Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= epV30560
(516 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z70755-3|CAA94782.1| 475|Caenorhabditis elegans Hypothetical pr... 153 9e-38
U01183-1|AAC03567.1| 1257|Caenorhabditis elegans flightless-I ho... 82 2e-16
L07143-3|AAB37088.2| 1257|Caenorhabditis elegans Fli-i (drosophi... 82 2e-16
U88311-8|AAB42341.2| 918|Caenorhabditis elegans Hypothetical pr... 35 0.040
AC024824-3|AAK85501.1| 543|Caenorhabditis elegans Hypothetical ... 29 1.5
Z72518-2|CAA96700.1| 613|Caenorhabditis elegans Hypothetical pr... 28 3.4
U64857-15|AAC25858.1| 470|Caenorhabditis elegans Hypothetical p... 28 3.4
U41540-5|AAK39229.2| 666|Caenorhabditis elegans Hypothetical pr... 28 4.6
Z83123-5|CAB05611.1| 332|Caenorhabditis elegans Hypothetical pr... 27 8.0
>Z70755-3|CAA94782.1| 475|Caenorhabditis elegans Hypothetical
protein K06A4.3 protein.
Length = 475
Score = 153 bits (370), Expect = 9e-38
Identities = 80/163 (49%), Positives = 96/163 (58%), Gaps = 1/163 (0%)
Frame = +1
Query: 31 AFADAGRKPGLEIWRIENFEPVAVPKTQFGLFYSGDSYIVLNTTGDKDRLTWDIHFWLGS 210
A A+ G+K GL +WRI F VP+ G+FY GD+YI L D WD+HFWLG
Sbjct: 9 ALAEIGKKNGLLVWRINKFVLEPVPEVDHGVFYIGDAYIALYQKYDG---CWDVHFWLGK 65
Query: 211 RTSQDEAGAAAILTVNLDDEQFQGSAVQHREVQYYESKEFLEYFSPAIRYLKGGHASGFS 390
S DE G AAI TV +DD G QHRE+Q YES FL YF IRY+ GG+ SG+
Sbjct: 66 NASTDEIGVAAIKTVEIDDS-LGGIPTQHREIQNYESPLFLSYFPDGIRYVSGGYESGYR 124
Query: 391 HVTIN-EGTEKRLFQIKGKRNVRVKQVKPTFESLNNGDCFILD 516
HV + + LF KGKRNVR +V+ SLN GD FILD
Sbjct: 125 HVDDQFKNWKPHLFHCKGKRNVRCTEVECEVNSLNLGDVFILD 167
>U01183-1|AAC03567.1| 1257|Caenorhabditis elegans flightless-I
homolog protein.
Length = 1257
Score = 82.2 bits (194), Expect = 2e-16
Identities = 55/163 (33%), Positives = 82/163 (50%), Gaps = 4/163 (2%)
Frame = +1
Query: 40 DAGRKPGLEIWRIENFEPVAVPKTQFGLFYSGDSYIVLNTTGD-KDRLTWDIHFWLGSRT 216
D G G+ +W IENF P + + G FY D+Y+VL TT + +L I +WLG
Sbjct: 503 DVGSDEGMWVWEIENFYPSIMDEAFHGQFYDADAYLVLKTTREASGQLRHAIFYWLGEHA 562
Query: 217 SQDEAGAAAILTVNLDDEQFQGSAVQHREVQYYESKEFLEYFSPAIRYLKGGHA-SGFSH 393
S D+ +A+ V L + + RE E++EFL F I Y++GG SGF +
Sbjct: 563 SLDKGMCSAVHAVGLRN-HLNATCRTQREEMNDETEEFLTLFGEEIVYIEGGRTISGF-Y 620
Query: 394 VTINEGTEKRLFQ--IKGKRNVRVKQVKPTFESLNNGDCFILD 516
T RL++ + G V ++ V + ESL+ CF+LD
Sbjct: 621 TTEKPAHLTRLYRAGVNGTA-VEMEPVPLSVESLDPRFCFLLD 662
Score = 28.3 bits (60), Expect = 3.4
Identities = 11/31 (35%), Positives = 21/31 (67%)
Frame = +1
Query: 61 LEIWRIENFEPVAVPKTQFGLFYSGDSYIVL 153
+E + +E + V +P+ +FG+FY+ D Y+ L
Sbjct: 903 MESFVLEGKKFVKLPQKEFGIFYTMDCYVFL 933
>L07143-3|AAB37088.2| 1257|Caenorhabditis elegans Fli-i (drosophila
flightless) homologprotein 1 protein.
Length = 1257
Score = 82.2 bits (194), Expect = 2e-16
Identities = 55/163 (33%), Positives = 82/163 (50%), Gaps = 4/163 (2%)
Frame = +1
Query: 40 DAGRKPGLEIWRIENFEPVAVPKTQFGLFYSGDSYIVLNTTGD-KDRLTWDIHFWLGSRT 216
D G G+ +W IENF P + + G FY D+Y+VL TT + +L I +WLG
Sbjct: 503 DVGSDEGMWVWEIENFYPSIMDEAFHGQFYDADAYLVLKTTREASGQLRHAIFYWLGEHA 562
Query: 217 SQDEAGAAAILTVNLDDEQFQGSAVQHREVQYYESKEFLEYFSPAIRYLKGGHA-SGFSH 393
S D+ +A+ V L + + RE E++EFL F I Y++GG SGF +
Sbjct: 563 SLDKGMCSAVHAVGLRN-HLNATCRTQREEMNDETEEFLTLFGEEIVYIEGGRTISGF-Y 620
Query: 394 VTINEGTEKRLFQ--IKGKRNVRVKQVKPTFESLNNGDCFILD 516
T RL++ + G V ++ V + ESL+ CF+LD
Sbjct: 621 TTEKPAHLTRLYRAGVNGTA-VEMEPVPLSVESLDPRFCFLLD 662
Score = 28.3 bits (60), Expect = 3.4
Identities = 11/31 (35%), Positives = 21/31 (67%)
Frame = +1
Query: 61 LEIWRIENFEPVAVPKTQFGLFYSGDSYIVL 153
+E + +E + V +P+ +FG+FY+ D Y+ L
Sbjct: 903 MESFVLEGKKFVKLPQKEFGIFYTMDCYVFL 933
>U88311-8|AAB42341.2| 918|Caenorhabditis elegans Hypothetical
protein C10H11.1 protein.
Length = 918
Score = 34.7 bits (76), Expect = 0.040
Identities = 24/86 (27%), Positives = 41/86 (47%), Gaps = 3/86 (3%)
Frame = +1
Query: 265 DEQFQGSAVQHREVQYY---ESKEFLEYFSPAIRYLKGGHASGFSHVTINEGTEKRLFQI 435
DE+ + AV+ E + E E LE AI ++G S ++ + L Q+
Sbjct: 165 DERIRLDAVKIDEEAFAVVEEEPEKLETQEQAIAAIQGAKQLLKSPTKVSPYPDVMLIQV 224
Query: 436 KGKRNVRVKQVKPTFESLNNGDCFIL 513
+G +NV V+ V P S++ CF++
Sbjct: 225 RGSKNVDVRLVAPAMSSVHEVACFVV 250
>AC024824-3|AAK85501.1| 543|Caenorhabditis elegans Hypothetical
protein Y55B1BR.1 protein.
Length = 543
Score = 29.5 bits (63), Expect = 1.5
Identities = 12/22 (54%), Positives = 15/22 (68%)
Frame = +2
Query: 95 SPFRRLSSVSSTPGTPTLY*TP 160
SP +R SSV + PGTP +Y P
Sbjct: 105 SPRKRFSSVETNPGTPRIYLPP 126
>Z72518-2|CAA96700.1| 613|Caenorhabditis elegans Hypothetical
protein ZC374.2 protein.
Length = 613
Score = 28.3 bits (60), Expect = 3.4
Identities = 15/46 (32%), Positives = 23/46 (50%), Gaps = 2/46 (4%)
Frame = +3
Query: 261 GRRTIPGISGTAPRGPILRVQG--VPRIFLTSHPLFKRRTRLRLQP 392
G +P S AP GPI+ G VP + T++ + +L+ QP
Sbjct: 167 GHHQVPAQSPIAPAGPIVNTPGSLVPPLHFTANIMNPTTVQLKWQP 212
>U64857-15|AAC25858.1| 470|Caenorhabditis elegans Hypothetical
protein C37C3.1 protein.
Length = 470
Score = 28.3 bits (60), Expect = 3.4
Identities = 45/167 (26%), Positives = 68/167 (40%), Gaps = 14/167 (8%)
Frame = +2
Query: 20 KYTKHSRMPAGSRVSKYGGLRTSNRSPFRRLSSVSSTPG--TPTLY*TPQAIRTV*H--G 187
K T HS + R + R+ ++SP RR S S G TP + ++ T G
Sbjct: 286 KSTSHSTSLSKRRYLRSRS-RSLSKSPARRRSRHLSRSGSRTPAQRHSRRSESTSRRRSG 344
Query: 188 TSISGSARGPARTKPARRPSSR-------*TWTTNNSRDQRYSTERSNIT---SPRSS*N 337
+R P R +P RR SR WT SR + + S +T SP S +
Sbjct: 345 RHSRSRSRSPPRKRPVRRSRSRSRSRTPNRNWTRARSRTRSQAKSSSTLTWPLSPSRSRS 404
Query: 338 ISHQPSAI*KADTPQASAT*RSMREQRNDSSRSRVKETSALSR*NRH 478
S++ + K D + + R+ + S + R K + SR RH
Sbjct: 405 NSNERNLKEKKDRKKKKS--EKKRKHHSKSRKHRSKRSE--SREERH 447
>U41540-5|AAK39229.2| 666|Caenorhabditis elegans Hypothetical
protein F35H12.4 protein.
Length = 666
Score = 27.9 bits (59), Expect = 4.6
Identities = 11/17 (64%), Positives = 14/17 (82%)
Frame = +3
Query: 117 RSLLLRGLLHCTEHHRR 167
+SLLLRGL+ +HHRR
Sbjct: 579 KSLLLRGLMAARKHHRR 595
>Z83123-5|CAB05611.1| 332|Caenorhabditis elegans Hypothetical
protein T04A11.8 protein.
Length = 332
Score = 27.1 bits (57), Expect = 8.0
Identities = 14/37 (37%), Positives = 22/37 (59%), Gaps = 3/37 (8%)
Frame = +3
Query: 297 PRGPILRVQGVPRIFLTSHPLFKRR---TRLRLQPRD 398
P G L + VP +F +HP FKR+ +R+ + PR+
Sbjct: 291 PFGYDLELCVVPLVFYFTHPAFKRKKSESRISVNPRN 327
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,149,701
Number of Sequences: 27780
Number of extensions: 255071
Number of successful extensions: 726
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 701
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 721
length of database: 12,740,198
effective HSP length: 77
effective length of database: 10,601,138
effective search space used: 996506972
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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