Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= epV30554
         (516 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF625896-1|ABR45903.1|  683|Apis mellifera hexamerin protein.          21   5.7  
AY601637-1|AAT11850.1|  683|Apis mellifera hexamerin 70b protein.      21   5.7  
AF134821-1|AAD40236.1|  226|Apis mellifera hexamerin protein.          21   5.7  
DQ325089-1|ABD14103.1|  185|Apis mellifera complementary sex det...    21   10.0 
DQ325088-1|ABD14102.1|  185|Apis mellifera complementary sex det...    21   10.0 
DQ325087-1|ABD14101.1|  179|Apis mellifera complementary sex det...    21   10.0 
DQ325086-1|ABD14100.1|  179|Apis mellifera complementary sex det...    21   10.0 
DQ325085-1|ABD14099.1|  179|Apis mellifera complementary sex det...    21   10.0 
DQ325084-1|ABD14098.1|  179|Apis mellifera complementary sex det...    21   10.0 
AY569717-1|AAS86670.1|  397|Apis mellifera complementary sex det...    21   10.0 
AY569712-1|AAS86665.1|  408|Apis mellifera complementary sex det...    21   10.0 

>EF625896-1|ABR45903.1|  683|Apis mellifera hexamerin protein.
          Length = 683

 Score = 21.4 bits (43), Expect = 5.7
 Identities = 7/14 (50%), Positives = 11/14 (78%)
 Frame = +3

Query: 327 NFVQFNEFYINIDS 368
           NF+Q +EF +N+ S
Sbjct: 537 NFMQMDEFVVNLKS 550


>AY601637-1|AAT11850.1|  683|Apis mellifera hexamerin 70b protein.
          Length = 683

 Score = 21.4 bits (43), Expect = 5.7
 Identities = 7/14 (50%), Positives = 11/14 (78%)
 Frame = +3

Query: 327 NFVQFNEFYINIDS 368
           NF+Q +EF +N+ S
Sbjct: 537 NFMQMDEFVVNLKS 550


>AF134821-1|AAD40236.1|  226|Apis mellifera hexamerin protein.
          Length = 226

 Score = 21.4 bits (43), Expect = 5.7
 Identities = 7/14 (50%), Positives = 11/14 (78%)
 Frame = +3

Query: 327 NFVQFNEFYINIDS 368
           NF+Q +EF +N+ S
Sbjct: 163 NFMQMDEFVVNLKS 176


>DQ325089-1|ABD14103.1|  185|Apis mellifera complementary sex
           determiner protein.
          Length = 185

 Score = 20.6 bits (41), Expect = 10.0
 Identities = 8/21 (38%), Positives = 12/21 (57%)
 Frame = -1

Query: 267 SISHSKIKTELYNRHYNYKNY 205
           S+S++ I    Y  +YN  NY
Sbjct: 83  SLSNNTIHNNNYKYNYNNNNY 103


>DQ325088-1|ABD14102.1|  185|Apis mellifera complementary sex
           determiner protein.
          Length = 185

 Score = 20.6 bits (41), Expect = 10.0
 Identities = 8/21 (38%), Positives = 12/21 (57%)
 Frame = -1

Query: 267 SISHSKIKTELYNRHYNYKNY 205
           S+S++ I    Y  +YN  NY
Sbjct: 83  SLSNNTIHNNNYKYNYNNNNY 103


>DQ325087-1|ABD14101.1|  179|Apis mellifera complementary sex
           determiner protein.
          Length = 179

 Score = 20.6 bits (41), Expect = 10.0
 Identities = 8/21 (38%), Positives = 12/21 (57%)
 Frame = -1

Query: 267 SISHSKIKTELYNRHYNYKNY 205
           S+S++ I    Y  +YN  NY
Sbjct: 84  SLSNNTIHNNNYKYNYNNNNY 104


>DQ325086-1|ABD14100.1|  179|Apis mellifera complementary sex
           determiner protein.
          Length = 179

 Score = 20.6 bits (41), Expect = 10.0
 Identities = 8/21 (38%), Positives = 12/21 (57%)
 Frame = -1

Query: 267 SISHSKIKTELYNRHYNYKNY 205
           S+S++ I    Y  +YN  NY
Sbjct: 84  SLSNNTIHNNNYKYNYNNNNY 104


>DQ325085-1|ABD14099.1|  179|Apis mellifera complementary sex
           determiner protein.
          Length = 179

 Score = 20.6 bits (41), Expect = 10.0
 Identities = 8/21 (38%), Positives = 12/21 (57%)
 Frame = -1

Query: 267 SISHSKIKTELYNRHYNYKNY 205
           S+S++ I    Y  +YN  NY
Sbjct: 84  SLSNNTIHNNNYKYNYNNNNY 104


>DQ325084-1|ABD14098.1|  179|Apis mellifera complementary sex
           determiner protein.
          Length = 179

 Score = 20.6 bits (41), Expect = 10.0
 Identities = 8/21 (38%), Positives = 12/21 (57%)
 Frame = -1

Query: 267 SISHSKIKTELYNRHYNYKNY 205
           S+S++ I    Y  +YN  NY
Sbjct: 84  SLSNNTIHNNNYKYNYNNNNY 104


>AY569717-1|AAS86670.1|  397|Apis mellifera complementary sex
           determiner protein.
          Length = 397

 Score = 20.6 bits (41), Expect = 10.0
 Identities = 8/17 (47%), Positives = 11/17 (64%)
 Frame = -1

Query: 255 SKIKTELYNRHYNYKNY 205
           SK    + + +YNYKNY
Sbjct: 298 SKETKIISSNNYNYKNY 314


>AY569712-1|AAS86665.1|  408|Apis mellifera complementary sex
           determiner protein.
          Length = 408

 Score = 20.6 bits (41), Expect = 10.0
 Identities = 8/17 (47%), Positives = 11/17 (64%)
 Frame = -1

Query: 255 SKIKTELYNRHYNYKNY 205
           SK    + + +YNYKNY
Sbjct: 309 SKETKIISSNNYNYKNY 325


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 121,926
Number of Sequences: 438
Number of extensions: 2793
Number of successful extensions: 11
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11
length of database: 146,343
effective HSP length: 54
effective length of database: 122,691
effective search space used: 14354847
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)