Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= epV30547
(516 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At5g66060.1 68418.m08323 oxidoreductase, 2OG-Fe(II) oxygenase fa... 29 1.4
At5g16220.1 68418.m01895 octicosapeptide/Phox/Bem1p (PB1) domain... 29 1.4
At1g20270.1 68414.m02531 oxidoreductase, 2OG-Fe(II) oxygenase fa... 29 1.9
At3g13060.2 68416.m01628 expressed protein contains Pfam profile... 29 2.5
At3g13060.1 68416.m01627 expressed protein contains Pfam profile... 29 2.5
At2g33410.1 68415.m04095 heterogeneous nuclear ribonucleoprotein... 29 2.5
At3g57170.1 68416.m06365 N-acetylglucosaminyl transferase compon... 28 3.2
At4g26830.1 68417.m03863 glycosyl hydrolase family 17 protein si... 28 4.3
At5g28120.1 68418.m03396 hypothetical protein 27 5.7
At5g28110.1 68418.m03395 hypothetical protein 27 5.7
At5g18510.1 68418.m02185 hypothetical protein 27 5.7
At4g37130.1 68417.m05258 hydroxyproline-rich glycoprotein family... 27 7.5
At4g26930.1 68417.m03875 myb family transcription factor (MYB97)... 27 7.5
At3g60370.1 68416.m06752 immunophilin / FKBP-type peptidyl-proly... 27 7.5
At3g54100.1 68416.m05981 expressed protein similar to axi 1 [Nic... 27 7.5
At2g28700.1 68415.m03488 MADS-box protein-related contains INTER... 27 7.5
At3g44530.1 68416.m04786 transducin family protein / WD-40 repea... 27 9.9
At1g74230.1 68414.m08597 glycine-rich RNA-binding protein simila... 27 9.9
At1g51540.1 68414.m05801 kelch repeat-containing protein contain... 27 9.9
At1g21450.1 68414.m02682 scarecrow-like transcription factor 1 (... 27 9.9
At1g14430.1 68414.m01711 glyoxal oxidase-related low similarity ... 27 9.9
>At5g66060.1 68418.m08323 oxidoreductase, 2OG-Fe(II) oxygenase
family protein similar to prolyl 4-hydroxylase, alpha
subunit, from Rattus norvegicus [GI:474940], Mus
musculus [SP|Q60715], Homo sapiens [GI:18073925];
contains PF03171 2OG-Fe(II) oxygenase superfamily domain
Length = 267
Score = 29.5 bits (63), Expect = 1.4
Identities = 18/48 (37%), Positives = 23/48 (47%)
Frame = +1
Query: 283 HRRLQRARCTYLIVAARPLPIPATYRNKKTKSITLSNQRTRSSAPLKR 426
H L + C YLI A+P +T ++KT T S RT S L R
Sbjct: 91 HNFLTKEECKYLIELAKPHMEKSTVVDEKTGKSTDSRVRTSSGTFLAR 138
>At5g16220.1 68418.m01895 octicosapeptide/Phox/Bem1p (PB1)
domain-containing protein hypothetical proteins -
Arabidopsis thaliana contains Pfam profile PF00564: PB1
domain
Length = 476
Score = 29.5 bits (63), Expect = 1.4
Identities = 21/57 (36%), Positives = 27/57 (47%), Gaps = 2/57 (3%)
Frame = +3
Query: 246 GMAAFMYR-QPEAAQAPSTGQVYIPDRRRQTLADTSYVPQQENEVYYPQQPE-NPIF 410
G FM + Q + Q TGQ YI TL T+Y N VYY + P+ PI+
Sbjct: 317 GYPPFMNQAQQQHIQVIYTGQPYITGNSPMTLPATAY--HHTNHVYYQRPPQPYPIY 371
>At1g20270.1 68414.m02531 oxidoreductase, 2OG-Fe(II) oxygenase
family protein similar to prolyl 4-hydroxylase, alpha
subunit, from Gallus gallus [GI:212530], Rattus
norvegicus [GI:474940], Mus musculus [SP|Q60715];
contains PF03171 2OG-Fe(II) oxygenase superfamily domain
Length = 287
Score = 29.1 bits (62), Expect = 1.9
Identities = 16/48 (33%), Positives = 23/48 (47%)
Frame = +1
Query: 283 HRRLQRARCTYLIVAARPLPIPATYRNKKTKSITLSNQRTRSSAPLKR 426
H L + C YLI A+P + +T + +T S RT S L+R
Sbjct: 89 HNFLSKEECEYLISLAKPHMVKSTVVDSETGKSKDSRVRTSSGTFLRR 136
>At3g13060.2 68416.m01628 expressed protein contains Pfam profile
PF04146: YT521-B-like family
Length = 634
Score = 28.7 bits (61), Expect = 2.5
Identities = 29/92 (31%), Positives = 38/92 (41%), Gaps = 5/92 (5%)
Frame = +3
Query: 138 YGNVDSLSYGS--GDSNRGGLVMSRYYNPYYNPRAVGGGMAAFMYRQPEAAQAPSTGQVY 311
Y NV+ L S G + LV Y YNP+ G + P A+ PS GQ+Y
Sbjct: 100 YVNVEGLDITSPVGFNENASLVYQTGYG--YNPQMPYGPYS------PAASPLPSEGQLY 151
Query: 312 IPDRRRQTLADTSY---VPQQENEVYYPQQPE 398
P + + A Y VP + P QPE
Sbjct: 152 SPQQFPFSGASPYYQQVVPPSMQYITSPTQPE 183
>At3g13060.1 68416.m01627 expressed protein contains Pfam profile
PF04146: YT521-B-like family
Length = 551
Score = 28.7 bits (61), Expect = 2.5
Identities = 29/92 (31%), Positives = 38/92 (41%), Gaps = 5/92 (5%)
Frame = +3
Query: 138 YGNVDSLSYGS--GDSNRGGLVMSRYYNPYYNPRAVGGGMAAFMYRQPEAAQAPSTGQVY 311
Y NV+ L S G + LV Y YNP+ G + P A+ PS GQ+Y
Sbjct: 100 YVNVEGLDITSPVGFNENASLVYQTGYG--YNPQMPYGPYS------PAASPLPSEGQLY 151
Query: 312 IPDRRRQTLADTSY---VPQQENEVYYPQQPE 398
P + + A Y VP + P QPE
Sbjct: 152 SPQQFPFSGASPYYQQVVPPSMQYITSPTQPE 183
>At2g33410.1 68415.m04095 heterogeneous nuclear ribonucleoprotein,
putative / hnRNP, putative
Length = 404
Score = 28.7 bits (61), Expect = 2.5
Identities = 22/61 (36%), Positives = 25/61 (40%), Gaps = 4/61 (6%)
Frame = +3
Query: 126 YNPYYGNVDSLSYGSGDSNRGGLVMSRYYN----PYYNPRAVGGGMAAFMYRQPEAAQAP 293
Y PY G+ YG G + G Y N PY NP G G + R AQAP
Sbjct: 238 YPPYGGSGYGTGYGYGSNGVGYGGFGGYGNPAGAPYGNPSVPGAGFGSGP-RSSWGAQAP 296
Query: 294 S 296
S
Sbjct: 297 S 297
>At3g57170.1 68416.m06365 N-acetylglucosaminyl transferase component
family protein / Gpi1 family protein similar to
SP|O14357 N-acetylglucosaminyl-phosphatidylinositol
biosynthetic protein gpi1 {Schizosaccharomyces pombe};
contains Pfam profile PF05024: N-acetylglucosaminyl
transferase component (Gpi1)
Length = 560
Score = 28.3 bits (60), Expect = 3.2
Identities = 10/24 (41%), Positives = 16/24 (66%)
Frame = +1
Query: 376 SITLSNQRTRSSAPLKRPNWLTPL 447
S++ SN ++ APLK+P W+ L
Sbjct: 49 SLSFSNSSPQTKAPLKKPKWVDDL 72
>At4g26830.1 68417.m03863 glycosyl hydrolase family 17 protein
similar to elicitor inducible chitinase Nt-SubE76
GI:11071974 from [Nicotiana tabacum]
Length = 448
Score = 27.9 bits (59), Expect = 4.3
Identities = 16/47 (34%), Positives = 24/47 (51%), Gaps = 3/47 (6%)
Frame = +3
Query: 63 IMKVMYAFVMMSCA-LLVQAYPYNPYYGNVD--SLSYGSGDSNRGGL 194
++K M A + + + L+V AYP+ Y N D SL Y N G +
Sbjct: 179 VVKPMLALLQQTSSYLMVNAYPFFAYAANADKISLDYALFKENAGNI 225
>At5g28120.1 68418.m03396 hypothetical protein
Length = 506
Score = 27.5 bits (58), Expect = 5.7
Identities = 10/24 (41%), Positives = 16/24 (66%)
Frame = +3
Query: 135 YYGNVDSLSYGSGDSNRGGLVMSR 206
Y GN+D + +G GD ++ L+ SR
Sbjct: 122 YVGNIDRVRWGPGDKDQKTLIKSR 145
>At5g28110.1 68418.m03395 hypothetical protein
Length = 493
Score = 27.5 bits (58), Expect = 5.7
Identities = 10/24 (41%), Positives = 16/24 (66%)
Frame = +3
Query: 135 YYGNVDSLSYGSGDSNRGGLVMSR 206
Y GN+D + +G GD ++ L+ SR
Sbjct: 122 YVGNIDRVRWGPGDKDQKTLIKSR 145
>At5g18510.1 68418.m02185 hypothetical protein
Length = 702
Score = 27.5 bits (58), Expect = 5.7
Identities = 9/20 (45%), Positives = 15/20 (75%)
Frame = +3
Query: 399 NPIFSPTQATELADPTEKIE 458
+P+FSP + +E+ D EK+E
Sbjct: 137 SPVFSPLECSEMRDSAEKLE 156
>At4g37130.1 68417.m05258 hydroxyproline-rich glycoprotein family
protein
Length = 513
Score = 27.1 bits (57), Expect = 7.5
Identities = 15/42 (35%), Positives = 21/42 (50%), Gaps = 2/42 (4%)
Frame = +3
Query: 303 QVYIPDRRRQTLADTSYVPQQENEVYYPQQPE--NPIFSPTQ 422
Q P QT + + PQQ N ++ QP+ N IFS +Q
Sbjct: 8 QQQTPQPLFQTQQTSLFQPQQTNSIFSQSQPQQTNSIFSQSQ 49
>At4g26930.1 68417.m03875 myb family transcription factor (MYB97)
contains Pfam profile: PF00249 myb-like DNA-binding
domain ;similar to anther-specific myb-related protein 2
GI:11066263 from [Nicotiana tabacum]
Length = 389
Score = 27.1 bits (57), Expect = 7.5
Identities = 13/41 (31%), Positives = 18/41 (43%)
Frame = +3
Query: 321 RRRQTLADTSYVPQQENEVYYPQQPENPIFSPTQATELADP 443
R+ L Y + YPQQP +P+ S T A+ P
Sbjct: 124 RQGLPLYPPEYSQNNHQQQMYPQQPSSPLPSQTPASSFTFP 164
>At3g60370.1 68416.m06752 immunophilin / FKBP-type peptidyl-prolyl
cis-trans isomerase family protein SP:Q9M222; similar to
FKBP-type peptidyl-prolyl cis-trans isomerase fkpA
precursor (PPiase) (Rotamase)(SP:Q8X880) [Escherichia
coli O157:H7] ; contains Pfam PF00254: peptidyl-prolyl
cis-trans isomerase, FKBP-type
Length = 242
Score = 27.1 bits (57), Expect = 7.5
Identities = 16/47 (34%), Positives = 27/47 (57%), Gaps = 1/47 (2%)
Frame = +1
Query: 262 CTASPKPHRR-LQRARCTYLIVAARPLPIPATYRNKKTKSITLSNQR 399
C+ S +P + L R Y++VA+ L +PA + KTKS + ++R
Sbjct: 32 CSLSEEPKDQCLSRRSLVYVLVASPCLLLPALSSSAKTKSKSPYDER 78
>At3g54100.1 68416.m05981 expressed protein similar to axi 1
[Nicotiana tabacum] GI:559921; contains Pfam profile
PF03138: Plant protein family
Length = 638
Score = 27.1 bits (57), Expect = 7.5
Identities = 15/37 (40%), Positives = 18/37 (48%), Gaps = 3/37 (8%)
Frame = +1
Query: 229 PELWAVVWP---RSCTASPKPHRRLQRARCTYLIVAA 330
PE+W R C PK + RLQR YL+V A
Sbjct: 194 PEIWQKPESGNYRQCVTRPKNYTRLQRQTNGYLVVHA 230
>At2g28700.1 68415.m03488 MADS-box protein-related contains
INTERPRO: IPR002100 MADS-box domain
Length = 329
Score = 27.1 bits (57), Expect = 7.5
Identities = 12/47 (25%), Positives = 22/47 (46%), Gaps = 3/47 (6%)
Frame = +3
Query: 291 PSTGQVYIPDRRRQTLAD---TSYVPQQENEVYYPQQPENPIFSPTQ 422
P Q IP + D ++++P EVY P ++ +++P Q
Sbjct: 248 PDMNQSIIPSNQGAEHVDFLESNFLPNNNQEVYIPVMDQDEVYNPNQ 294
>At3g44530.1 68416.m04786 transducin family protein / WD-40 repeat
family protein contains 6 (4 significant) WD-40 repeats
(PF0400); nuclear protein HIRA, mouse, PIR:S68141
Length = 1051
Score = 26.6 bits (56), Expect = 9.9
Identities = 16/47 (34%), Positives = 24/47 (51%), Gaps = 1/47 (2%)
Frame = +3
Query: 288 APSTGQVYI-PDRRRQTLADTSYVPQQENEVYYPQQPENPIFSPTQA 425
+P +VY PD R++ + + VPQQEN + + N F P A
Sbjct: 464 SPVNQKVYRRPDGRKRIIPEAVGVPQQENNIMINGESHN--FLPASA 508
>At1g74230.1 68414.m08597 glycine-rich RNA-binding protein similar
to RNA-binding protein GB:S46286 from [Nicotiana
sylvestris]
Length = 289
Score = 26.6 bits (56), Expect = 9.9
Identities = 15/38 (39%), Positives = 18/38 (47%)
Frame = +3
Query: 135 YYGNVDSLSYGSGDSNRGGLVMSRYYNPYYNPRAVGGG 248
Y GN G+S+ GG NP Y+ AVGGG
Sbjct: 155 YSGNAGGGGGYGGNSSYGGNAGGYGGNPPYSGNAVGGG 192
>At1g51540.1 68414.m05801 kelch repeat-containing protein contains
Pfam profile PF01344: Kelch motif
Length = 1036
Score = 26.6 bits (56), Expect = 9.9
Identities = 8/20 (40%), Positives = 16/20 (80%)
Frame = +3
Query: 399 NPIFSPTQATELADPTEKIE 458
+P+F+P +++E+ D EK+E
Sbjct: 71 SPVFAPLESSEMRDSVEKLE 90
>At1g21450.1 68414.m02682 scarecrow-like transcription factor 1
(SCL1) identical to scarecrow-like 1 GB:AAF21043
GI:6644390 from [Arabidopsis thaliana]
Length = 593
Score = 26.6 bits (56), Expect = 9.9
Identities = 14/35 (40%), Positives = 19/35 (54%), Gaps = 1/35 (2%)
Frame = +3
Query: 294 STGQVYIPDR-RRQTLADTSYVPQQENEVYYPQQP 395
S+ Q++ PDR + L D SY P Q E Y+ P
Sbjct: 45 SSAQIFDPDRSKNPCLTDDSY-PSQSYEKYFLDSP 78
>At1g14430.1 68414.m01711 glyoxal oxidase-related low similarity to
glyoxal oxidase precursor (glx1) [Phanerochaete
chrysosporium] GI:1050302
Length = 849
Score = 26.6 bits (56), Expect = 9.9
Identities = 11/32 (34%), Positives = 16/32 (50%)
Frame = +3
Query: 369 NEVYYPQQPENPIFSPTQATELADPTEKIELY 464
N +YP+ P +F+ E DP E+ LY
Sbjct: 193 NYEFYPKDPGESVFNLRFLAETRDPNEENNLY 224
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,472,304
Number of Sequences: 28952
Number of extensions: 254458
Number of successful extensions: 795
Number of sequences better than 10.0: 21
Number of HSP's better than 10.0 without gapping: 764
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 795
length of database: 12,070,560
effective HSP length: 76
effective length of database: 9,870,208
effective search space used: 937669760
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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