Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= epV30550
(388 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At1g79480.1 68414.m09263 hypothetical protein low similarity to ... 34 0.038
At5g58250.1 68418.m07293 expressed protein 33 0.088
At5g53870.1 68418.m06701 plastocyanin-like domain-containing pro... 33 0.088
At3g01560.1 68416.m00086 proline-rich family protein contains pr... 32 0.12
At4g24930.1 68417.m03570 thylakoid lumenal 17.9 kDa protein, chl... 32 0.15
At2g14890.2 68415.m01692 arabinogalactan-protein (AGP9) identica... 31 0.36
At2g14890.1 68415.m01693 arabinogalactan-protein (AGP9) identica... 31 0.36
At1g49490.1 68414.m05547 leucine-rich repeat family protein / ex... 30 0.62
At5g61090.1 68418.m07665 proline-rich family protein contains pr... 29 0.82
At3g60280.1 68416.m06738 uclacyanin 3 (UCC3) identical to uclacy... 29 0.82
At2g27810.2 68415.m03372 xanthine/uracil permease family protein... 29 0.82
At2g27810.1 68415.m03371 xanthine/uracil permease family protein... 29 0.82
At5g28440.1 68418.m03454 expressed protein 29 1.1
At4g18670.1 68417.m02762 leucine-rich repeat family protein / ex... 29 1.1
At3g19020.1 68416.m02415 leucine-rich repeat family protein / ex... 29 1.4
At2g04780.2 68415.m00489 fasciclin-like arabinogalactan-protein ... 29 1.4
At2g04780.1 68415.m00488 fasciclin-like arabinogalactan-protein ... 29 1.4
At1g77130.1 68414.m08985 glycogenin glucosyltransferase (glycoge... 29 1.4
At4g13340.1 68417.m02084 leucine-rich repeat family protein / ex... 28 1.9
At1g15825.1 68414.m01899 hydroxyproline-rich glycoprotein family... 28 1.9
At1g68725.1 68414.m07853 arabinogalactan-protein, putative (AGP1... 28 2.5
At1g44835.1 68414.m05136 YbaK/prolyl-tRNA synthetase family prot... 28 2.5
At5g65390.1 68418.m08224 arabinogalactan-protein (AGP7) 27 3.3
At1g49030.1 68414.m05497 expressed protein similar to PGPS/D12 [... 27 3.3
At5g14540.1 68418.m01704 proline-rich family protein contains pr... 27 4.4
At5g13560.1 68418.m01566 expressed protein weak similarity to SP... 27 4.4
At4g12500.1 68417.m01975 protease inhibitor/seed storage/lipid t... 27 4.4
At2g35630.1 68415.m04369 microtubule organization 1 protein (MOR... 27 4.4
At2g28440.1 68415.m03455 proline-rich family protein contains pr... 27 4.4
At5g38560.1 68418.m04662 protein kinase family protein contains ... 27 5.8
At5g03360.1 68418.m00289 DC1 domain-containing protein contains ... 27 5.8
At4g15160.1 68417.m02327 protease inhibitor/seed storage/lipid t... 27 5.8
At2g18510.1 68415.m02157 pre-mRNA splicing factor, putative simi... 27 5.8
At2g07714.1 68415.m00964 transcription factor-related similar to... 27 5.8
At4g19020.1 68417.m02803 chromomethylase 2 (CMT2) nearly identic... 26 7.6
At3g60270.1 68416.m06737 uclacyanin, putative similar to uclacya... 26 7.6
At3g24550.1 68416.m03083 protein kinase family protein contains ... 26 7.6
At2g06200.1 68415.m00682 expressed protein 26 7.6
>At1g79480.1 68414.m09263 hypothetical protein low similarity to
beta-1,3-glucanase-like protein GI:9758115 from
[Arabidopsis thaliana]
Length = 356
Score = 33.9 bits (74), Expect = 0.038
Identities = 24/79 (30%), Positives = 34/79 (43%), Gaps = 1/79 (1%)
Frame = -1
Query: 238 PPMAVPIPPNEVAMPSRPFSILSSSIPWSAKLEISFTCPALSLPKLSSAESPKLPNPESW 59
PP+ VP PP + P+ P S + + + S P +++P + S P S
Sbjct: 124 PPVTVPNPPESSSNPNPPDSSSNPNSNPNPPESSSNPNPPVTVPNPPESSSNPNPPESSS 183
Query: 58 CPNPESWCP-NPESWCPXP 5
PNP P PES P P
Sbjct: 184 NPNPPITIPYPPESSSPNP 202
Score = 29.9 bits (64), Expect = 0.62
Identities = 26/82 (31%), Positives = 33/82 (40%), Gaps = 1/82 (1%)
Frame = -1
Query: 268 RPFAIFEVRAPPMAVPIPPNEVAMPSRPFSILSSSIPWSAKLEISFTCPALSLPKLSSAE 89
+P+ + P V +PP V + PF I + P P+ S P LS
Sbjct: 33 QPYGVSTTLTLPPYVSLPPLSVPGNAPPFCINPPNTP-----------PSSSYPGLSPPP 81
Query: 88 SP-KLPNPESWCPNPESWCPNP 26
P LPNP NP S PNP
Sbjct: 82 GPITLPNPPDSSSNPNS-NPNP 102
Score = 27.9 bits (59), Expect = 2.5
Identities = 22/82 (26%), Positives = 30/82 (36%), Gaps = 7/82 (8%)
Frame = -1
Query: 238 PPMAVPIPPNEVA------MPSRPFS-ILSSSIPWSAKLEISFTCPALSLPKLSSAESPK 80
PP+ +P PP + +PS P S + E + P S+P SS P
Sbjct: 187 PPITIPYPPESSSPNPPEIVPSPPESGYTPGPVLGPPYSEPGPSTPTGSIPSPSSGFLPP 246
Query: 79 LPNPESWCPNPESWCPNPESWC 14
+ P P S P WC
Sbjct: 247 IVYPPPMAPPSPSVTPTSAYWC 268
Score = 26.6 bits (56), Expect = 5.8
Identities = 21/78 (26%), Positives = 28/78 (35%)
Frame = -1
Query: 238 PPMAVPIPPNEVAMPSRPFSILSSSIPWSAKLEISFTCPALSLPKLSSAESPKLPNPESW 59
PP+ VP PP + P+ P S + + P + + P S ES P P
Sbjct: 162 PPVTVPNPPESSSNPNPPESSSNPNPPITIPYPPESSSPNPPEIVPSPPESGYTPGPVLG 221
Query: 58 CPNPESWCPNPESWCPXP 5
P E P P P
Sbjct: 222 PPYSEPGPSTPTGSIPSP 239
>At5g58250.1 68418.m07293 expressed protein
Length = 211
Score = 32.7 bits (71), Expect = 0.088
Identities = 18/51 (35%), Positives = 29/51 (56%)
Frame = -1
Query: 232 MAVPIPPNEVAMPSRPFSILSSSIPWSAKLEISFTCPALSLPKLSSAESPK 80
+ V +PP A ++PF ++SSS P K ++ + P+LSLP + S K
Sbjct: 8 LTVAVPPTAAACRTKPF-LISSSFPKQTK-KLHLSSPSLSLPSSHFSSSFK 56
>At5g53870.1 68418.m06701 plastocyanin-like domain-containing
protein contains similarity to SP|Q02917 Early nodulin
55-2 precursor {Glycine max}; PF02298: Plastocyanin-like
domain
Length = 370
Score = 32.7 bits (71), Expect = 0.088
Identities = 23/66 (34%), Positives = 34/66 (51%), Gaps = 1/66 (1%)
Frame = -1
Query: 223 PIPPNEVAMPSRP-FSILSSSIPWSAKLEISFTCPALSLPKLSSAESPKLPNPESWCPNP 47
P+ P S+P S +S + P + IS T PALS P +++ SP P+P P+P
Sbjct: 159 PVAPASAPSKSQPPRSSVSPAQPPKSSSPISHT-PALS-PSHATSHSPATPSPSPKSPSP 216
Query: 46 ESWCPN 29
S P+
Sbjct: 217 VSHSPS 222
>At3g01560.1 68416.m00086 proline-rich family protein contains
proline rich extensin domains, INTERPRO:IPR002965
Length = 511
Score = 32.3 bits (70), Expect = 0.12
Identities = 20/73 (27%), Positives = 32/73 (43%), Gaps = 1/73 (1%)
Frame = -1
Query: 238 PPMAVPIPPNEVAMPSR-PFSILSSSIPWSAKLEISFTCPALSLPKLSSAESPKLPNPES 62
P + P PP+ A PS+ P S L +P + CP S P+ + P P++
Sbjct: 249 PLTSFPQPPSSTAAPSQPPSSQLPPQLPTQFSSQQEPYCPPPSHPQPPPSNPPPYQAPQT 308
Query: 61 WCPNPESWCPNPE 23
P+ S+ P+
Sbjct: 309 QTPHQPSYQSPPQ 321
>At4g24930.1 68417.m03570 thylakoid lumenal 17.9 kDa protein,
chloroplast SP:Q9SW33;GI:17369630;PMID:11719511; similar
to expressed protein gi:12321169 {Oryza sativa}
Length = 225
Score = 31.9 bits (69), Expect = 0.15
Identities = 16/54 (29%), Positives = 29/54 (53%)
Frame = -1
Query: 223 PIPPNEVAMPSRPFSILSSSIPWSAKLEISFTCPALSLPKLSSAESPKLPNPES 62
P E++ S P S+L I ++ + ++ PAL++P LSS++ P +S
Sbjct: 27 PKQEQELSSTSPPISLLPKLISFALAISLTSFSPALAIPSLSSSQPLTTPFTQS 80
>At2g14890.2 68415.m01692 arabinogalactan-protein (AGP9) identical
to gi|10880495|gb|AAG24277
Length = 176
Score = 30.7 bits (66), Expect = 0.36
Identities = 24/81 (29%), Positives = 31/81 (38%)
Frame = -1
Query: 247 VRAPPMAVPIPPNEVAMPSRPFSILSSSIPWSAKLEISFTCPALSLPKLSSAESPKLPNP 68
V +PP A P P + S P + S + P S P A +P P
Sbjct: 74 VSSPPPASPPPATPPPVASPPPPVASPPPATPPPVATPPPAPLASPPAQVPAPAPTT-KP 132
Query: 67 ESWCPNPESWCPNPESWCPXP 5
+S P+P S P P S P P
Sbjct: 133 DSPSPSPSSSPPLPSSDAPGP 153
Score = 28.3 bits (60), Expect = 1.9
Identities = 21/75 (28%), Positives = 32/75 (42%), Gaps = 4/75 (5%)
Frame = -1
Query: 238 PPMAVPIPPNEVAMPSRPFSILSSSIPWSAKLEISFTCPALSL----PKLSSAESPKLPN 71
PP+A P PP P+ P + + A PA + P S + SP LP+
Sbjct: 88 PPVASPPPPVASPPPATPPPVATPPPAPLASPPAQVPAPAPTTKPDSPSPSPSSSPPLPS 147
Query: 70 PESWCPNPESWCPNP 26
++ P+ +S P P
Sbjct: 148 SDAPGPSTDSISPAP 162
>At2g14890.1 68415.m01693 arabinogalactan-protein (AGP9) identical
to gi|10880495|gb|AAG24277
Length = 191
Score = 30.7 bits (66), Expect = 0.36
Identities = 24/81 (29%), Positives = 31/81 (38%)
Frame = -1
Query: 247 VRAPPMAVPIPPNEVAMPSRPFSILSSSIPWSAKLEISFTCPALSLPKLSSAESPKLPNP 68
V +PP A P P + S P + S + P S P A +P P
Sbjct: 74 VSSPPPASPPPATPPPVASPPPPVASPPPATPPPVATPPPAPLASPPAQVPAPAPTT-KP 132
Query: 67 ESWCPNPESWCPNPESWCPXP 5
+S P+P S P P S P P
Sbjct: 133 DSPSPSPSSSPPLPSSDAPGP 153
Score = 28.3 bits (60), Expect = 1.9
Identities = 21/75 (28%), Positives = 32/75 (42%), Gaps = 4/75 (5%)
Frame = -1
Query: 238 PPMAVPIPPNEVAMPSRPFSILSSSIPWSAKLEISFTCPALSL----PKLSSAESPKLPN 71
PP+A P PP P+ P + + A PA + P S + SP LP+
Sbjct: 88 PPVASPPPPVASPPPATPPPVATPPPAPLASPPAQVPAPAPTTKPDSPSPSPSSSPPLPS 147
Query: 70 PESWCPNPESWCPNP 26
++ P+ +S P P
Sbjct: 148 SDAPGPSTDSISPAP 162
>At1g49490.1 68414.m05547 leucine-rich repeat family protein /
extensin family protein contains similarity to disease
resistance protein GI:3894383 from [Lycopersicon
esculentum]; contains leucine-rich repeats,
Pfam:PF00560; contains proline rich extensin domains,
INTERPRO:IPR002965
Length = 847
Score = 29.9 bits (64), Expect = 0.62
Identities = 21/78 (26%), Positives = 30/78 (38%)
Frame = -1
Query: 238 PPMAVPIPPNEVAMPSRPFSILSSSIPWSAKLEISFTCPALSLPKLSSAESPKLPNPESW 59
PPM P PP+ + P P + S ++ P P ++S P P P
Sbjct: 538 PPMPSPSPPSPIYSPPPPVHSPPPPVYSSPPPPHVYSPP----PPVASPPPPSPPPPVHS 593
Query: 58 CPNPESWCPNPESWCPXP 5
P P + P P + P P
Sbjct: 594 PPPPPVFSPPPPVFSPPP 611
Score = 27.5 bits (58), Expect = 3.3
Identities = 25/78 (32%), Positives = 29/78 (37%)
Frame = -1
Query: 238 PPMAVPIPPNEVAMPSRPFSILSSSIPWSAKLEISFTCPALSLPKLSSAESPKLPNPESW 59
PP V PP VA P P P + S P S P S SP P S
Sbjct: 568 PPPHVYSPPPPVASPPPPSPPPPVHSPPPPPV-FSPPPPVFSPPPPSPVYSPP---PPSH 623
Query: 58 CPNPESWCPNPESWCPXP 5
P P + P P ++ P P
Sbjct: 624 SPPPPVYSPPPPTFSPPP 641
>At5g61090.1 68418.m07665 proline-rich family protein contains
proline-rich extensin domains, INTERPRO:IPR002965;
contains similarity to vegetative cell wall protein gp1
[Chlamydomonas reinhardtii] gi|12018147|gb|AAG45420;
common family members: At4g18570, At3g25690, At4g04980
[Arabidopsis thaliana]
Length = 344
Score = 29.5 bits (63), Expect = 0.82
Identities = 24/81 (29%), Positives = 35/81 (43%), Gaps = 1/81 (1%)
Frame = -1
Query: 250 EVRAPPMAVPIPPNEVAMPSRPFSILSSSIPWSAKLEISFTCPA-LSLPKLSSAESPKLP 74
E P A P P +P+RP S + + +P + T P+ +S S SP
Sbjct: 126 ETPRPVTARPTPEIPRPVPARPISEVQTLVP----TRPTSTAPSPVSAHPTSVVPSPVSV 181
Query: 73 NPESWCPNPESWCPNPESWCP 11
+P S P+P S C E+ P
Sbjct: 182 HPTSVAPSPVSACLTSEASKP 202
>At3g60280.1 68416.m06738 uclacyanin 3 (UCC3) identical to
uclacyanin 3 GI:3395770 from [Arabidopsis thaliana];
contains Pfam profile PF02298: Plastocyanin-like domain;
identical to cDNA uclacyanin 3 (UCC3)GI:3395769
Length = 222
Score = 29.5 bits (63), Expect = 0.82
Identities = 27/79 (34%), Positives = 36/79 (45%), Gaps = 2/79 (2%)
Frame = -1
Query: 241 APPMAVPI-PPNEVAMPSRPFSILSS-SIPWSAKLEISFTCPALSLPKLSSAESPKLPNP 68
AP + P PP+ + PS P S S+ S P S S + P SLP +S + P+
Sbjct: 122 APSPSTPSSPPSTPSTPSSPPSTPSTPSSPPSPPSPPSPSLPPSSLPPSASPPTNGTPDS 181
Query: 67 ESWCPNPESWCPNPESWCP 11
E+ P P P P S P
Sbjct: 182 ETLTPPP---APLPPSLSP 197
>At2g27810.2 68415.m03372 xanthine/uracil permease family protein
contains Pfam profile: PF00860 permease family
Length = 660
Score = 29.5 bits (63), Expect = 0.82
Identities = 12/29 (41%), Positives = 15/29 (51%)
Frame = -1
Query: 103 LSSAESPKLPNPESWCPNPESWCPNPESW 17
+SS++ P P W P PES P SW
Sbjct: 1 MSSSDPKPGPKPGPWPPTPESAAMPPSSW 29
>At2g27810.1 68415.m03371 xanthine/uracil permease family protein
contains Pfam profile: PF00860 permease family
Length = 709
Score = 29.5 bits (63), Expect = 0.82
Identities = 12/29 (41%), Positives = 15/29 (51%)
Frame = -1
Query: 103 LSSAESPKLPNPESWCPNPESWCPNPESW 17
+SS++ P P W P PES P SW
Sbjct: 1 MSSSDPKPGPKPGPWPPTPESAAMPPSSW 29
>At5g28440.1 68418.m03454 expressed protein
Length = 276
Score = 29.1 bits (62), Expect = 1.1
Identities = 17/47 (36%), Positives = 22/47 (46%)
Frame = -1
Query: 217 PPNEVAMPSRPFSILSSSIPWSAKLEISFTCPALSLPKLSSAESPKL 77
P + VA SR +LS +S +E F C S SSAE +L
Sbjct: 227 PSSSVASSSRTVKLLSRVADYSCGVETFFACSRGSRGSFSSAEPTRL 273
>At4g18670.1 68417.m02762 leucine-rich repeat family protein /
extensin family protein similar to extensin-like protein
[Lycopersicon esculentum] gi|5917664|gb|AAD55979;
contains leucine-rich repeats, Pfam:PF00560; contains
proline rich extensin domains, INTERPRO:IPR002965
Length = 839
Score = 29.1 bits (62), Expect = 1.1
Identities = 23/74 (31%), Positives = 36/74 (48%), Gaps = 2/74 (2%)
Frame = -1
Query: 241 APPMAVPIPPNEVAMPSRPFSILSSSIPWSAKLEISFTCPALSLPKLSSAES--PKLPNP 68
+PP+ VP PP + P+ P S S S P + S P+ +S ++ P +P+P
Sbjct: 528 SPPITVPSPP---STPTSPGSPPSPSSPTPSSPIPSPPTPSTPPTPISPGQNSPPIIPSP 584
Query: 67 ESWCPNPESWCPNP 26
P+P S P+P
Sbjct: 585 PFTGPSPPS-SPSP 597
>At3g19020.1 68416.m02415 leucine-rich repeat family protein /
extensin family protein similar to extensin-like protein
[Lycopersicon esculentum] gi|5917664|gb|AAD55979;
contains leucine-rich repeats, Pfam:PF00560; contains
proline rich extensin domains, INTERPRO:IPR002965
Length = 956
Score = 28.7 bits (61), Expect = 1.4
Identities = 15/35 (42%), Positives = 17/35 (48%)
Frame = -1
Query: 124 PALSLPKLSSAESPKLPNPESWCPNPESWCPNPES 20
P PK ESPK +P+ P PE P PES
Sbjct: 473 PKTEQPK-PKPESPKQESPKQEAPKPEQPKPKPES 506
Score = 27.9 bits (59), Expect = 2.5
Identities = 24/84 (28%), Positives = 34/84 (40%), Gaps = 3/84 (3%)
Frame = -1
Query: 244 RAPPMAVPIPPNEVAMPSRPFSILSSSIPWSAKLEISFTCPALSLPKLSSAESPKLPNPE 65
+AP I P + PS+P S P + S PK ESPK +P+
Sbjct: 416 KAPEPKKEINPPNLEEPSKP-KPEESPKPQQPSPKPETPSHEPSNPKEPKPESPKQESPK 474
Query: 64 SWCPNPESWCP---NPESWCPXPE 2
+ P P+ P +P+ P PE
Sbjct: 475 TEQPKPKPESPKQESPKQEAPKPE 498
Score = 26.6 bits (56), Expect = 5.8
Identities = 24/75 (32%), Positives = 30/75 (40%), Gaps = 6/75 (8%)
Frame = -1
Query: 247 VRAPPMAVPIPPNEVAMPSRPFSILS------SSIPWSAKLEISFTCPALSLPKLSSAES 86
V +PP V PP V P P I S S P T P + P SS+ES
Sbjct: 785 VHSPPPPVHSPPPPVHSPPPPSPIYSPPPPVFSPPPKPVTPLPPATSPMANAPTPSSSES 844
Query: 85 PKLPNPESWCPNPES 41
++ P P P+S
Sbjct: 845 GEISTPVQ-APTPDS 858
>At2g04780.2 68415.m00489 fasciclin-like arabinogalactan-protein
(FLA7) identical to gi_13377782_gb_AAK20860
Length = 254
Score = 28.7 bits (61), Expect = 1.4
Identities = 15/39 (38%), Positives = 20/39 (51%)
Frame = -1
Query: 283 LDQCLRPFAIFEVRAPPMAVPIPPNEVAMPSRPFSILSS 167
+++ L P AIF PPM P P V+ PS S+ S
Sbjct: 182 VNRVLLPEAIFGTDVPPMPAPAPAPIVSAPSDSPSVADS 220
>At2g04780.1 68415.m00488 fasciclin-like arabinogalactan-protein
(FLA7) identical to gi_13377782_gb_AAK20860
Length = 254
Score = 28.7 bits (61), Expect = 1.4
Identities = 15/39 (38%), Positives = 20/39 (51%)
Frame = -1
Query: 283 LDQCLRPFAIFEVRAPPMAVPIPPNEVAMPSRPFSILSS 167
+++ L P AIF PPM P P V+ PS S+ S
Sbjct: 182 VNRVLLPEAIFGTDVPPMPAPAPAPIVSAPSDSPSVADS 220
>At1g77130.1 68414.m08985 glycogenin glucosyltransferase
(glycogenin)-related contains similarity to glycogenin-1
from Mus musculus [SP|Q9R062], Rattus norvegicus
[SP|O08730], Homo sapiens [SP|P46976]
Length = 618
Score = 28.7 bits (61), Expect = 1.4
Identities = 13/50 (26%), Positives = 25/50 (50%)
Frame = -1
Query: 301 QIVLTCLDQCLRPFAIFEVRAPPMAVPIPPNEVAMPSRPFSILSSSIPWS 152
++VL C+ F I+ R PP+ +P P + + P + ++ I W+
Sbjct: 39 KLVLICI-MLGALFTIYRFRYPPLQIPEIPTSFGLTTDPRYVATAEINWN 87
>At4g13340.1 68417.m02084 leucine-rich repeat family protein /
extensin family protein similar to extensin-like protein
[Lycopersicon esculentum] gi|5917664|gb|AAD55979;
contains leucine-rich repeats, Pfam:PF00560; contains
proline rich extensin domains, INTERPRO:IPR002965
Length = 760
Score = 28.3 bits (60), Expect = 1.9
Identities = 22/80 (27%), Positives = 29/80 (36%), Gaps = 2/80 (2%)
Frame = -1
Query: 238 PPMAVPIPPNEVAMPSRPFSILSSSIPWSAKLEISFTCPALSLPKLSSAESP--KLPNPE 65
PP+ P+PP + P P I S+ ++ S P S P P P P
Sbjct: 396 PPVVTPLPPPSLPSPPPPAPIFSTPPTLTSPPPPSPPPPVYSPPPPPPPPPPVYSPPPPP 455
Query: 64 SWCPNPESWCPNPESWCPXP 5
P P + P P P P
Sbjct: 456 PPPPPPPVYSPPPPPPPPPP 475
>At1g15825.1 68414.m01899 hydroxyproline-rich glycoprotein family
protein contains proline-rich extensin domains,
INTERPRO:IPR002965
Length = 126
Score = 28.3 bits (60), Expect = 1.9
Identities = 21/78 (26%), Positives = 29/78 (37%)
Frame = -1
Query: 238 PPMAVPIPPNEVAMPSRPFSILSSSIPWSAKLEISFTCPALSLPKLSSAESPKLPNPESW 59
PP+ PP + P + PW + SF P S+P + P PNP+
Sbjct: 52 PPVLGDFPPQTPDFTTPP----EVTNPWQPPVT-SFAPPIESIPTIPDNPFPVTPNPDMG 106
Query: 58 CPNPESWCPNPESWCPXP 5
P P P +W P
Sbjct: 107 SNQPFVELP-PPTWDSPP 123
>At1g68725.1 68414.m07853 arabinogalactan-protein, putative (AGP19)
non-consensus splice site at the intron:exon boundary
(AT:exon)
Length = 247
Score = 27.9 bits (59), Expect = 2.5
Identities = 22/85 (25%), Positives = 31/85 (36%), Gaps = 6/85 (7%)
Frame = -1
Query: 241 APPMAVPIPPNEVAMPSRPFS------ILSSSIPWSAKLEISFTCPALSLPKLSSAESPK 80
A P A P+ P P+ P + I ++ P + P +S P +S +P
Sbjct: 64 AQPPASPVTPPPAVTPTSPPAPKVAPVISPATPPPQPPQSPPASAPTVSPPPVSPPPAPT 123
Query: 79 LPNPESWCPNPESWCPNPESWCPXP 5
P P P P P P P P
Sbjct: 124 SPPPTPASPPPAPASPPPAPASPPP 148
>At1g44835.1 68414.m05136 YbaK/prolyl-tRNA synthetase family protein
contains Pfam PF04073: YbaK / prolyl-tRNA synthetases
associated domain; similar to 25.7 kDa protein
(GI:7271117) [Cicer arietinum]
Length = 307
Score = 27.9 bits (59), Expect = 2.5
Identities = 20/71 (28%), Positives = 30/71 (42%), Gaps = 2/71 (2%)
Frame = -1
Query: 244 RAPPMAVPIPPNEVAMPSRPFSILSSSIPW--SAKLEISFTCPALSLPKLSSAESPKLPN 71
+AP +AV +P N V +P P S+ IP S E+ A + +S +
Sbjct: 174 QAPDLAVCVPSNSVIVPEIPNQTSSTQIPLPKSVSAEVKPVASAKTSKPACKVKSVAENS 233
Query: 70 PESWCPNPESW 38
S NPE +
Sbjct: 234 APSAYKNPEKF 244
>At5g65390.1 68418.m08224 arabinogalactan-protein (AGP7)
Length = 130
Score = 27.5 bits (58), Expect = 3.3
Identities = 27/94 (28%), Positives = 37/94 (39%), Gaps = 4/94 (4%)
Frame = -1
Query: 289 TCLDQCLRPFAIFEVRAPPMAVPIP---PNEVAMPSRPFSILSSSIPWSAKLEISFTCPA 119
+CL Q P V PP+A P P P P S +S P S+ S P
Sbjct: 18 SCLAQAPAPSPTTTVTPPPVATPPPAATPAPTTTPPPAVSPAPTSSPPSSAPSPSSDAPT 77
Query: 118 LSLPKLSSAESPKLPNPESWCPNP-ESWCPNPES 20
S P + E P + +P P P ++ P P +
Sbjct: 78 ASPP---APEGPGV-SPGELAPTPSDASAPPPNA 107
>At1g49030.1 68414.m05497 expressed protein similar to PGPS/D12
[Petunia x hybrida] GI:4105794; contains Pfam profile
PF04749: Protein of unknown function, DUF614
Length = 224
Score = 27.5 bits (58), Expect = 3.3
Identities = 14/43 (32%), Positives = 23/43 (53%)
Frame = -2
Query: 183 FRFYLRLYHGLLNWKYPLRVRHCLCQNCRARSHQSYRIRSRGV 55
FR LR +GL + P + HC C+ C A + +++RG+
Sbjct: 151 FRTKLRSKYGLPDAPAPDWITHCFCEYC-ALCQEYRELKNRGL 192
>At5g14540.1 68418.m01704 proline-rich family protein contains
proline rich extensin domains, INTERPRO:IPR002965
Length = 547
Score = 27.1 bits (57), Expect = 4.4
Identities = 22/78 (28%), Positives = 33/78 (42%)
Frame = -1
Query: 238 PPMAVPIPPNEVAMPSRPFSILSSSIPWSAKLEISFTCPALSLPKLSSAESPKLPNPESW 59
PP ++P PP A P S+ +P ++ + LS P L + P+LPN +
Sbjct: 239 PPASLPQPPASAAAPP---SLTQQGLPPQQFIQPPASQHGLSPPSL---QLPQLPN--QF 290
Query: 58 CPNPESWCPNPESWCPXP 5
P E + P P P
Sbjct: 291 SPQQEPYFPPSGQSQPPP 308
>At5g13560.1 68418.m01566 expressed protein weak similarity to
SP|O42184 Restin (Cytoplasmic linker protein-170)
(CLIP-170) {Gallus gallus}
Length = 679
Score = 27.1 bits (57), Expect = 4.4
Identities = 21/72 (29%), Positives = 31/72 (43%), Gaps = 3/72 (4%)
Frame = -1
Query: 226 VPIPPNEVAMPSRPFSILSSSIPWSAKLEISFTCPALSLPKLSSAESPKLPNPESWCP-- 53
+P P + V P + S P S+ + S P+LS+ SP+ PNP +
Sbjct: 583 IPSPRSSVTSPKSSATSPKSPKPSSSSMNASTESTQTQKPELSN--SPQAPNPAAGSSQE 640
Query: 52 -NPESWCPNPES 20
NPE+ ES
Sbjct: 641 FNPEAELAELES 652
>At4g12500.1 68417.m01975 protease inhibitor/seed storage/lipid
transfer protein (LTP) family protein similar to pEARLI
1 (Accession No. L43080): an Arabidopsis member of a
conserved gene family (PGF95-099), Plant Physiol. 109
(4), 1497 (1995); contains Pfam protease inhibitor/seed
storage/LTP family domain PF00234
Length = 177
Score = 27.1 bits (57), Expect = 4.4
Identities = 19/62 (30%), Positives = 26/62 (41%), Gaps = 1/62 (1%)
Frame = -1
Query: 235 PMAVPIPPNEVAMPSRPF-SILSSSIPWSAKLEISFTCPALSLPKLSSAESPKLPNPESW 59
P VP P +V P P SI S S+P + S P++ P + P+ P
Sbjct: 36 PRTVPSP--KVPSPKYPSPSIPSPSVPTPSVPTPSVPTPSVPSPNPTPVTPPRTPGSSGN 93
Query: 58 CP 53
CP
Sbjct: 94 CP 95
>At2g35630.1 68415.m04369 microtubule organization 1 protein (MOR1)
identical to microtubule organization 1 protein
GI:14317953 from [Arabidopsis thaliana]
Length = 1978
Score = 27.1 bits (57), Expect = 4.4
Identities = 14/36 (38%), Positives = 18/36 (50%)
Frame = -1
Query: 169 SSIPWSAKLEISFTCPALSLPKLSSAESPKLPNPES 62
SS+P S S P+ +P LSS + L NP S
Sbjct: 1844 SSLPLSTPPPSSLALPSPDIPSLSSLDVKPLMNPRS 1879
>At2g28440.1 68415.m03455 proline-rich family protein contains
proline-rich extensin domains, INTERPRO:IPR002965;
contains similarity to vegetative cell wall protein gp1
[Chlamydomonas reinhardtii] gi|12018147|gb|AAG45420; +
Length = 268
Score = 27.1 bits (57), Expect = 4.4
Identities = 24/85 (28%), Positives = 38/85 (44%), Gaps = 6/85 (7%)
Frame = -1
Query: 238 PPMAVPIPPNEVAMPSRPFSILSSSIPWSAKLEISFTCPALSLPKLSS----AESPKLPN 71
PP + P + +A S P + S + S+ E+ P S P+ S + SP+ +
Sbjct: 70 PPSSSPEEDSPLAPSSSPE--VDSPLAPSSSPEVDSPQPPSSSPEADSPLPPSSSPEANS 127
Query: 70 PESWC--PNPESWCPNPESWCPXPE 2
P+S P PES +P P P+
Sbjct: 128 PQSPASSPKPESLADSPSPPPPPPQ 152
Score = 26.2 bits (55), Expect = 7.6
Identities = 25/94 (26%), Positives = 39/94 (41%), Gaps = 9/94 (9%)
Frame = -1
Query: 265 PFAIFEVRAPPMAVPIPPNEVAMPSRPFSILSSS-----IPWSAKLEISFTCPALSLPKL 101
P A+ R P P+ P+ P S SS +P S+ E S P++
Sbjct: 30 PAAVSPGREPSTDSPLSPSSSPEEDSPLSPSSSPEEDSPLPPSSSPEEDSPLAPSSSPEV 89
Query: 100 SS----AESPKLPNPESWCPNPESWCPNPESWCP 11
S + SP++ +P+ +PE+ P P S P
Sbjct: 90 DSPLAPSSSPEVDSPQPPSSSPEADSPLPPSSSP 123
>At5g38560.1 68418.m04662 protein kinase family protein contains
protein kinase domain, Pfam:PF00069
Length = 681
Score = 26.6 bits (56), Expect = 5.8
Identities = 23/82 (28%), Positives = 34/82 (41%)
Frame = -1
Query: 247 VRAPPMAVPIPPNEVAMPSRPFSILSSSIPWSAKLEISFTCPALSLPKLSSAESPKLPNP 68
V +PP + PP+ + S P ++ SS P + PA + P SP P P
Sbjct: 61 VSSPPPSSSPPPSPPVITSPPPTVASSPPPPVVIASPPPSTPATTPPAPPQTVSP--PPP 118
Query: 67 ESWCPNPESWCPNPESWCPXPE 2
P+P P P + P P+
Sbjct: 119 PDASPSP----PAPTTTNPPPK 136
>At5g03360.1 68418.m00289 DC1 domain-containing protein contains Pfam
profile PF03107: DC1 domain
Length = 1610
Score = 26.6 bits (56), Expect = 5.8
Identities = 15/48 (31%), Positives = 19/48 (39%)
Frame = -2
Query: 219 YRPMKWQCLQGPFRFYLRLYHGLLNWKYPLRVRHCLCQNCRARSHQSY 76
Y PMKW CLQ + LL H C+ C +H+ Y
Sbjct: 1198 YIPMKWDCLQ--------VNWNLLKLPGENDFTHFRCRGCNGENHKGY 1237
>At4g15160.1 68417.m02327 protease inhibitor/seed storage/lipid
transfer protein (LTP) family protein similar to
SP|Q00451|PRF1_LYCES 36.4 kDa proline-rich protein
Lycopersicon esculentum, proline-rich cell wall protein
[Medicago sativa] GI:3818416; contains Pfam profile
PF00234 Protease inhibitor/seed storage/LTP family
Length = 428
Score = 26.6 bits (56), Expect = 5.8
Identities = 24/80 (30%), Positives = 30/80 (37%), Gaps = 2/80 (2%)
Frame = -1
Query: 238 PPMAVPIPPNEVAMPSRPFSILSSSIPWSAKLEISFT--CPALSLPKLSSAESPKLPNPE 65
PP P PP V P P+ + P + K T P P + K P P
Sbjct: 92 PPYVKPPPPPTVKPPPPPY--VKPPPPPTVKPPPPPTPYTPPPPTPYTPPPPTVKPPPPP 149
Query: 64 SWCPNPESWCPNPESWCPXP 5
P P + P PE+ CP P
Sbjct: 150 VVTPPPPT--PTPEAPCPPP 167
>At2g18510.1 68415.m02157 pre-mRNA splicing factor, putative similar
to SP|Q15427 Splicing factor 3B subunit 4 (Spliceosome
associated protein 49) (SAP 49) (SF3b50) (Pre-mRNA
splicing factor SF3b 49 kDa subunit) {Homo sapiens};
contains Pfam profile PF00076: RNA recognition motif.
(a.k.a. RRM, RBD, or RNP domain)
Length = 363
Score = 26.6 bits (56), Expect = 5.8
Identities = 20/75 (26%), Positives = 30/75 (40%), Gaps = 6/75 (8%)
Frame = -1
Query: 211 NEVAMPSRPFSILSSSIPWSAK----LEISFTCPALSLPKLSSAESPKLPNPESWCPNPE 44
N A SRP ++ + P SA L F ++ + + P P P+ + P
Sbjct: 211 NPTAQKSRPHTLFAMGPPSSAPQVNGLPRPFANGSMQPVPIPAPRQPPPPPPQVYQTQPP 270
Query: 43 SWCPNPE--SWCPXP 5
SW P+ S P P
Sbjct: 271 SWPSQPQQHSMVPPP 285
>At2g07714.1 68415.m00964 transcription factor-related similar to
male sterility 1 proteins (GI:15554513,GI:15554515))
[Arabidopsis thaliana]
Length = 196
Score = 26.6 bits (56), Expect = 5.8
Identities = 16/42 (38%), Positives = 22/42 (52%), Gaps = 3/42 (7%)
Frame = -1
Query: 307 VKQIVLTCLDQCLRPFAIFEVRAPPMAVPIPPNE---VAMPS 191
+ +I LT L LR + RAPP+ +PI E V +PS
Sbjct: 100 MSEIQLTTLQDLLRFMLTIKSRAPPIRIPIGKIEAPSVVLPS 141
>At4g19020.1 68417.m02803 chromomethylase 2 (CMT2) nearly identical
to chromomethylase CMT2 [Arabidopsis thaliana]
GI:14583094
Length = 1295
Score = 26.2 bits (55), Expect = 7.6
Identities = 10/24 (41%), Positives = 13/24 (54%)
Frame = -1
Query: 100 SSAESPKLPNPESWCPNPESWCPN 29
SS P+ + WCPNPE P+
Sbjct: 21 SSRSEPECLSLVLWCPNPEEAAPS 44
>At3g60270.1 68416.m06737 uclacyanin, putative similar to uclacyanin
3 GI:3395770 from [Arabidopsis thaliana]; contains Pfam
profile PF02298: Plastocyanin-like domain
Length = 187
Score = 26.2 bits (55), Expect = 7.6
Identities = 12/45 (26%), Positives = 17/45 (37%)
Frame = -1
Query: 160 PWSAKLEISFTCPALSLPKLSSAESPKLPNPESWCPNPESWCPNP 26
P L + L+ L SP P+P P+P P+P
Sbjct: 107 PGHCSLGMKLAVQVLAAVSLEPPPSPSAPSPSPSAPSPSPSAPSP 151
>At3g24550.1 68416.m03083 protein kinase family protein contains
Pfam domain PF00069: Protein kinase domain
Length = 652
Score = 26.2 bits (55), Expect = 7.6
Identities = 26/75 (34%), Positives = 35/75 (46%), Gaps = 1/75 (1%)
Frame = -1
Query: 241 APPMAVPIPPNEVAMPSRPFSILSSSIPWSAKLEISFTCPALSLPKLSSAESPKLP-NPE 65
+PP + P+PP+ + PS P S L+ +P P+ S P S SP P NP
Sbjct: 53 SPPPSSPLPPS-LPPPSPPGS-LTPPLPQ----------PSPSAPITPSPPSPTTPSNPR 100
Query: 64 SWCPNPESWCPNPES 20
S P+P PN S
Sbjct: 101 S-PPSPNQGPPNTPS 114
>At2g06200.1 68415.m00682 expressed protein
Length = 244
Score = 26.2 bits (55), Expect = 7.6
Identities = 15/38 (39%), Positives = 21/38 (55%)
Frame = -1
Query: 226 VPIPPNEVAMPSRPFSILSSSIPWSAKLEISFTCPALS 113
+P+PP+ + + RPF SSS S+ SF P LS
Sbjct: 29 MPVPPHLLFLIKRPFLFSSSS---SSSSSSSFFSPTLS 63
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 7,153,330
Number of Sequences: 28952
Number of extensions: 155052
Number of successful extensions: 639
Number of sequences better than 10.0: 38
Number of HSP's better than 10.0 without gapping: 554
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 621
length of database: 12,070,560
effective HSP length: 73
effective length of database: 9,957,064
effective search space used: 547638520
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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