLLSTTRSTGLDISSSDSSDEPCNGDQVPLVSFPNNWFRLGIIPSGSTDAIVLST 348
Query: 160 TGDKDRLTWDIHFWLGSRTSQDEA 231
TG++D +T + LG R S D A
Sbjct: 349 TGERDPVTSALLIILGRRISLDIA 372
>01_01_0386 -
2985563-2985986,2986301-2986390,2986529-2986668,
2986798-2986893,2987003-2987042,2987760-2987887
Length = 305
Score = 29.1 bits (62), Expect = 2.2
Identities = 26/96 (27%), Positives = 38/96 (39%)
Frame = +2
Query: 200 GSARGPARTKPARRPSSR*TWTTNNSRDQRYSTERSNITSPRSS*NISHQPSAI*KADTP 379
G +RG + ++ R SR +SR++R S + SPR S S P D+
Sbjct: 149 GRSRGRSYSRSRSRSYSRSQSPRRDSRNERRSRSPRDSRSPRGSPRDSRSPRGS-PRDSR 207
Query: 380 QASAT*RSMREQRNDSSRSRVKETSALSR*NRHLSP 487
+ R + R SR SA R+ SP
Sbjct: 208 SPKGSPRDTQSPRGSPRDSRSPRRSASPPNGRNRSP 243
>08_02_0802 + 21386248-21387468
Length = 406
Score = 28.3 bits (60), Expect = 3.9
Identities = 11/27 (40%), Positives = 16/27 (59%)
Frame = +1
Query: 163 GDKDRLTWDIHFWLGSRTSQDEAGAAA 243
GD+ +L+WD+H WL + AAA
Sbjct: 261 GDRVQLSWDLHNWLFPQREPPTTDAAA 287
>03_03_0117 -
14583102-14583186,14585202-14585336,14585440-14585604,
14586168-14586245,14586796-14586941
Length = 202
Score = 28.3 bits (60), Expect = 3.9
Identities = 18/48 (37%), Positives = 24/48 (50%), Gaps = 1/48 (2%)
Frame = +2
Query: 215 PARTKPARRPSSR*TWTTNNSRDQRYSTERSNITSPRS-S*NISHQPS 355
P+ + R SR SR RYS RS + SPRS S + S+ P+
Sbjct: 120 PSEMRARERVGSRDRSYDRRSRSPRYSRSRSPVYSPRSRSRSRSYSPA 167
>02_01_0246 +
1617326-1617367,1618903-1624419,1625040-1625498,
1625603-1625887,1626016-1626030,1626339-1626419,
1626909-1627322,1627423-1627719,1627801-1629864
Length = 3057
Score = 28.3 bits (60), Expect = 3.9
Identities = 21/88 (23%), Positives = 44/88 (50%)
Frame = +1
Query: 205 GSRTSQDEAGAAAILTVNLDDEQFQGSAVQHREVQYYESKEFLEYFSPAIRYLKGGHASG 384
G +T +D+A TV+ +EQ QGS + ++ + +++E ++ S A HA+
Sbjct: 348 GEKTPEDDATTREP-TVDTKEEQNQGSVEEMKDAEAVDTEETVQQSSVAFDEAIQDHAAT 406
Query: 385 FSHVTINEGTEKRLFQIKGKRNVRVKQV 468
+ + + E + KG +V+ ++V
Sbjct: 407 TNPSSDIQSIEPE--ETKGPSDVKAEEV 432
>01_01_1234 -
10007446-10007940,10008030-10008125,10008980-10009253,
10009381-10009682,10010078-10010123,10010319-10010368,
10011124-10011268,10012051-10012229,10012327-10012485,
10012636-10012887,10012972-10013097,10013197-10013525,
10014183-10014252
Length = 840
Score = 28.3 bits (60), Expect = 3.9
Identities = 17/59 (28%), Positives = 26/59 (44%)
Frame = +3
Query: 21 STPSIRGCRQEAGSRNMED*ELRTGRRSEDSVRSLLLRGLLHCTEHHRR*GPSNMGHPF 197
+ PS R RQ+ G +++ + G R D LR + HRR G ++G F
Sbjct: 760 AAPSPRRDRQDGGEPHLQAAAVLAGSRGGDDAAHACLRRPSSPSPDHRRTGGDSLGFSF 818
>07_03_0689 + 20711313-20711906,20713224-20713860,20713946-20714049
Length = 444
Score = 27.9 bits (59), Expect = 5.1
Identities = 20/59 (33%), Positives = 26/59 (44%)
Frame = +2
Query: 77 LRTSNRSPFRRLSSVSSTPGTPTLY*TPQAIRTV*HGTSISGSARGPARTKPARRPSSR 253
L S R RRL+ S TPGTP +P + + SGS PA+ SS+
Sbjct: 28 LPPSPRLQGRRLTPPSCTPGTPAALPSPGPDKEPEREAAGSGSGSATTPRSPAQLGSSQ 86
>10_01_0315 -
3454846-3455465,3455562-3455663,3455828-3455954,
3456698-3456727,3456828-3456877,3457004-3457106
Length = 343
Score = 27.5 bits (58), Expect = 6.8
Identities = 13/36 (36%), Positives = 17/36 (47%)
Frame = +3
Query: 261 GRRTIPGISGTAPRGPILRVQGVPRIFLTSHPLFKR 368
G+ P T P G I+ V+G P F T H + R
Sbjct: 199 GKHITPVDENTIPTGEIMPVKGTPFDFTTEHKIGAR 234
>09_04_0124 + 14862603-14863937
Length = 444
Score = 27.1 bits (57), Expect = 8.9
Identities = 10/28 (35%), Positives = 16/28 (57%)
Frame = +1
Query: 163 GDKDRLTWDIHFWLGSRTSQDEAGAAAI 246
GD +++WD+H WL A A+A+
Sbjct: 288 GDGVQVSWDLHHWLFPNRDTAPADASAV 315
>07_03_0633 + 20120560-20123464,20123608-20123672
Length = 989
Score = 27.1 bits (57), Expect = 8.9
Identities = 9/19 (47%), Positives = 14/19 (73%)
Frame = -2
Query: 455 RTFLLPLIWKSRFSVPSLI 399
R+F P IWK+R+ +P +I
Sbjct: 460 RSFFQPTIWKNRYIMPDMI 478
>07_03_0390 + 17573653-17574089,17574250-17574280,17574397-17575134
Length = 401
Score = 27.1 bits (57), Expect = 8.9
Identities = 12/32 (37%), Positives = 16/32 (50%)
Frame = -2
Query: 455 RTFLLPLIWKSRFSVPSLIVTWLKPEACPPFK 360
RTFL + K RF V + W + E+ P K
Sbjct: 120 RTFLHAAVEKKRFGVVKYVCHWKRKESMMPLK 151
>03_05_0488 -
24847076-24847220,24847823-24847872,24848139-24848278,
24848358-24848493,24848584-24848683,24848837-24848949,
24849034-24849132,24849227-24849311,24849799-24850037,
24850202-24850372,24850544-24850784,24850899-24851172,
24851481-24851660,24852170-24852251,24852336-24852437,
24853315-24853384,24853725-24853824,24853931-24854025,
24854105-24854184,24854361-24854439,24854603-24854663,
24855570-24855984
Length = 1018
Score = 27.1 bits (57), Expect = 8.9
Identities = 16/40 (40%), Positives = 21/40 (52%)
Frame = +2
Query: 47 AGSRVSKYGGLRTSNRSPFRRLSSVSSTPGTPTLY*TPQA 166
A + V+ GGL + S +S STPGTPT+ P A
Sbjct: 23 ASASVAAQGGLASETSSSSS--ASAPSTPGTPTVAPAPAA 60
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,908,149
Number of Sequences: 37544
Number of extensions: 316787
Number of successful extensions: 911
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 870
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 897
length of database: 14,793,348
effective HSP length: 77
effective length of database: 11,902,460
effective search space used: 1118831240
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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