Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= epV30546
(516 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z78019-5|CAB01455.1| 305|Caenorhabditis elegans Hypothetical pr... 63 1e-10
U21302-2|AAA92287.1| 305|Caenorhabditis elegans RNP-1 protein. 63 1e-10
Z78536-3|CAB01717.2| 360|Caenorhabditis elegans Hypothetical pr... 58 3e-09
U23172-15|AAN63408.1| 374|Caenorhabditis elegans Hypothetical p... 52 2e-07
U23172-12|ABH03526.1| 562|Caenorhabditis elegans Hypothetical p... 52 2e-07
U41531-7|AAA83161.2| 415|Caenorhabditis elegans Feminizing gene... 51 4e-07
U14946-1|AAA67723.1| 415|Caenorhabditis elegans ribonucleoprote... 51 4e-07
Z66521-4|CAD59160.1| 150|Caenorhabditis elegans Hypothetical pr... 50 1e-06
Z66521-3|CAD59159.1| 148|Caenorhabditis elegans Hypothetical pr... 50 1e-06
Z66521-2|CAA91395.1| 312|Caenorhabditis elegans Hypothetical pr... 50 1e-06
U80455-1|AAB37881.1| 584|Caenorhabditis elegans Elav-type rna b... 48 3e-06
U53931-1|AAA98566.1| 584|Caenorhabditis elegans elav-type ribon... 48 3e-06
EF523770-1|ABS18836.1| 513|Caenorhabditis elegans ELAV-type RNA... 48 3e-06
EF523769-1|ABS18835.1| 327|Caenorhabditis elegans ELAV-type RNA... 48 3e-06
EF523768-1|ABS18834.1| 378|Caenorhabditis elegans ELAV-type RNA... 48 3e-06
EF523767-1|ABS18833.1| 193|Caenorhabditis elegans ELAV-type RNA... 48 3e-06
EF523766-1|ABS18832.1| 584|Caenorhabditis elegans ELAV-type RNA... 48 3e-06
U24123-1|AAA65224.1| 646|Caenorhabditis elegans polyadenylate-b... 48 4e-06
AL032631-3|CAE54916.1| 583|Caenorhabditis elegans Hypothetical ... 48 4e-06
AL032631-2|CAA21572.1| 646|Caenorhabditis elegans Hypothetical ... 48 4e-06
Z36238-3|CAA85276.1| 404|Caenorhabditis elegans Hypothetical pr... 47 7e-06
DQ485531-1|ABF22491.1| 404|Caenorhabditis elegans RNA-binding p... 47 7e-06
Z83230-6|CAB05746.1| 336|Caenorhabditis elegans Hypothetical pr... 46 1e-05
U28944-7|AAN63457.1| 295|Caenorhabditis elegans Hypothetical pr... 44 5e-05
U28944-6|AAN63456.1| 305|Caenorhabditis elegans Hypothetical pr... 44 5e-05
U28944-5|AAK68191.1| 408|Caenorhabditis elegans Hypothetical pr... 44 5e-05
U28944-4|AAK68192.1| 376|Caenorhabditis elegans Hypothetical pr... 44 5e-05
U23484-3|AAK68298.1| 126|Caenorhabditis elegans Sr protein (spl... 44 5e-05
U23484-2|AAC46767.1| 196|Caenorhabditis elegans Sr protein (spl... 44 6e-05
Z66521-8|CAA91394.1| 281|Caenorhabditis elegans Hypothetical pr... 44 9e-05
Z81108-4|CAB03237.1| 85|Caenorhabditis elegans Hypothetical pr... 43 1e-04
Z49910-5|CAA90120.1| 411|Caenorhabditis elegans Hypothetical pr... 43 1e-04
AL032631-4|CAE54917.1| 586|Caenorhabditis elegans Hypothetical ... 43 1e-04
AL137227-1|CAB70238.2| 611|Caenorhabditis elegans Hypothetical ... 43 1e-04
Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical pr... 42 3e-04
U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA bi... 42 3e-04
Z92826-4|CAB07322.1| 309|Caenorhabditis elegans Hypothetical pr... 40 8e-04
AL132904-14|CAC35847.2| 258|Caenorhabditis elegans Hypothetical... 40 8e-04
AF242767-1|AAG36874.1| 258|Caenorhabditis elegans SF2 protein. 40 8e-04
Z50110-2|CAA90446.1| 566|Caenorhabditis elegans Hypothetical pr... 40 0.001
Z50110-1|CAA90444.1| 692|Caenorhabditis elegans Hypothetical pr... 40 0.001
Z81108-1|CAB03236.1| 83|Caenorhabditis elegans Hypothetical pr... 40 0.001
U23450-2|AAK31468.1| 302|Caenorhabditis elegans Hypothetical pr... 40 0.001
Z36752-6|CAA85327.1| 456|Caenorhabditis elegans Hypothetical pr... 39 0.002
AL110485-8|CAB60356.1| 434|Caenorhabditis elegans Hypothetical ... 39 0.002
Z97628-2|CAB10726.2| 427|Caenorhabditis elegans Hypothetical pr... 39 0.002
Z81080-5|CAB03088.2| 427|Caenorhabditis elegans Hypothetical pr... 39 0.002
Z81080-2|CAD56584.1| 358|Caenorhabditis elegans Hypothetical pr... 39 0.002
Z35601-1|CAA84667.2| 320|Caenorhabditis elegans Hypothetical pr... 38 0.003
AC024791-22|AAF60676.1| 339|Caenorhabditis elegans Rnp (rrm rna... 38 0.003
AC024791-21|AAF60666.1| 749|Caenorhabditis elegans Rnp (rrm rna... 38 0.003
AB036738-1|BAB13470.1| 320|Caenorhabditis elegans neural RNA-bi... 38 0.003
AC084197-11|AAM44397.1| 305|Caenorhabditis elegans Homologous t... 38 0.004
AC084197-10|AAY43984.1| 308|Caenorhabditis elegans Homologous t... 38 0.004
U00052-10|AAK21429.2| 289|Caenorhabditis elegans Rnp (rrm rna b... 38 0.006
U23172-14|AAL02495.1| 165|Caenorhabditis elegans Hypothetical p... 37 0.007
AC024791-23|AAM81102.1| 346|Caenorhabditis elegans Rnp (rrm rna... 37 0.007
Z36238-4|CAD82915.1| 286|Caenorhabditis elegans Hypothetical pr... 36 0.017
AF047662-1|AAC04442.1| 248|Caenorhabditis elegans Suppressor pr... 36 0.017
AL117204-22|CAB55151.1| 331|Caenorhabditis elegans Hypothetical... 36 0.023
Z32683-11|CAA83626.1| 142|Caenorhabditis elegans Hypothetical p... 35 0.030
U39997-3|AAK68389.1| 498|Caenorhabditis elegans Human daz (dele... 35 0.030
AB025253-1|BAA88577.1| 499|Caenorhabditis elegans DAZ-1 protein. 35 0.030
U21320-5|AAA62536.2| 332|Caenorhabditis elegans Rnp (rrm rna bi... 34 0.052
Z73102-13|CAA97405.1| 836|Caenorhabditis elegans Hypothetical p... 34 0.069
Z81473-3|CAB03896.4| 514|Caenorhabditis elegans Hypothetical pr... 33 0.092
AY342388-1|AAQ19851.1| 514|Caenorhabditis elegans putative RNA-... 33 0.092
AF098501-6|AAL38960.1| 315|Caenorhabditis elegans Hypothetical ... 33 0.092
AF098501-5|AAM69104.1| 335|Caenorhabditis elegans Hypothetical ... 33 0.092
AF098501-4|AAL38959.1| 336|Caenorhabditis elegans Hypothetical ... 33 0.092
AC024818-2|AAF60781.1| 302|Caenorhabditis elegans Temporarily a... 33 0.092
Z83127-4|CAB05631.1| 872|Caenorhabditis elegans Hypothetical pr... 33 0.12
U80455-2|AAB37882.2| 420|Caenorhabditis elegans Elav-type rna b... 33 0.12
U23484-7|ABB88232.1| 738|Caenorhabditis elegans Hypothetical pr... 33 0.16
AF067616-7|AAM98029.1| 423|Caenorhabditis elegans Hypothetical ... 32 0.21
AF067616-6|AAC19192.1| 520|Caenorhabditis elegans Hypothetical ... 32 0.21
AF067616-5|AAU05574.1| 497|Caenorhabditis elegans Hypothetical ... 32 0.21
AC006833-6|AAF60950.1| 491|Caenorhabditis elegans Hypothetical ... 32 0.28
D10877-1|BAA01645.1| 346|Caenorhabditis elegans hnRNP like prot... 30 1.1
AF038613-6|ABB51186.1| 347|Caenorhabditis elegans Human hnrnp a... 30 1.1
AF038613-5|AAB92051.1| 346|Caenorhabditis elegans Human hnrnp a... 30 1.1
U80843-12|AAB37961.2| 317|Caenorhabditis elegans Hypothetical p... 29 1.5
AC024845-1|AAF60850.2| 347|Caenorhabditis elegans Hypothetical ... 29 1.5
Z77669-6|CAB01243.2| 371|Caenorhabditis elegans Hypothetical pr... 29 2.0
AF016665-8|AAC71178.1| 324|Caenorhabditis elegans Serpentine re... 29 2.0
Z81120-1|CAB03342.1| 207|Caenorhabditis elegans Hypothetical pr... 29 2.6
Z78537-1|CAB01719.1| 182|Caenorhabditis elegans Hypothetical pr... 28 3.4
Z66494-2|CAA91257.1| 821|Caenorhabditis elegans Hypothetical pr... 28 3.4
Z77666-6|CAB01232.1| 1321|Caenorhabditis elegans Hypothetical pr... 27 6.0
Z22174-4|CAA80129.2| 361|Caenorhabditis elegans Hypothetical pr... 27 6.0
X65054-1|CAA46190.1| 1321|Caenorhabditis elegans P-glycoprotein ... 27 6.0
U23177-3|AAA64333.2| 316|Caenorhabditis elegans Lethal protein ... 27 6.0
AF016679-7|AAB66161.1| 333|Caenorhabditis elegans Hypothetical ... 27 8.0
>Z78019-5|CAB01455.1| 305|Caenorhabditis elegans Hypothetical
protein ZK863.7 protein.
Length = 305
Score = 63.3 bits (147), Expect = 1e-10
Identities = 31/94 (32%), Positives = 50/94 (53%)
Frame = +1
Query: 223 KIFIGNLSDKTTEADLRPLFEKYGTVVECDIVRNYGFVHMENEQVGREAIQNLNGELVHG 402
K+F+GNL D L+ +F+ + V ECDIV+NY FVH+E + V I L G + G
Sbjct: 4 KLFVGNLPDNVDSNKLKQVFQPFCKVTECDIVKNYAFVHIEEDDVD-PIITRLTGYTIDG 62
Query: 403 QAIKIEAAKSRKAPSTPTTKIFVGNLTDKTRAPE 504
+ + I+ + S+ P+ +D+ R P+
Sbjct: 63 KVVNIKKSTSKLRPTPGMPNRCFRCQSDEHRTPQ 96
>U21302-2|AAA92287.1| 305|Caenorhabditis elegans RNP-1 protein.
Length = 305
Score = 63.3 bits (147), Expect = 1e-10
Identities = 31/94 (32%), Positives = 50/94 (53%)
Frame = +1
Query: 223 KIFIGNLSDKTTEADLRPLFEKYGTVVECDIVRNYGFVHMENEQVGREAIQNLNGELVHG 402
K+F+GNL D L+ +F+ + V ECDIV+NY FVH+E + V I L G + G
Sbjct: 4 KLFVGNLPDNVDSNKLKQVFQPFCKVTECDIVKNYAFVHIEEDDVD-PIITRLTGYTIDG 62
Query: 403 QAIKIEAAKSRKAPSTPTTKIFVGNLTDKTRAPE 504
+ + I+ + S+ P+ +D+ R P+
Sbjct: 63 KVVNIKKSTSKLRPTPGMPNRCFRCQSDEHRTPQ 96
>Z78536-3|CAB01717.2| 360|Caenorhabditis elegans Hypothetical
protein C07A4.1 protein.
Length = 360
Score = 58.4 bits (135), Expect = 3e-09
Identities = 25/76 (32%), Positives = 45/76 (59%), Gaps = 2/76 (2%)
Frame = +1
Query: 226 IFIGNLSDKTTEADLRPLFEKYGTVVECDI--VRNYGFVHMENEQVGREAIQNLNGELVH 399
+++GN+S +TT+ADLR LF YG + E I + Y FV E ++ +AI +NG+ +
Sbjct: 239 VYVGNISQQTTDADLRDLFSTYGDIAEVRIFKTQRYAFVRYEKKECATKAIMEMNGKEMA 298
Query: 400 GQAIKIEAAKSRKAPS 447
G ++ +++ P+
Sbjct: 299 GNQVRCSWGRTQAVPN 314
Score = 47.2 bits (107), Expect = 7e-06
Identities = 32/131 (24%), Positives = 61/131 (46%), Gaps = 23/131 (17%)
Frame = +1
Query: 193 ESKMPGTGTFKIFIGNLSDKTTEADLRPLFEKYGTVVECDIVRN--------YGFVHMEN 348
E ++ + F +F+G+LS + L+ F K+G V E ++R+ YGFV N
Sbjct: 126 EMRIDTSKHFHVFVGDLSKDVSNELLKSTFTKFGEVSEAKVIRDVQTQKSKGYGFVSFPN 185
Query: 349 EQVGREAIQNLNGELVHGQAIKIEAAKSR---------------KAPSTPTTKIFVGNLT 483
+Q AI +NG+ + +A++ A + + T ++VGN++
Sbjct: 186 KQNAENAIAGMNGKWIGKRAVRTNWAARKNSEENRDKLTFEQVFNSTKADNTSVYVGNIS 245
Query: 484 DKTRAPEVREL 516
+T ++R+L
Sbjct: 246 QQTTDADLRDL 256
>U23172-15|AAN63408.1| 374|Caenorhabditis elegans Hypothetical
protein F25B5.7d protein.
Length = 374
Score = 52.0 bits (119), Expect = 2e-07
Identities = 19/73 (26%), Positives = 43/73 (58%), Gaps = 1/73 (1%)
Frame = +1
Query: 211 TGTFKIFIGNLSDKTTEADLRPLFEKYGTVVECDIV-RNYGFVHMENEQVGREAIQNLNG 387
TG ++F+GNL ++ E +L+ LF +G + EC + + + F+ ++ A + ++G
Sbjct: 113 TGRCRLFVGNLPNEVKETELKELFSPHGDIAECYLSGKGFAFLRLDTRAHAESAKEAIDG 172
Query: 388 ELVHGQAIKIEAA 426
++HG+ +++ A
Sbjct: 173 RIIHGRQVRVRFA 185
>U23172-12|ABH03526.1| 562|Caenorhabditis elegans Hypothetical
protein F25B5.7a protein.
Length = 562
Score = 52.0 bits (119), Expect = 2e-07
Identities = 19/73 (26%), Positives = 43/73 (58%), Gaps = 1/73 (1%)
Frame = +1
Query: 211 TGTFKIFIGNLSDKTTEADLRPLFEKYGTVVECDIV-RNYGFVHMENEQVGREAIQNLNG 387
TG ++F+GNL ++ E +L+ LF +G + EC + + + F+ ++ A + ++G
Sbjct: 113 TGRCRLFVGNLPNEVKETELKELFSPHGDIAECYLSGKGFAFLRLDTRAHAESAKEAIDG 172
Query: 388 ELVHGQAIKIEAA 426
++HG+ +++ A
Sbjct: 173 RIIHGRQVRVRFA 185
>U41531-7|AAA83161.2| 415|Caenorhabditis elegans Feminizing gene on
x protein 1 protein.
Length = 415
Score = 51.2 bits (117), Expect = 4e-07
Identities = 25/80 (31%), Positives = 45/80 (56%), Gaps = 6/80 (7%)
Frame = +1
Query: 214 GTFKIFIGNLSDKTTEADLRPLFEKYGTVVECDIVRN------YGFVHMENEQVGREAIQ 375
G ++ + N+ + + DL+ +FEK+G V + +I+ N +GFV ME Q A Q
Sbjct: 151 GPKRLHVSNIPFRFRDPDLKTMFEKFGVVSDVEIIFNERGSKGFGFVTMERPQDAERARQ 210
Query: 376 NLNGELVHGQAIKIEAAKSR 435
L+G ++ G+ I++ A +R
Sbjct: 211 ELHGSMIEGRKIEVNCATAR 230
>U14946-1|AAA67723.1| 415|Caenorhabditis elegans ribonucleoprotein
protein.
Length = 415
Score = 51.2 bits (117), Expect = 4e-07
Identities = 25/80 (31%), Positives = 45/80 (56%), Gaps = 6/80 (7%)
Frame = +1
Query: 214 GTFKIFIGNLSDKTTEADLRPLFEKYGTVVECDIVRN------YGFVHMENEQVGREAIQ 375
G ++ + N+ + + DL+ +FEK+G V + +I+ N +GFV ME Q A Q
Sbjct: 151 GPKRLHVSNIPFRFRDPDLKTMFEKFGVVSDVEIIFNERGSKGFGFVTMERPQDAERARQ 210
Query: 376 NLNGELVHGQAIKIEAAKSR 435
L+G ++ G+ I++ A +R
Sbjct: 211 ELHGSMIEGRKIEVNCATAR 230
>Z66521-4|CAD59160.1| 150|Caenorhabditis elegans Hypothetical
protein W02B12.3c protein.
Length = 150
Score = 49.6 bits (113), Expect = 1e-06
Identities = 19/71 (26%), Positives = 43/71 (60%)
Frame = +1
Query: 223 KIFIGNLSDKTTEADLRPLFEKYGTVVECDIVRNYGFVHMENEQVGREAIQNLNGELVHG 402
+I+IG L+ + +E D+ F YG + + + +GFV ++++ +A+ +LNG+ + G
Sbjct: 4 RIYIGRLTSRVSEKDIEHFFRGYGQIRDVLLKNGFGFVEFDDKRDAEDAVHDLNGKELGG 63
Query: 403 QAIKIEAAKSR 435
+ + ++ +K R
Sbjct: 64 ERVILDYSKPR 74
>Z66521-3|CAD59159.1| 148|Caenorhabditis elegans Hypothetical
protein W02B12.3b protein.
Length = 148
Score = 49.6 bits (113), Expect = 1e-06
Identities = 19/71 (26%), Positives = 43/71 (60%)
Frame = +1
Query: 223 KIFIGNLSDKTTEADLRPLFEKYGTVVECDIVRNYGFVHMENEQVGREAIQNLNGELVHG 402
+I+IG L+ + +E D+ F YG + + + +GFV ++++ +A+ +LNG+ + G
Sbjct: 4 RIYIGRLTSRVSEKDIEHFFRGYGQIRDVLLKNGFGFVEFDDKRDAEDAVHDLNGKELGG 63
Query: 403 QAIKIEAAKSR 435
+ + ++ +K R
Sbjct: 64 ERVILDYSKPR 74
>Z66521-2|CAA91395.1| 312|Caenorhabditis elegans Hypothetical
protein W02B12.3a protein.
Length = 312
Score = 49.6 bits (113), Expect = 1e-06
Identities = 19/71 (26%), Positives = 43/71 (60%)
Frame = +1
Query: 223 KIFIGNLSDKTTEADLRPLFEKYGTVVECDIVRNYGFVHMENEQVGREAIQNLNGELVHG 402
+I+IG L+ + +E D+ F YG + + + +GFV ++++ +A+ +LNG+ + G
Sbjct: 4 RIYIGRLTSRVSEKDIEHFFRGYGQIRDVLLKNGFGFVEFDDKRDAEDAVHDLNGKELGG 63
Query: 403 QAIKIEAAKSR 435
+ + ++ +K R
Sbjct: 64 ERVILDYSKPR 74
>U80455-1|AAB37881.1| 584|Caenorhabditis elegans Elav-type rna
binding protein familyprotein 1, isoform a protein.
Length = 584
Score = 48.4 bits (110), Expect = 3e-06
Identities = 31/115 (26%), Positives = 55/115 (47%), Gaps = 11/115 (9%)
Frame = +1
Query: 205 PGTGTFKIFIGNLSDKTTEADLRPLFEKYGTVVECDIVRNYG-----------FVHMENE 351
P T K+F+G + + E D R LFEKYG+V C+I+R+ F H ++
Sbjct: 50 PDTDAIKMFVGQIPRQWNETDCRRLFEKYGSVFSCNILRDKSTQASKGCCFVTFYHRKDA 109
Query: 352 QVGREAIQNLNGELVHGQAIKIEAAKSRKAPSTPTTKIFVGNLTDKTRAPEVREL 516
+ A+ N+ +++ G ++ K + K+F+G L+ K +RE+
Sbjct: 110 IEAQGALHNI--KVIEGMHHPVQ-MKPADTENRNERKLFIGQLSKKHNEENLREI 161
Score = 39.1 bits (87), Expect = 0.002
Identities = 15/34 (44%), Positives = 24/34 (70%)
Frame = +1
Query: 223 KIFIGNLSDKTTEADLRPLFEKYGTVVECDIVRN 324
K+FIG LS K E +LR +F K+G + +C ++R+
Sbjct: 143 KLFIGQLSKKHNEENLREIFAKFGHIEDCSVLRD 176
Score = 33.1 bits (72), Expect = 0.12
Identities = 25/94 (26%), Positives = 40/94 (42%), Gaps = 8/94 (8%)
Frame = +1
Query: 187 VSESKMPGTGTFKIFIGNLSDKTTEADLRPLFEKYGTVVEC----DIVRN----YGFVHM 342
V + G +FI +L ++DL F +G ++ D V N +GFV
Sbjct: 488 VGNGDVKGPDGANLFIYHLPQDFGDSDLINTFAPFGGILSAKVFIDKVTNLSKCFGFVSY 547
Query: 343 ENEQVGREAIQNLNGELVHGQAIKIEAAKSRKAP 444
EN Q AI +NG + + +K++ R P
Sbjct: 548 ENAQSATNAISAMNGFQIGSKRLKVQLKVDRGNP 581
>U53931-1|AAA98566.1| 584|Caenorhabditis elegans elav-type
ribonucleoprotein protein.
Length = 584
Score = 48.4 bits (110), Expect = 3e-06
Identities = 31/115 (26%), Positives = 55/115 (47%), Gaps = 11/115 (9%)
Frame = +1
Query: 205 PGTGTFKIFIGNLSDKTTEADLRPLFEKYGTVVECDIVRNYG-----------FVHMENE 351
P T K+F+G + + E D R LFEKYG+V C+I+R+ F H ++
Sbjct: 50 PDTDAIKMFVGQIPRQWNETDCRRLFEKYGSVFSCNILRDKSTQASKGCCFVTFYHRKDA 109
Query: 352 QVGREAIQNLNGELVHGQAIKIEAAKSRKAPSTPTTKIFVGNLTDKTRAPEVREL 516
+ A+ N+ +++ G ++ K + K+F+G L+ K +RE+
Sbjct: 110 IEAQGALHNI--KVIEGMHHPVQ-MKPADTENRNERKLFIGQLSKKHNEENLREI 161
Score = 39.1 bits (87), Expect = 0.002
Identities = 15/34 (44%), Positives = 24/34 (70%)
Frame = +1
Query: 223 KIFIGNLSDKTTEADLRPLFEKYGTVVECDIVRN 324
K+FIG LS K E +LR +F K+G + +C ++R+
Sbjct: 143 KLFIGQLSKKHNEENLREIFAKFGHIEDCSVLRD 176
Score = 33.1 bits (72), Expect = 0.12
Identities = 25/94 (26%), Positives = 40/94 (42%), Gaps = 8/94 (8%)
Frame = +1
Query: 187 VSESKMPGTGTFKIFIGNLSDKTTEADLRPLFEKYGTVVEC----DIVRN----YGFVHM 342
V + G +FI +L ++DL F +G ++ D V N +GFV
Sbjct: 488 VGNGDVKGPDGANLFIYHLPQDFGDSDLINTFAPFGGILSAKVFIDKVTNLSKCFGFVSY 547
Query: 343 ENEQVGREAIQNLNGELVHGQAIKIEAAKSRKAP 444
EN Q AI +NG + + +K++ R P
Sbjct: 548 ENAQSATNAISAMNGFQIGSKRLKVQLKVDRGNP 581
>EF523770-1|ABS18836.1| 513|Caenorhabditis elegans ELAV-type RNA
binding protein variantE protein.
Length = 513
Score = 48.4 bits (110), Expect = 3e-06
Identities = 31/115 (26%), Positives = 55/115 (47%), Gaps = 11/115 (9%)
Frame = +1
Query: 205 PGTGTFKIFIGNLSDKTTEADLRPLFEKYGTVVECDIVRNYG-----------FVHMENE 351
P T K+F+G + + E D R LFEKYG+V C+I+R+ F H ++
Sbjct: 50 PDTDAIKMFVGQIPRQWNETDCRRLFEKYGSVFSCNILRDKSTQASKGCCFVTFYHRKDA 109
Query: 352 QVGREAIQNLNGELVHGQAIKIEAAKSRKAPSTPTTKIFVGNLTDKTRAPEVREL 516
+ A+ N+ +++ G ++ K + K+F+G L+ K +RE+
Sbjct: 110 IEAQGALHNI--KVIEGMHHPVQ-MKPADTENRNERKLFIGQLSKKHNEENLREI 161
Score = 39.1 bits (87), Expect = 0.002
Identities = 15/34 (44%), Positives = 24/34 (70%)
Frame = +1
Query: 223 KIFIGNLSDKTTEADLRPLFEKYGTVVECDIVRN 324
K+FIG LS K E +LR +F K+G + +C ++R+
Sbjct: 143 KLFIGQLSKKHNEENLREIFAKFGHIEDCSVLRD 176
Score = 33.1 bits (72), Expect = 0.12
Identities = 25/94 (26%), Positives = 40/94 (42%), Gaps = 8/94 (8%)
Frame = +1
Query: 187 VSESKMPGTGTFKIFIGNLSDKTTEADLRPLFEKYGTVVEC----DIVRN----YGFVHM 342
V + G +FI +L ++DL F +G ++ D V N +GFV
Sbjct: 417 VGNGDVKGPDGANLFIYHLPQDFGDSDLINTFAPFGGILSAKVFIDKVTNLSKCFGFVSY 476
Query: 343 ENEQVGREAIQNLNGELVHGQAIKIEAAKSRKAP 444
EN Q AI +NG + + +K++ R P
Sbjct: 477 ENAQSATNAISAMNGFQIGSKRLKVQLKVDRGNP 510
>EF523769-1|ABS18835.1| 327|Caenorhabditis elegans ELAV-type RNA
binding protein variantD protein.
Length = 327
Score = 48.4 bits (110), Expect = 3e-06
Identities = 31/115 (26%), Positives = 55/115 (47%), Gaps = 11/115 (9%)
Frame = +1
Query: 205 PGTGTFKIFIGNLSDKTTEADLRPLFEKYGTVVECDIVRNYG-----------FVHMENE 351
P T K+F+G + + E D R LFEKYG+V C+I+R+ F H ++
Sbjct: 50 PDTDAIKMFVGQIPRQWNETDCRRLFEKYGSVFSCNILRDKSTQASKGCCFVTFYHRKDA 109
Query: 352 QVGREAIQNLNGELVHGQAIKIEAAKSRKAPSTPTTKIFVGNLTDKTRAPEVREL 516
+ A+ N+ +++ G ++ K + K+F+G L+ K +RE+
Sbjct: 110 IEAQGALHNI--KVIEGMHHPVQ-MKPADTENRNERKLFIGQLSKKHNEENLREI 161
Score = 39.1 bits (87), Expect = 0.002
Identities = 15/34 (44%), Positives = 24/34 (70%)
Frame = +1
Query: 223 KIFIGNLSDKTTEADLRPLFEKYGTVVECDIVRN 324
K+FIG LS K E +LR +F K+G + +C ++R+
Sbjct: 143 KLFIGQLSKKHNEENLREIFAKFGHIEDCSVLRD 176
>EF523768-1|ABS18834.1| 378|Caenorhabditis elegans ELAV-type RNA
binding protein variantC protein.
Length = 378
Score = 48.4 bits (110), Expect = 3e-06
Identities = 31/115 (26%), Positives = 55/115 (47%), Gaps = 11/115 (9%)
Frame = +1
Query: 205 PGTGTFKIFIGNLSDKTTEADLRPLFEKYGTVVECDIVRNYG-----------FVHMENE 351
P T K+F+G + + E D R LFEKYG+V C+I+R+ F H ++
Sbjct: 50 PDTDAIKMFVGQIPRQWNETDCRRLFEKYGSVFSCNILRDKSTQASKGCCFVTFYHRKDA 109
Query: 352 QVGREAIQNLNGELVHGQAIKIEAAKSRKAPSTPTTKIFVGNLTDKTRAPEVREL 516
+ A+ N+ +++ G ++ K + K+F+G L+ K +RE+
Sbjct: 110 IEAQGALHNI--KVIEGMHHPVQ-MKPADTENRNERKLFIGQLSKKHNEENLREI 161
Score = 39.1 bits (87), Expect = 0.002
Identities = 15/34 (44%), Positives = 24/34 (70%)
Frame = +1
Query: 223 KIFIGNLSDKTTEADLRPLFEKYGTVVECDIVRN 324
K+FIG LS K E +LR +F K+G + +C ++R+
Sbjct: 143 KLFIGQLSKKHNEENLREIFAKFGHIEDCSVLRD 176
>EF523767-1|ABS18833.1| 193|Caenorhabditis elegans ELAV-type RNA
binding protein variantB protein.
Length = 193
Score = 48.4 bits (110), Expect = 3e-06
Identities = 31/115 (26%), Positives = 55/115 (47%), Gaps = 11/115 (9%)
Frame = +1
Query: 205 PGTGTFKIFIGNLSDKTTEADLRPLFEKYGTVVECDIVRNYG-----------FVHMENE 351
P T K+F+G + + E D R LFEKYG+V C+I+R+ F H ++
Sbjct: 50 PDTDAIKMFVGQIPRQWNETDCRRLFEKYGSVFSCNILRDKSTQASKGCCFVTFYHRKDA 109
Query: 352 QVGREAIQNLNGELVHGQAIKIEAAKSRKAPSTPTTKIFVGNLTDKTRAPEVREL 516
+ A+ N+ +++ G ++ K + K+F+G L+ K +RE+
Sbjct: 110 IEAQGALHNI--KVIEGMHHPVQ-MKPADTENRNERKLFIGQLSKKHNEENLREI 161
Score = 39.1 bits (87), Expect = 0.002
Identities = 15/34 (44%), Positives = 24/34 (70%)
Frame = +1
Query: 223 KIFIGNLSDKTTEADLRPLFEKYGTVVECDIVRN 324
K+FIG LS K E +LR +F K+G + +C ++R+
Sbjct: 143 KLFIGQLSKKHNEENLREIFAKFGHIEDCSVLRD 176
>EF523766-1|ABS18832.1| 584|Caenorhabditis elegans ELAV-type RNA
binding protein variantA protein.
Length = 584
Score = 48.4 bits (110), Expect = 3e-06
Identities = 31/115 (26%), Positives = 55/115 (47%), Gaps = 11/115 (9%)
Frame = +1
Query: 205 PGTGTFKIFIGNLSDKTTEADLRPLFEKYGTVVECDIVRNYG-----------FVHMENE 351
P T K+F+G + + E D R LFEKYG+V C+I+R+ F H ++
Sbjct: 50 PDTDAIKMFVGQIPRQWNETDCRRLFEKYGSVFSCNILRDKSTQASKGCCFVTFYHRKDA 109
Query: 352 QVGREAIQNLNGELVHGQAIKIEAAKSRKAPSTPTTKIFVGNLTDKTRAPEVREL 516
+ A+ N+ +++ G ++ K + K+F+G L+ K +RE+
Sbjct: 110 IEAQGALHNI--KVIEGMHHPVQ-MKPADTENRNERKLFIGQLSKKHNEENLREI 161
Score = 39.1 bits (87), Expect = 0.002
Identities = 15/34 (44%), Positives = 24/34 (70%)
Frame = +1
Query: 223 KIFIGNLSDKTTEADLRPLFEKYGTVVECDIVRN 324
K+FIG LS K E +LR +F K+G + +C ++R+
Sbjct: 143 KLFIGQLSKKHNEENLREIFAKFGHIEDCSVLRD 176
Score = 33.1 bits (72), Expect = 0.12
Identities = 25/94 (26%), Positives = 40/94 (42%), Gaps = 8/94 (8%)
Frame = +1
Query: 187 VSESKMPGTGTFKIFIGNLSDKTTEADLRPLFEKYGTVVEC----DIVRN----YGFVHM 342
V + G +FI +L ++DL F +G ++ D V N +GFV
Sbjct: 488 VGNGDVKGPDGANLFIYHLPQDFGDSDLINTFAPFGGILSAKVFIDKVTNLSKCFGFVSY 547
Query: 343 ENEQVGREAIQNLNGELVHGQAIKIEAAKSRKAP 444
EN Q AI +NG + + +K++ R P
Sbjct: 548 ENAQSATNAISAMNGFQIGSKRLKVQLKVDRGNP 581
>U24123-1|AAA65224.1| 646|Caenorhabditis elegans
polyadenylate-binding protein protein.
Length = 646
Score = 48.0 bits (109), Expect = 4e-06
Identities = 31/109 (28%), Positives = 50/109 (45%), Gaps = 14/109 (12%)
Frame = +1
Query: 202 MPGTGTFKIFIGNLSDKTTEADLRPLFEKYGTVVECDIV-------RNYGFVHMENEQVG 360
M +G IFI NL + F +G ++ C + + YGFVH E E+
Sbjct: 114 MRRSGAGNIFIKNLDKVIDNKSIYDTFSLFGNILSCKVAIDEDGFSKGYGFVHFETEEAA 173
Query: 361 REAIQNLNGELVHGQAIKI-----EAAKSRKAPSTPT--TKIFVGNLTD 486
+ AIQ +NG L+ G+ + + A ++R+ T T ++V N D
Sbjct: 174 QNAIQKVNGMLLAGKKVFVGKFQPRAQRNRELGETAKQFTNVYVKNFGD 222
Score = 41.9 bits (94), Expect = 3e-04
Identities = 17/77 (22%), Positives = 38/77 (49%), Gaps = 6/77 (7%)
Frame = +1
Query: 226 IFIGNLSDKTTEADLRPLFEKYGTVVECDIV------RNYGFVHMENEQVGREAIQNLNG 387
+++ N D + L +F K+G + C+++ + +GFV N + A+Q L+
Sbjct: 215 VYVKNFGDHYNKETLEKVFAKFGNITSCEVMTVEGKSKGFGFVAFANPEEAETAVQALHD 274
Query: 388 ELVHGQAIKIEAAKSRK 438
+ G +K+ +++K
Sbjct: 275 STIEGTDLKLHVCRAQK 291
>AL032631-3|CAE54916.1| 583|Caenorhabditis elegans Hypothetical
protein Y106G6H.2b protein.
Length = 583
Score = 48.0 bits (109), Expect = 4e-06
Identities = 31/109 (28%), Positives = 50/109 (45%), Gaps = 14/109 (12%)
Frame = +1
Query: 202 MPGTGTFKIFIGNLSDKTTEADLRPLFEKYGTVVECDIV-------RNYGFVHMENEQVG 360
M +G IFI NL + F +G ++ C + + YGFVH E E+
Sbjct: 51 MRRSGAGNIFIKNLDKVIDNKSIYDTFSLFGNILSCKVAIDEDGFSKGYGFVHFETEEAA 110
Query: 361 REAIQNLNGELVHGQAIKI-----EAAKSRKAPSTPT--TKIFVGNLTD 486
+ AIQ +NG L+ G+ + + A ++R+ T T ++V N D
Sbjct: 111 QNAIQKVNGMLLAGKKVFVGKFQPRAQRNRELGETAKQFTNVYVKNFGD 159
Score = 43.2 bits (97), Expect = 1e-04
Identities = 18/77 (23%), Positives = 38/77 (49%), Gaps = 6/77 (7%)
Frame = +1
Query: 226 IFIGNLSDKTTEADLRPLFEKYGTVVECDIV------RNYGFVHMENEQVGREAIQNLNG 387
+++ N D + L LF K+G + C+++ + +GFV N + A+Q L+
Sbjct: 152 VYVKNFGDHYNKETLEKLFAKFGNITSCEVMTVEGKSKGFGFVAFANPEEAETAVQALHD 211
Query: 388 ELVHGQAIKIEAAKSRK 438
+ G +K+ +++K
Sbjct: 212 STIEGTDLKLHVCRAQK 228
>AL032631-2|CAA21572.1| 646|Caenorhabditis elegans Hypothetical
protein Y106G6H.2a protein.
Length = 646
Score = 48.0 bits (109), Expect = 4e-06
Identities = 31/109 (28%), Positives = 50/109 (45%), Gaps = 14/109 (12%)
Frame = +1
Query: 202 MPGTGTFKIFIGNLSDKTTEADLRPLFEKYGTVVECDIV-------RNYGFVHMENEQVG 360
M +G IFI NL + F +G ++ C + + YGFVH E E+
Sbjct: 114 MRRSGAGNIFIKNLDKVIDNKSIYDTFSLFGNILSCKVAIDEDGFSKGYGFVHFETEEAA 173
Query: 361 REAIQNLNGELVHGQAIKI-----EAAKSRKAPSTPT--TKIFVGNLTD 486
+ AIQ +NG L+ G+ + + A ++R+ T T ++V N D
Sbjct: 174 QNAIQKVNGMLLAGKKVFVGKFQPRAQRNRELGETAKQFTNVYVKNFGD 222
Score = 43.2 bits (97), Expect = 1e-04
Identities = 18/77 (23%), Positives = 38/77 (49%), Gaps = 6/77 (7%)
Frame = +1
Query: 226 IFIGNLSDKTTEADLRPLFEKYGTVVECDIV------RNYGFVHMENEQVGREAIQNLNG 387
+++ N D + L LF K+G + C+++ + +GFV N + A+Q L+
Sbjct: 215 VYVKNFGDHYNKETLEKLFAKFGNITSCEVMTVEGKSKGFGFVAFANPEEAETAVQALHD 274
Query: 388 ELVHGQAIKIEAAKSRK 438
+ G +K+ +++K
Sbjct: 275 STIEGTDLKLHVCRAQK 291
>Z36238-3|CAA85276.1| 404|Caenorhabditis elegans Hypothetical
protein R74.5a protein.
Length = 404
Score = 47.2 bits (107), Expect = 7e-06
Identities = 27/88 (30%), Positives = 42/88 (47%), Gaps = 6/88 (6%)
Frame = +1
Query: 190 SESKMPGTGTFKIFIGNLSDKTTEADLRPLFEKYGTVVECDIVRN------YGFVHMENE 351
S S G ++ + N+ K E DL +FEK G VV+ +I+ N +GFV M+N
Sbjct: 90 STSSSSTDGPRRLHVSNIPFKYREPDLTAMFEKVGPVVDVEIIFNERGSKGFGFVTMQNP 149
Query: 352 QVGREAIQNLNGELVHGQAIKIEAAKSR 435
A NG + G+ +++ A R
Sbjct: 150 DDADRARAEFNGTTIEGRRVEVNLATQR 177
>DQ485531-1|ABF22491.1| 404|Caenorhabditis elegans RNA-binding
protein ASD-1 protein.
Length = 404
Score = 47.2 bits (107), Expect = 7e-06
Identities = 27/88 (30%), Positives = 42/88 (47%), Gaps = 6/88 (6%)
Frame = +1
Query: 190 SESKMPGTGTFKIFIGNLSDKTTEADLRPLFEKYGTVVECDIVRN------YGFVHMENE 351
S S G ++ + N+ K E DL +FEK G VV+ +I+ N +GFV M+N
Sbjct: 90 STSSSSTDGPRRLHVSNIPFKYREPDLTAMFEKVGPVVDVEIIFNERGSKGFGFVTMQNP 149
Query: 352 QVGREAIQNLNGELVHGQAIKIEAAKSR 435
A NG + G+ +++ A R
Sbjct: 150 DDADRARAEFNGTTIEGRRVEVNLATQR 177
>Z83230-6|CAB05746.1| 336|Caenorhabditis elegans Hypothetical
protein F56A8.6 protein.
Length = 336
Score = 46.4 bits (105), Expect = 1e-05
Identities = 23/75 (30%), Positives = 42/75 (56%), Gaps = 8/75 (10%)
Frame = +1
Query: 226 IFIGNLSDKTTEADLRPLFEKYGTVVECDIV--------RNYGFVHMENEQVGREAIQNL 381
+F+GN+S +E +R +F K G V+ +V + YGF+ + Q AI+NL
Sbjct: 20 VFVGNISYDVSEDTIRSIFSKAGNVLSIKMVHDRETGKPKGYGFIEFPDIQTAEVAIRNL 79
Query: 382 NGELVHGQAIKIEAA 426
NG + G+ +++++A
Sbjct: 80 NGYELSGRILRVDSA 94
>U28944-7|AAN63457.1| 295|Caenorhabditis elegans Hypothetical
protein C18A3.5f protein.
Length = 295
Score = 44.4 bits (100), Expect = 5e-05
Identities = 23/82 (28%), Positives = 42/82 (51%), Gaps = 8/82 (9%)
Frame = +1
Query: 193 ESKMPGTGTFKIFIGNLSDKTTEADLRPLFEKYGTVVECDIVRN--------YGFVHMEN 348
+SK+ T F +F+G+LS + LR F+ +G V + ++R+ YGFV
Sbjct: 13 QSKIDTTRHFHVFVGDLSSEVDNQKLREAFQPFGDVSDAKVIRDTNTTKSKGYGFVSYPK 72
Query: 349 EQVGREAIQNLNGELVHGQAIK 414
+ AI+ +NG+ + + I+
Sbjct: 73 REEAERAIEQMNGQWLGRRTIR 94
>U28944-6|AAN63456.1| 305|Caenorhabditis elegans Hypothetical
protein C18A3.5e protein.
Length = 305
Score = 44.4 bits (100), Expect = 5e-05
Identities = 23/82 (28%), Positives = 42/82 (51%), Gaps = 8/82 (9%)
Frame = +1
Query: 193 ESKMPGTGTFKIFIGNLSDKTTEADLRPLFEKYGTVVECDIVRN--------YGFVHMEN 348
+SK+ T F +F+G+LS + LR F+ +G V + ++R+ YGFV
Sbjct: 23 QSKIDTTRHFHVFVGDLSSEVDNQKLREAFQPFGDVSDAKVIRDTNTTKSKGYGFVSYPK 82
Query: 349 EQVGREAIQNLNGELVHGQAIK 414
+ AI+ +NG+ + + I+
Sbjct: 83 REEAERAIEQMNGQWLGRRTIR 104
>U28944-5|AAK68191.1| 408|Caenorhabditis elegans Hypothetical
protein C18A3.5a protein.
Length = 408
Score = 44.4 bits (100), Expect = 5e-05
Identities = 23/82 (28%), Positives = 42/82 (51%), Gaps = 8/82 (9%)
Frame = +1
Query: 193 ESKMPGTGTFKIFIGNLSDKTTEADLRPLFEKYGTVVECDIVRN--------YGFVHMEN 348
+SK+ T F +F+G+LS + LR F+ +G V + ++R+ YGFV
Sbjct: 126 QSKIDTTRHFHVFVGDLSSEVDNQKLREAFQPFGDVSDAKVIRDTNTTKSKGYGFVSYPK 185
Query: 349 EQVGREAIQNLNGELVHGQAIK 414
+ AI+ +NG+ + + I+
Sbjct: 186 REEAERAIEQMNGQWLGRRTIR 207
>U28944-4|AAK68192.1| 376|Caenorhabditis elegans Hypothetical
protein C18A3.5b protein.
Length = 376
Score = 44.4 bits (100), Expect = 5e-05
Identities = 23/82 (28%), Positives = 42/82 (51%), Gaps = 8/82 (9%)
Frame = +1
Query: 193 ESKMPGTGTFKIFIGNLSDKTTEADLRPLFEKYGTVVECDIVRN--------YGFVHMEN 348
+SK+ T F +F+G+LS + LR F+ +G V + ++R+ YGFV
Sbjct: 94 QSKIDTTRHFHVFVGDLSSEVDNQKLREAFQPFGDVSDAKVIRDTNTTKSKGYGFVSYPK 153
Query: 349 EQVGREAIQNLNGELVHGQAIK 414
+ AI+ +NG+ + + I+
Sbjct: 154 REEAERAIEQMNGQWLGRRTIR 175
>U23484-3|AAK68298.1| 126|Caenorhabditis elegans Sr protein
(splicing factor) protein4, isoform b protein.
Length = 126
Score = 44.4 bits (100), Expect = 5e-05
Identities = 35/110 (31%), Positives = 53/110 (48%), Gaps = 9/110 (8%)
Frame = +1
Query: 214 GTFKIFIGNLSDKTTEADLRPLFEKYGTVVECDIVRN--------YGFVHMENEQVGREA 369
G + I NLS +TT DLR FE+YG + + I R+ +GFV + A
Sbjct: 17 GLTSLKIDNLSYQTTPNDLRRTFERYGDIGDVHIPRDKYSRQSKGFGFVRFYERRDAEHA 76
Query: 370 IQNLNGELVHGQAIKIEAAKSRKAPSTPTTKIFVGNLTDKTRA-PEVREL 516
+ +G+LV G+ +++ AK + PS G +T A P+V EL
Sbjct: 77 LDRTDGKLVDGRELRVTLAKYDR-PSDERGGRGGGGGRRRTAAEPDVAEL 125
>U23484-2|AAC46767.1| 196|Caenorhabditis elegans Sr protein
(splicing factor) protein4, isoform a protein.
Length = 196
Score = 44.0 bits (99), Expect = 6e-05
Identities = 26/80 (32%), Positives = 41/80 (51%), Gaps = 8/80 (10%)
Frame = +1
Query: 214 GTFKIFIGNLSDKTTEADLRPLFEKYGTVVECDIVRN--------YGFVHMENEQVGREA 369
G + I NLS +TT DLR FE+YG + + I R+ +GFV + A
Sbjct: 17 GLTSLKIDNLSYQTTPNDLRRTFERYGDIGDVHIPRDKYSRQSKGFGFVRFYERRDAEHA 76
Query: 370 IQNLNGELVHGQAIKIEAAK 429
+ +G+LV G+ +++ AK
Sbjct: 77 LDRTDGKLVDGRELRVTLAK 96
>Z66521-8|CAA91394.1| 281|Caenorhabditis elegans Hypothetical
protein W02B12.2 protein.
Length = 281
Score = 43.6 bits (98), Expect = 9e-05
Identities = 16/66 (24%), Positives = 40/66 (60%)
Frame = +1
Query: 223 KIFIGNLSDKTTEADLRPLFEKYGTVVECDIVRNYGFVHMENEQVGREAIQNLNGELVHG 402
+++IG L ++ ++ D+ F YG + + + +GFV ++++ +A+ +LNG+ + G
Sbjct: 3 RVYIGRLPNRASDRDVEHFFRGYGKLSDVIMKNGFGFVDFQDQRDADDAVHDLNGKELCG 62
Query: 403 QAIKIE 420
+ + +E
Sbjct: 63 ERVILE 68
>Z81108-4|CAB03237.1| 85|Caenorhabditis elegans Hypothetical
protein R09B3.3 protein.
Length = 85
Score = 43.2 bits (97), Expect = 1e-04
Identities = 24/80 (30%), Positives = 39/80 (48%), Gaps = 8/80 (10%)
Frame = +1
Query: 220 FKIFIGNLSDKTTEADLRPLFEKYGTVVECDIV--------RNYGFVHMENEQVGREAIQ 375
F +++GN +TTE DL F + G V IV R + FV E + A+
Sbjct: 4 FSVYVGNAPFQTTEDDLGNYFSQAGNVSNVRIVCDRETGRPRGFAFVEFTEEAAAQRAVD 63
Query: 376 NLNGELVHGQAIKIEAAKSR 435
NG +G+A+++ A++R
Sbjct: 64 QFNGVDFNGRALRVNLAQNR 83
>Z49910-5|CAA90120.1| 411|Caenorhabditis elegans Hypothetical
protein F44G4.4a protein.
Length = 411
Score = 43.2 bits (97), Expect = 1e-04
Identities = 30/98 (30%), Positives = 50/98 (51%), Gaps = 9/98 (9%)
Frame = +1
Query: 250 KTTEADLRPLFEKYGTVVECDIVR-------NYGFVHMENEQVGRE-AIQNLNGELVHGQ 405
KTT+ + FE GTVV C+I R +GFV M + VG + + + ++ G+
Sbjct: 183 KTTDECFQKYFEDIGTVVFCEIKRKSDGNSKGFGFVRMSS--VGEQNKVLAIPQHMIDGR 240
Query: 406 AIKIEAAKSRKAPSTPT-TKIFVGNLTDKTRAPEVREL 516
++ R P+ ++IFVG LTDK ++R++
Sbjct: 241 RCDVKVPDGRDKQGRPSISRIFVGRLTDKVDEHQLRKV 278
Score = 27.9 bits (59), Expect = 4.6
Identities = 23/82 (28%), Positives = 40/82 (48%), Gaps = 10/82 (12%)
Frame = +1
Query: 223 KIFIGNLSDKTTEADLRPLF----EKY-GTVVECDI-----VRNYGFVHMENEQVGREAI 372
+IF+G L+DK E LR +F + Y T V D+ R + FV + + + E I
Sbjct: 260 RIFVGRLTDKVDEHQLRKVFGDEAKSYIETAVVTDVFIPKPFRGFAFVTLSSAEAA-ERI 318
Query: 373 QNLNGELVHGQAIKIEAAKSRK 438
+ V+G ++ + A+ R+
Sbjct: 319 VSKGSLTVNGLSVGLSIAQPRE 340
>AL032631-4|CAE54917.1| 586|Caenorhabditis elegans Hypothetical
protein Y106G6H.2c protein.
Length = 586
Score = 43.2 bits (97), Expect = 1e-04
Identities = 18/77 (23%), Positives = 38/77 (49%), Gaps = 6/77 (7%)
Frame = +1
Query: 226 IFIGNLSDKTTEADLRPLFEKYGTVVECDIV------RNYGFVHMENEQVGREAIQNLNG 387
+++ N D + L LF K+G + C+++ + +GFV N + A+Q L+
Sbjct: 155 VYVKNFGDHYNKETLEKLFAKFGNITSCEVMTVEGKSKGFGFVAFANPEEAETAVQALHD 214
Query: 388 ELVHGQAIKIEAAKSRK 438
+ G +K+ +++K
Sbjct: 215 STIEGTDLKLHVCRAQK 231
>AL137227-1|CAB70238.2| 611|Caenorhabditis elegans Hypothetical
protein F58D5.1 protein.
Length = 611
Score = 42.7 bits (96), Expect = 1e-04
Identities = 18/68 (26%), Positives = 36/68 (52%)
Frame = +1
Query: 226 IFIGNLSDKTTEADLRPLFEKYGTVVECDIVRNYGFVHMENEQVGREAIQNLNGELVHGQ 405
++I N+ + TE L LF++Y ++ V++Y F+H +A++ NG+ + G
Sbjct: 379 LYIRNIKEAVTEEKLNELFKEYASLDRVKKVKDYAFIHFNERDDCLKAMEEWNGKELEGT 438
Query: 406 AIKIEAAK 429
++ AK
Sbjct: 439 VVEASLAK 446
Score = 35.1 bits (77), Expect = 0.030
Identities = 27/106 (25%), Positives = 49/106 (46%), Gaps = 9/106 (8%)
Frame = +1
Query: 223 KIFIGNLSDKTTEADLRPLFEKYGTVVECDIV--------RNYGFVHMENEQVGREAIQN 378
+I++G++ E L PLFEK G + + ++ R Y FV N++ A +
Sbjct: 201 EIYVGHIPTDVFEDTLVPLFEKSGKIWDLRLMMDPMSGASRGYAFVTYCNKEDAAAAAKT 260
Query: 379 LNG-ELVHGQAIKIEAAKSRKAPSTPTTKIFVGNLTDKTRAPEVRE 513
+G E+ G+ +K+ S T++F+GN+ E+ E
Sbjct: 261 YDGHEISTGKPLKVNV-------SIANTRLFIGNIPKTKSKDEILE 299
>Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical
protein C08B11.5 protein.
Length = 388
Score = 41.9 bits (94), Expect = 3e-04
Identities = 28/93 (30%), Positives = 47/93 (50%), Gaps = 8/93 (8%)
Frame = +1
Query: 226 IFIGNLSDKTTEADLRPLFEKYGTVVECDIVRN--------YGFVHMENEQVGREAIQNL 381
I++G L +K +E+ L L + G VV ++ ++ +GFV E+ AI+ L
Sbjct: 15 IYVGGLDEKVSESILWELMVQAGPVVSVNMPKDRVTANHQGFGFVEFMGEEDADYAIKIL 74
Query: 382 NGELVHGQAIKIEAAKSRKAPSTPTTKIFVGNL 480
N ++G+ IK+ A + + IFVGNL
Sbjct: 75 NMIKLYGKPIKVNKASAHEKNMDVGANIFVGNL 107
Score = 30.3 bits (65), Expect = 0.85
Identities = 18/79 (22%), Positives = 36/79 (45%), Gaps = 9/79 (11%)
Frame = +1
Query: 226 IFIGNLSDKTTEADLRPLFEKYGTV---------VECDIVRNYGFVHMENEQVGREAIQN 378
IF+GNL + E L F +G + V+ + + F++ + + A++
Sbjct: 102 IFVGNLDPEVDEKLLYDTFSAFGVILQVPKIMRDVDSGTSKGFAFINFASFEASDTALEA 161
Query: 379 LNGELVHGQAIKIEAAKSR 435
+NG+ + +AI + A R
Sbjct: 162 MNGQFLCNRAITVSYAFKR 180
>U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA
binding protein protein.
Length = 398
Score = 41.9 bits (94), Expect = 3e-04
Identities = 28/93 (30%), Positives = 47/93 (50%), Gaps = 8/93 (8%)
Frame = +1
Query: 226 IFIGNLSDKTTEADLRPLFEKYGTVVECDIVRN--------YGFVHMENEQVGREAIQNL 381
I++G L +K +E+ L L + G VV ++ ++ +GFV E+ AI+ L
Sbjct: 25 IYVGGLDEKVSESILWELMVQAGPVVSVNMPKDRVTANHQGFGFVEFMGEEDADYAIKIL 84
Query: 382 NGELVHGQAIKIEAAKSRKAPSTPTTKIFVGNL 480
N ++G+ IK+ A + + IFVGNL
Sbjct: 85 NMIKLYGKPIKVNKASAHEKNMDVGANIFVGNL 117
Score = 30.3 bits (65), Expect = 0.85
Identities = 18/79 (22%), Positives = 36/79 (45%), Gaps = 9/79 (11%)
Frame = +1
Query: 226 IFIGNLSDKTTEADLRPLFEKYGTV---------VECDIVRNYGFVHMENEQVGREAIQN 378
IF+GNL + E L F +G + V+ + + F++ + + A++
Sbjct: 112 IFVGNLDPEVDEKLLYDTFSAFGVILQVPKIMRDVDSGTSKGFAFINFASFEASDTALEA 171
Query: 379 LNGELVHGQAIKIEAAKSR 435
+NG+ + +AI + A R
Sbjct: 172 MNGQFLCNRAITVSYAFKR 190
>Z92826-4|CAB07322.1| 309|Caenorhabditis elegans Hypothetical
protein C18D11.4 protein.
Length = 309
Score = 40.3 bits (90), Expect = 8e-04
Identities = 25/88 (28%), Positives = 46/88 (52%), Gaps = 8/88 (9%)
Frame = +1
Query: 238 NLSDKTTEADLRPLFEKYGTVVECDIV--------RNYGFVHMENEQVGREAIQNLNGEL 393
NLS TTE DLR +F ++G + +CD+V R +GF++ + A L
Sbjct: 82 NLSSYTTEKDLRDVFGEFGEINKCDLVYDRPSGNSRGFGFIYFNLIEDATAARDKLCNTD 141
Query: 394 VHGQAIKIEAAKSRKAPSTPTTKIFVGN 477
+ G I+++ + +++ S PT ++G+
Sbjct: 142 LDGHKIRVDFSLTKRGHS-PTPGQYMGD 168
>AL132904-14|CAC35847.2| 258|Caenorhabditis elegans Hypothetical
protein Y111B2A.18 protein.
Length = 258
Score = 40.3 bits (90), Expect = 8e-04
Identities = 21/75 (28%), Positives = 38/75 (50%), Gaps = 4/75 (5%)
Frame = +1
Query: 208 GTGTFKIFIGNLSDKTTEADLRPLFEKYGTVVECDIVRNYG----FVHMENEQVGREAIQ 375
G+ K+++GNL E ++ +F KYG + DI G FV E+ + +A++
Sbjct: 5 GSEDQKVYVGNLPGDVREKEVEDIFHKYGRIKYVDIKSGRGPAFAFVEFEDHRDAEDAVR 64
Query: 376 NLNGELVHGQAIKIE 420
+G G+ I++E
Sbjct: 65 ARDGYEFDGRRIRVE 79
>AF242767-1|AAG36874.1| 258|Caenorhabditis elegans SF2 protein.
Length = 258
Score = 40.3 bits (90), Expect = 8e-04
Identities = 21/75 (28%), Positives = 38/75 (50%), Gaps = 4/75 (5%)
Frame = +1
Query: 208 GTGTFKIFIGNLSDKTTEADLRPLFEKYGTVVECDIVRNYG----FVHMENEQVGREAIQ 375
G+ K+++GNL E ++ +F KYG + DI G FV E+ + +A++
Sbjct: 5 GSEDQKVYVGNLPGDVREKEVEDIFHKYGRIKYVDIKSGRGPAFAFVEFEDHRDAEDAVR 64
Query: 376 NLNGELVHGQAIKIE 420
+G G+ I++E
Sbjct: 65 ARDGYEFDGRRIRVE 79
>Z50110-2|CAA90446.1| 566|Caenorhabditis elegans Hypothetical
protein F18H3.3b protein.
Length = 566
Score = 39.9 bits (89), Expect = 0.001
Identities = 21/75 (28%), Positives = 34/75 (45%), Gaps = 7/75 (9%)
Frame = +1
Query: 214 GTFKIFIGNLSDKTTEADLRPLFEKYGTVVECDIV-------RNYGFVHMENEQVGREAI 372
G IFI NL + F +G ++ C + + YGFVH E E + AI
Sbjct: 143 GNGNIFIKNLDRVIDNKSVYDTFSLFGNILSCKVATDDEGNSKGYGFVHFETEHSAQTAI 202
Query: 373 QNLNGELVHGQAIKI 417
+ +NG L+ + + +
Sbjct: 203 EKVNGMLLSDKKVYV 217
Score = 35.9 bits (79), Expect = 0.017
Identities = 15/78 (19%), Positives = 37/78 (47%), Gaps = 7/78 (8%)
Frame = +1
Query: 226 IFIGNLSDKTTEADLRPLFEKYGTVVECDIV-------RNYGFVHMENEQVGREAIQNLN 384
+F+ N + + L +F K+G + ++ + +GFV ++ +A++ LN
Sbjct: 240 VFVKNFGEHLDQEKLSAMFSKFGEITSAVVMTDAQGKPKGFGFVAFADQDAAGQAVEKLN 299
Query: 385 GELVHGQAIKIEAAKSRK 438
++ G K+ +++K
Sbjct: 300 DSILEGTDCKLSVCRAQK 317
>Z50110-1|CAA90444.1| 692|Caenorhabditis elegans Hypothetical
protein F18H3.3a protein.
Length = 692
Score = 39.9 bits (89), Expect = 0.001
Identities = 21/75 (28%), Positives = 34/75 (45%), Gaps = 7/75 (9%)
Frame = +1
Query: 214 GTFKIFIGNLSDKTTEADLRPLFEKYGTVVECDIV-------RNYGFVHMENEQVGREAI 372
G IFI NL + F +G ++ C + + YGFVH E E + AI
Sbjct: 143 GNGNIFIKNLDRVIDNKSVYDTFSLFGNILSCKVATDDEGNSKGYGFVHFETEHSAQTAI 202
Query: 373 QNLNGELVHGQAIKI 417
+ +NG L+ + + +
Sbjct: 203 EKVNGMLLSDKKVYV 217
Score = 35.9 bits (79), Expect = 0.017
Identities = 15/78 (19%), Positives = 37/78 (47%), Gaps = 7/78 (8%)
Frame = +1
Query: 226 IFIGNLSDKTTEADLRPLFEKYGTVVECDIV-------RNYGFVHMENEQVGREAIQNLN 384
+F+ N + + L +F K+G + ++ + +GFV ++ +A++ LN
Sbjct: 240 VFVKNFGEHLDQEKLSAMFSKFGEITSAVVMTDAQGKPKGFGFVAFADQDAAGQAVEKLN 299
Query: 385 GELVHGQAIKIEAAKSRK 438
++ G K+ +++K
Sbjct: 300 DSILEGTDCKLSVCRAQK 317
>Z81108-1|CAB03236.1| 83|Caenorhabditis elegans Hypothetical
protein R09B3.2 protein.
Length = 83
Score = 39.5 bits (88), Expect = 0.001
Identities = 20/80 (25%), Positives = 39/80 (48%), Gaps = 8/80 (10%)
Frame = +1
Query: 211 TGTFKIFIGNLSDKTTEADLRPLFEKYGTV----VECD----IVRNYGFVHMENEQVGRE 366
+G F +++GN +TTE +L F G + + CD R + F+ E +
Sbjct: 2 SGIFSVYVGNAPFQTTEEELGNFFSSIGQINNVRIVCDRETGRPRGFAFIEFAEEGSAQR 61
Query: 367 AIQNLNGELVHGQAIKIEAA 426
A++ +NG +G+ +++ A
Sbjct: 62 AVEQMNGAEFNGRPLRVNLA 81
>U23450-2|AAK31468.1| 302|Caenorhabditis elegans Hypothetical
protein C30B5.4 protein.
Length = 302
Score = 39.5 bits (88), Expect = 0.001
Identities = 21/81 (25%), Positives = 44/81 (54%), Gaps = 8/81 (9%)
Frame = +1
Query: 226 IFIGNLSDKTTEADLRPLFEKYGTVVECDIVRN--------YGFVHMENEQVGREAIQNL 381
I+IG LS +E D+ +F +YG V+ +++R+ + F+ ++++ A+ N
Sbjct: 40 IYIGGLSYALSEGDVIAVFSQYGEVMNINLIRDKDTGKSKGFAFLCYKDQRSTILAVDNF 99
Query: 382 NGELVHGQAIKIEAAKSRKAP 444
NG +H + I+++ + K P
Sbjct: 100 NGISLHKRMIRVDHVEEYKVP 120
>Z36752-6|CAA85327.1| 456|Caenorhabditis elegans Hypothetical
protein F35H8.5 protein.
Length = 456
Score = 39.1 bits (87), Expect = 0.002
Identities = 23/76 (30%), Positives = 39/76 (51%), Gaps = 7/76 (9%)
Frame = +1
Query: 211 TGTFKIFIGNLSDKTTEADLRPLFEKYGTVVECDIVRN-------YGFVHMENEQVGREA 369
T + +F+ NLS T + L LF ++G +V I+R+ Y FV M N A
Sbjct: 371 TAGYCLFVYNLSSDTDDTLLWQLFSQFGAIVNVKILRDLTQQCKGYAFVSMSNYTEAYNA 430
Query: 370 IQNLNGELVHGQAIKI 417
+ +LNG + G+ +++
Sbjct: 431 MLSLNGTNLAGKTLQV 446
Score = 37.9 bits (84), Expect = 0.004
Identities = 22/82 (26%), Positives = 37/82 (45%), Gaps = 8/82 (9%)
Frame = +1
Query: 208 GTGTFKIFIGNLSDKTTEADLRPLFEKYGTVVECDIVRN--------YGFVHMENEQVGR 363
G + I L T+ ++R LF G + C +VR+ YGFV+ E+
Sbjct: 38 GESKTNLIINYLPQGMTQEEVRSLFTSIGEIESCKLVRDKVTGQSLGYGFVNYVREEDAL 97
Query: 364 EAIQNLNGELVHGQAIKIEAAK 429
A+ + NG + + IK+ A+
Sbjct: 98 RAVSSFNGLRLQNKTIKVSYAR 119
>AL110485-8|CAB60356.1| 434|Caenorhabditis elegans Hypothetical
protein Y46G5A.13 protein.
Length = 434
Score = 39.1 bits (87), Expect = 0.002
Identities = 24/83 (28%), Positives = 38/83 (45%), Gaps = 8/83 (9%)
Frame = +1
Query: 190 SESKMPGTGTFKIFIGNLSDKTTEADLRPLFEKYGTVVECDIVRN--------YGFVHME 345
+ SK + F +F+G+L + LR F K+G V E I+R+ YGFV
Sbjct: 122 NRSKPETSRHFHVFVGDLCSEIDSTKLREAFVKFGEVSEAKIIRDNNTNKGKGYGFVSYP 181
Query: 346 NEQVGREAIQNLNGELVHGQAIK 414
+ AI +NG + + I+
Sbjct: 182 RREDAERAIDEMNGAWLGRRTIR 204
>Z97628-2|CAB10726.2| 427|Caenorhabditis elegans Hypothetical
protein F39H2.2a protein.
Length = 427
Score = 38.7 bits (86), Expect = 0.002
Identities = 19/77 (24%), Positives = 41/77 (53%), Gaps = 8/77 (10%)
Frame = +1
Query: 226 IFIGNLSDKTTEADLRPLFEKYGTVVECDIVRN--------YGFVHMENEQVGREAIQNL 381
+F+ L+ TT+ DL +F ++G + C+IVR+ Y F+ +N + +A +
Sbjct: 243 LFVCKLNPVTTDEDLEIIFSRFGKINNCEIVRDRRSGDSLQYAFIEFDNAKSCEQAFFKM 302
Query: 382 NGELVHGQAIKIEAAKS 432
+ L+ + I ++ ++S
Sbjct: 303 DNVLIDDRRIHVDFSQS 319
>Z81080-5|CAB03088.2| 427|Caenorhabditis elegans Hypothetical
protein F39H2.2a protein.
Length = 427
Score = 38.7 bits (86), Expect = 0.002
Identities = 19/77 (24%), Positives = 41/77 (53%), Gaps = 8/77 (10%)
Frame = +1
Query: 226 IFIGNLSDKTTEADLRPLFEKYGTVVECDIVRN--------YGFVHMENEQVGREAIQNL 381
+F+ L+ TT+ DL +F ++G + C+IVR+ Y F+ +N + +A +
Sbjct: 243 LFVCKLNPVTTDEDLEIIFSRFGKINNCEIVRDRRSGDSLQYAFIEFDNAKSCEQAFFKM 302
Query: 382 NGELVHGQAIKIEAAKS 432
+ L+ + I ++ ++S
Sbjct: 303 DNVLIDDRRIHVDFSQS 319
>Z81080-2|CAD56584.1| 358|Caenorhabditis elegans Hypothetical
protein F39H2.2b protein.
Length = 358
Score = 38.7 bits (86), Expect = 0.002
Identities = 19/77 (24%), Positives = 41/77 (53%), Gaps = 8/77 (10%)
Frame = +1
Query: 226 IFIGNLSDKTTEADLRPLFEKYGTVVECDIVRN--------YGFVHMENEQVGREAIQNL 381
+F+ L+ TT+ DL +F ++G + C+IVR+ Y F+ +N + +A +
Sbjct: 174 LFVCKLNPVTTDEDLEIIFSRFGKINNCEIVRDRRSGDSLQYAFIEFDNAKSCEQAFFKM 233
Query: 382 NGELVHGQAIKIEAAKS 432
+ L+ + I ++ ++S
Sbjct: 234 DNVLIDDRRIHVDFSQS 250
>Z35601-1|CAA84667.2| 320|Caenorhabditis elegans Hypothetical
protein R10E9.1 protein.
Length = 320
Score = 38.3 bits (85), Expect = 0.003
Identities = 22/84 (26%), Positives = 47/84 (55%), Gaps = 8/84 (9%)
Frame = +1
Query: 211 TGTFKIFIGNLSDKTTEADLRPLFEKYGTVVECDIV--------RNYGFVHMENEQVGRE 366
T T K+FIG LS +T D++ FE YG V + ++ R +GFV ++++V +
Sbjct: 131 TKTKKVFIGGLSATSTLEDMKQYFETYGKVEDAMLMFDKATQRHRGFGFVTFDSDEVA-D 189
Query: 367 AIQNLNGELVHGQAIKIEAAKSRK 438
+ ++ ++G+ ++ + A+ ++
Sbjct: 190 KVCEIHFHEINGKMVECKKAQPKE 213
>AC024791-22|AAF60676.1| 339|Caenorhabditis elegans Rnp (rrm rna
binding domain) containingprotein 6, isoform a protein.
Length = 339
Score = 38.3 bits (85), Expect = 0.003
Identities = 18/74 (24%), Positives = 39/74 (52%), Gaps = 8/74 (10%)
Frame = +1
Query: 220 FKIFIGNLSDKTTEADLRPLFEKYGTVVECDIV--------RNYGFVHMENEQVGREAIQ 375
F++++ ++ +E DL+ +FE +G +V+C + R +G++ N EAI
Sbjct: 207 FRVYVSSVHPDLSETDLKSVFEAFGEIVKCQLARAPTGRGHRGFGYLEFNNLTSQSEAIA 266
Query: 376 NLNGELVHGQAIKI 417
+N + GQ +++
Sbjct: 267 GMNMFDLGGQYLRV 280
>AC024791-21|AAF60666.1| 749|Caenorhabditis elegans Rnp (rrm rna
binding domain) containingprotein 6, isoform b protein.
Length = 749
Score = 38.3 bits (85), Expect = 0.003
Identities = 18/74 (24%), Positives = 39/74 (52%), Gaps = 8/74 (10%)
Frame = +1
Query: 220 FKIFIGNLSDKTTEADLRPLFEKYGTVVECDIV--------RNYGFVHMENEQVGREAIQ 375
F++++ ++ +E DL+ +FE +G +V+C + R +G++ N EAI
Sbjct: 207 FRVYVSSVHPDLSETDLKSVFEAFGEIVKCQLARAPTGRGHRGFGYLEFNNLTSQSEAIA 266
Query: 376 NLNGELVHGQAIKI 417
+N + GQ +++
Sbjct: 267 GMNMFDLGGQYLRV 280
>AB036738-1|BAB13470.1| 320|Caenorhabditis elegans neural
RNA-binding protein MSI-1 protein.
Length = 320
Score = 38.3 bits (85), Expect = 0.003
Identities = 22/84 (26%), Positives = 47/84 (55%), Gaps = 8/84 (9%)
Frame = +1
Query: 211 TGTFKIFIGNLSDKTTEADLRPLFEKYGTVVECDIV--------RNYGFVHMENEQVGRE 366
T T K+FIG LS +T D++ FE YG V + ++ R +GFV ++++V +
Sbjct: 131 TKTKKVFIGGLSATSTLEDMKQYFETYGKVEDAMLMFDKATQRHRGFGFVTFDSDEVA-D 189
Query: 367 AIQNLNGELVHGQAIKIEAAKSRK 438
+ ++ ++G+ ++ + A+ ++
Sbjct: 190 KVCEIHFHEINGKMVECKKAQPKE 213
>AC084197-11|AAM44397.1| 305|Caenorhabditis elegans Homologous to
drosophila sqd (squid)protein protein 1, isoform a
protein.
Length = 305
Score = 37.9 bits (84), Expect = 0.004
Identities = 27/103 (26%), Positives = 48/103 (46%), Gaps = 7/103 (6%)
Frame = +1
Query: 223 KIFIGNLSDKTTEADLRPLFEKYGTVVECDIV------RNYGFVHME-NEQVGREAIQNL 381
KIF+G +S + DL F +YG V + + R+ GF +E G +
Sbjct: 30 KIFVGGISPEVNNEDLSSHFTQYGEVAQAQVKYDRTNGRSRGFAFVEFTTGEGCKLALAA 89
Query: 382 NGELVHGQAIKIEAAKSRKAPSTPTTKIFVGNLTDKTRAPEVR 510
+ + G++++++ AKSR+ K+FVG L ++R
Sbjct: 90 REQTIKGKSVEVKPAKSRE-----NKKVFVGGLPSDYSEQDLR 127
Score = 31.1 bits (67), Expect = 0.49
Identities = 18/57 (31%), Positives = 29/57 (50%), Gaps = 8/57 (14%)
Frame = +1
Query: 223 KIFIGNLSDKTTEADLRPLFEKYGTVVECD--------IVRNYGFVHMENEQVGREA 369
K+F+G L +E DLR FE++G V + + RN+ F+ E E+ +A
Sbjct: 111 KVFVGGLPSDYSEQDLRSHFEQFGKVDDIEWPFDKQTKARRNFAFIVFEEEESADKA 167
>AC084197-10|AAY43984.1| 308|Caenorhabditis elegans Homologous to
drosophila sqd (squid)protein protein 1, isoform b
protein.
Length = 308
Score = 37.9 bits (84), Expect = 0.004
Identities = 27/103 (26%), Positives = 48/103 (46%), Gaps = 7/103 (6%)
Frame = +1
Query: 223 KIFIGNLSDKTTEADLRPLFEKYGTVVECDIV------RNYGFVHME-NEQVGREAIQNL 381
KIF+G +S + DL F +YG V + + R+ GF +E G +
Sbjct: 30 KIFVGGISPEVNNEDLSSHFTQYGEVAQAQVKYDRTNGRSRGFAFVEFTTGEGCKLALAA 89
Query: 382 NGELVHGQAIKIEAAKSRKAPSTPTTKIFVGNLTDKTRAPEVR 510
+ + G++++++ AKSR+ K+FVG L ++R
Sbjct: 90 REQTIKGKSVEVKPAKSRE-----NKKVFVGGLPSDYSEQDLR 127
Score = 31.1 bits (67), Expect = 0.49
Identities = 18/57 (31%), Positives = 29/57 (50%), Gaps = 8/57 (14%)
Frame = +1
Query: 223 KIFIGNLSDKTTEADLRPLFEKYGTVVECD--------IVRNYGFVHMENEQVGREA 369
K+F+G L +E DLR FE++G V + + RN+ F+ E E+ +A
Sbjct: 111 KVFVGGLPSDYSEQDLRSHFEQFGKVDDIEWPFDKQTKARRNFAFIVFEEEESADKA 167
>U00052-10|AAK21429.2| 289|Caenorhabditis elegans Rnp (rrm rna
binding domain) containingprotein 5 protein.
Length = 289
Score = 37.5 bits (83), Expect = 0.006
Identities = 20/82 (24%), Positives = 40/82 (48%), Gaps = 9/82 (10%)
Frame = +1
Query: 223 KIFIGNLSDKTTEADLRPLFEKYGTVVECDIV---------RNYGFVHMENEQVGREAIQ 375
++ I NLS + L +F YG + D+ R YG+V +N + ++I+
Sbjct: 134 RVVIKNLSRNVLKTHLEEIFSIYGAIKNVDLPPDRFHNHVHRGYGYVEYDNLEDAEKSIK 193
Query: 376 NLNGELVHGQAIKIEAAKSRKA 441
+++G + G A+ +E R++
Sbjct: 194 HMDGGQIDGMAVHVEMTIGRQS 215
>U23172-14|AAL02495.1| 165|Caenorhabditis elegans Hypothetical
protein F25B5.7b protein.
Length = 165
Score = 37.1 bits (82), Expect = 0.007
Identities = 13/33 (39%), Positives = 22/33 (66%)
Frame = +1
Query: 211 TGTFKIFIGNLSDKTTEADLRPLFEKYGTVVEC 309
TG ++F+GNL ++ E +L+ LF +G + EC
Sbjct: 113 TGRCRLFVGNLPNEVKETELKELFSPHGDIAEC 145
>AC024791-23|AAM81102.1| 346|Caenorhabditis elegans Rnp (rrm rna
binding domain) containingprotein 6, isoform c protein.
Length = 346
Score = 37.1 bits (82), Expect = 0.007
Identities = 18/73 (24%), Positives = 38/73 (52%), Gaps = 8/73 (10%)
Frame = +1
Query: 220 FKIFIGNLSDKTTEADLRPLFEKYGTVVECDIV--------RNYGFVHMENEQVGREAIQ 375
F++++ ++ +E DL+ +FE +G +V+C + R +G++ N EAI
Sbjct: 207 FRVYVSSVHPDLSETDLKSVFEAFGEIVKCQLARAPTGRGHRGFGYLEFNNLTSQSEAIA 266
Query: 376 NLNGELVHGQAIK 414
+N + GQ ++
Sbjct: 267 GMNMFDLGGQYLR 279
>Z36238-4|CAD82915.1| 286|Caenorhabditis elegans Hypothetical
protein R74.5b protein.
Length = 286
Score = 35.9 bits (79), Expect = 0.017
Identities = 19/59 (32%), Positives = 30/59 (50%), Gaps = 6/59 (10%)
Frame = +1
Query: 277 LFEKYGTVVECDIVRN------YGFVHMENEQVGREAIQNLNGELVHGQAIKIEAAKSR 435
+FEK G VV+ +I+ N +GFV M+N A NG + G+ +++ A R
Sbjct: 1 MFEKVGPVVDVEIIFNERGSKGFGFVTMQNPDDADRARAEFNGTTIEGRRVEVNLATQR 59
>AF047662-1|AAC04442.1| 248|Caenorhabditis elegans Suppressor
protein 12 protein.
Length = 248
Score = 35.9 bits (79), Expect = 0.017
Identities = 23/84 (27%), Positives = 39/84 (46%), Gaps = 8/84 (9%)
Frame = +1
Query: 223 KIFIGNLSDKTTEADLRPLFEKYGTVVECDIV--------RNYGFVHMENEQVGREAIQN 378
KIF+G L T++ L FE++G + E ++ R YGFV M++ A ++
Sbjct: 36 KIFVGGLPYHTSDKTLHEYFEQFGDIEEAVVITDRNTQKSRGYGFVTMKDRASAERACKD 95
Query: 379 LNGELVHGQAIKIEAAKSRKAPST 450
N ++ G+ + A P T
Sbjct: 96 PN-PIIDGRKANVNLAYLGAKPRT 118
>AL117204-22|CAB55151.1| 331|Caenorhabditis elegans Hypothetical
protein Y116A8C.34 protein.
Length = 331
Score = 35.5 bits (78), Expect = 0.023
Identities = 22/80 (27%), Positives = 37/80 (46%), Gaps = 8/80 (10%)
Frame = +1
Query: 226 IFIGNLSDKTTEADLRPLFEKYGTVVECDIV--------RNYGFVHMENEQVGREAIQNL 381
+++G ++ TE L F +G VV I R +GFV + + AI N+
Sbjct: 13 LYVGGFTEDVTEKVLMAAFIPFGDVVAISIPMDYESGKHRGFGFVEFDMAEDAAMAIDNM 72
Query: 382 NGELVHGQAIKIEAAKSRKA 441
N + G+ I++ A+ KA
Sbjct: 73 NESELFGKTIRVNFARPPKA 92
>Z32683-11|CAA83626.1| 142|Caenorhabditis elegans Hypothetical
protein R07E5.14 protein.
Length = 142
Score = 35.1 bits (77), Expect = 0.030
Identities = 18/73 (24%), Positives = 35/73 (47%), Gaps = 8/73 (10%)
Frame = +1
Query: 226 IFIGNLSDKTTEADLRPLFEKYGTVVECDI--------VRNYGFVHMENEQVGREAIQNL 381
+F+ N+ ++ TE D+ F +YG + + ++ Y V E ++ EAI
Sbjct: 57 VFVTNIHEEATEDDVHDKFSEYGKIKNIHLNLDRRTGFLKGYALVEYETQKEANEAIDQS 116
Query: 382 NGELVHGQAIKIE 420
N + GQ +K++
Sbjct: 117 NDTDLLGQNVKVD 129
>U39997-3|AAK68389.1| 498|Caenorhabditis elegans Human daz (deleted
in azoospermia)homolog protein 1 protein.
Length = 498
Score = 35.1 bits (77), Expect = 0.030
Identities = 19/55 (34%), Positives = 28/55 (50%), Gaps = 7/55 (12%)
Frame = +1
Query: 223 KIFIGNLSDKTTEADLRPLFEKYGTVVECDIVRN-------YGFVHMENEQVGRE 366
+IF+G TTE +LR FEK+ V + +V++ YGF+ E E E
Sbjct: 67 RIFVGGFPTSTTETELREHFEKFFAVKDVKMVKSLDGQSKGYGFITFETEDQAEE 121
>AB025253-1|BAA88577.1| 499|Caenorhabditis elegans DAZ-1 protein.
Length = 499
Score = 35.1 bits (77), Expect = 0.030
Identities = 19/55 (34%), Positives = 28/55 (50%), Gaps = 7/55 (12%)
Frame = +1
Query: 223 KIFIGNLSDKTTEADLRPLFEKYGTVVECDIVRN-------YGFVHMENEQVGRE 366
+IF+G TTE +LR FEK+ V + +V++ YGF+ E E E
Sbjct: 68 RIFVGGFPTSTTETELREHFEKFFAVKDVKMVKSLDGQSKGYGFITFETEDQAEE 122
>U21320-5|AAA62536.2| 332|Caenorhabditis elegans Rnp (rrm rna
binding domain) containingprotein 7 protein.
Length = 332
Score = 34.3 bits (75), Expect = 0.052
Identities = 19/77 (24%), Positives = 39/77 (50%), Gaps = 7/77 (9%)
Frame = +1
Query: 226 IFIGNLSDKTTEADLRPLFEKYGTVVECDIV-------RNYGFVHMENEQVGREAIQNLN 384
+F+G ++ +T+E+ LR FE YG + + +V R Y F+ ++ A + +
Sbjct: 106 LFVGRINYETSESKLRREFEAYGKIKKLTMVHDEAGKPRGYAFIEYSDKAEMHTAYKKAD 165
Query: 385 GELVHGQAIKIEAAKSR 435
G V G+ + ++ + R
Sbjct: 166 GIKVDGKRLVVDYERGR 182
>Z73102-13|CAA97405.1| 836|Caenorhabditis elegans Hypothetical
protein B0035.12 protein.
Length = 836
Score = 33.9 bits (74), Expect = 0.069
Identities = 32/117 (27%), Positives = 56/117 (47%), Gaps = 13/117 (11%)
Frame = +1
Query: 205 PGTGTFK-IFIGNLSDKTTEADLRPLFE-----KYGTVVECDIV-RNYGFVHMENEQVGR 363
PGT + IF+ NL TTE ++R E ++ D+V R + +V MEN+Q +
Sbjct: 587 PGTEDARTIFVSNLDFTTTEDEIRQAIEGVASIRFARKANSDLVHRGFAYVVMENDQKAQ 646
Query: 364 EAIQNLNGELVHGQAIKIEAAKSRK------APSTPTTKIFVGNLTDKTRAPEVREL 516
+A+ + V G+ + I A K + + +K+FV N+ + E++ L
Sbjct: 647 QALLK-DRVPVKGRPMFISANDPEKRVGFKFSTTLEKSKVFVRNVHFQATDDELKAL 702
Score = 29.9 bits (64), Expect = 1.1
Identities = 11/26 (42%), Positives = 19/26 (73%)
Frame = +1
Query: 223 KIFIGNLSDKTTEADLRPLFEKYGTV 300
K+F+ N+ + T+ +L+ LF K+GTV
Sbjct: 684 KVFVRNVHFQATDDELKALFSKFGTV 709
>Z81473-3|CAB03896.4| 514|Caenorhabditis elegans Hypothetical
protein C17D12.2 protein.
Length = 514
Score = 33.5 bits (73), Expect = 0.092
Identities = 26/114 (22%), Positives = 53/114 (46%), Gaps = 16/114 (14%)
Frame = +1
Query: 223 KIFIGNLSDKTTEADLRPLFEKYGTVVECDIVRN-----------YGFVHMENEQVGREA 369
K+F+G + E DLR LFE++G + E I+++ + H ++ +
Sbjct: 30 KLFVGQIPRNLEEKDLRHLFEQFGKIYEFTILKDKYTGMHKGCAFLTYCHRDSAVRCQAT 89
Query: 370 IQNLNGELVHGQAIKIEAAKSRKAPSTP-----TTKIFVGNLTDKTRAPEVREL 516
+ + +A++++ A + P++P K+F+G L+ + EVR L
Sbjct: 90 LHDQKTLPGMNRAMQVKPADTDSRPASPKDKMDDKKLFIGMLSKQQSEDEVRAL 143
Score = 29.5 bits (63), Expect = 1.5
Identities = 20/91 (21%), Positives = 43/91 (47%), Gaps = 8/91 (8%)
Frame = +1
Query: 187 VSESKMPGTGTFKIFIGNLSDKTTEADLRPLFEKYGTVVECDIV--------RNYGFVHM 342
V+ ++ G +FI +L + +A+L +F +G +V + + +GFV
Sbjct: 418 VTPREVLGPDGCNLFIYHLPQEFGDAELIQMFAPFGHIVSAKVFVDRATNQSKCFGFVSY 477
Query: 343 ENEQVGREAIQNLNGELVHGQAIKIEAAKSR 435
+N + AI +NG + + +K++ + R
Sbjct: 478 DNIHSSQAAITAMNGFQIGMKRLKVQLKRPR 508
>AY342388-1|AAQ19851.1| 514|Caenorhabditis elegans putative
RNA-binding protein protein.
Length = 514
Score = 33.5 bits (73), Expect = 0.092
Identities = 26/114 (22%), Positives = 53/114 (46%), Gaps = 16/114 (14%)
Frame = +1
Query: 223 KIFIGNLSDKTTEADLRPLFEKYGTVVECDIVRN-----------YGFVHMENEQVGREA 369
K+F+G + E DLR LFE++G + E I+++ + H ++ +
Sbjct: 30 KLFVGQIPRNLEEKDLRHLFEQFGKIYEFTILKDKYTGMHKGCAFLTYCHRDSAVRCQAT 89
Query: 370 IQNLNGELVHGQAIKIEAAKSRKAPSTP-----TTKIFVGNLTDKTRAPEVREL 516
+ + +A++++ A + P++P K+F+G L+ + EVR L
Sbjct: 90 LHDQKTLPGMNRAMQVKPADTDSRPASPKDKMDDKKLFIGMLSKQQSEDEVRAL 143
Score = 29.5 bits (63), Expect = 1.5
Identities = 20/91 (21%), Positives = 43/91 (47%), Gaps = 8/91 (8%)
Frame = +1
Query: 187 VSESKMPGTGTFKIFIGNLSDKTTEADLRPLFEKYGTVVECDIV--------RNYGFVHM 342
V+ ++ G +FI +L + +A+L +F +G +V + + +GFV
Sbjct: 418 VTPREVLGPDGCNLFIYHLPQEFGDAELIQMFAPFGHIVSAKVFVDRATNQSKCFGFVSY 477
Query: 343 ENEQVGREAIQNLNGELVHGQAIKIEAAKSR 435
+N + AI +NG + + +K++ + R
Sbjct: 478 DNIHSSQAAITAMNGFQIGMKRLKVQLKRPR 508
>AF098501-6|AAL38960.1| 315|Caenorhabditis elegans Hypothetical
protein H28G03.1b protein.
Length = 315
Score = 33.5 bits (73), Expect = 0.092
Identities = 15/39 (38%), Positives = 23/39 (58%)
Frame = +1
Query: 223 KIFIGNLSDKTTEADLRPLFEKYGTVVECDIVRNYGFVH 339
K+FIG LS TT+ L F ++G VV+ ++R+ H
Sbjct: 50 KLFIGGLSHDTTDEQLGNYFSQWGPVVDAIVIRDPNTKH 88
>AF098501-5|AAM69104.1| 335|Caenorhabditis elegans Hypothetical
protein H28G03.1c protein.
Length = 335
Score = 33.5 bits (73), Expect = 0.092
Identities = 15/39 (38%), Positives = 23/39 (58%)
Frame = +1
Query: 223 KIFIGNLSDKTTEADLRPLFEKYGTVVECDIVRNYGFVH 339
K+FIG LS TT+ L F ++G VV+ ++R+ H
Sbjct: 70 KLFIGGLSHDTTDEQLGNYFSQWGPVVDAIVIRDPNTKH 108
>AF098501-4|AAL38959.1| 336|Caenorhabditis elegans Hypothetical
protein H28G03.1a protein.
Length = 336
Score = 33.5 bits (73), Expect = 0.092
Identities = 15/39 (38%), Positives = 23/39 (58%)
Frame = +1
Query: 223 KIFIGNLSDKTTEADLRPLFEKYGTVVECDIVRNYGFVH 339
K+FIG LS TT+ L F ++G VV+ ++R+ H
Sbjct: 71 KLFIGGLSHDTTDEQLGNYFSQWGPVVDAIVIRDPNTKH 109
>AC024818-2|AAF60781.1| 302|Caenorhabditis elegans Temporarily
assigned gene nameprotein 262 protein.
Length = 302
Score = 33.5 bits (73), Expect = 0.092
Identities = 19/74 (25%), Positives = 38/74 (51%), Gaps = 8/74 (10%)
Frame = +1
Query: 220 FKIFIGNLSDKTTEADLRPLFEKYGTVVECDIVR--------NYGFVHMENEQVGREAIQ 375
F++F G+L ++ ++ L F KY + + +VR YGFV + + A++
Sbjct: 203 FRVFCGDLGNEVSDELLAKAFRKYPSFQKAKVVRESRTNKSKGYGFVSFRDSEDYVRAMR 262
Query: 376 NLNGELVHGQAIKI 417
++G+ V + IK+
Sbjct: 263 EMDGKYVGNRPIKL 276
>Z83127-4|CAB05631.1| 872|Caenorhabditis elegans Hypothetical
protein T23F6.4 protein.
Length = 872
Score = 33.1 bits (72), Expect = 0.12
Identities = 16/34 (47%), Positives = 22/34 (64%)
Frame = +1
Query: 217 TFKIFIGNLSDKTTEADLRPLFEKYGTVVECDIV 318
T ++F+ NL T E DL+ LF+KYG V E +V
Sbjct: 278 TGRLFLRNLPYATKEDDLQFLFKKYGEVSEVQVV 311
Score = 32.7 bits (71), Expect = 0.16
Identities = 19/78 (24%), Positives = 33/78 (42%), Gaps = 7/78 (8%)
Frame = +1
Query: 217 TFKIFIGNLSDKTTEADLRPLFEKYGTVVECDI-------VRNYGFVHMENEQVGREAIQ 375
T ++ + NL TE LR FEKYG + + + R + FV +E A+
Sbjct: 2 TTRLIVKNLPSTCTEQQLRKFFEKYGQISDASLKYTKEGKFRGFAFVGFLDEGSASNALA 61
Query: 376 NLNGELVHGQAIKIEAAK 429
N + + + +E +
Sbjct: 62 KSNQTFFNSKKLTVEECR 79
>U80455-2|AAB37882.2| 420|Caenorhabditis elegans Elav-type rna
binding protein familyprotein 1, isoform b protein.
Length = 420
Score = 33.1 bits (72), Expect = 0.12
Identities = 25/94 (26%), Positives = 40/94 (42%), Gaps = 8/94 (8%)
Frame = +1
Query: 187 VSESKMPGTGTFKIFIGNLSDKTTEADLRPLFEKYGTVVEC----DIVRN----YGFVHM 342
V + G +FI +L ++DL F +G ++ D V N +GFV
Sbjct: 324 VGNGDVKGPDGANLFIYHLPQDFGDSDLINTFAPFGGILSAKVFIDKVTNLSKCFGFVSY 383
Query: 343 ENEQVGREAIQNLNGELVHGQAIKIEAAKSRKAP 444
EN Q AI +NG + + +K++ R P
Sbjct: 384 ENAQSATNAISAMNGFQIGSKRLKVQLKVDRGNP 417
>U23484-7|ABB88232.1| 738|Caenorhabditis elegans Hypothetical
protein EEED8.10a protein.
Length = 738
Score = 32.7 bits (71), Expect = 0.16
Identities = 12/33 (36%), Positives = 20/33 (60%)
Frame = +1
Query: 223 KIFIGNLSDKTTEADLRPLFEKYGTVVECDIVR 321
KI + N+S K T++ L+ F +YG + C + R
Sbjct: 113 KIVVSNISAKVTQSQLQSFFSQYGKITSCILPR 145
>AF067616-7|AAM98029.1| 423|Caenorhabditis elegans Hypothetical
protein F29C4.7b protein.
Length = 423
Score = 32.3 bits (70), Expect = 0.21
Identities = 13/33 (39%), Positives = 21/33 (63%)
Frame = +1
Query: 217 TFKIFIGNLSDKTTEADLRPLFEKYGTVVECDI 315
T +F+GN+ E ++R +FE++G V E DI
Sbjct: 168 TRTLFVGNMPSDVKEREIRHVFEEHGKVEEVDI 200
>AF067616-6|AAC19192.1| 520|Caenorhabditis elegans Hypothetical
protein F29C4.7a protein.
Length = 520
Score = 32.3 bits (70), Expect = 0.21
Identities = 13/33 (39%), Positives = 21/33 (63%)
Frame = +1
Query: 217 TFKIFIGNLSDKTTEADLRPLFEKYGTVVECDI 315
T +F+GN+ E ++R +FE++G V E DI
Sbjct: 168 TRTLFVGNMPSDVKEREIRHVFEEHGKVEEVDI 200
>AF067616-5|AAU05574.1| 497|Caenorhabditis elegans Hypothetical
protein F29C4.7c protein.
Length = 497
Score = 32.3 bits (70), Expect = 0.21
Identities = 13/33 (39%), Positives = 21/33 (63%)
Frame = +1
Query: 217 TFKIFIGNLSDKTTEADLRPLFEKYGTVVECDI 315
T +F+GN+ E ++R +FE++G V E DI
Sbjct: 145 TRTLFVGNMPSDVKEREIRHVFEEHGKVEEVDI 177
>AC006833-6|AAF60950.1| 491|Caenorhabditis elegans Hypothetical
protein ZK616.1 protein.
Length = 491
Score = 31.9 bits (69), Expect = 0.28
Identities = 16/69 (23%), Positives = 34/69 (49%), Gaps = 1/69 (1%)
Frame = +1
Query: 226 IFIGNLSDKTTEADLRPLFEKYGT-VVECDIVRNYGFVHMENEQVGREAIQNLNGELVHG 402
+F+ +S + +L F VV+C + YGFV + ++ I ++G+ ++G
Sbjct: 98 VFVRGISRDMPDTELYQAFGGITDGVVQCHVADGYGFVLFDTRANAQKKIVEMDGKTLNG 157
Query: 403 QAIKIEAAK 429
+ I + A+
Sbjct: 158 KLISVSWAR 166
>D10877-1|BAA01645.1| 346|Caenorhabditis elegans hnRNP like protein
protein.
Length = 346
Score = 29.9 bits (64), Expect = 1.1
Identities = 10/34 (29%), Positives = 22/34 (64%)
Frame = +1
Query: 223 KIFIGNLSDKTTEADLRPLFEKYGTVVECDIVRN 324
KIF+G L+ TT+ +R + ++G + + ++R+
Sbjct: 24 KIFVGGLTSNTTDDLMREFYSQFGEITDIIVMRD 57
>AF038613-6|ABB51186.1| 347|Caenorhabditis elegans Human hnrnp a1
homolog protein1, isoform d protein.
Length = 347
Score = 29.9 bits (64), Expect = 1.1
Identities = 10/34 (29%), Positives = 22/34 (64%)
Frame = +1
Query: 223 KIFIGNLSDKTTEADLRPLFEKYGTVVECDIVRN 324
KIF+G L+ TT+ +R + ++G + + ++R+
Sbjct: 24 KIFVGGLTSNTTDDLMREFYSQFGEITDIIVMRD 57
>AF038613-5|AAB92051.1| 346|Caenorhabditis elegans Human hnrnp a1
homolog protein1, isoform a protein.
Length = 346
Score = 29.9 bits (64), Expect = 1.1
Identities = 10/34 (29%), Positives = 22/34 (64%)
Frame = +1
Query: 223 KIFIGNLSDKTTEADLRPLFEKYGTVVECDIVRN 324
KIF+G L+ TT+ +R + ++G + + ++R+
Sbjct: 24 KIFVGGLTSNTTDDLMREFYSQFGEITDIIVMRD 57
>U80843-12|AAB37961.2| 317|Caenorhabditis elegans Hypothetical
protein C32B5.5 protein.
Length = 317
Score = 29.5 bits (63), Expect = 1.5
Identities = 10/49 (20%), Positives = 27/49 (55%)
Frame = -2
Query: 284 SNSGLRSASVVLSERFPMKILKVPVPGILDSETHTFHEMSQQRLKRWYF 138
S S ++S++ + P+ ++K+P +L + + + ++ K+W+F
Sbjct: 144 SRSLSAASSLIANSCLPLSLIKLPFKSLLKTNNNPITSIVNRKTKKWHF 192
>AC024845-1|AAF60850.2| 347|Caenorhabditis elegans Hypothetical
protein Y65B4BL.3 protein.
Length = 347
Score = 29.5 bits (63), Expect = 1.5
Identities = 8/20 (40%), Positives = 16/20 (80%)
Frame = +1
Query: 25 LVFIFLTCVIYCYSLYIVTH 84
L+F F++C ++ Y++Y+V H
Sbjct: 104 LIFFFISCTMFLYAVYLVKH 123
>Z77669-6|CAB01243.2| 371|Caenorhabditis elegans Hypothetical
protein T07F10.3 protein.
Length = 371
Score = 29.1 bits (62), Expect = 2.0
Identities = 21/93 (22%), Positives = 40/93 (43%), Gaps = 7/93 (7%)
Frame = +1
Query: 178 NVCVSESKMPGTGTFKIFIGNLSDKTTEADLRPLFEKYGTVVECDIVR-------NYGFV 336
N+C + F + + ++ D +A+L +F+KY + + R GFV
Sbjct: 142 NLCFANDSYNPNSEFNLHVSSVPDDMADAELYRIFDKYQSCRGAKMFRFVDGSSKGSGFV 201
Query: 337 HMENEQVGREAIQNLNGELVHGQAIKIEAAKSR 435
N+ + A+ ++ V G I ++ A SR
Sbjct: 202 RFGNQTDQQMALVEMHRTKVGGCRIILKLAGSR 234
>AF016665-8|AAC71178.1| 324|Caenorhabditis elegans Serpentine
receptor, class h protein250 protein.
Length = 324
Score = 29.1 bits (62), Expect = 2.0
Identities = 11/33 (33%), Positives = 20/33 (60%)
Frame = +1
Query: 25 LVFIFLTCVIYCYSLYIVTHVSIISNFIYPVYS 123
+ F+F+ CV+ Y + H I++NFI ++S
Sbjct: 249 MTFMFIPCVLLLYIVIFKYHNQILNNFIIILFS 281
>Z81120-1|CAB03342.1| 207|Caenorhabditis elegans Hypothetical
protein T12D8.2 protein.
Length = 207
Score = 28.7 bits (61), Expect = 2.6
Identities = 13/39 (33%), Positives = 20/39 (51%)
Frame = +1
Query: 319 RNYGFVHMENEQVGREAIQNLNGELVHGQAIKIEAAKSR 435
+ + +V ENEQ AI LNG + +K+ A+ R
Sbjct: 53 KGFAYVTFENEQQMNTAISGLNGADFGNRVLKVNRAQQR 91
>Z78537-1|CAB01719.1| 182|Caenorhabditis elegans Hypothetical
protein C09F12.1 protein.
Length = 182
Score = 28.3 bits (60), Expect = 3.4
Identities = 12/46 (26%), Positives = 28/46 (60%), Gaps = 3/46 (6%)
Frame = +1
Query: 25 LVFIFLTCVIYCYSLYIV---THVSIISNFIYPVYSLIFSEKYHRF 153
+V+ FLTC+ C YI+ T ++IS + + ++++ ++++F
Sbjct: 95 VVYNFLTCLACCCKKYIIHPLTLFAVISTILLLIAVIVYAAEWNQF 140
>Z66494-2|CAA91257.1| 821|Caenorhabditis elegans Hypothetical
protein C34C6.2 protein.
Length = 821
Score = 28.3 bits (60), Expect = 3.4
Identities = 25/87 (28%), Positives = 40/87 (45%), Gaps = 4/87 (4%)
Frame = +1
Query: 76 VTHVSIISN-FIYPVYSLIFSEKYHRFRRC*LIS*NVCVSESKMPGTGTFKIFIGNLSDK 252
V+ VS IS+ F++ + S I +E +IS +CVS + G + IG + D+
Sbjct: 713 VSDVSFISHHFVFTLLSAITTE---------VISIYICVSMISLTGLNKHHLRIGIIDDE 763
Query: 253 ---TTEADLRPLFEKYGTVVECDIVRN 324
T+E P F K+ D + N
Sbjct: 764 TVCTSECPFSPFFAKFTITDGVDFLNN 790
>Z77666-6|CAB01232.1| 1321|Caenorhabditis elegans Hypothetical
protein K08E7.9 protein.
Length = 1321
Score = 27.5 bits (58), Expect = 6.0
Identities = 11/27 (40%), Positives = 16/27 (59%)
Frame = +1
Query: 55 YCYSLYIVTHVSIISNFIYPVYSLIFS 135
+ SL+I + I FIYP YS+ F+
Sbjct: 750 HALSLFIGMSTATIGGFIYPTYSVFFT 776
>Z22174-4|CAA80129.2| 361|Caenorhabditis elegans Hypothetical
protein K01B6.2 protein.
Length = 361
Score = 27.5 bits (58), Expect = 6.0
Identities = 18/47 (38%), Positives = 28/47 (59%), Gaps = 5/47 (10%)
Frame = +1
Query: 46 CVIYCYSLYIVTHVSI-ISNFI---YPV-YSLIFSEKYHRFRRC*LI 171
C+I CY + I TH+ I ++ FI +P Y IF+E++ F C +I
Sbjct: 96 CLI-CYDISIYTHLVISLNRFISLYFPTSYQNIFTERFTTFLICSII 141
>X65054-1|CAA46190.1| 1321|Caenorhabditis elegans P-glycoprotein A
protein.
Length = 1321
Score = 27.5 bits (58), Expect = 6.0
Identities = 11/27 (40%), Positives = 16/27 (59%)
Frame = +1
Query: 55 YCYSLYIVTHVSIISNFIYPVYSLIFS 135
+ SL+I + I FIYP YS+ F+
Sbjct: 750 HALSLFIGMSTATIGGFIYPTYSVFFT 776
>U23177-3|AAA64333.2| 316|Caenorhabditis elegans Lethal protein 767
protein.
Length = 316
Score = 27.5 bits (58), Expect = 6.0
Identities = 16/52 (30%), Positives = 28/52 (53%)
Frame = +2
Query: 146 IASDAADSFREMYAFQNLKCRAPVLSKSSSGTFLIKPQKPILDRYSKNTVRS 301
+ + A D + YAF+ + VL S + + L + +K IL++YS VR+
Sbjct: 51 VVTGATDGIGKAYAFELARRGFNVLLVSRTQSKLDETKKEILEKYSSIEVRT 102
>AF016679-7|AAB66161.1| 333|Caenorhabditis elegans Hypothetical
protein T28C12.6 protein.
Length = 333
Score = 27.1 bits (57), Expect = 8.0
Identities = 12/26 (46%), Positives = 16/26 (61%)
Frame = +3
Query: 33 HIFNLCYILLFFVHSNPCKYYFKFHL 110
H+ NL I F +SNP K+ F+F L
Sbjct: 60 HLVNLINIQFFPFYSNPPKFCFEFSL 85
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,612,044
Number of Sequences: 27780
Number of extensions: 238010
Number of successful extensions: 946
Number of sequences better than 10.0: 93
Number of HSP's better than 10.0 without gapping: 876
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 935
length of database: 12,740,198
effective HSP length: 77
effective length of database: 10,601,138
effective search space used: 996506972
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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