Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= epV30550
(388 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z78540-6|CAD30431.1| 887|Caenorhabditis elegans Hypothetical pr... 31 0.37
Z78540-5|CAB01738.2| 793|Caenorhabditis elegans Hypothetical pr... 31 0.37
Z72501-3|CAD30430.1| 887|Caenorhabditis elegans Hypothetical pr... 31 0.37
AJ133838-1|CAB44432.1| 793|Caenorhabditis elegans DYC-1 protein... 31 0.37
AF098501-3|AAM69106.1| 275|Caenorhabditis elegans Hypothetical ... 29 1.1
AF098501-2|AAM69105.1| 298|Caenorhabditis elegans Hypothetical ... 29 1.1
AF098501-1|AAC67404.2| 548|Caenorhabditis elegans Hypothetical ... 29 1.1
U88170-4|AAB42245.2| 425|Caenorhabditis elegans Hypothetical pr... 29 1.5
Z81560-7|CAB76737.2| 188|Caenorhabditis elegans Hypothetical pr... 28 2.0
U41104-5|AAK18976.3| 1564|Caenorhabditis elegans Twik family of ... 27 4.6
U29488-7|AAA68771.1| 221|Caenorhabditis elegans Hypothetical pr... 27 4.6
AF016448-12|AAB65959.1| 316|Caenorhabditis elegans Hypothetical... 27 6.1
AC006644-6|AAZ91358.1| 958|Caenorhabditis elegans Hypothetical ... 27 6.1
Z99710-6|CAB16869.1| 362|Caenorhabditis elegans Hypothetical pr... 26 8.1
Z75552-8|CAD54158.1| 939|Caenorhabditis elegans Hypothetical pr... 26 8.1
Z75552-7|CAA99943.3| 944|Caenorhabditis elegans Hypothetical pr... 26 8.1
Z75539-5|CAD54134.1| 939|Caenorhabditis elegans Hypothetical pr... 26 8.1
Z75539-4|CAA99846.3| 944|Caenorhabditis elegans Hypothetical pr... 26 8.1
U64857-10|AAC25860.1| 265|Caenorhabditis elegans Hypothetical p... 26 8.1
U41546-6|AAC48223.1| 798|Caenorhabditis elegans Hypothetical pr... 26 8.1
AL161712-19|CAC70143.2| 261|Caenorhabditis elegans Hypothetical... 26 8.1
>Z78540-6|CAD30431.1| 887|Caenorhabditis elegans Hypothetical
protein C33G3.1b protein.
Length = 887
Score = 30.7 bits (66), Expect = 0.37
Identities = 20/78 (25%), Positives = 37/78 (47%), Gaps = 4/78 (5%)
Frame = -1
Query: 238 PPMAVPI---PPNEVAMPSRPFSILSSSIPWSAKLEISFTCPALS-LPKLSSAESPKLPN 71
P A+P P + + + + F+ L S +P + L P S +P++ + P +P
Sbjct: 287 PQTALPYQQKPQSLLNIQQQQFNTLPSQMPSTQTLPSLSENPGQSHIPRMMTMP-PNMPY 345
Query: 70 PESWCPNPESWCPNPESW 17
P + P+P +W P S+
Sbjct: 346 PTATLPHPRTWAPQIPSY 363
>Z78540-5|CAB01738.2| 793|Caenorhabditis elegans Hypothetical
protein C33G3.1a protein.
Length = 793
Score = 30.7 bits (66), Expect = 0.37
Identities = 20/78 (25%), Positives = 37/78 (47%), Gaps = 4/78 (5%)
Frame = -1
Query: 238 PPMAVPI---PPNEVAMPSRPFSILSSSIPWSAKLEISFTCPALS-LPKLSSAESPKLPN 71
P A+P P + + + + F+ L S +P + L P S +P++ + P +P
Sbjct: 193 PQTALPYQQKPQSLLNIQQQQFNTLPSQMPSTQTLPSLSENPGQSHIPRMMTMP-PNMPY 251
Query: 70 PESWCPNPESWCPNPESW 17
P + P+P +W P S+
Sbjct: 252 PTATLPHPRTWAPQIPSY 269
>Z72501-3|CAD30430.1| 887|Caenorhabditis elegans Hypothetical
protein C33G3.1b protein.
Length = 887
Score = 30.7 bits (66), Expect = 0.37
Identities = 20/78 (25%), Positives = 37/78 (47%), Gaps = 4/78 (5%)
Frame = -1
Query: 238 PPMAVPI---PPNEVAMPSRPFSILSSSIPWSAKLEISFTCPALS-LPKLSSAESPKLPN 71
P A+P P + + + + F+ L S +P + L P S +P++ + P +P
Sbjct: 287 PQTALPYQQKPQSLLNIQQQQFNTLPSQMPSTQTLPSLSENPGQSHIPRMMTMP-PNMPY 345
Query: 70 PESWCPNPESWCPNPESW 17
P + P+P +W P S+
Sbjct: 346 PTATLPHPRTWAPQIPSY 363
>AJ133838-1|CAB44432.1| 793|Caenorhabditis elegans DYC-1 protein
protein.
Length = 793
Score = 30.7 bits (66), Expect = 0.37
Identities = 20/78 (25%), Positives = 37/78 (47%), Gaps = 4/78 (5%)
Frame = -1
Query: 238 PPMAVPI---PPNEVAMPSRPFSILSSSIPWSAKLEISFTCPALS-LPKLSSAESPKLPN 71
P A+P P + + + + F+ L S +P + L P S +P++ + P +P
Sbjct: 193 PQTALPYQQKPQSLLNIQQQQFNTLPSQMPSTQTLPSLSENPGQSHIPRMMTMP-PNMPY 251
Query: 70 PESWCPNPESWCPNPESW 17
P + P+P +W P S+
Sbjct: 252 PTATLPHPRTWAPQIPSY 269
>AF098501-3|AAM69106.1| 275|Caenorhabditis elegans Hypothetical
protein H28G03.2c protein.
Length = 275
Score = 29.1 bits (62), Expect = 1.1
Identities = 18/66 (27%), Positives = 30/66 (45%)
Frame = -1
Query: 265 PFAIFEVRAPPMAVPIPPNEVAMPSRPFSILSSSIPWSAKLEISFTCPALSLPKLSSAES 86
PF + PP + +PP + + + P+++ P S F+ P P SSA +
Sbjct: 91 PFMPPPIGMPPPPLGMPPPHIGLGAAPYAV---PPPMSLLGPPPFSVPPSVPPPTSSAAA 147
Query: 85 PKLPNP 68
P +P P
Sbjct: 148 PIVPPP 153
>AF098501-2|AAM69105.1| 298|Caenorhabditis elegans Hypothetical
protein H28G03.2b protein.
Length = 298
Score = 29.1 bits (62), Expect = 1.1
Identities = 18/66 (27%), Positives = 30/66 (45%)
Frame = -1
Query: 265 PFAIFEVRAPPMAVPIPPNEVAMPSRPFSILSSSIPWSAKLEISFTCPALSLPKLSSAES 86
PF + PP + +PP + + + P+++ P S F+ P P SSA +
Sbjct: 114 PFMPPPIGMPPPPLGMPPPHIGLGAAPYAV---PPPMSLLGPPPFSVPPSVPPPTSSAAA 170
Query: 85 PKLPNP 68
P +P P
Sbjct: 171 PIVPPP 176
>AF098501-1|AAC67404.2| 548|Caenorhabditis elegans Hypothetical
protein H28G03.2a protein.
Length = 548
Score = 29.1 bits (62), Expect = 1.1
Identities = 18/66 (27%), Positives = 30/66 (45%)
Frame = -1
Query: 265 PFAIFEVRAPPMAVPIPPNEVAMPSRPFSILSSSIPWSAKLEISFTCPALSLPKLSSAES 86
PF + PP + +PP + + + P+++ P S F+ P P SSA +
Sbjct: 364 PFMPPPIGMPPPPLGMPPPHIGLGAAPYAV---PPPMSLLGPPPFSVPPSVPPPTSSAAA 420
Query: 85 PKLPNP 68
P +P P
Sbjct: 421 PIVPPP 426
>U88170-4|AAB42245.2| 425|Caenorhabditis elegans Hypothetical
protein C10G11.6 protein.
Length = 425
Score = 28.7 bits (61), Expect = 1.5
Identities = 22/78 (28%), Positives = 34/78 (43%), Gaps = 2/78 (2%)
Frame = -1
Query: 265 PFAIFEVRAPP--MAVPIPPNEVAMPSRPFSILSSSIPWSAKLEISFTCPALSLPKLSSA 92
P +VR PP +++P+PP + PS F I + SI +AK S LS ++
Sbjct: 171 PIVSPDVRRPPPSLSIPLPPMHIPPPSVYF-ISTPSIYSTAKSSTSTVTSKLSKAIITPT 229
Query: 91 ESPKLPNPESWCPNPESW 38
L +P P +
Sbjct: 230 PPQPLSSPHLLPPRTSDY 247
>Z81560-7|CAB76737.2| 188|Caenorhabditis elegans Hypothetical
protein K02E2.8a protein.
Length = 188
Score = 28.3 bits (60), Expect = 2.0
Identities = 12/64 (18%), Positives = 24/64 (37%)
Frame = -1
Query: 247 VRAPPMAVPIPPNEVAMPSRPFSILSSSIPWSAKLEISFTCPALSLPKLSSAESPKLPNP 68
+ AP VPI + + ++ P + + C + P + + +P+P
Sbjct: 34 ISAPTTTVPITTTNPVSTTTTTTTTTTEAPTTTTTVVPIPCNICTSPYNAGCQGMGVPSP 93
Query: 67 ESWC 56
WC
Sbjct: 94 TDWC 97
>U41104-5|AAK18976.3| 1564|Caenorhabditis elegans Twik family of
potassium channelsprotein 2 protein.
Length = 1564
Score = 27.1 bits (57), Expect = 4.6
Identities = 12/27 (44%), Positives = 16/27 (59%), Gaps = 2/27 (7%)
Frame = -1
Query: 238 PPMAVPIPP--NEVAMPSRPFSILSSS 164
PP+ +P PP N V+ P RP S + S
Sbjct: 493 PPIEIPSPPPSNSVSSPRRPLSARTGS 519
>U29488-7|AAA68771.1| 221|Caenorhabditis elegans Hypothetical
protein C56C10.3 protein.
Length = 221
Score = 27.1 bits (57), Expect = 4.6
Identities = 11/26 (42%), Positives = 18/26 (69%)
Frame = -1
Query: 256 IFEVRAPPMAVPIPPNEVAMPSRPFS 179
+ + RAPP+ +P PN +A+P+ P S
Sbjct: 177 LLDARAPPVTLPDTPN-IALPAVPAS 201
>AF016448-12|AAB65959.1| 316|Caenorhabditis elegans Hypothetical
protein F41E6.11 protein.
Length = 316
Score = 26.6 bits (56), Expect = 6.1
Identities = 16/71 (22%), Positives = 26/71 (36%)
Frame = -1
Query: 238 PPMAVPIPPNEVAMPSRPFSILSSSIPWSAKLEISFTCPALSLPKLSSAESPKLPNPESW 59
PP P+PP + P+ ++ + P +E P P + P P +
Sbjct: 42 PPQYAPLPPPPMPAPAPAYNPYPCANPPCIVVEPMPVAPPAPAPAYNPYPCATPPCPLPY 101
Query: 58 CPNPESWCPNP 26
P P + P P
Sbjct: 102 IPEPVAPVPAP 112
>AC006644-6|AAZ91358.1| 958|Caenorhabditis elegans Hypothetical
protein F55A3.1 protein.
Length = 958
Score = 26.6 bits (56), Expect = 6.1
Identities = 11/26 (42%), Positives = 14/26 (53%)
Frame = -1
Query: 97 SAESPKLPNPESWCPNPESWCPNPES 20
S ++ P+ S PNPE CP P S
Sbjct: 15 SVDASNRPSTSSENPNPEEPCPQPPS 40
>Z99710-6|CAB16869.1| 362|Caenorhabditis elegans Hypothetical
protein F08A8.6 protein.
Length = 362
Score = 26.2 bits (55), Expect = 8.1
Identities = 14/48 (29%), Positives = 21/48 (43%)
Frame = -2
Query: 159 HGLLNWKYPLRVRHCLCQNCRARSHQSYRIRSRGVQIRSHGVQIRNHG 16
H +L WK+ L V L ++YR R Q+ H R++G
Sbjct: 58 HPVLTWKFCLLVHKLLRDGHPVVPKEAYRNEKRFTQLALHWKDKRDYG 105
>Z75552-8|CAD54158.1| 939|Caenorhabditis elegans Hypothetical
protein F28C1.3b protein.
Length = 939
Score = 26.2 bits (55), Expect = 8.1
Identities = 12/22 (54%), Positives = 15/22 (68%)
Frame = -1
Query: 223 PIPPNEVAMPSRPFSILSSSIP 158
PIP N +A+P RP S L+ IP
Sbjct: 726 PIPENSIALPVRP-STLAIGIP 746
>Z75552-7|CAA99943.3| 944|Caenorhabditis elegans Hypothetical
protein F28C1.3a protein.
Length = 944
Score = 26.2 bits (55), Expect = 8.1
Identities = 12/22 (54%), Positives = 15/22 (68%)
Frame = -1
Query: 223 PIPPNEVAMPSRPFSILSSSIP 158
PIP N +A+P RP S L+ IP
Sbjct: 731 PIPENSIALPVRP-STLAIGIP 751
>Z75539-5|CAD54134.1| 939|Caenorhabditis elegans Hypothetical
protein F28C1.3b protein.
Length = 939
Score = 26.2 bits (55), Expect = 8.1
Identities = 12/22 (54%), Positives = 15/22 (68%)
Frame = -1
Query: 223 PIPPNEVAMPSRPFSILSSSIP 158
PIP N +A+P RP S L+ IP
Sbjct: 726 PIPENSIALPVRP-STLAIGIP 746
>Z75539-4|CAA99846.3| 944|Caenorhabditis elegans Hypothetical
protein F28C1.3a protein.
Length = 944
Score = 26.2 bits (55), Expect = 8.1
Identities = 12/22 (54%), Positives = 15/22 (68%)
Frame = -1
Query: 223 PIPPNEVAMPSRPFSILSSSIP 158
PIP N +A+P RP S L+ IP
Sbjct: 731 PIPENSIALPVRP-STLAIGIP 751
>U64857-10|AAC25860.1| 265|Caenorhabditis elegans Hypothetical
protein C37C3.3 protein.
Length = 265
Score = 26.2 bits (55), Expect = 8.1
Identities = 12/25 (48%), Positives = 18/25 (72%), Gaps = 1/25 (4%)
Frame = -1
Query: 256 IFEVRAPPMAVPIPPNEVAMP-SRP 185
+ + RAPP+ +P PN +A+P SRP
Sbjct: 225 LLDARAPPVTLPDTPN-IALPASRP 248
>U41546-6|AAC48223.1| 798|Caenorhabditis elegans Hypothetical
protein T25B6.2 protein.
Length = 798
Score = 26.2 bits (55), Expect = 8.1
Identities = 10/26 (38%), Positives = 13/26 (50%)
Frame = -1
Query: 91 ESPKLPNPESWCPNPESWCPNPESWC 14
E +LP E++ PN W SWC
Sbjct: 713 EEDRLPGLENYTPNQIFWITYGYSWC 738
>AL161712-19|CAC70143.2| 261|Caenorhabditis elegans Hypothetical
protein Y66D12A.24 protein.
Length = 261
Score = 26.2 bits (55), Expect = 8.1
Identities = 10/19 (52%), Positives = 12/19 (63%)
Frame = -1
Query: 241 APPMAVPIPPNEVAMPSRP 185
APP A P PP E +P +P
Sbjct: 56 APPSAPPPPPPEYCVPDQP 74
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 7,535,799
Number of Sequences: 27780
Number of extensions: 161555
Number of successful extensions: 580
Number of sequences better than 10.0: 21
Number of HSP's better than 10.0 without gapping: 529
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 571
length of database: 12,740,198
effective HSP length: 74
effective length of database: 10,684,478
effective search space used: 576961812
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -