Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= epV30539
         (516 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory recept...    23   1.2  
EF592538-1|ABQ95984.1|  582|Tribolium castaneum beta-N-acetylglu...    23   2.1  
AY769607-1|AAV40983.1|  196|Tribolium castaneum heat shock cogna...    23   2.1  
AY769606-1|AAV40982.1|  196|Tribolium castaneum heat shock prote...    23   2.1  
AM292382-1|CAL23194.2|  670|Tribolium castaneum gustatory recept...    23   2.1  
AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory recept...    23   2.1  
AJ876407-1|CAI45288.1|  590|Tribolium castaneum phosphatase prot...    21   8.6  

>AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory receptor
           candidate 46 protein.
          Length = 1451

 Score = 23.4 bits (48), Expect = 1.2
 Identities = 11/45 (24%), Positives = 25/45 (55%)
 Frame = +3

Query: 309 ILLTDTVVRLCLLRRGSWIRSPHRANIYVMNMLLLFFWAFIIYIC 443
           +L+T T+  +C++ +   I   H   I+++ ++   + A + YIC
Sbjct: 609 LLITQTIFIICVIVQSEQIAWLHLLYIFLVGIM---YAADVFYIC 650



 Score = 20.6 bits (41), Expect = 8.6
 Identities = 7/20 (35%), Positives = 12/20 (60%)
 Frame = +2

Query: 224  DSSFKAIIKSALCLQLSSCV 283
            D   K +IK+ + + LS C+
Sbjct: 1147 DERIKLVIKAIIIMILSGCI 1166


>EF592538-1|ABQ95984.1|  582|Tribolium castaneum
           beta-N-acetylglucosaminidase NAG3 protein.
          Length = 582

 Score = 22.6 bits (46), Expect = 2.1
 Identities = 14/36 (38%), Positives = 16/36 (44%)
 Frame = +1

Query: 328 WCASVCYAEGRGFDPHIGQTFM**TCCCSFSGRLLS 435
           W  S  +AE    DP  G  +   T   SFS RL S
Sbjct: 527 WPRSAAFAERIWSDPSAGDDYDIYTRLVSFSDRLKS 562


>AY769607-1|AAV40983.1|  196|Tribolium castaneum heat shock cognate
           70 protein.
          Length = 196

 Score = 22.6 bits (46), Expect = 2.1
 Identities = 8/18 (44%), Positives = 12/18 (66%)
 Frame = -1

Query: 300 KLFIYCTHEDNCKHRADL 247
           +L  YCT +   KH+AD+
Sbjct: 64  RLVEYCTQDFKKKHKADI 81


>AY769606-1|AAV40982.1|  196|Tribolium castaneum heat shock protein
           70 protein.
          Length = 196

 Score = 22.6 bits (46), Expect = 2.1
 Identities = 8/18 (44%), Positives = 12/18 (66%)
 Frame = -1

Query: 300 KLFIYCTHEDNCKHRADL 247
           +L  YCT +   KH+AD+
Sbjct: 64  RLVEYCTQDFKKKHKADI 81


>AM292382-1|CAL23194.2|  670|Tribolium castaneum gustatory receptor
           candidate 61 protein.
          Length = 670

 Score = 22.6 bits (46), Expect = 2.1
 Identities = 7/26 (26%), Positives = 16/26 (61%)
 Frame = +1

Query: 403 CCCSFSGRLLSIYVYN*MYISMFISL 480
           C C ++ ++    VYN ++  +++SL
Sbjct: 273 CYCYYNSKMTKDGVYNTLFFIVYVSL 298


>AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory receptor
           candidate 19 protein.
          Length = 355

 Score = 22.6 bits (46), Expect = 2.1
 Identities = 10/31 (32%), Positives = 19/31 (61%), Gaps = 3/31 (9%)
 Frame = +3

Query: 387 IYVMNMLLL---FFWAFIIYICI*LNVYKYV 470
           I+ ++ LL    F++AFII +C+    Y ++
Sbjct: 91  IFTVHFLLCTYYFYYAFIILLCVYYFYYAFI 121



 Score = 20.6 bits (41), Expect = 8.6
 Identities = 8/26 (30%), Positives = 14/26 (53%)
 Frame = +3

Query: 393 VMNMLLLFFWAFIIYICI*LNVYKYV 470
           +  + LLF+   II +CI    Y ++
Sbjct: 221 IFTIHLLFYCVLIILLCIYYFYYAFI 246


>AJ876407-1|CAI45288.1|  590|Tribolium castaneum phosphatase
           protein.
          Length = 590

 Score = 20.6 bits (41), Expect = 8.6
 Identities = 8/17 (47%), Positives = 11/17 (64%)
 Frame = +2

Query: 371 PTSGKHLCDEHVVALFL 421
           P  G+H   EH++ LFL
Sbjct: 356 PILGRHNTIEHLLPLFL 372


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 127,408
Number of Sequences: 336
Number of extensions: 2881
Number of successful extensions: 9
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 122,585
effective HSP length: 53
effective length of database: 104,777
effective search space used: 12363686
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)