Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= epV30547
         (516 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ414246-1|ABD63008.1|  126|Tribolium castaneum odd-skipped prot...    22   3.7  
X91618-1|CAA62821.1|  524|Tribolium castaneum hunchback protein.       21   8.6  
EF222296-1|ABN79656.2|  403|Tribolium castaneum arginine vasopre...    21   8.6  
DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    21   8.6  
AY695258-1|AAW21975.1|  232|Tribolium castaneum muscle segment h...    21   8.6  
AM292378-1|CAL23190.2|  387|Tribolium castaneum gustatory recept...    21   8.6  
AJ223614-1|CAA11490.1|  301|Tribolium castaneum orthodenticle-2 ...    21   8.6  

>DQ414246-1|ABD63008.1|  126|Tribolium castaneum odd-skipped
           protein.
          Length = 126

 Score = 21.8 bits (44), Expect = 3.7
 Identities = 11/33 (33%), Positives = 16/33 (48%)
 Frame = +2

Query: 338 CRYQLRTATRKRSLLPSATREPDLQPHSSDRTG 436
           C+Y  R  T+  +LL       D +P+S D  G
Sbjct: 82  CKYCNRQFTKSYNLLIHERTHTDERPYSCDICG 114


>X91618-1|CAA62821.1|  524|Tribolium castaneum hunchback protein.
          Length = 524

 Score = 20.6 bits (41), Expect = 8.6
 Identities = 10/46 (21%), Positives = 17/46 (36%)
 Frame = +3

Query: 378 YYPQQPENPIFSPTQATELADPTEKIELYSTTLVPVAKATEAPAAP 515
           ++   P +      Q +  +  T+    YST +VP       P  P
Sbjct: 63  FHSSSPSSDTSQDLQHSYQSPQTQPARFYSTPIVPHFAYNHNPLTP 108


>EF222296-1|ABN79656.2|  403|Tribolium castaneum arginine
           vasopressin receptor protein.
          Length = 403

 Score = 20.6 bits (41), Expect = 8.6
 Identities = 7/17 (41%), Positives = 11/17 (64%)
 Frame = +2

Query: 455 RIVLHHFGTGCQGYRSA 505
           R++L H+    + YRSA
Sbjct: 328 RLLLRHYTASSKNYRSA 344


>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 protein.
          Length = 2700

 Score = 20.6 bits (41), Expect = 8.6
 Identities = 6/8 (75%), Positives = 7/8 (87%)
 Frame = -1

Query: 351  SWYRQGSG 328
            +WYRQG G
Sbjct: 2331 AWYRQGDG 2338


>AY695258-1|AAW21975.1|  232|Tribolium castaneum muscle segment
           homeodomain protein protein.
          Length = 232

 Score = 20.6 bits (41), Expect = 8.6
 Identities = 10/22 (45%), Positives = 14/22 (63%)
 Frame = +1

Query: 286 RRLQRARCTYLIVAARPLPIPA 351
           +RLQ A    L ++ARPL  P+
Sbjct: 171 KRLQEAELEKLRLSARPLLPPS 192


>AM292378-1|CAL23190.2|  387|Tribolium castaneum gustatory receptor
           candidate 57 protein.
          Length = 387

 Score = 20.6 bits (41), Expect = 8.6
 Identities = 6/10 (60%), Positives = 7/10 (70%)
 Frame = +1

Query: 106 YWCKRIPTIP 135
           YW   IPT+P
Sbjct: 320 YWLNEIPTMP 329


>AJ223614-1|CAA11490.1|  301|Tribolium castaneum orthodenticle-2
           protein protein.
          Length = 301

 Score = 20.6 bits (41), Expect = 8.6
 Identities = 8/14 (57%), Positives = 9/14 (64%)
 Frame = +3

Query: 120 YPYNPYYGNVDSLS 161
           Y   PYY N+D LS
Sbjct: 253 YNNYPYYSNMDYLS 266


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 123,751
Number of Sequences: 336
Number of extensions: 3014
Number of successful extensions: 7
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 122,585
effective HSP length: 53
effective length of database: 104,777
effective search space used: 12363686
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)