Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= epV30557
(516 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
12_02_1200 + 26937624-26937674,26937913-26938005,26938582-269387... 192 1e-49
08_02_1441 - 27116242-27116354,27116646-27116742,27116841-271170... 190 6e-49
02_05_0835 - 32099966-32100111,32100418-32100465,32100673-321007... 32 0.24
07_03_0151 - 14465479-14465675,14466280-14466401,14466934-144670... 30 0.96
05_04_0299 - 19958776-19958858,19958883-19959012,19960131-199601... 29 1.7
03_05_1014 - 29687343-29687410,29688054-29688191,29689246-296892... 29 1.7
01_06_1193 - 35306608-35306777,35306869-35306890,35306988-353069... 29 1.7
05_03_0633 + 16416913-16417009,16417976-16418060,16418398-164185... 29 2.2
12_02_0604 + 20920609-20922144 28 3.9
07_03_0551 + 19374405-19374541,19375201-19375435,19375539-193757... 28 3.9
03_01_0423 + 3240224-3240394,3241464-3241628,3242322-3242339,324... 28 3.9
03_01_0040 - 353861-353981,354618-354730,355034-355129,355406-35... 28 3.9
04_04_1111 - 30979334-30979479,30979769-30979866,30980364-309804... 28 5.1
10_08_0683 - 19860777-19861070,19861677-19861874,19862498-198626... 27 8.9
06_03_1068 - 27341103-27341444,27341689-27341929,27342030-273423... 27 8.9
05_03_0582 - 15738503-15739301,15739385-15739642,15740585-157406... 27 8.9
>12_02_1200 +
26937624-26937674,26937913-26938005,26938582-26938728,
26940299-26940379,26940711-26940849,26940977-26941013,
26941095-26941202,26941434-26941533,26941638-26941783,
26941862-26941953,26942086-26942180,26942435-26942531,
26942623-26942766,26942912-26943129,26943213-26943323
Length = 552
Score = 192 bits (469), Expect = 1e-49
Identities = 91/152 (59%), Positives = 115/152 (75%)
Frame = +2
Query: 59 EQTVPPTIPVAELFPDGNFPEGQIMDHGPAEGIDERTAKNRFTSEEKRALDRLHKDIYQE 238
+QT PP+IP+ ELFP G+FPEG+I + D+ R TSEEKR L+RL K +Y
Sbjct: 190 QQTDPPSIPIDELFPSGDFPEGEIQQYK-----DDNLW--RTTSEEKRELERLQKPMYNA 242
Query: 239 IRHAAEAHRQTRKHIRNWIKPGMTMIDICEELEKTARRLIGEDGLKAGLAFPTGCSRNHC 418
+R AAE HRQ RKH+R+ +KPGM MID+CE LE R+LI E+GL+AG+AFPTGCS N
Sbjct: 243 VRRAAEVHRQVRKHMRSILKPGMLMIDLCETLENMVRKLIKENGLQAGIAFPTGCSLNWV 302
Query: 419 AAHYTPNTGDTTVLEYDDVVKIDFGTHINGRI 514
AAH+TPN+GD TVL+YDDV+K+DFGTHI+G I
Sbjct: 303 AAHWTPNSGDKTVLQYDDVMKLDFGTHIDGYI 334
>08_02_1441 -
27116242-27116354,27116646-27116742,27116841-27117058,
27117279-27117422,27117512-27117608,27117932-27118026,
27118140-27118231,27118326-27118471,27118565-27118664,
27118857-27118964,27119040-27119085,27119210-27119345,
27119847-27120044
Length = 529
Score = 190 bits (463), Expect = 6e-49
Identities = 92/152 (60%), Positives = 113/152 (74%)
Frame = +2
Query: 59 EQTVPPTIPVAELFPDGNFPEGQIMDHGPAEGIDERTAKNRFTSEEKRALDRLHKDIYQE 238
+QT PP+IPV ELFP G FPEG+I + D+ R TSEEKR L+RL K +Y
Sbjct: 134 QQTDPPSIPVDELFPSGEFPEGEIQHYK-----DDNLW--RTTSEEKRELERLQKPMYNA 186
Query: 239 IRHAAEAHRQTRKHIRNWIKPGMTMIDICEELEKTARRLIGEDGLKAGLAFPTGCSRNHC 418
+R AAE HRQ RK++R+ +KPGM MID+CE LE R+LI E+GL+AG+AFPTGCS N
Sbjct: 187 VRRAAEVHRQVRKYMRSILKPGMLMIDLCETLENMVRKLIKENGLEAGIAFPTGCSLNCV 246
Query: 419 AAHYTPNTGDTTVLEYDDVVKIDFGTHINGRI 514
AAH+TPN GD TVL+YDDV+K+DFGTHING I
Sbjct: 247 AAHWTPNGGDKTVLQYDDVMKLDFGTHINGYI 278
>02_05_0835 -
32099966-32100111,32100418-32100465,32100673-32100770,
32101269-32101348,32101615-32101686,32102260-32102301,
32102382-32102543,32102971-32103199,32103681-32103747,
32103907-32104003
Length = 346
Score = 32.3 bits (70), Expect = 0.24
Identities = 26/96 (27%), Positives = 44/96 (45%), Gaps = 6/96 (6%)
Frame = +2
Query: 239 IRHAAEAHRQTRKHIRNWIKPGMTMIDICEELEKTARRLIGEDGLKAG----LAFPTG-C 403
+R + + Q K ++PG+T +E++K ++I ++G FP C
Sbjct: 112 MRASGKLAAQVLKFAGTLVEPGITT----DEIDKAVHQMIVDNGAYPSPLGYCGFPKSVC 167
Query: 404 -SRNHCAAHYTPNTGDTTVLEYDDVVKIDFGTHING 508
S N C H P D+ LE D++ ID ++NG
Sbjct: 168 TSVNECICHGIP---DSRPLEDGDIINIDVTVYLNG 200
>07_03_0151 -
14465479-14465675,14466280-14466401,14466934-14467081,
14467146-14467167,14467299-14467393,14467395-14467438,
14467750-14467841,14467911-14467982,14468188-14468229,
14468333-14468494,14468631-14468683,14468808-14468925,
14468974-14469150,14469573-14469639,14470195-14470273,
14473805-14473862,14474257-14474346,14474429-14474540,
14474649-14474912,14475361-14475463,14476200-14476278,
14476748-14476852
Length = 766
Score = 30.3 bits (65), Expect = 0.96
Identities = 28/98 (28%), Positives = 45/98 (45%), Gaps = 7/98 (7%)
Frame = +2
Query: 236 EIRHAA-EAHRQTRKHIRNWIKPGMTMIDICEELEKTARRLIGEDGLKAGL----AFPTG 400
E RHAA E + ++ +KP T +E+++ ++I + G FP
Sbjct: 414 EARHAACELTARVLEYAGTLVKPLATT----DEIDRAVHQMIIDAGAYPSPLGYGGFPKS 469
Query: 401 -C-SRNHCAAHYTPNTGDTTVLEYDDVVKIDFGTHING 508
C S N C H P D+ VL+ D++ ID ++NG
Sbjct: 470 VCTSVNECICHGIP---DSRVLQNGDIINIDVTVYLNG 504
>05_04_0299 -
19958776-19958858,19958883-19959012,19960131-19960175,
19960252-19960370,19960450-19960543,19961824-19961985,
19962117-19962266,19962472-19962537,19962934-19962981,
19963654-19963866,19963953-19964078,19964155-19964232,
19964600-19964671,19965522-19965953,19966863-19966925,
19967497-19967898
Length = 760
Score = 29.5 bits (63), Expect = 1.7
Identities = 13/26 (50%), Positives = 20/26 (76%)
Frame = +2
Query: 161 ERTAKNRFTSEEKRALDRLHKDIYQE 238
+RT K R+ SE+KR LDR HK++ ++
Sbjct: 60 KRTGKRRYPSEKKR-LDRRHKELLRK 84
>03_05_1014 -
29687343-29687410,29688054-29688191,29689246-29689294,
29689623-29689728,29690184-29690332,29690840-29690921,
29691308-29691360,29691644-29691729,29691855-29691909,
29692179-29692579,29693564-29693660,29694191-29694322,
29694426-29694476,29694659-29694751,29694917-29694992,
29695711-29695856,29696009-29696043,29696056-29696107,
29696290-29696401,29696617-29696813,29697456-29697560,
29697667-29697819,29698317-29698424,29698608-29698752,
29699374-29699432,29701397-29701441,29701677-29701730,
29701901-29702113,29702873-29702958,29704492-29704572,
29704670-29704729,29705599-29705644,29706212-29706286,
29706376-29706512,29708306-29708366,29708726-29708743,
29709710-29709743,29709811-29709902,29709997-29710029
Length = 1260
Score = 29.5 bits (63), Expect = 1.7
Identities = 18/51 (35%), Positives = 26/51 (50%)
Frame = -3
Query: 286 ADVFSCLPVGFSSMSDLLINIFM*SIKSSFLLTCKTIFCSSLINTLSRTMV 134
A V +CL +G M+ L N + S+ S L C T+ CS TL+ M+
Sbjct: 361 AVVTTCLALGTKRMARL--NAIVRSLPSVETLGCTTVICSDKTGTLTTNMM 409
>01_06_1193 -
35306608-35306777,35306869-35306890,35306988-35306996,
35307107-35307115,35307470-35307491,35307981-35308784,
35308861-35309088,35309250-35309335,35309449-35309530,
35309630-35309778,35309992-35310105,35310961-35311059,
35311243-35311321,35311873-35312021
Length = 673
Score = 29.5 bits (63), Expect = 1.7
Identities = 13/47 (27%), Positives = 30/47 (63%), Gaps = 1/47 (2%)
Frame = +3
Query: 120 RVKLWTMVLLRVLMRELQKIV-LQVRRKELLIDYIKIFIRRSDMLLK 257
+V+ + + LL +M+ + V L+V + +L + +KI +++DML++
Sbjct: 69 KVQFYALTLLETMMKNCGEYVQLEVAEQHVLQEMVKIIQKKNDMLVR 115
>05_03_0633 +
16416913-16417009,16417976-16418060,16418398-16418551,
16418808-16419023,16419105-16419241,16419317-16419408,
16419622-16419804,16421722-16421819,16422021-16422070,
16424605-16424756,16424944-16425069,16426315-16426523
Length = 532
Score = 29.1 bits (62), Expect = 2.2
Identities = 15/56 (26%), Positives = 28/56 (50%)
Frame = +2
Query: 194 EKRALDRLHKDIYQEIRHAAEAHRQTRKHIRNWIKPGMTMIDICEELEKTARRLIG 361
E++ LD D+ + + AA+ K + + KP ++DICE+ + R +G
Sbjct: 9 EEKELDLSSSDVVTKYKDAADIINNALKLVVSLCKPKAKIVDICEKGDSYIRDDMG 64
>12_02_0604 + 20920609-20922144
Length = 511
Score = 28.3 bits (60), Expect = 3.9
Identities = 15/40 (37%), Positives = 21/40 (52%)
Frame = +2
Query: 191 EEKRALDRLHKDIYQEIRHAAEAHRQTRKHIRNWIKPGMT 310
E++ +D L KDI Q AEAHR+ + I W+ T
Sbjct: 457 EKREKIDVLIKDIEQLNLEVAEAHRKRKGGIWAWLYAATT 496
>07_03_0551 +
19374405-19374541,19375201-19375435,19375539-19375700,
19375778-19375819,19375941-19376012,19376291-19376370,
19376962-19377059,19377691-19377738,19377983-19378083,
19378331-19378426,19378599-19378689,19379510-19379706,
19380918-19381004,19381208-19381488,19381653-19381743
Length = 605
Score = 28.3 bits (60), Expect = 3.9
Identities = 21/74 (28%), Positives = 30/74 (40%), Gaps = 2/74 (2%)
Frame = +2
Query: 293 IKPGMTMIDICEELEKTARRLIGEDGLKAGLAFPTG-C-SRNHCAAHYTPNTGDTTVLEY 466
IKP +T +I E+ FP C S N C H P D+T L+
Sbjct: 123 IKPSVTTNEIDREVHNMIIEAGAYPSQLGYGGFPKSICTSLNECVCHGVP---DSTQLQT 179
Query: 467 DDVVKIDFGTHING 508
D++ +D +NG
Sbjct: 180 GDIMNVDVNVFLNG 193
>03_01_0423 +
3240224-3240394,3241464-3241628,3242322-3242339,
3242494-3242836,3244138-3248540,3248928-3249107,
3249108-3250892,3251055-3252173
Length = 2727
Score = 28.3 bits (60), Expect = 3.9
Identities = 18/67 (26%), Positives = 31/67 (46%), Gaps = 1/67 (1%)
Frame = +2
Query: 158 DERTAKNRFTSEEK-RALDRLHKDIYQEIRHAAEAHRQTRKHIRNWIKPGMTMIDICEEL 334
DER+ N E RAL+ LH +E++ A + K + + + + D+ + L
Sbjct: 790 DERS--NHMQKEAALRALENLHSQSQEEVKQMARDVEHSNKKLSDLENNNLKLHDLSQGL 847
Query: 335 EKTARRL 355
+KT L
Sbjct: 848 KKTVAEL 854
>03_01_0040 -
353861-353981,354618-354730,355034-355129,355406-355522,
356071-356169,356416-356547,356651-356827,356949-357123,
357225-357313,357981-358079
Length = 405
Score = 28.3 bits (60), Expect = 3.9
Identities = 10/22 (45%), Positives = 16/22 (72%)
Frame = +2
Query: 86 VAELFPDGNFPEGQIMDHGPAE 151
+A+ PDGNF +G+++ GP E
Sbjct: 88 IAKCGPDGNFSKGEMVPFGPIE 109
>04_04_1111 -
30979334-30979479,30979769-30979866,30980364-30980443,
30980685-30980756,30980860-30980901,30981009-30981170,
30981276-30981427,30981453-30981538,30981654-30981726,
30982706-30982889
Length = 364
Score = 27.9 bits (59), Expect = 5.1
Identities = 24/96 (25%), Positives = 43/96 (44%), Gaps = 6/96 (6%)
Frame = +2
Query: 239 IRHAAEAHRQTRKHIRNWIKPGMTMIDICEELEKTARRLIGEDGLKAGL----AFPTG-C 403
++ A E + ++ +KP +T +E++K ++I + G FP C
Sbjct: 146 MKAACELAARVLEYAGTLVKPSVTT----DEIDKAVHKMIIDAGAYPSPLGYGGFPKSVC 201
Query: 404 -SRNHCAAHYTPNTGDTTVLEYDDVVKIDFGTHING 508
S N C H P D+ L+ D++ ID ++NG
Sbjct: 202 TSVNECICHGIP---DSRELQDGDIINIDVTVYLNG 234
>10_08_0683 -
19860777-19861070,19861677-19861874,19862498-19862659,
19862763-19862911,19863089-19863236,19863317-19863385,
19863471-19863719,19863937-19864131,19864444-19864560,
19864978-19866537
Length = 1046
Score = 27.1 bits (57), Expect = 8.9
Identities = 11/27 (40%), Positives = 17/27 (62%)
Frame = -1
Query: 162 SSIPSAGPWSII*PSGKFPSGNSSATG 82
+++P+A S++ PS FP G SS G
Sbjct: 167 AAVPAASSPSVLPPSASFPGGGSSHGG 193
>06_03_1068 -
27341103-27341444,27341689-27341929,27342030-27342343,
27342672-27343805
Length = 676
Score = 27.1 bits (57), Expect = 8.9
Identities = 17/48 (35%), Positives = 22/48 (45%)
Frame = +2
Query: 344 ARRLIGEDGLKAGLAFPTGCSRNHCAAHYTPNTGDTTVLEYDDVVKID 487
+RR G G G FP G ++ PNTG T +DDV +D
Sbjct: 177 SRRAQGGLGGPNGPGFPLGFGQSRAKFQMEPNTGVT----FDDVAGVD 220
>05_03_0582 -
15738503-15739301,15739385-15739642,15740585-15740670,
15740879-15740960,15741044-15741213,15742081-15742194,
15742984-15743082,15743171-15743249,15744604-15744710
Length = 597
Score = 27.1 bits (57), Expect = 8.9
Identities = 14/47 (29%), Positives = 28/47 (59%), Gaps = 1/47 (2%)
Frame = +3
Query: 120 RVKLWTMVLLRVLMREL-QKIVLQVRRKELLIDYIKIFIRRSDMLLK 257
+V+ + + LL LM+ + QV +++L + IKI +++DM L+
Sbjct: 55 KVQFFALTLLETLMKNCGDHVHSQVVERDILQEMIKIVKKKTDMQLR 101
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,050,203
Number of Sequences: 37544
Number of extensions: 298121
Number of successful extensions: 891
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 866
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 889
length of database: 14,793,348
effective HSP length: 77
effective length of database: 11,902,460
effective search space used: 1118831240
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -