Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= epV30536
         (516 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY785361-1|AAV52865.1|  960|Anopheles gambiae male-specific tran...    25   1.1  
AY146756-1|AAO12071.1|  282|Anopheles gambiae odorant-binding pr...    23   6.1  

>AY785361-1|AAV52865.1|  960|Anopheles gambiae male-specific
           transcription factor FRU-MA protein.
          Length = 960

 Score = 25.4 bits (53), Expect = 1.1
 Identities = 10/29 (34%), Positives = 17/29 (58%)
 Frame = +1

Query: 1   SSPAIPESTPXKPAAAGDSSTDSPPLANT 87
           S P++  +TP  PA+   SS+ S   ++T
Sbjct: 780 SKPSVTSTTPPTPASLSSSSSSSSSASST 808



 Score = 23.8 bits (49), Expect = 3.5
 Identities = 15/46 (32%), Positives = 23/46 (50%)
 Frame = -2

Query: 140 RRSADLAAGTTGASSLDGVLAKGGLSVELSPAAAGXSGVDSGIAGL 3
           R ++  AAG  GA++  GV   GGL  +   AAA  +   +  A +
Sbjct: 599 REASVCAAGGVGAAAAAGV---GGLGCDSGAAAAAAAAAAAAAASI 641


>AY146756-1|AAO12071.1|  282|Anopheles gambiae odorant-binding
           protein AgamOBP40 protein.
          Length = 282

 Score = 23.0 bits (47), Expect = 6.1
 Identities = 6/11 (54%), Positives = 8/11 (72%)
 Frame = -3

Query: 91  TVCWLREGCRW 59
           T+CW+R G  W
Sbjct: 271 TMCWIRSGAIW 281


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.304    0.122    0.337 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 291,420
Number of Sequences: 2352
Number of extensions: 3591
Number of successful extensions: 37
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 36
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 37
length of database: 563,979
effective HSP length: 60
effective length of database: 422,859
effective search space used: 46937349
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.0 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 43 (21.9 bits)