Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= epV30560
(516 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_24829| Best HMM Match : Gelsolin (HMM E-Value=5.8e-35) 129 1e-30
SB_24828| Best HMM Match : Peptidase_A17 (HMM E-Value=1.7e-23) 118 2e-27
SB_54820| Best HMM Match : No HMM Matches (HMM E-Value=.) 64 9e-11
SB_14143| Best HMM Match : Gelsolin (HMM E-Value=1.1e-07) 57 1e-08
SB_7860| Best HMM Match : Gelsolin (HMM E-Value=0.0032) 53 1e-07
SB_14633| Best HMM Match : LRR_1 (HMM E-Value=3.4e-12) 45 3e-05
SB_14141| Best HMM Match : HH_signal (HMM E-Value=0) 45 4e-05
SB_43866| Best HMM Match : Gelsolin (HMM E-Value=0.092) 43 1e-04
SB_38607| Best HMM Match : Gelsolin (HMM E-Value=0.0024) 38 0.005
SB_20689| Best HMM Match : Gelsolin (HMM E-Value=0.00029) 38 0.005
SB_32906| Best HMM Match : No HMM Matches (HMM E-Value=.) 38 0.006
SB_54818| Best HMM Match : No HMM Matches (HMM E-Value=.) 36 0.026
SB_31262| Best HMM Match : No HMM Matches (HMM E-Value=.) 35 0.046
SB_49838| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.43
SB_53873| Best HMM Match : Fibrinogen_C (HMM E-Value=0) 30 1.3
SB_23411| Best HMM Match : Glyco_transf_8 (HMM E-Value=8.4e-15) 30 1.3
SB_31322| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 1.7
SB_13852| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 1.7
SB_18951| Best HMM Match : EGF (HMM E-Value=2.1e-06) 29 2.3
SB_33125| Best HMM Match : Pkinase (HMM E-Value=0) 29 2.3
SB_46433| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.0
SB_59005| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 4.0
SB_32432| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 4.0
SB_3033| Best HMM Match : RRM_1 (HMM E-Value=2.3e-20) 28 4.0
SB_18300| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 4.0
SB_1050| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 4.0
SB_58364| Best HMM Match : WD40 (HMM E-Value=2.8026e-45) 28 5.3
SB_22056| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 5.3
SB_13482| Best HMM Match : Herpes_gI (HMM E-Value=0.96) 27 6.9
SB_386| Best HMM Match : zf-C2H2 (HMM E-Value=1.7e-25) 27 6.9
SB_49759| Best HMM Match : bZIP_1 (HMM E-Value=0.93) 27 9.2
SB_20599| Best HMM Match : UPF0172 (HMM E-Value=7.2) 27 9.2
SB_6195| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 9.2
>SB_24829| Best HMM Match : Gelsolin (HMM E-Value=5.8e-35)
Length = 1078
Score = 129 bits (312), Expect = 1e-30
Identities = 74/166 (44%), Positives = 99/166 (59%), Gaps = 4/166 (2%)
Frame = +1
Query: 31 AFADAGRKPGLEIWRIENFEPVAVPKTQFGLFYSGDSYIVLNT--TGDKDRLTWDIHFWL 204
A+ +AG + GL+IWRIE F+ + +G FY GDSYI+LNT +D L +D+HFW+
Sbjct: 468 AWKNAGTREGLQIWRIEKFKVKVWSREDYGSFYDGDSYIILNTYKESGEDELKYDVHFWI 527
Query: 205 GSRTSQDEAGAAAILTVNLDDEQFQGSAVQHREVQYYESKEFLEYFSPAIRYLKGGHASG 384
G ++QDE G AA TV L D +QHREVQ +ESK F YF ++ LKGG SG
Sbjct: 528 GKDSTQDEYGTAAYKTVEL-DIHLNDKPIQHREVQGFESKLFKSYFK-SLTILKGGVDSG 585
Query: 385 FSHVTINEGTEKRLFQIKGK--RNVRVKQVKPTFESLNNGDCFILD 516
F HV E + RL +++G N V++V SL + D FILD
Sbjct: 586 FRHVKPQE-YKPRLLRVRGTTVSNCVVEEVLLARSSLCSEDVFILD 630
Score = 66.5 bits (155), Expect = 1e-11
Identities = 30/58 (51%), Positives = 40/58 (68%), Gaps = 2/58 (3%)
Frame = +1
Query: 97 AVPKTQFGLFYSGDSYIVLNTTGD--KDRLTWDIHFWLGSRTSQDEAGAAAILTVNLD 264
+V + +G FY GDSYI+LNT D +D L +D+HFW+G ++QDE G AA TV LD
Sbjct: 879 SVLRDDYGKFYDGDSYIILNTYKDPEEDELKYDVHFWIGKDSTQDEYGTAAYKTVELD 936
>SB_24828| Best HMM Match : Peptidase_A17 (HMM E-Value=1.7e-23)
Length = 1531
Score = 118 bits (285), Expect = 2e-27
Identities = 63/143 (44%), Positives = 89/143 (62%), Gaps = 3/143 (2%)
Frame = +1
Query: 31 AFADAGRKPGLEIWRIENFEPVAVPKTQFGLFYSGDSYIVLNTTGDK---DRLTWDIHFW 201
A+ +AG K GL+IWRI F+ PK ++G FY+GDSYI+L T +K ++L +D+HFW
Sbjct: 513 AWKNAGEKVGLQIWRINKFKVEEWPKEKYGQFYAGDSYIILWTYEEKEDTEKLCYDLHFW 572
Query: 202 LGSRTSQDEAGAAAILTVNLDDEQFQGSAVQHREVQYYESKEFLEYFSPAIRYLKGGHAS 381
+G ++QDE G AA TV L D VQHRE+ +ES F YF +I YLKGG +
Sbjct: 573 IGRGSTQDEYGTAAYKTVEL-DTYLNDVPVQHREIMNHESDMFKTYFK-SITYLKGGAET 630
Query: 382 GFSHVTINEGTEKRLFQIKGKRN 450
GF+ V E + R+ ++ G +N
Sbjct: 631 GFNQVKPKE-YKPRILKVSGDKN 652
>SB_54820| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 313
Score = 63.7 bits (148), Expect = 9e-11
Identities = 57/180 (31%), Positives = 80/180 (44%), Gaps = 15/180 (8%)
Frame = +1
Query: 22 VHQAFADAGRKPGLEIWRIENFEPVAVPKTQFGLFYSGDSYIVLN--------TTGDKDR 177
V AF AG+KPGLEIWRIE + VA +G FYSGDSYI L+ GD
Sbjct: 3 VDDAFVQAGQKPGLEIWRIEKLKVVAQDPKTYGTFYSGDSYICLSVELHYKSLNKGDVFI 62
Query: 178 LT--WDIHFWLGSRTSQDEAGAAAILTVNLDDEQFQGSAVQH----REVQYYESKEFLEY 339
L +I+ W GS+ S+ E + + DE+ G A H + + ESK F +
Sbjct: 63 LDDGLNIYCWNGSQCSRVERMKGIDVAKRIRDEERGGRAQVHIIDECKDKGLESK-FFDA 121
Query: 340 FSPAIRYLKGGHASGFSHVTINEGTEKRLFQIKGKRNVRVKQVKPTFES-LNNGDCFILD 516
+ + + + G+ +R + KP +S L+ DCFILD
Sbjct: 122 LGSRGEIAEDLGTTRSLRKPARAPSLSTMSDASGELEMREIEAKPLKKSNLDTNDCFILD 181
>SB_14143| Best HMM Match : Gelsolin (HMM E-Value=1.1e-07)
Length = 546
Score = 56.8 bits (131), Expect = 1e-08
Identities = 33/86 (38%), Positives = 48/86 (55%), Gaps = 1/86 (1%)
Frame = +1
Query: 40 DAGRKPGLEIWRIENFEPVAVPKTQFGLFYSGDSYIVLNT-TGDKDRLTWDIHFWLGSRT 216
D GR + +R+ + V G+F+SGDSY+V+ T + + I+FW G+ +
Sbjct: 153 DDGRSKEVGFYRVTDGGKVQCNTAAKGIFFSGDSYLVVYTYRTQRGQKKSIIYFWKGNDS 212
Query: 217 SQDEAGAAAILTVNLDDEQFQGSAVQ 294
E GAAA LTV+LD+ F G AVQ
Sbjct: 213 RVFEKGAAAKLTVDLDNNNFGGDAVQ 238
>SB_7860| Best HMM Match : Gelsolin (HMM E-Value=0.0032)
Length = 675
Score = 53.2 bits (122), Expect = 1e-07
Identities = 23/47 (48%), Positives = 32/47 (68%)
Frame = +1
Query: 19 EVHQAFADAGRKPGLEIWRIENFEPVAVPKTQFGLFYSGDSYIVLNT 159
E A+ AG++ G+++WRI F+ PK +G FY+GDSYIVLNT
Sbjct: 356 EGEPAWEGAGKEVGVQVWRIVKFKVTHWPKQDYGHFYNGDSYIVLNT 402
>SB_14633| Best HMM Match : LRR_1 (HMM E-Value=3.4e-12)
Length = 446
Score = 45.2 bits (102), Expect = 3e-05
Identities = 30/73 (41%), Positives = 41/73 (56%)
Frame = +1
Query: 298 REVQYYESKEFLEYFSPAIRYLKGGHASGFSHVTINEGTEKRLFQIKGKRNVRVKQVKPT 477
RE Q ES+EF E F I Y++GG ASGF V ++ RLF++ + V ++ V P
Sbjct: 284 REEQGDESEEFHELFDNDIAYIEGGTASGFYSVE-DQIYITRLFRLLKDKRVLLEPVLPD 342
Query: 478 FESLNNGDCFILD 516
SL+ FILD
Sbjct: 343 VSSLDPTFTFILD 355
>SB_14141| Best HMM Match : HH_signal (HMM E-Value=0)
Length = 754
Score = 44.8 bits (101), Expect = 4e-05
Identities = 26/70 (37%), Positives = 34/70 (48%), Gaps = 1/70 (1%)
Frame = +1
Query: 124 FYSGDSYIVLNTTGDKDRLTWDI-HFWLGSRTSQDEAGAAAILTVNLDDEQFQGSAVQHR 300
FY GDSY++L+ DK + H G S DE AA + +DDE F G A Q
Sbjct: 677 FYDGDSYVILDYRKDKTNKKQPVLHILHGKNASTDELFFAATKAIAIDDEYFGGKAKQTV 736
Query: 301 EVQYYESKEF 330
+V E +F
Sbjct: 737 QVCCREKVQF 746
>SB_43866| Best HMM Match : Gelsolin (HMM E-Value=0.092)
Length = 341
Score = 43.2 bits (97), Expect = 1e-04
Identities = 22/55 (40%), Positives = 33/55 (60%)
Frame = +1
Query: 178 LTWDIHFWLGSRTSQDEAGAAAILTVNLDDEQFQGSAVQHREVQYYESKEFLEYF 342
L ++HFW+GS S +E AA V L + +G VQ+RE + YE++EF + F
Sbjct: 19 LLHNLHFWVGSECSAEEYCTAAYKAVEL-FVKLEGKPVQYREAEGYETEEFRKCF 72
>SB_38607| Best HMM Match : Gelsolin (HMM E-Value=0.0024)
Length = 693
Score = 37.9 bits (84), Expect = 0.005
Identities = 24/89 (26%), Positives = 40/89 (44%), Gaps = 17/89 (19%)
Frame = +1
Query: 58 GLEIWRIENFEPVAVPKTQFGLFYSGDSYIVL---------NTTGDKDRLTWDI------ 192
G+ +W I + +P G F+SG+ Y++ T K R +
Sbjct: 220 GVTVWHINEYRHYELPNENHGHFHSGEGYVIRWAYFVMTDRIATDRKSRCRSTVAGRVRT 279
Query: 193 --HFWLGSRTSQDEAGAAAILTVNLDDEQ 273
FW G+ + +E GAAA++ V LD+E+
Sbjct: 280 AYFFWQGNDCTVNEKGAAAVMAVELDEER 308
>SB_20689| Best HMM Match : Gelsolin (HMM E-Value=0.00029)
Length = 1866
Score = 37.9 bits (84), Expect = 0.005
Identities = 24/89 (26%), Positives = 40/89 (44%), Gaps = 17/89 (19%)
Frame = +1
Query: 58 GLEIWRIENFEPVAVPKTQFGLFYSGDSYIVL---------NTTGDKDRLTWDI------ 192
G+ +W I + +P G F+SG+ Y++ T K R +
Sbjct: 1775 GVTVWHINEYRHYELPNENHGHFHSGEGYVIRWAYFVMTDRIATDRKSRCRSTVAGRVRT 1834
Query: 193 --HFWLGSRTSQDEAGAAAILTVNLDDEQ 273
FW G+ + +E GAAA++ V LD+E+
Sbjct: 1835 AYFFWQGNDCTVNEKGAAAVMAVELDEER 1863
Score = 35.1 bits (77), Expect = 0.035
Identities = 14/46 (30%), Positives = 27/46 (58%)
Frame = +1
Query: 376 ASGFSHVTINEGTEKRLFQIKGKRNVRVKQVKPTFESLNNGDCFIL 513
AS + + E K + G+RN++ + ++P +S N+GDC++L
Sbjct: 1436 ASALAGLASTEDFTKISLRKTGRRNIQTRLIEPCQKSFNSGDCYVL 1481
>SB_32906| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 770
Score = 37.5 bits (83), Expect = 0.006
Identities = 19/63 (30%), Positives = 31/63 (49%)
Frame = +1
Query: 196 FWLGSRTSQDEAGAAAILTVNLDDEQFQGSAVQHREVQYYESKEFLEYFSPAIRYLKGGH 375
FW G ++ +E GAAA++TV +D E+ +H ++ F Y + + GH
Sbjct: 197 FWQGHDSTVNEKGAAALMTVEIDSEKGPQITFKHTVTVRFDIDTFFIYRECSCFFYCDGH 256
Query: 376 ASG 384
A G
Sbjct: 257 ALG 259
>SB_54818| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 251
Score = 35.5 bits (78), Expect = 0.026
Identities = 22/64 (34%), Positives = 32/64 (50%), Gaps = 4/64 (6%)
Frame = +1
Query: 292 QHREVQYYESKEFLEYFSPAIRYLKGGHASGFSHVTINEGT----EKRLFQIKGKRNVRV 459
Q R VQY E + FL F + L+GG +GF E T KR+F +KG ++
Sbjct: 38 QVRVVQYKEPEHFLRIFRGRLIILEGGKGAGF-RAGCEEDTYDHEGKRMFHVKGTTDLNA 96
Query: 460 KQVK 471
K ++
Sbjct: 97 KAIQ 100
>SB_31262| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 358
Score = 34.7 bits (76), Expect = 0.046
Identities = 32/88 (36%), Positives = 42/88 (47%), Gaps = 2/88 (2%)
Frame = +2
Query: 80 RTSNRSPFRRLSSVSSTPGTPTLY*TPQAIRTV*HGTSISGSARGPARTKPARRPSSR*T 259
R++ RS R + STP TP+ TP I T +S GSARG A+T +
Sbjct: 206 RSTPRSRSRSRARTPSTPSTPSTPSTPSTITTSSRASS-RGSARGGAKTTKTTKKC---- 260
Query: 260 WTTNNSRDQR--YSTERSNITSPRSS*N 337
TT SR Q +T+ IT+ R S N
Sbjct: 261 -TTCKSRGQNGDTTTKTKCITTRRVSGN 287
>SB_49838| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 65
Score = 31.5 bits (68), Expect = 0.43
Identities = 12/26 (46%), Positives = 19/26 (73%)
Frame = +1
Query: 196 FWLGSRTSQDEAGAAAILTVNLDDEQ 273
FW G ++ +E GAAA++TV +D E+
Sbjct: 37 FWQGHDSTVNEKGAAALMTVEIDSEK 62
>SB_53873| Best HMM Match : Fibrinogen_C (HMM E-Value=0)
Length = 660
Score = 29.9 bits (64), Expect = 1.3
Identities = 17/42 (40%), Positives = 22/42 (52%)
Frame = +3
Query: 270 TIPGISGTAPRGPILRVQGVPRIFLTSHPLFKRRTRLRLQPR 395
T+ +SG A L+V+G PRI L S P+F R PR
Sbjct: 252 TVDSVSGMARALVTLKVRGAPRINLDSGPVFAVRGENITLPR 293
>SB_23411| Best HMM Match : Glyco_transf_8 (HMM E-Value=8.4e-15)
Length = 582
Score = 29.9 bits (64), Expect = 1.3
Identities = 28/82 (34%), Positives = 37/82 (45%), Gaps = 3/82 (3%)
Frame = +2
Query: 230 PARRPSSR*TWTTNNSRDQRYS-TERSNITSPRSS*NISHQPSAI*KADTPQASAT*RSM 406
P+ PSS ++ N RD R S R+N+ +S N+ PS+ D+P AS R
Sbjct: 116 PSSHPSSN-YMSSRNPRDSRNSPASRNNLRESPTSCNVRDSPSSRNPRDSP-ASRNPRDS 173
Query: 407 REQRN--DSSRSRVKETSALSR 466
N DS SR S SR
Sbjct: 174 PSSCNVRDSPSSRNPRDSPASR 195
>SB_31322| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 563
Score = 29.5 bits (63), Expect = 1.7
Identities = 17/60 (28%), Positives = 27/60 (45%)
Frame = -1
Query: 255 HREDGRRAGFVLAGPRAEPEMDVPC*TVLIACGVQYNVGVPGVEETELSLRNGDRFEVLN 76
HR+ +R F PE D+P T + + V P +E E + N +RFE ++
Sbjct: 130 HRKSAQRGPFHRPRDLLHPEGDIPDNTTSKTSYITHEVSPPKKKEPEKYVPNPNRFETVS 189
>SB_13852| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 846
Score = 29.5 bits (63), Expect = 1.7
Identities = 27/101 (26%), Positives = 42/101 (41%)
Frame = +2
Query: 47 AGSRVSKYGGLRTSNRSPFRRLSSVSSTPGTPTLY*TPQAIRTV*HGTSISGSARGPART 226
+G V++ RTS S S S+PGT TP A + + +SG+A
Sbjct: 682 SGQEVTRSHTGRTSRASGESPTSIYVSSPGTNMSESTPSAGQRL-----VSGAAEAALNA 736
Query: 227 KPARRPSSR*TWTTNNSRDQRYSTERSNITSPRSS*NISHQ 349
R +S+ W T + + R +S +SS N S +
Sbjct: 737 LRTGRVTSQAEWETGENSKKNRERSRERKSSGKSSENSSEK 777
>SB_18951| Best HMM Match : EGF (HMM E-Value=2.1e-06)
Length = 1223
Score = 29.1 bits (62), Expect = 2.3
Identities = 20/63 (31%), Positives = 34/63 (53%)
Frame = +2
Query: 278 RDQRYSTERSNITSPRSS*NISHQPSAI*KADTPQASAT*RSMREQRNDSSRSRVKETSA 457
+D+ T++ +TSPR++ S P A +A +P+ ++ S R RN S +S K +
Sbjct: 312 QDKAIGTDQPEVTSPRATPRAS--PRASPRA-SPRDQSSHSSPRNSRNSSRKSSPKPSPR 368
Query: 458 LSR 466
SR
Sbjct: 369 SSR 371
>SB_33125| Best HMM Match : Pkinase (HMM E-Value=0)
Length = 937
Score = 29.1 bits (62), Expect = 2.3
Identities = 28/95 (29%), Positives = 44/95 (46%), Gaps = 4/95 (4%)
Frame = +2
Query: 185 GTSISGSARGPARTKPARRPSSR*TWTTNNSRDQRYSTERSNITSPRSS*NIS-HQPSAI 361
GTS G AR PAR P +P+ T S +T + + P S+ N + PS+
Sbjct: 583 GTSTEGPARPPARPPPTAKPAVNRLSPTRRSLPP-VATHQEDRYRPGSTPNSNIPVPSSR 641
Query: 362 *KADTPQASAT*RS---MREQRNDSSRSRVKETSA 457
A A +T S R+++ D SR ++T++
Sbjct: 642 LGARNMAARSTFHSGERPRDRQRDEGLSRAQDTNS 676
>SB_46433| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1011
Score = 28.7 bits (61), Expect = 3.0
Identities = 22/83 (26%), Positives = 40/83 (48%), Gaps = 3/83 (3%)
Frame = +1
Query: 235 AAAILTVNLDDEQFQGSAVQHREVQYYESKEFLEYF-SPAIRYLKGGHASG--FSHVTIN 405
AA L + L+ E+FQG+ +R+ +S + +EYF +PA + K S ++
Sbjct: 165 AAQKLQMFLESEEFQGALQLNRDAATTKSSDKVEYFINPAFQLEKTSSTDVKLISFKSLE 224
Query: 406 EGTEKRLFQIKGKRNVRVKQVKP 474
E E+R + + + + KP
Sbjct: 225 EKEERRKLCVPLQATLDKNRFKP 247
>SB_59005| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 917
Score = 28.3 bits (60), Expect = 4.0
Identities = 25/76 (32%), Positives = 32/76 (42%)
Frame = +2
Query: 77 LRTSNRSPFRRLSSVSSTPGTPTLY*TPQAIRTV*HGTSISGSARGPARTKPARRPSSR* 256
LR+S P +SV T P +RT S+ SA P+ A RP
Sbjct: 474 LRSSVEGPSSNKTSVEWPSSVRTSSERPLPVRTSAERPSLRTSAERPSLRTSAERPLPVR 533
Query: 257 TWTTNNSRDQRYSTER 304
T +T+ S R STER
Sbjct: 534 T-STDTSSSFRSSTER 548
>SB_32432| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 548
Score = 28.3 bits (60), Expect = 4.0
Identities = 20/77 (25%), Positives = 33/77 (42%), Gaps = 1/77 (1%)
Frame = +1
Query: 229 AGAAAILTVNLDDEQFQGSAVQHREVQYYESKEFLEYFSP-AIRYLKGGHASGFSHVTIN 405
AG A +T +L + S + ++ E K + P A + L+GG SH+T
Sbjct: 115 AGCADKITQHLKERLDAVSGILDVALEILEDKALVALQGPKAAQVLQGGVDGDLSHLTFM 174
Query: 406 EGTEKRLFQIKGKRNVR 456
G ++ +K R R
Sbjct: 175 HGVSTSVYGLKDVRVTR 191
>SB_3033| Best HMM Match : RRM_1 (HMM E-Value=2.3e-20)
Length = 1313
Score = 28.3 bits (60), Expect = 4.0
Identities = 26/85 (30%), Positives = 43/85 (50%), Gaps = 4/85 (4%)
Frame = +2
Query: 209 RGPARTKPARRPSSR*TWTTNNSRDQRY----STERSNITSPRSS*NISHQPSAI*KADT 376
R + KPARR SS + ++++S Y ST S+ S RSS + S SA +
Sbjct: 999 RKDKKDKPARRQSSSSSSSSSSSGSSSYSSSSSTGSSSSGSSRSSSSSSSGSSASSSSSG 1058
Query: 377 PQASAT*RSMREQRNDSSRSRVKET 451
A+ + ++E + + S+ VKE+
Sbjct: 1059 NDAAKVKKEVKEAKGE-SKEVVKES 1082
>SB_18300| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 365
Score = 28.3 bits (60), Expect = 4.0
Identities = 17/38 (44%), Positives = 19/38 (50%)
Frame = +2
Query: 401 SMREQRNDSSRSRVKETSALSR*NRHLSP*TTGTASFW 514
S REQ +DSSR SR +RH P GT S W
Sbjct: 107 SPREQTSDSSRPGTPVKGTNSRTSRHTQP--RGTLSSW 142
>SB_1050| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 674
Score = 28.3 bits (60), Expect = 4.0
Identities = 14/43 (32%), Positives = 19/43 (44%)
Frame = -2
Query: 272 CSSSKFTVRMAAAPASSWLVLEPSQKWMSHVRRSLSPVVFSTM 144
C F R+ W+ P++ S S+SPV FSTM
Sbjct: 295 CLKKDFIGRIVPLLVDCWIESNPAEMSTSLPSSSISPVAFSTM 337
>SB_58364| Best HMM Match : WD40 (HMM E-Value=2.8026e-45)
Length = 426
Score = 27.9 bits (59), Expect = 5.3
Identities = 11/26 (42%), Positives = 16/26 (61%)
Frame = +1
Query: 115 FGLFYSGDSYIVLNTTGDKDRLTWDI 192
+GL +S DS +L +GDK W+I
Sbjct: 209 YGLSWSDDSKFILTASGDKSCKIWNI 234
>SB_22056| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 481
Score = 27.9 bits (59), Expect = 5.3
Identities = 19/54 (35%), Positives = 31/54 (57%), Gaps = 3/54 (5%)
Frame = +2
Query: 290 YSTERSNITSPRSS*NISHQP---SAI*KADTPQASAT*RSMREQRNDSSRSRV 442
+S ERSN T+ S+ N SH P SA +D P++SA + ++ S +++V
Sbjct: 46 FSGERSNCTASNSATNASHGPSEMSARAGSDFPKSSAKYPTFDPKKFKSMQAKV 99
>SB_13482| Best HMM Match : Herpes_gI (HMM E-Value=0.96)
Length = 461
Score = 27.5 bits (58), Expect = 6.9
Identities = 13/30 (43%), Positives = 18/30 (60%)
Frame = +2
Query: 227 KPARRPSSR*TWTTNNSRDQRYSTERSNIT 316
K + R S TW+TN+ DQR + S+IT
Sbjct: 202 KKSVRRGSMGTWSTNSYEDQRILSSTSSIT 231
>SB_386| Best HMM Match : zf-C2H2 (HMM E-Value=1.7e-25)
Length = 669
Score = 27.5 bits (58), Expect = 6.9
Identities = 13/37 (35%), Positives = 20/37 (54%)
Frame = +3
Query: 96 RRSEDSVRSLLLRGLLHCTEHHRR*GPSNMGHPFLAR 206
R ED++ SL + + +CT H R S++ H L R
Sbjct: 32 RAREDAIESLQVSHITYCTVHRRNRVASSVTHHVLHR 68
>SB_49759| Best HMM Match : bZIP_1 (HMM E-Value=0.93)
Length = 316
Score = 27.1 bits (57), Expect = 9.2
Identities = 25/95 (26%), Positives = 39/95 (41%)
Frame = +2
Query: 47 AGSRVSKYGGLRTSNRSPFRRLSSVSSTPGTPTLY*TPQAIRTV*HGTSISGSARGPART 226
+G V++ RTS S S S+PGT TP A + + +SG+A
Sbjct: 152 SGQEVTRSHTGRTSRASGESPTSIYVSSPGTNMSESTPTAGQRL-----VSGAAEAALNA 206
Query: 227 KPARRPSSR*TWTTNNSRDQRYSTERSNITSPRSS 331
R +S+ W T + + R +S +SS
Sbjct: 207 LRTGRVTSQAEWETGENSKKNRERSRERKSSGKSS 241
>SB_20599| Best HMM Match : UPF0172 (HMM E-Value=7.2)
Length = 480
Score = 27.1 bits (57), Expect = 9.2
Identities = 13/43 (30%), Positives = 18/43 (41%)
Frame = +1
Query: 118 GLFYSGDSYIVLNTTGDKDRLTWDIHFWLGSRTSQDEAGAAAI 246
G SG +V+ T G+KD +D W EAG +
Sbjct: 303 GACASGGWTLVMKTDGNKDTFRYDSTLWTNKDEFNPEAGKTGL 345
>SB_6195| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 104
Score = 27.1 bits (57), Expect = 9.2
Identities = 12/16 (75%), Positives = 12/16 (75%)
Frame = +2
Query: 20 KYTKHSRMPAGSRVSK 67
KYTKHSR AGSR K
Sbjct: 44 KYTKHSRSIAGSREKK 59
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,678,004
Number of Sequences: 59808
Number of extensions: 341232
Number of successful extensions: 976
Number of sequences better than 10.0: 33
Number of HSP's better than 10.0 without gapping: 902
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 961
length of database: 16,821,457
effective HSP length: 77
effective length of database: 12,216,241
effective search space used: 1148326654
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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