Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= epV30551
         (516 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

09_06_0210 - 21597470-21598093                                         29   2.2  
03_01_0403 - 3133568-3134440,3135131-3135494,3136341-3136408,313...    28   5.1  
01_06_0638 - 30768546-30768779,30768908-30769017,30769301-307694...    28   5.1  
01_06_0357 - 28668894-28669238,28669510-28669537,28669578-286696...    28   5.1  
11_06_0055 + 19674848-19674905,19675027-19675229                       27   6.8  
05_03_0598 - 16020856-16020959,16021079-16021457,16023146-160232...    27   6.8  
04_04_1125 + 31085106-31085714                                         27   6.8  

>09_06_0210 - 21597470-21598093
          Length = 207

 Score = 29.1 bits (62), Expect = 2.2
 Identities = 12/30 (40%), Positives = 14/30 (46%)
 Frame = -3

Query: 502 RRRWXGPTLXGXRMWGVXPLXWQXVCGXDW 413
           RR+   P L   R WG+ P  W    G DW
Sbjct: 88  RRQCLPPDLVDDRRWGLLPDGWLRCGGPDW 117


>03_01_0403 -
           3133568-3134440,3135131-3135494,3136341-3136408,
           3137184-3137857,3138093-3138105
          Length = 663

 Score = 27.9 bits (59), Expect = 5.1
 Identities = 12/30 (40%), Positives = 14/30 (46%)
 Frame = +2

Query: 56  WPPKLESTLLSSTTRVYSTVSPFVYKXGRY 145
           WPP L  +    T   Y TV+P     GRY
Sbjct: 581 WPPALSFSPYRDTASYYVTVAPAKLSRGRY 610


>01_06_0638 -
           30768546-30768779,30768908-30769017,30769301-30769490,
           30769842-30769914,30770007-30770063,30770147-30770211,
           30770278-30770488,30770568-30770650,30771123-30771158,
           30771611-30771713,30771813-30771899,30772210-30772403
          Length = 480

 Score = 27.9 bits (59), Expect = 5.1
 Identities = 9/24 (37%), Positives = 16/24 (66%)
 Frame = +3

Query: 231 DPWRPWCRRWLLHWIPVLLEVPEE 302
           D  RPW   W++H + +L E+P++
Sbjct: 92  DANRPWLCYWIIHALALLDEIPDD 115


>01_06_0357 -
           28668894-28669238,28669510-28669537,28669578-28669635,
           28669836-28669916,28670395-28670526,28670609-28670926,
           28672495-28673317
          Length = 594

 Score = 27.9 bits (59), Expect = 5.1
 Identities = 13/45 (28%), Positives = 23/45 (51%), Gaps = 5/45 (11%)
 Frame = -3

Query: 169 VITAWISYIAAXLI-----DEWRNSRVNSGCTGKECTFQFRRPAP 50
           +I  W+ Y A  L+     D++R+  ++  C G +  F F+ P P
Sbjct: 544 IIIKWVGYEATGLVLHKEVDQFRDWTLSPWCPGVQRVFSFQVPGP 588


>11_06_0055 + 19674848-19674905,19675027-19675229
          Length = 86

 Score = 27.5 bits (58), Expect = 6.8
 Identities = 22/64 (34%), Positives = 30/64 (46%), Gaps = 3/64 (4%)
 Frame = +1

Query: 4   TTEMRVFLAICLSLTVA-LAAETGKYTPFQYNPSLL--YCFSIRL*ARPLCS*SRPL*PQ 174
           T+ M +F  + L L+   LA   GK +       L   YC  I+    PLC+ + PL P 
Sbjct: 3   TSHMMIFSLLLLVLSSGDLAMADGKLSDADCKMILFPAYCDDIKT-CIPLCTNNSPLKPA 61

Query: 175 PRQL 186
           P QL
Sbjct: 62  PSQL 65


>05_03_0598 -
           16020856-16020959,16021079-16021457,16023146-16023245,
           16023452-16023640,16023992-16024089
          Length = 289

 Score = 27.5 bits (58), Expect = 6.8
 Identities = 15/52 (28%), Positives = 21/52 (40%)
 Frame = +3

Query: 171 PAATTSGPLHSPTTSGAYNGDPWRPWCRRWLLHWIPVLLEVPEEPYVRDQGG 326
           P     G      T G + G P+RPW  R  +  + +L    EE +  D  G
Sbjct: 71  PGRRLPGLCQGKRTFGGWLGQPYRPWSLRKTMKTVCLLKAGGEEGFGADTMG 122


>04_04_1125 + 31085106-31085714
          Length = 202

 Score = 27.5 bits (58), Expect = 6.8
 Identities = 12/30 (40%), Positives = 12/30 (40%)
 Frame = +3

Query: 381 CPFVKPXHFPCQSXPHTXCQXRGXTPHIRW 470
           CP  KP   PCQ  P T       TP   W
Sbjct: 34  CPTTKPPPPPCQPPPPTPTPATPTTPPTPW 63


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,062,233
Number of Sequences: 37544
Number of extensions: 271825
Number of successful extensions: 749
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 734
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 749
length of database: 14,793,348
effective HSP length: 77
effective length of database: 11,902,460
effective search space used: 1118831240
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)