Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= epV30546
(516 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_20899| Best HMM Match : RRM_1 (HMM E-Value=2.3e-15) 60 1e-09
SB_41412| Best HMM Match : RRM_1 (HMM E-Value=2.9e-35) 54 5e-08
SB_51896| Best HMM Match : No HMM Matches (HMM E-Value=.) 53 2e-07
SB_37500| Best HMM Match : RRM_1 (HMM E-Value=7.3e-38) 50 1e-06
SB_37749| Best HMM Match : No HMM Matches (HMM E-Value=.) 50 2e-06
SB_46050| Best HMM Match : RRM_1 (HMM E-Value=1.7e-33) 49 3e-06
SB_59562| Best HMM Match : RRM_1 (HMM E-Value=6.1e-23) 46 1e-05
SB_29861| Best HMM Match : RRM_1 (HMM E-Value=1.10002e-42) 46 2e-05
SB_52333| Best HMM Match : RRM_1 (HMM E-Value=2.3e-16) 46 2e-05
SB_17244| Best HMM Match : No HMM Matches (HMM E-Value=.) 46 2e-05
SB_37198| Best HMM Match : RRM_1 (HMM E-Value=7.8e-23) 45 3e-05
SB_971| Best HMM Match : No HMM Matches (HMM E-Value=.) 45 4e-05
SB_44114| Best HMM Match : RRM_1 (HMM E-Value=9.9e-35) 44 6e-05
SB_23532| Best HMM Match : No HMM Matches (HMM E-Value=.) 44 6e-05
SB_31414| Best HMM Match : No HMM Matches (HMM E-Value=.) 44 7e-05
SB_11682| Best HMM Match : No HMM Matches (HMM E-Value=.) 44 1e-04
SB_45423| Best HMM Match : RRM_1 (HMM E-Value=0) 43 1e-04
SB_2700| Best HMM Match : RRM_1 (HMM E-Value=0) 42 2e-04
SB_38796| Best HMM Match : RRM_1 (HMM E-Value=0) 42 4e-04
SB_40573| Best HMM Match : RRM_1 (HMM E-Value=1.8e-39) 42 4e-04
SB_33046| Best HMM Match : RRM_1 (HMM E-Value=3.6e-13) 42 4e-04
SB_2543| Best HMM Match : No HMM Matches (HMM E-Value=.) 42 4e-04
SB_53534| Best HMM Match : RRM_1 (HMM E-Value=1e-18) 41 5e-04
SB_27480| Best HMM Match : RRM_1 (HMM E-Value=3.7e-18) 41 7e-04
SB_42891| Best HMM Match : DUF537 (HMM E-Value=1.2e-23) 41 7e-04
SB_1873| Best HMM Match : No HMM Matches (HMM E-Value=.) 41 7e-04
SB_41429| Best HMM Match : No HMM Matches (HMM E-Value=.) 40 0.002
SB_8450| Best HMM Match : RRM_1 (HMM E-Value=1.7e-36) 40 0.002
SB_23537| Best HMM Match : No HMM Matches (HMM E-Value=.) 40 0.002
SB_7937| Best HMM Match : No HMM Matches (HMM E-Value=.) 39 0.002
SB_28070| Best HMM Match : RRM_1 (HMM E-Value=1.3e-07) 38 0.004
SB_50249| Best HMM Match : RRM_1 (HMM E-Value=0) 37 0.009
SB_57661| Best HMM Match : RRM_1 (HMM E-Value=0.017) 37 0.011
SB_34757| Best HMM Match : No HMM Matches (HMM E-Value=.) 37 0.011
SB_33676| Best HMM Match : No HMM Matches (HMM E-Value=.) 37 0.011
SB_28089| Best HMM Match : No HMM Matches (HMM E-Value=.) 36 0.015
SB_46162| Best HMM Match : No HMM Matches (HMM E-Value=.) 36 0.015
SB_41866| Best HMM Match : RRM_1 (HMM E-Value=0) 36 0.026
SB_48466| Best HMM Match : Pro_isomerase (HMM E-Value=0) 35 0.035
SB_27005| Best HMM Match : NTF2 (HMM E-Value=1.1e-33) 35 0.035
SB_8823| Best HMM Match : No HMM Matches (HMM E-Value=.) 35 0.035
SB_17242| Best HMM Match : No HMM Matches (HMM E-Value=.) 35 0.046
SB_24938| Best HMM Match : No HMM Matches (HMM E-Value=.) 34 0.060
SB_11106| Best HMM Match : RRM_1 (HMM E-Value=1.8e-11) 34 0.080
SB_28139| Best HMM Match : RRM_1 (HMM E-Value=3.7e-28) 33 0.11
SB_37378| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.14
SB_51113| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 0.24
SB_18756| Best HMM Match : Sterol_desat (HMM E-Value=0) 32 0.32
SB_6474| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 0.32
SB_53070| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.56
SB_3536| Best HMM Match : RRM_1 (HMM E-Value=0) 30 1.3
SB_23536| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 1.7
SB_29577| Best HMM Match : RRM_1 (HMM E-Value=8.5e-15) 29 2.3
SB_15287| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.3
SB_57433| Best HMM Match : RRM_1 (HMM E-Value=4.5e-24) 29 3.0
SB_52510| Best HMM Match : RRM_1 (HMM E-Value=8.1e-21) 29 3.0
SB_43406| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.0
SB_35697| Best HMM Match : RRM_1 (HMM E-Value=1.3e-19) 29 3.0
SB_43251| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.0
SB_19711| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.0
SB_47831| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 4.0
SB_42349| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 5.3
SB_38994| Best HMM Match : Integrin_beta (HMM E-Value=0) 28 5.3
SB_50323| Best HMM Match : 7tm_1 (HMM E-Value=1.1e-34) 27 6.9
SB_8917| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 6.9
SB_50322| Best HMM Match : 7tm_1 (HMM E-Value=3.4e-33) 27 9.2
SB_54421| Best HMM Match : HipA_C (HMM E-Value=7.5) 27 9.2
SB_43935| Best HMM Match : 7tm_1 (HMM E-Value=0) 27 9.2
>SB_20899| Best HMM Match : RRM_1 (HMM E-Value=2.3e-15)
Length = 876
Score = 60.1 bits (139), Expect = 1e-09
Identities = 27/72 (37%), Positives = 43/72 (59%), Gaps = 1/72 (1%)
Frame = +1
Query: 223 KIFIGNLS-DKTTEADLRPLFEKYGTVVECDIVRNYGFVHMENEQVGREAIQNLNGELVH 399
+IFIGNL+ DK DL +F ++G V+ C + N+GFV E E+ EA+ +G +++
Sbjct: 47 RIFIGNLATDKIARQDLEEIFSRHGKVLGCSLHANFGFVQFETEKGADEAVAKEHGRIIN 106
Query: 400 GQAIKIEAAKSR 435
G+ I + SR
Sbjct: 107 GKKIDVRIVNSR 118
>SB_41412| Best HMM Match : RRM_1 (HMM E-Value=2.9e-35)
Length = 1118
Score = 54.4 bits (125), Expect = 5e-08
Identities = 25/80 (31%), Positives = 48/80 (60%), Gaps = 2/80 (2%)
Frame = +1
Query: 223 KIFIGNLSDKTTEADLRPLFEKYGTVVECDIVRNYGFVHMENEQVGREAIQNLNGELVHG 402
++++G L TTE D+R F YG + + ++ NYGFV E+++ +A+ NG+ + G
Sbjct: 4 RVYLGRLPYGTTEDDVRRFFRSYGRLRDINLKNNYGFVEFEDDRDADDAVYECNGKEMLG 63
Query: 403 QAIKIEAAK--SRKAPSTPT 456
+ I +E ++ +R + S P+
Sbjct: 64 ERILVEHSRGGARSSSSRPS 83
>SB_51896| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 179
Score = 52.8 bits (121), Expect = 2e-07
Identities = 26/77 (33%), Positives = 42/77 (54%)
Frame = +1
Query: 202 MPGTGTFKIFIGNLSDKTTEADLRPLFEKYGTVVECDIVRNYGFVHMENEQVGREAIQNL 381
M GT ++F+G LS +T DL +F YG ++ CD+ YGF+ E+ + EA++
Sbjct: 1 MASRGT-QLFVGRLSKETKLRDLENVFYLYGKLLRCDLKTAYGFIEYEDPRDAEEAMRRE 59
Query: 382 NGELVHGQAIKIEAAKS 432
N + G I +E +S
Sbjct: 60 NNRKLFGSRIVVEYVRS 76
>SB_37500| Best HMM Match : RRM_1 (HMM E-Value=7.3e-38)
Length = 496
Score = 50.0 bits (114), Expect = 1e-06
Identities = 34/108 (31%), Positives = 54/108 (50%), Gaps = 11/108 (10%)
Frame = +1
Query: 223 KIFIGNLSDKTTEADLRPLFEKYGTVVECDIV------RNYGFVHMENEQVGREAIQNLN 384
KIFIG L+ TTE L+ F ++GT+V+C I+ R +GFV E+ E ++
Sbjct: 51 KIFIGGLNWNTTEEGLKDYFSQWGTIVDCVIMKRDGRSRGFGFVTYESSDSVNEVLKK-K 109
Query: 385 GELVHGQAIKIEAAKSRKAPSTP-----TTKIFVGNLTDKTRAPEVRE 513
++ + I+ + + R P T KIFVG L T +++E
Sbjct: 110 DHVLDDREIEPKRSVPRDESGAPEAMSKTRKIFVGGLASTTVEEDIKE 157
>SB_37749| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1103
Score = 49.6 bits (113), Expect = 2e-06
Identities = 34/107 (31%), Positives = 51/107 (47%), Gaps = 10/107 (9%)
Frame = +1
Query: 214 GTFKIFIGNLSDKTTEADLRPLFEKYGTVVECDIVRN--------YGFVHMENEQVGREA 369
G +++ NLS T ADL+ F +YG VV IV N +G V M + +
Sbjct: 347 GGKSLWVANLSSITRAADLKTRFSQYGKVVGAKIVTNSKAPGAQCFGLVTMTTSEEAAKC 406
Query: 370 IQNLNGELVHGQAIKIEAAKSRKAPST--PTTKIFVGNLTDKTRAPE 504
IQ+L+ +HG+AI ++ AK + T +K G DK + E
Sbjct: 407 IQHLHRTELHGRAITVDRAKGDRVSQTQGSASKKTPGKAADKKGSAE 453
>SB_46050| Best HMM Match : RRM_1 (HMM E-Value=1.7e-33)
Length = 392
Score = 48.8 bits (111), Expect = 3e-06
Identities = 22/79 (27%), Positives = 47/79 (59%), Gaps = 8/79 (10%)
Frame = +1
Query: 226 IFIGNLSDKTTEADLRPLFEKYGTVVECDIV--------RNYGFVHMENEQVGREAIQNL 381
+F+GN+ + +E L+ +F + G V+ +V + YGF ++++ A++NL
Sbjct: 27 VFVGNIPYEASEEQLKEIFSEVGPVISFRLVFDRETGKPKGYGFCEYKDQETALSAMRNL 86
Query: 382 NGELVHGQAIKIEAAKSRK 438
NG ++G+A+++++A S K
Sbjct: 87 NGYELNGRALRVDSAASEK 105
>SB_59562| Best HMM Match : RRM_1 (HMM E-Value=6.1e-23)
Length = 201
Score = 46.4 bits (105), Expect = 1e-05
Identities = 23/76 (30%), Positives = 43/76 (56%), Gaps = 3/76 (3%)
Frame = +1
Query: 217 TFKIFIGNLSDKTTEADLRPLFEKYGTVVECDIVRN---YGFVHMENEQVGREAIQNLNG 387
T K+++GNL ++L FEK+G + + + RN + FV E+ + EA++ L+G
Sbjct: 3 TTKLYVGNLGRNADSSELERAFEKFGRLSKVWVARNPPGFAFVEYEDYRDAEEAVRELDG 62
Query: 388 ELVHGQAIKIEAAKSR 435
V + I++E + +R
Sbjct: 63 ANVCDRTIRVEFSNNR 78
>SB_29861| Best HMM Match : RRM_1 (HMM E-Value=1.10002e-42)
Length = 1531
Score = 46.0 bits (104), Expect = 2e-05
Identities = 31/111 (27%), Positives = 50/111 (45%), Gaps = 5/111 (4%)
Frame = +1
Query: 190 SESKMPGTGTFKIFIGNLSDKTTEADLRPLFEKYGTVVECDIVRN-----YGFVHMENEQ 354
SE + T +F+GN+ TT DL+ FE+YG V++ DI + Y FV
Sbjct: 239 SEDEFDPGCTRTLFVGNIEKTTTYGDLKEAFERYGEVIDVDIKKQPGNNPYAFVQFAELS 298
Query: 355 VGREAIQNLNGELVHGQAIKIEAAKSRKAPSTPTTKIFVGNLTDKTRAPEV 507
+A + ++ E V +K+ K P I+VG +T+ +V
Sbjct: 299 SAIQARRKMDREYVGRNRVKVGFGK-----VNPINTIWVGGVTNSLSEQQV 344
>SB_52333| Best HMM Match : RRM_1 (HMM E-Value=2.3e-16)
Length = 76
Score = 45.6 bits (103), Expect = 2e-05
Identities = 19/67 (28%), Positives = 37/67 (55%)
Frame = +1
Query: 226 IFIGNLSDKTTEADLRPLFEKYGTVVECDIVRNYGFVHMENEQVGREAIQNLNGELVHGQ 405
I++ N+ +E L+ +F KYG + + +R+YGFV+ + +AI +NG + G
Sbjct: 4 IYVRNVPLPMSETQLKAVFTKYGQIEKVRKIRDYGFVYFAKRESAVQAIDGINGAYIDGC 63
Query: 406 AIKIEAA 426
+++ A
Sbjct: 64 KLEVSLA 70
>SB_17244| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 299
Score = 45.6 bits (103), Expect = 2e-05
Identities = 35/112 (31%), Positives = 56/112 (50%), Gaps = 15/112 (13%)
Frame = +1
Query: 223 KIFIGNLSDKTTEADLRPLFEKYG----TVVECDIV----RNYGFVHMENEQVGREAIQN 378
K+F+G L+ +TT LR FE YG VV CD R +G+V + +V R +++
Sbjct: 15 KLFVGGLNRETTNETLREYFEAYGELTDVVVICDSATKKSRGFGYVTFADYKVTRNVLKD 74
Query: 379 L--NG-ELVHGQAIKIEAAKSRKAPST----PTTKIFVGNLTDKTRAPEVRE 513
NG + G+ ++++ A R S T KIFVG L + +++E
Sbjct: 75 KVENGAHRIDGKEVEVKRAIPRDDNSATSHEKTKKIFVGGLPEDATKEDIQE 126
>SB_37198| Best HMM Match : RRM_1 (HMM E-Value=7.8e-23)
Length = 362
Score = 45.2 bits (102), Expect = 3e-05
Identities = 24/87 (27%), Positives = 47/87 (54%), Gaps = 8/87 (9%)
Frame = +1
Query: 205 PGTGTFKIFIGNLSDKTTEADLRPLFEKYGTVV--------ECDIVRNYGFVHMENEQVG 360
PG +FI +L + T+ADL F+ +GTV+ + ++ + +GFV +N
Sbjct: 272 PGPDGSNLFIYHLPQEFTDADLMQTFQPFGTVISAKVFIDKQTNMSKCFGFVSYDNVMSA 331
Query: 361 REAIQNLNGELVHGQAIKIEAAKSRKA 441
+ AIQ++NG + + +K++ + + A
Sbjct: 332 QNAIQHMNGFQIGAKRLKVQLKRPKDA 358
>SB_971| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 783
Score = 44.8 bits (101), Expect = 4e-05
Identities = 33/104 (31%), Positives = 51/104 (49%), Gaps = 7/104 (6%)
Frame = +1
Query: 217 TFKIFIGNLSDKTTEADLRPLFEKYGTVVECDIVR-------NYGFVHMENEQVGREAIQ 375
T +F+GNL + DLR FEK+G V++ DI R Y FV + V +A
Sbjct: 236 TRTLFVGNLETGISCQDLRLSFEKFGVVLDVDIKRPARGQGNTYAFVKFADLDVAAKAKC 295
Query: 376 NLNGELVHGQAIKIEAAKSRKAPSTPTTKIFVGNLTDKTRAPEV 507
+ G+ + IKI +S++ TT+++VG L PE+
Sbjct: 296 AMQGQCIGRNHIKIGYGRSQQ-----TTRLWVGGLGPWISIPEL 334
>SB_44114| Best HMM Match : RRM_1 (HMM E-Value=9.9e-35)
Length = 929
Score = 44.4 bits (100), Expect = 6e-05
Identities = 17/61 (27%), Positives = 35/61 (57%)
Frame = +1
Query: 259 EADLRPLFEKYGTVVECDIVRNYGFVHMENEQVGREAIQNLNGELVHGQAIKIEAAKSRK 438
E+D+ YG + + + R YGFV ++ + +A+ +LNG + G+ + +E +K R+
Sbjct: 702 ESDVEKFLRGYGKIRDISLKRGYGFVEFDDHRDAEDAVHDLNGRDLIGERVVVEFSKGRR 761
Query: 439 A 441
+
Sbjct: 762 S 762
Score = 36.3 bits (80), Expect = 0.015
Identities = 21/74 (28%), Positives = 36/74 (48%), Gaps = 3/74 (4%)
Frame = +1
Query: 205 PGTGTFKIFIGNLSDKTTEADLRPLFEKYGTVVECDIVR---NYGFVHMENEQVGREAIQ 375
P + + + NLS +T+ DL+ F KYG V D + G V E++ AI+
Sbjct: 793 PVRTNYSVIVENLSSRTSWQDLKDYFRKYGKVTYADAHKKRIGEGVVEFESKDDLNTAIE 852
Query: 376 NLNGELVHGQAIKI 417
L+ + G+ I++
Sbjct: 853 KLDDTELGGRRIRV 866
>SB_23532| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 364
Score = 44.4 bits (100), Expect = 6e-05
Identities = 26/80 (32%), Positives = 45/80 (56%), Gaps = 8/80 (10%)
Frame = +1
Query: 223 KIFIGNLSDKTTEADLRPLFEKYGTVVECDIV--------RNYGFVHMENEQVGREAIQN 378
K +IGNL K EADL+ F +Y VV+ ++ R + FV +++ +AI
Sbjct: 231 KCYIGNLDFKVNEADLQDRFSRY-DVVDVQVISDRETQRPRGFAFVTFGSKKNMEDAINE 289
Query: 379 LNGELVHGQAIKIEAAKSRK 438
L+G+ G+++K+ A+SR+
Sbjct: 290 LDGQEFDGRSMKVNQARSRE 309
Score = 27.9 bits (59), Expect = 5.3
Identities = 13/39 (33%), Positives = 22/39 (56%)
Frame = +1
Query: 319 RNYGFVHMENEQVGREAIQNLNGELVHGQAIKIEAAKSR 435
R +GFV +E +AI +GE + G+ +K+ A+ R
Sbjct: 50 RGFGFVTFGSEDEMDKAIDKFDGEDLDGRPMKVNKAQPR 88
>SB_31414| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 610
Score = 44.0 bits (99), Expect = 7e-05
Identities = 22/73 (30%), Positives = 40/73 (54%)
Frame = +1
Query: 226 IFIGNLSDKTTEADLRPLFEKYGTVVECDIVRNYGFVHMENEQVGREAIQNLNGELVHGQ 405
+++ NLS TE L+ + +YG V +++Y FVH +AI+ +G+ + G
Sbjct: 331 VYLRNLSPSITEEKLKEEYSQYGAVDRVKKLKDYAFVHFTERDHALKAIEETDGKEMDG- 389
Query: 406 AIKIEAAKSRKAP 444
+KIEA+ ++ P
Sbjct: 390 -LKIEASLAKPQP 401
Score = 33.9 bits (74), Expect = 0.080
Identities = 31/106 (29%), Positives = 49/106 (46%), Gaps = 16/106 (15%)
Frame = +1
Query: 193 ESKMPGTGTFKI----FIGNLSDKTTEADLRPLFEKYGTVVE--------CDIVRNYGFV 336
E K PGTG+ K+ FIG + E +L P+FE+ G + + + + + F
Sbjct: 139 EGKPPGTGSEKVCSQVFIGKVPRDCFEDELIPVFEECGHIYDFRLMIDPISGLTKGFAFC 198
Query: 337 HMENEQVGREAIQNL-NGELVHGQ--AIKIEAAKSRK-APSTPTTK 462
N+ + A++ L N E+ G+ + I A SR S P TK
Sbjct: 199 TFSNKDEAQNAVKKLDNKEIRPGKRLGVCISVANSRLFVGSIPKTK 244
>SB_11682| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 184
Score = 43.6 bits (98), Expect = 1e-04
Identities = 19/72 (26%), Positives = 41/72 (56%), Gaps = 3/72 (4%)
Frame = +1
Query: 223 KIFIGNLSDKTTEADLRPLFEKYGTVVECDIVRN---YGFVHMENEQVGREAIQNLNGEL 393
K++IG+L D ++ ++ F YG + + + RN + F ++ + +A++ L+G
Sbjct: 33 KVYIGSLGDNASKREIENEFGYYGPLKDVWVARNPPGFAFCIFDDRRDAEDAVRELDGRY 92
Query: 394 VHGQAIKIEAAK 429
+ GQ +++E AK
Sbjct: 93 ICGQRVRVELAK 104
>SB_45423| Best HMM Match : RRM_1 (HMM E-Value=0)
Length = 514
Score = 43.2 bits (97), Expect = 1e-04
Identities = 22/82 (26%), Positives = 42/82 (51%), Gaps = 8/82 (9%)
Frame = +1
Query: 214 GTFKIFIGNLSDKTTEADLRPLFEKYGTVVECDIV--------RNYGFVHMENEQVGREA 369
G ++++G+L TEA ++ +FE +GTV ++ + YGFV + + A
Sbjct: 240 GPTRLYVGSLHFNITEAMVKAVFEPFGTVDSVQLIYDSETNRSKGYGFVQFREAEAAKRA 299
Query: 370 IQNLNGELVHGQAIKIEAAKSR 435
++ +NG + G+ +KI R
Sbjct: 300 MEQMNGFELAGRPLKIGPVTER 321
>SB_2700| Best HMM Match : RRM_1 (HMM E-Value=0)
Length = 593
Score = 42.3 bits (95), Expect = 2e-04
Identities = 22/76 (28%), Positives = 41/76 (53%), Gaps = 8/76 (10%)
Frame = +1
Query: 223 KIFIGNLSDKTTEADLRPLFEKYGTVVECDIVRN--------YGFVHMENEQVGREAIQN 378
+I+I ++ E D++ +FE +G VV C + + YGF+ EN+Q +AI +
Sbjct: 200 RIYIASVHPDLLEDDIKSVFEAFGKVVHCSLSKEPMTGKHKGYGFIEYENQQSANDAIAS 259
Query: 379 LNGELVHGQAIKIEAA 426
+N + GQ +++ A
Sbjct: 260 MNLFDLGGQFLRVGRA 275
Score = 32.7 bits (71), Expect = 0.18
Identities = 15/73 (20%), Positives = 39/73 (53%), Gaps = 8/73 (10%)
Frame = +1
Query: 223 KIFIGNLSDKTTEADLRPLFEKYGTVVECDIV--------RNYGFVHMENEQVGREAIQN 378
++++G+++ + E +R F +G + + D+ + + FV + + + A++
Sbjct: 103 RVYVGSINFELREEHIRTAFHPFGPINKIDLSWDPLNMKHKGFAFVEYDLPEAAQLALEQ 162
Query: 379 LNGELVHGQAIKI 417
+NG L+ G+ IK+
Sbjct: 163 MNGVLLGGRNIKV 175
>SB_38796| Best HMM Match : RRM_1 (HMM E-Value=0)
Length = 382
Score = 41.5 bits (93), Expect = 4e-04
Identities = 27/93 (29%), Positives = 46/93 (49%), Gaps = 8/93 (8%)
Frame = +1
Query: 226 IFIGNLSDKTTEADLRPLFEKYGTVVECDIVRN--------YGFVHMENEQVGREAIQNL 381
I++G L +K +EA + LF + G VV + ++ YGFV E+ AI+ +
Sbjct: 15 IYVGGLDEKVSEALIWELFLQSGPVVNVHMPKDRITQLHQGYGFVEFLGEEDADYAIKVM 74
Query: 382 NGELVHGQAIKIEAAKSRKAPSTPTTKIFVGNL 480
N V+G+ I++ A + +F+GNL
Sbjct: 75 NMIKVYGKPIRVNKASAHNKNLDVGANLFIGNL 107
Score = 27.1 bits (57), Expect = 9.2
Identities = 16/81 (19%), Positives = 37/81 (45%), Gaps = 9/81 (11%)
Frame = +1
Query: 226 IFIGNLSDKTTEADLRPLFEKYGTVVECDIV---------RNYGFVHMENEQVGREAIQN 378
+FIGNL + E L F +G +++ + + + F++ + AI+
Sbjct: 102 LFIGNLDTEVDEKLLYDTFSAFGVILQTPKIMRDSDTGNSKGFAFINFASFDASDAAIEA 161
Query: 379 LNGELVHGQAIKIEAAKSRKA 441
+NG+ + + I + A +++
Sbjct: 162 MNGQYLCNRPITVSYAFKKES 182
>SB_40573| Best HMM Match : RRM_1 (HMM E-Value=1.8e-39)
Length = 507
Score = 41.5 bits (93), Expect = 4e-04
Identities = 20/72 (27%), Positives = 36/72 (50%), Gaps = 6/72 (8%)
Frame = +1
Query: 223 KIFIGNLSDKTTEADLRPLFEKYGTVVECDIVRNYG------FVHMENEQVGREAIQNLN 384
++++GNL E DL +F KYG + + D+ G FV E+ + +A++ +
Sbjct: 262 RVYVGNLPQDVREKDLHDIFYKYGHIADVDLKNRRGAGPPFAFVEFEDPRDAEDAVKGRD 321
Query: 385 GELVHGQAIKIE 420
G G I++E
Sbjct: 322 GHEFDGYRIRVE 333
>SB_33046| Best HMM Match : RRM_1 (HMM E-Value=3.6e-13)
Length = 1463
Score = 41.5 bits (93), Expect = 4e-04
Identities = 18/72 (25%), Positives = 41/72 (56%), Gaps = 2/72 (2%)
Frame = +1
Query: 226 IFIGNLSDKTTEADLRPLFEKYGTVVECDIV--RNYGFVHMENEQVGREAIQNLNGELVH 399
I++G+L+ T+ L+ +FE++GT+ D++ R ++ ME + A+ L ++
Sbjct: 543 IWVGHLAKIVTQDTLQGIFEEHGTITSIDLIPPRGCAYIQMEKREDAYRALDKLRNIKLY 602
Query: 400 GQAIKIEAAKSR 435
G ++K+ A ++
Sbjct: 603 GNSVKLAWAPAK 614
>SB_2543| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 215
Score = 41.5 bits (93), Expect = 4e-04
Identities = 25/82 (30%), Positives = 43/82 (52%), Gaps = 9/82 (10%)
Frame = +1
Query: 226 IFIGNLSDKTTEADLRPLFEKYGTVVECDIVRN--------YGFVHMENEQVGREAIQNL 381
+++GNL T +DL +FE+YG VV+ I+R+ F+ + Q + A+ +
Sbjct: 12 VYVGNLPYSLTNSDLHKVFERYGKVVKVTILRDKETRESRGVAFILFIDRQSAQNAVAAV 71
Query: 382 NGELVHGQAIKIEAAKSR-KAP 444
N + + G+ IK AK +AP
Sbjct: 72 NKKQMFGRTIKCTIAKDNGRAP 93
>SB_53534| Best HMM Match : RRM_1 (HMM E-Value=1e-18)
Length = 268
Score = 41.1 bits (92), Expect = 5e-04
Identities = 25/80 (31%), Positives = 44/80 (55%), Gaps = 7/80 (8%)
Frame = +1
Query: 223 KIFIGNLSDKTTEADLRPLFEKYGTVVECDIVRN-------YGFVHMENEQVGREAIQNL 381
+IF+ + +TTE++LR FE+YG V E IVR+ Y F+ E+++V + +++
Sbjct: 9 RIFVKGFNRETTESELRAFFEEYGVVKESKIVRDKHGVSKGYAFITFESQEVA-DGLRDN 67
Query: 382 NGELVHGQAIKIEAAKSRKA 441
G + + I A RK+
Sbjct: 68 KGLDFKDKVLSIGQAVRRKS 87
>SB_27480| Best HMM Match : RRM_1 (HMM E-Value=3.7e-18)
Length = 209
Score = 40.7 bits (91), Expect = 7e-04
Identities = 18/77 (23%), Positives = 42/77 (54%), Gaps = 8/77 (10%)
Frame = +1
Query: 226 IFIGNLSDKTTEADLRPLFEKYGTVVECDIVRN--------YGFVHMENEQVGREAIQNL 381
+F+ L+ TT+ DL +F ++GT++ C+++R+ Y F+ E ++ A +
Sbjct: 122 LFVCKLNPVTTDEDLEIIFSRFGTILSCEVIRDQKTGESLQYAFIEFEKDEDCERAYFKM 181
Query: 382 NGELVHGQAIKIEAAKS 432
+ L+ + I ++ ++S
Sbjct: 182 DNVLIDDRRIHVDFSQS 198
>SB_42891| Best HMM Match : DUF537 (HMM E-Value=1.2e-23)
Length = 2386
Score = 40.7 bits (91), Expect = 7e-04
Identities = 26/78 (33%), Positives = 41/78 (52%), Gaps = 7/78 (8%)
Frame = +1
Query: 217 TFKIFIGNLSDKTTEADLRPLFEKYGTVVECDIVRNY-------GFVHMENEQVGREAIQ 375
+F ++IG LS+ TE L LF K+G V + I+R+ GFVH + V A
Sbjct: 523 SFPVWIGGLSEDVTENVLLELFNKFGPVKDVVILRDESGKSRQSGFVHFWSSDVAEAANV 582
Query: 376 NLNGELVHGQAIKIEAAK 429
+NG + G+ ++ + AK
Sbjct: 583 GMNGCDILGKIVETKYAK 600
>SB_1873| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 389
Score = 40.7 bits (91), Expect = 7e-04
Identities = 23/62 (37%), Positives = 32/62 (51%), Gaps = 2/62 (3%)
Frame = +1
Query: 226 IFIGNLSDKTTEADLRPLFEKYGTV--VECDIVRNYGFVHMENEQVGREAIQNLNGELVH 399
IF+ L + T L LF YG + +E + + YGFV+M N + AI LNG H
Sbjct: 274 IFVYGLPQEATPLFLYKLFSPYGAITNIELKLDKGYGFVNMSNYEEACHAICCLNGTPQH 333
Query: 400 GQ 405
G+
Sbjct: 334 GK 335
Score = 37.9 bits (84), Expect = 0.005
Identities = 20/105 (19%), Positives = 46/105 (43%), Gaps = 8/105 (7%)
Frame = +1
Query: 226 IFIGNLSDKTTEADLRPLFEKYGTVVECDIVRN--------YGFVHMENEQVGREAIQNL 381
+ I + ++ D++ +F G V C ++R+ Y FV+ +N +A++ +
Sbjct: 29 LIINYVPPSMSQEDIKKIFGTVGNVTSCKLIRDRATGQSLGYAFVNYDNPDDANKAVREM 88
Query: 382 NGELVHGQAIKIEAAKSRKAPSTPTTKIFVGNLTDKTRAPEVREL 516
NG + + +K+ A+ + +++ L + EV L
Sbjct: 89 NGARLQNKTLKVSFARP-SSTEIKNANLYISGLPKDMKEEEVEAL 132
>SB_41429| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 732
Score = 39.5 bits (88), Expect = 0.002
Identities = 24/84 (28%), Positives = 41/84 (48%), Gaps = 6/84 (7%)
Frame = +1
Query: 202 MPGTGTFKIFIGNLSDKTTEADLRPLFEKYGTVVECDIV------RNYGFVHMENEQVGR 363
+P +F+GNLS E L FE+ G C ++ R +G+ +++
Sbjct: 174 VPAKEEMSVFLGNLSFDADEETLAAFFEEKGLSATCRVITQEGRSRGFGYADFTSKEDYN 233
Query: 364 EAIQNLNGELVHGQAIKIEAAKSR 435
+A++ LNGE G+ I+I A S+
Sbjct: 234 KALE-LNGEDCCGREIRINPANSK 256
>SB_8450| Best HMM Match : RRM_1 (HMM E-Value=1.7e-36)
Length = 328
Score = 39.5 bits (88), Expect = 0.002
Identities = 31/97 (31%), Positives = 44/97 (45%)
Frame = +1
Query: 223 KIFIGNLSDKTTEADLRPLFEKYGTVVECDIVRNYGFVHMENEQVGREAIQNLNGELVHG 402
K+F+G LS +TT+ L+ F KYG +V DI + + G +Q +
Sbjct: 30 KLFVGGLSYETTKESLKEYFSKYGELVGVDIKMD----ALTGRPRGFAFVQFKHQSEADA 85
Query: 403 QAIKIEAAKSRKAPSTPTTKIFVGNLTDKTRAPEVRE 513
K AA K P KIFVG L +T ++RE
Sbjct: 86 IDPK-PAAPIGKPPHLRVKKIFVGGLKPETSDEKIRE 121
>SB_23537| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 371
Score = 39.5 bits (88), Expect = 0.002
Identities = 30/97 (30%), Positives = 48/97 (49%), Gaps = 16/97 (16%)
Frame = +1
Query: 193 ESKMPGTGTFKIFIGNLSDKTTEADLRPLFEKYG-TVVECDIV---------------RN 324
+ KM K++ GNL K T+ +L+ +FE TV + IV R
Sbjct: 41 DQKMVFADPNKVYAGNLPFKLTQDELKAVFEAESLTVTDVLIVKEPRNEFYQQQEPRSRG 100
Query: 325 YGFVHMENEQVGREAIQNLNGELVHGQAIKIEAAKSR 435
+GFV N + + A+++LNG+ V G+ +KI + SR
Sbjct: 101 FGFVTFANPEDAQTAVKSLNGKEVQGRTLKIAPSISR 137
>SB_7937| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 618
Score = 39.1 bits (87), Expect = 0.002
Identities = 21/74 (28%), Positives = 39/74 (52%), Gaps = 2/74 (2%)
Frame = +1
Query: 211 TGTFKIFIGNLSDKTTEADLRPLFEKYGTVVECDI--VRNYGFVHMENEQVGREAIQNLN 384
TG ++F+GNL D E +++ +F+KYG V E I + +GF+ ++ A L+
Sbjct: 50 TGRCRLFVGNLID-CDEEEMKEMFKKYGEVAEVFINKEKGFGFIRLDTRLHAEAAKAGLD 108
Query: 385 GELVHGQAIKIEAA 426
G+ +++ A
Sbjct: 109 MATRKGRTLRVRFA 122
>SB_28070| Best HMM Match : RRM_1 (HMM E-Value=1.3e-07)
Length = 694
Score = 38.3 bits (85), Expect = 0.004
Identities = 26/78 (33%), Positives = 43/78 (55%)
Frame = +1
Query: 241 LSDKTTEADLRPLFEKYGTVVECDIVRNYGFVHMENEQVGREAIQNLNGELVHGQAIKIE 420
LS TTE DLRP+FEKYG V IV ++ +A + G + G+ I+++
Sbjct: 188 LSLYTTERDLRPVFEKYGPVEAIQIVYDH------------QAKERTTGIELDGRRIRVD 235
Query: 421 AAKSRKAPSTPTTKIFVG 474
+ +++A TPT +++G
Sbjct: 236 YSVTKRA-HTPTPGVYMG 252
>SB_50249| Best HMM Match : RRM_1 (HMM E-Value=0)
Length = 420
Score = 37.1 bits (82), Expect = 0.009
Identities = 29/103 (28%), Positives = 49/103 (47%), Gaps = 7/103 (6%)
Frame = +1
Query: 226 IFIGNLSDKTTEADLRPLFEKYGTVVECDIV-------RNYGFVHMENEQVGREAIQNLN 384
+F+G L+ T E L+ FE++G V I+ RNYGFV +++ +E ++
Sbjct: 82 VFVGGLASGTDEEGLKDYFEQFGEVESVRIMRTFLGYSRNYGFVLFKDDGPSKEVLK--K 139
Query: 385 GELVHGQAIKIEAAKSRKAPSTPTTKIFVGNLTDKTRAPEVRE 513
+++G+ ++ KSR I+VG L VRE
Sbjct: 140 SHVINGKT--VDVGKSRN-----FRVIYVGGLPSHFTEQTVRE 175
Score = 28.3 bits (60), Expect = 4.0
Identities = 12/31 (38%), Positives = 18/31 (58%)
Frame = +1
Query: 226 IFIGNLSDKTTEADLRPLFEKYGTVVECDIV 318
+F+ NLS+ T E D+ F YG V + I+
Sbjct: 321 LFVDNLSEDTKELDVLRYFRPYGQVAKVHIL 351
Score = 27.1 bits (57), Expect = 9.2
Identities = 25/97 (25%), Positives = 41/97 (42%), Gaps = 1/97 (1%)
Frame = +1
Query: 226 IFIGNLSDKTTEADLRPLFEKYGTVVECDIVRNYGFVHMENEQVGREAIQNLNGELVHGQ 405
I++G L TE +R F+K+G + + N V + E Q + G V +
Sbjct: 159 IYVGGLPSHFTEQTVREHFKKFGVIEAVKFIENTS-VGAKTGXXXXEEDQEILGCPVTVR 217
Query: 406 AIK-IEAAKSRKAPSTPTTKIFVGNLTDKTRAPEVRE 513
A E+ + A + K+ V +L T E+RE
Sbjct: 218 ARSGKESNEDLMAKVIQSKKLMVQDLDFDTTVDELRE 254
>SB_57661| Best HMM Match : RRM_1 (HMM E-Value=0.017)
Length = 255
Score = 36.7 bits (81), Expect = 0.011
Identities = 16/50 (32%), Positives = 30/50 (60%), Gaps = 1/50 (2%)
Frame = +1
Query: 211 TGTFKIFIGNLSDKTTEADLRPLFEKYGTVVECDIVRN-YGFVHMENEQV 357
+ + K+F+G + E DLRP+FE YG + E I+++ Y H ++ ++
Sbjct: 167 SNSVKLFVGQVPRTWEEKDLRPIFEPYGQIYELTILKDKYTGQHKDDRKL 216
Score = 36.3 bits (80), Expect = 0.015
Identities = 14/34 (41%), Positives = 22/34 (64%)
Frame = +1
Query: 223 KIFIGNLSDKTTEADLRPLFEKYGTVVECDIVRN 324
K+F+G +S E DLR +F +GT+ E ++RN
Sbjct: 215 KLFVGMISKHAKEEDLRVMFSPFGTIEELTVLRN 248
>SB_34757| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 435
Score = 36.7 bits (81), Expect = 0.011
Identities = 22/114 (19%), Positives = 52/114 (45%), Gaps = 8/114 (7%)
Frame = +1
Query: 196 SKMPGTGTFKIFIGNLSDKTTEADLRPLFEKYGTVVECDI--------VRNYGFVHMENE 351
+K+ G + + L TTE++++ F ++G + C++ R +GFV + +
Sbjct: 107 TKVEGVDVGDLIVLGLPYATTESEMKEYFTRFGEIDFCEVKLDPNTRRSRGFGFVRFKKD 166
Query: 352 QVGREAIQNLNGELVHGQAIKIEAAKSRKAPSTPTTKIFVGNLTDKTRAPEVRE 513
+ + + + G+ ++ + ++ + P K+FVG L + T + E
Sbjct: 167 EDAKNVLS--TSHRIQGRLCEVRLPRPKEELNVP-KKLFVGRLPESTTEKTLME 217
Score = 32.3 bits (70), Expect = 0.24
Identities = 16/41 (39%), Positives = 24/41 (58%), Gaps = 3/41 (7%)
Frame = +1
Query: 223 KIFIGNLSDKTTEADLRPLFEKYGTVVECDI---VRNYGFV 336
K+F+G L + TTE L F ++G V + I R++GFV
Sbjct: 200 KLFVGRLPESTTEKTLMEYFAQFGEVTDVYIPKPFRHFGFV 240
>SB_33676| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 828
Score = 36.7 bits (81), Expect = 0.011
Identities = 23/90 (25%), Positives = 41/90 (45%), Gaps = 10/90 (11%)
Frame = +1
Query: 226 IFIGNLSDKTTEADLRPLFEKYGTVVECDIVRN--------YGFVHMENEQVGREAIQNL 381
+++ N+ + EA+ R FE YG +V C ++R+ GFV + + + AI +L
Sbjct: 135 LYVCNIPKQLPEAEFRKAFEAYGNIVNCRLLRDKSTGLPKGCGFVLYDKKAEAQAAISSL 194
Query: 382 NGELVHG--QAIKIEAAKSRKAPSTPTTKI 465
+G G ++I A A P +
Sbjct: 195 SGTFFPGSTMGLQIRYADDNSAKVRPPNNV 224
Score = 33.1 bits (72), Expect = 0.14
Identities = 23/104 (22%), Positives = 45/104 (43%), Gaps = 8/104 (7%)
Frame = +1
Query: 226 IFIGNLSDKTTEADLRPLFEKYGTVVECDIVRN--------YGFVHMENEQVGREAIQNL 381
+ + + T+ R +FE ++ C IVR+ +GFV + ++AI L
Sbjct: 49 LIVNYIPQDMTDQTFRMMFEAVASLNNCKIVRHKPSGWSYGFGFVDYNTTEDAQKAIDKL 108
Query: 382 NGELVHGQAIKIEAAKSRKAPSTPTTKIFVGNLTDKTRAPEVRE 513
NG + + +K+ A +T ++V N+ + E R+
Sbjct: 109 NGFTIGNKVLKV-AFSRPGGDNTKGANLYVCNIPKQLPEAEFRK 151
>SB_28089| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 254
Score = 36.3 bits (80), Expect = 0.015
Identities = 17/61 (27%), Positives = 29/61 (47%)
Frame = +1
Query: 223 KIFIGNLSDKTTEADLRPLFEKYGTVVECDIVRNYGFVHMENEQVGREAIQNLNGELVHG 402
+++ G L E DL YG V E + YGFV ++ + + + +LNG + G
Sbjct: 6 RVYFGRLPRDCRERDLEKFVRGYGRVREISMKLGYGFVEFDDYRDADDCVYDLNGRNLLG 65
Query: 403 Q 405
+
Sbjct: 66 E 66
>SB_46162| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 291
Score = 36.3 bits (80), Expect = 0.015
Identities = 23/76 (30%), Positives = 42/76 (55%), Gaps = 8/76 (10%)
Frame = +1
Query: 223 KIFIGNLSDKTTEADLRPLFEKYGTVVECDIVRN--------YGFVHMENEQVGREAIQN 378
K++IGNL+ + E ++ FE++G V + DI+R+ +GFV +++ AI+
Sbjct: 10 KLYIGNLNFNSDEGEIEQAFEEFG-VEKVDILRDKESGRSRGFGFVLLQSADQIAPAIEK 68
Query: 379 LNGELVHGQAIKIEAA 426
+N V G+ I + A
Sbjct: 69 MNQSSVGGRNITVALA 84
>SB_41866| Best HMM Match : RRM_1 (HMM E-Value=0)
Length = 718
Score = 35.5 bits (78), Expect = 0.026
Identities = 18/78 (23%), Positives = 39/78 (50%), Gaps = 7/78 (8%)
Frame = +1
Query: 226 IFIGNLSDKTTEADLRPLFEKYGTVVECDIVRN-------YGFVHMENEQVGREAIQNLN 384
++I NL D + LR F YGT+ ++++ +GFV + + +A+ +N
Sbjct: 214 LYIKNLDDPIDDERLREEFSPYGTISSAKVMKDDKGNSKGFGFVCFSSPEEATKAVTEMN 273
Query: 385 GELVHGQAIKIEAAKSRK 438
G ++ + + + A+ R+
Sbjct: 274 GRILISKPLYVALAQRRE 291
Score = 33.1 bits (72), Expect = 0.14
Identities = 17/77 (22%), Positives = 36/77 (46%), Gaps = 7/77 (9%)
Frame = +1
Query: 226 IFIGNLSDKTTEADLRPLFEKYGTVVECDIV-------RNYGFVHMENEQVGREAIQNLN 384
+++ N D + ++ + + G +V ++ + +GFV E + EA+ LN
Sbjct: 111 VYVKNFGDDMDDEQMKEICAEAGKIVSLKVMTDPEGKSKGFGFVSFETPEEAEEAVNVLN 170
Query: 385 GELVHGQAIKIEAAKSR 435
G+ + G+ + AK R
Sbjct: 171 GKEIGGRRLWAGRAKKR 187
Score = 29.5 bits (63), Expect = 1.7
Identities = 23/81 (28%), Positives = 44/81 (54%), Gaps = 10/81 (12%)
Frame = +1
Query: 226 IFIGNLSDKTTEADLRPLFEKYGTVVE---C-DIV--RNYGFVHMENEQVGR----EAIQ 375
+++G+L+ TEA L F G+V+ C D+V R+ G+ ++ +Q G EAI
Sbjct: 15 LYVGDLAPDVTEAMLYEKFSTAGSVLSIRVCRDLVTRRSLGYAYVNFQQPGHDAALEAIA 74
Query: 376 NLNGELVHGQAIKIEAAKSRK 438
++G L++ + + + S+K
Sbjct: 75 RVDGMLLNDKKVFVGRWMSKK 95
>SB_48466| Best HMM Match : Pro_isomerase (HMM E-Value=0)
Length = 298
Score = 35.1 bits (77), Expect = 0.035
Identities = 21/78 (26%), Positives = 36/78 (46%), Gaps = 8/78 (10%)
Frame = +1
Query: 229 FIGNLSDKTTEADLRPLFEKYGTVVECDIV--------RNYGFVHMENEQVGREAIQNLN 384
++G L+++ E L F +G + + I R +GFV E + AI N+N
Sbjct: 8 YVGGLAEEVDEKVLHAAFIPFGDITDVQIPMDYTTSKHRGFGFVEFEFAEDTAAAIDNMN 67
Query: 385 GELVHGQAIKIEAAKSRK 438
+ G+ I++ AK K
Sbjct: 68 ESELFGRTIRVNLAKPMK 85
>SB_27005| Best HMM Match : NTF2 (HMM E-Value=1.1e-33)
Length = 662
Score = 35.1 bits (77), Expect = 0.035
Identities = 13/28 (46%), Positives = 20/28 (71%)
Frame = +1
Query: 223 KIFIGNLSDKTTEADLRPLFEKYGTVVE 306
++FIGNL +AD+ +F KYGT++E
Sbjct: 358 QVFIGNLPSGVKDADVNEVFSKYGTILE 385
>SB_8823| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1309
Score = 35.1 bits (77), Expect = 0.035
Identities = 25/97 (25%), Positives = 43/97 (44%), Gaps = 10/97 (10%)
Frame = +1
Query: 226 IFIGNLSDKTTEADLRPLFEKYGTVVECDIVRN------YGFVHMENEQVGREAIQNLNG 387
+++GNL K T+ + +F K VV C ++ + Y FV E +EA ++
Sbjct: 371 LYVGNLDPKCTQELICSIFNKIAKVVRCKMINSPTDKGPYCFVEFETHADAQEAKFRMDQ 430
Query: 388 ELVHGQAIKIEAAKSRKAPSTPTTK----IFVGNLTD 486
V + +K+ A + T IFVG+L +
Sbjct: 431 RTVMDKKLKVNWATNHPGMKRGDTNNHFHIFVGDLAE 467
Score = 32.3 bits (70), Expect = 0.24
Identities = 11/45 (24%), Positives = 27/45 (60%), Gaps = 2/45 (4%)
Frame = +1
Query: 226 IFIGNLSDKTTEADLRPLFEKYGTVVECDIV--RNYGFVHMENEQ 354
+++GNL + +L+ +F +YG+++E + + Y F++ E+
Sbjct: 617 VYVGNLPPDVKDYELQQMFSQYGSILETKVFADKGYAFINARGEK 661
>SB_17242| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 314
Score = 34.7 bits (76), Expect = 0.046
Identities = 26/113 (23%), Positives = 49/113 (43%), Gaps = 17/113 (15%)
Frame = +1
Query: 223 KIFIGNLSDKTTEADLRPLFEKYGTVVECDI------------VRNYGFVHMEN-EQVGR 363
K+F+G L++ TTE +R F+ + E D+ R + FV N +
Sbjct: 9 KLFVGGLNEDTTEETVRAYFKSFCEGSEADVSSVSLAKTPEGKSRKFCFVEFSNGSDIID 68
Query: 364 EAIQNLNGELVHGQAIKIEAAKSRKAPS----TPTTKIFVGNLTDKTRAPEVR 510
+ N + + ++++ A R P+ T K+F+G L D+ +V+
Sbjct: 69 NIVFNFESHSIDNKQVEVKRAMPRDDPNELAHVRTKKLFIGGLKDEHSEEDVK 121
>SB_24938| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 550
Score = 34.3 bits (75), Expect = 0.060
Identities = 22/79 (27%), Positives = 38/79 (48%), Gaps = 3/79 (3%)
Frame = +1
Query: 226 IFIGNLSDKTTEADLRPLFEKYGTVVECDIV--RNYGFVHMENEQVGREAI-QNLNGELV 396
+++G L K TE DLR F ++G + +V +N FV + A ++ N ++
Sbjct: 306 LYVGGLEGKVTEQDLRDHFYQFGELRSISMVPRQNCAFVCFTSRAAAEAAADRSFNKLIL 365
Query: 397 HGQAIKIEAAKSRKAPSTP 453
G+ +KI KS+ P
Sbjct: 366 KGRRLKIMWGKSQGQQPAP 384
>SB_11106| Best HMM Match : RRM_1 (HMM E-Value=1.8e-11)
Length = 67
Score = 33.9 bits (74), Expect = 0.080
Identities = 17/63 (26%), Positives = 31/63 (49%), Gaps = 2/63 (3%)
Frame = +1
Query: 223 KIFIGNLSDKTTEADLRPLFEKYGT--VVECDIVRNYGFVHMENEQVGREAIQNLNGELV 396
++++G L T E D++ F YG + E + YGFV + +A+ NG+ +
Sbjct: 4 RVYLGRLPYGTREDDVKKFFYTYGRFKIREIILKDGYGFVEFDYSDDAEDAVYECNGKKM 63
Query: 397 HGQ 405
G+
Sbjct: 64 LGE 66
>SB_28139| Best HMM Match : RRM_1 (HMM E-Value=3.7e-28)
Length = 419
Score = 33.5 bits (73), Expect = 0.11
Identities = 24/84 (28%), Positives = 40/84 (47%), Gaps = 13/84 (15%)
Frame = +1
Query: 202 MPGTGTFKI-----FIGNLSDKTTEADLRPLFEKYGTVV--------ECDIVRNYGFVHM 342
+P TG K+ +I L TT+ DL L KYGT++ + ++ + YGFV
Sbjct: 89 LPDTGEEKLSKTNLYIRGLKANTTDDDLVRLCHKYGTIISTKAILDKDTNLCKGYGFVDF 148
Query: 343 ENEQVGREAIQNLNGELVHGQAIK 414
E+ ++A+ L + + Q K
Sbjct: 149 ESPISAQKAVAALVNKGIQAQMAK 172
>SB_37378| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 781
Score = 33.1 bits (72), Expect = 0.14
Identities = 16/53 (30%), Positives = 31/53 (58%), Gaps = 2/53 (3%)
Frame = +1
Query: 268 LRPLFEKYGTVVECDIV--RNYGFVHMENEQVGREAIQNLNGELVHGQAIKIE 420
L+ +F ++G +++ ++ RN+G+ +Q AIQ L+G V G +KI+
Sbjct: 354 LKDVFSRFGNLIDVWMMKERNFGYAKFAAKQSADAAIQGLHGHDVLGMKLKID 406
>SB_51113| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 871
Score = 32.3 bits (70), Expect = 0.24
Identities = 21/80 (26%), Positives = 37/80 (46%), Gaps = 11/80 (13%)
Frame = +1
Query: 226 IFIGNLSDKTTEADLRPLFEKYGTVVECDIVRN--------YGFVH---MENEQVGREAI 372
+F+GNL + TE L YG + +VR+ YGFV EN ++ +
Sbjct: 115 LFVGNLPFEFTETQFGDLMSPYGNIERLFLVRSEVTGDSKGYGFVEYATRENAMQAKQQL 174
Query: 373 QNLNGELVHGQAIKIEAAKS 432
N + + G+ +++ A+S
Sbjct: 175 LNTASKYIGGRILRVAFAES 194
>SB_18756| Best HMM Match : Sterol_desat (HMM E-Value=0)
Length = 672
Score = 31.9 bits (69), Expect = 0.32
Identities = 19/63 (30%), Positives = 33/63 (52%), Gaps = 8/63 (12%)
Frame = +1
Query: 220 FKIFIGNLSDKTTEADLRPLFEKYGTVVECDIVRN--------YGFVHMENEQVGREAIQ 375
F+IF G+L + T+ L F KY + ++ IVR+ YGFV ++ +A++
Sbjct: 217 FRIFCGDLGSEVTDESLTRAFAKYTSFLKAKIVRDKKSNKSKGYGFVSFKDPNDFIKAMR 276
Query: 376 NLN 384
+N
Sbjct: 277 EMN 279
>SB_6474| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 375
Score = 31.9 bits (69), Expect = 0.32
Identities = 14/26 (53%), Positives = 17/26 (65%)
Frame = +1
Query: 223 KIFIGNLSDKTTEADLRPLFEKYGTV 300
K+FIG L+ TTE DL+ F YG V
Sbjct: 203 KVFIGGLAFGTTEEDLKEYFSTYGMV 228
>SB_53070| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 347
Score = 31.1 bits (67), Expect = 0.56
Identities = 13/37 (35%), Positives = 21/37 (56%)
Frame = +1
Query: 205 PGTGTFKIFIGNLSDKTTEADLRPLFEKYGTVVECDI 315
PG +FI +L + T+ADL F+ +GTV+ +
Sbjct: 224 PGPDGSNLFIYHLPQEFTDADLMQTFQPFGTVISAKV 260
Score = 30.7 bits (66), Expect = 0.74
Identities = 16/66 (24%), Positives = 33/66 (50%), Gaps = 8/66 (12%)
Frame = +1
Query: 268 LRPLFEKYGTVVECDIV--------RNYGFVHMENEQVGREAIQNLNGELVHGQAIKIEA 423
L F+ +GTV+ + + +GFV +N + AIQ++NG + + +K++
Sbjct: 278 LMQTFQPFGTVISAKVFIDKQTNMSKCFGFVSYDNVMSAQNAIQHMNGFQIGAKRLKVQL 337
Query: 424 AKSRKA 441
+ + A
Sbjct: 338 KRPKDA 343
>SB_3536| Best HMM Match : RRM_1 (HMM E-Value=0)
Length = 1026
Score = 29.9 bits (64), Expect = 1.3
Identities = 11/31 (35%), Positives = 21/31 (67%)
Frame = +1
Query: 226 IFIGNLSDKTTEADLRPLFEKYGTVVECDIV 318
+FI NLS +T+ ++ LF+++G + C +V
Sbjct: 418 VFIRNLSFDSTQKNITNLFKQFGDIAYCKVV 448
Score = 28.3 bits (60), Expect = 4.0
Identities = 25/95 (26%), Positives = 44/95 (46%), Gaps = 9/95 (9%)
Frame = +1
Query: 196 SKMPGTGTFKIFIGNLSDKTTEADLRPLFEKYGTVVECDIV---------RNYGFVHMEN 348
SK P IF+ NL T+A+ + FE+ G + IV R +G+V
Sbjct: 12 SKTPVISKTTIFVRNLPYNITDAEFKSAFEEIGPLKRGFIVKDKDNQNRCRGFGYVTFAL 71
Query: 349 EQVGREAIQNLNGELVHGQAIKIEAAKSRKAPSTP 453
E+ +A N+ + G+ I ++ ++ +KA + P
Sbjct: 72 EEDALKAKDNIKS--IKGRPIHLDFSE-KKARTKP 103
>SB_23536| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 414
Score = 29.5 bits (63), Expect = 1.7
Identities = 14/46 (30%), Positives = 28/46 (60%), Gaps = 5/46 (10%)
Frame = +1
Query: 319 RNYGFVHMENEQVGREAIQNLNGEL-----VHGQAIKIEAAKSRKA 441
RN+G+V +EQ +A++ + GE + G+A+ IE A+ +++
Sbjct: 17 RNFGYVTFRDEQDAADAMKQMGGESGKGKEIFGRALNIEYAQEKES 62
>SB_29577| Best HMM Match : RRM_1 (HMM E-Value=8.5e-15)
Length = 171
Score = 29.1 bits (62), Expect = 2.3
Identities = 16/71 (22%), Positives = 36/71 (50%), Gaps = 8/71 (11%)
Frame = +1
Query: 226 IFIGNLSDKTTEADLRPLFEKYGTVVECDIVRN--------YGFVHMENEQVGREAIQNL 381
I++G++ E +++ FE++GTV + R+ Y FV ++V + A +
Sbjct: 100 IYLGHIPHGFFENEIKKFFEQFGTVNRIRLSRSKKSARSKGYAFVEFACDEVAKIAADTM 159
Query: 382 NGELVHGQAIK 414
+ ++ G+ +K
Sbjct: 160 HNYMMFGRLLK 170
>SB_15287| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 218
Score = 29.1 bits (62), Expect = 2.3
Identities = 14/41 (34%), Positives = 25/41 (60%), Gaps = 1/41 (2%)
Frame = +1
Query: 10 IRGVY-LVFIFLTCVIYCYSLYIVTHVSIISNFIYPVYSLI 129
I VY LV +++TCV +YI + +++ +I VY+L+
Sbjct: 146 ITSVYTLVDMYVTCVYTLVDVYITSVYTLVDMYITSVYTLV 186
Score = 27.1 bits (57), Expect = 9.2
Identities = 11/35 (31%), Positives = 21/35 (60%)
Frame = +1
Query: 25 LVFIFLTCVIYCYSLYIVTHVSIISNFIYPVYSLI 129
LV +++TCV +YI +++ +I VY+L+
Sbjct: 53 LVDMYITCVYTLVDMYITCVYTLVDMYITCVYTLV 87
Score = 27.1 bits (57), Expect = 9.2
Identities = 11/35 (31%), Positives = 21/35 (60%)
Frame = +1
Query: 25 LVFIFLTCVIYCYSLYIVTHVSIISNFIYPVYSLI 129
LV +++TCV +YI +++ +I VY+L+
Sbjct: 64 LVDMYITCVYTLVDMYITCVYTLVDMYITCVYTLV 98
Score = 27.1 bits (57), Expect = 9.2
Identities = 11/35 (31%), Positives = 21/35 (60%)
Frame = +1
Query: 25 LVFIFLTCVIYCYSLYIVTHVSIISNFIYPVYSLI 129
LV +++TCV +YI +++ +I VY+L+
Sbjct: 75 LVDMYITCVYTLVDMYITCVYTLVDMYITCVYTLV 109
Score = 27.1 bits (57), Expect = 9.2
Identities = 10/35 (28%), Positives = 21/35 (60%)
Frame = +1
Query: 25 LVFIFLTCVIYCYSLYIVTHVSIISNFIYPVYSLI 129
LV +++TCV +Y+ +++ +I VY+L+
Sbjct: 119 LVDMYITCVYTLVDMYVTCVYTLVDVYITSVYTLV 153
>SB_57433| Best HMM Match : RRM_1 (HMM E-Value=4.5e-24)
Length = 407
Score = 28.7 bits (61), Expect = 3.0
Identities = 22/78 (28%), Positives = 37/78 (47%), Gaps = 8/78 (10%)
Frame = +1
Query: 226 IFIGNLSDKTTEADLRPLFEKYGTVVECDIVRN--------YGFVHMENEQVGREAIQNL 381
+FIGNL E LR LF G V ++R+ +G+V E++ A++
Sbjct: 58 VFIGNLPFDIEEEPLRELFTTCGNVESVRLIRDRKTGIGKGFGYVLFESKDAVVFALKMN 117
Query: 382 NGELVHGQAIKIEAAKSR 435
N E G+ I++ +K +
Sbjct: 118 NAEF-KGRKIRVFPSKDK 134
>SB_52510| Best HMM Match : RRM_1 (HMM E-Value=8.1e-21)
Length = 304
Score = 28.7 bits (61), Expect = 3.0
Identities = 20/79 (25%), Positives = 38/79 (48%), Gaps = 8/79 (10%)
Frame = +1
Query: 217 TFKIFIGNLSDKTTEADLRPLFEKYGTVVECDIVRN--------YGFVHMENEQVGREAI 372
T I + NLS++T E+DL+ LF G + + ++ + F++ + + AI
Sbjct: 180 TATIRVTNLSEETRESDLQELFRPLGPISRIFLAKDKFTNQSKGFAFINFVHREDAARAI 239
Query: 373 QNLNGELVHGQAIKIEAAK 429
+ L+G + +E AK
Sbjct: 240 EVLSGFGYDHLILNVEWAK 258
>SB_43406| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 576
Score = 28.7 bits (61), Expect = 3.0
Identities = 22/85 (25%), Positives = 39/85 (45%), Gaps = 2/85 (2%)
Frame = +1
Query: 199 KMPGTGTFKIFIGNLSDKTTEADLRPLFEKYGTVVECDIVRN--YGFVHMENEQVGREAI 372
K+ +G +F+ + TE L+ F G V + +N GFV + + +AI
Sbjct: 103 KLIASGGKTVFVSGIG--LTEEILKEEFNHLGHVERVNFEKNRSQGFVTFDTWEAADKAI 160
Query: 373 QNLNGELVHGQAIKIEAAKSRKAPS 447
+NG V Q + I + +R+ P+
Sbjct: 161 DEMNGLKV--QHVHIRVSMARRQPN 183
>SB_35697| Best HMM Match : RRM_1 (HMM E-Value=1.3e-19)
Length = 168
Score = 28.7 bits (61), Expect = 3.0
Identities = 18/73 (24%), Positives = 35/73 (47%), Gaps = 8/73 (10%)
Frame = +1
Query: 223 KIFIGNLSDKTTEADLRPLFEKYGTVVECDIV-------RNYGFVHMENEQVGREAIQNL 381
++F+G + E +L P+FE G + E ++ R Y FV ++ + ++ L
Sbjct: 75 EVFVGKIPRDLYEDELVPVFETAGPIYEVRLMMDFNGQNRGYAFVVYTSKDDAKRCVKTL 134
Query: 382 NG-ELVHGQAIKI 417
N E+ G+ I +
Sbjct: 135 NNYEIRKGKCIGV 147
>SB_43251| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 204
Score = 28.7 bits (61), Expect = 3.0
Identities = 13/37 (35%), Positives = 23/37 (62%)
Frame = +1
Query: 214 GTFKIFIGNLSDKTTEADLRPLFEKYGTVVECDIVRN 324
G + + NL+ +TT DL+ +F+KYG + + I R+
Sbjct: 14 GMTSLKVDNLTYRTTVEDLKQVFKKYGDLGDIYIPRD 50
>SB_19711| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 203
Score = 28.7 bits (61), Expect = 3.0
Identities = 13/33 (39%), Positives = 19/33 (57%)
Frame = +1
Query: 226 IFIGNLSDKTTEADLRPLFEKYGTVVECDIVRN 324
+ I NL E DL+ L + YG V+ C+I R+
Sbjct: 121 LIIQNLPKGIQEKDLKELLQLYGNVLVCNIERD 153
>SB_47831| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 138
Score = 28.3 bits (60), Expect = 4.0
Identities = 11/32 (34%), Positives = 18/32 (56%)
Frame = +1
Query: 223 KIFIGNLSDKTTEADLRPLFEKYGTVVECDIV 318
K+F+GN+ K +L+ F +G VV I+
Sbjct: 80 KVFVGNIGFKVRARELKDFFGYFGDVVYAQII 111
>SB_42349| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 980
Score = 27.9 bits (59), Expect = 5.3
Identities = 13/32 (40%), Positives = 18/32 (56%)
Frame = +3
Query: 3 VGNSWSLFGVHIFNLCYILLFFVHSNPCKYYF 98
V S S+ G HIF + +L+ F+ S P YF
Sbjct: 297 VDRSGSMSGKHIFQVKEMLILFLKSLPANCYF 328
>SB_38994| Best HMM Match : Integrin_beta (HMM E-Value=0)
Length = 467
Score = 27.9 bits (59), Expect = 5.3
Identities = 23/76 (30%), Positives = 37/76 (48%), Gaps = 7/76 (9%)
Frame = +1
Query: 187 VSESKMPGTGTFKIFIGNLSDKTTEADLR-PLFEKYGTVVECDIVRNYGFVH----MENE 351
++ES T FK+ G+ DKT +R L + EC V +YGF H + N+
Sbjct: 44 IAESMKNITKNFKLGFGSFVDKTVSPYVRTELTKPCSDTSEC--VASYGFKHILPLVRND 101
Query: 352 QVGREAI--QNLNGEL 393
+ +E + Q ++G L
Sbjct: 102 TMFKEKVNEQKISGNL 117
>SB_50323| Best HMM Match : 7tm_1 (HMM E-Value=1.1e-34)
Length = 411
Score = 27.5 bits (58), Expect = 6.9
Identities = 12/36 (33%), Positives = 21/36 (58%)
Frame = +1
Query: 52 IYCYSLYIVTHVSIISNFIYPVYSLIFSEKYHRFRR 159
+Y ++ T S+I+ FIY V + +F E+Y + R
Sbjct: 273 LYFLYFFLATLSSVINPFIYGVMNPMFREEYKKILR 308
>SB_8917| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 128
Score = 27.5 bits (58), Expect = 6.9
Identities = 12/41 (29%), Positives = 24/41 (58%), Gaps = 1/41 (2%)
Frame = +1
Query: 10 IRGVY-LVFIFLTCVIYCYSLYIVTHVSIISNFIYPVYSLI 129
I VY LV +++TCV +Y+ +++ ++ VY+L+
Sbjct: 56 ITSVYTLVDMYITCVYTLVDMYVTCVYTLVDMYVTCVYTLV 96
>SB_50322| Best HMM Match : 7tm_1 (HMM E-Value=3.4e-33)
Length = 418
Score = 27.1 bits (57), Expect = 9.2
Identities = 12/36 (33%), Positives = 21/36 (58%)
Frame = +1
Query: 52 IYCYSLYIVTHVSIISNFIYPVYSLIFSEKYHRFRR 159
+Y ++ T S+I+ FIY V + +F E+Y + R
Sbjct: 275 LYLLYSFLATLSSVINPFIYGVMNPMFREEYKKILR 310
>SB_54421| Best HMM Match : HipA_C (HMM E-Value=7.5)
Length = 248
Score = 27.1 bits (57), Expect = 9.2
Identities = 17/43 (39%), Positives = 21/43 (48%)
Frame = +3
Query: 93 YFKFHLSRVLVNILGKIPSLQTLLTHFVKCMRFRI*NAGHRYF 221
++KFH S I K+P L T T + R RI N GH F
Sbjct: 192 FYKFHNSL----IYAKLPDLVTRSTRSTRGYRARIRNHGHSCF 230
>SB_43935| Best HMM Match : 7tm_1 (HMM E-Value=0)
Length = 842
Score = 27.1 bits (57), Expect = 9.2
Identities = 12/36 (33%), Positives = 21/36 (58%)
Frame = +1
Query: 52 IYCYSLYIVTHVSIISNFIYPVYSLIFSEKYHRFRR 159
+Y ++ T S+I+ FIY V + +F E+Y + R
Sbjct: 705 LYLLYSFLATLSSVINPFIYGVMNPMFREEYKKILR 740
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,465,049
Number of Sequences: 59808
Number of extensions: 304883
Number of successful extensions: 878
Number of sequences better than 10.0: 68
Number of HSP's better than 10.0 without gapping: 741
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 869
length of database: 16,821,457
effective HSP length: 77
effective length of database: 12,216,241
effective search space used: 1148326654
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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