Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= epV30544
         (516 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

08_02_1258 - 25670092-25670152,25671124-25671327,25671400-256716...    27   6.8  

>08_02_1258 -
           25670092-25670152,25671124-25671327,25671400-25671611,
           25671701-25671749,25671833-25672612,25672696-25672767,
           25672907-25672954,25673053-25673127,25673238-25673312,
           25673614-25673668,25673931-25674016,25674759-25674988
          Length = 648

 Score = 27.5 bits (58), Expect = 6.8
 Identities = 13/31 (41%), Positives = 20/31 (64%)
 Frame = +3

Query: 225 EILEFISQGGWRIYVVDVYGL*LSNKIKNLR 317
           E+L+ +    WRI+ VD YG+  +N+ K LR
Sbjct: 327 ELLDTLVTYLWRIHGVDYYGMSETNEPKGLR 357


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,826,495
Number of Sequences: 37544
Number of extensions: 218423
Number of successful extensions: 298
Number of sequences better than 10.0: 1
Number of HSP's better than 10.0 without gapping: 295
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 298
length of database: 14,793,348
effective HSP length: 77
effective length of database: 11,902,460
effective search space used: 1118831240
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)