Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= epV30536
(516 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z81038-13|CAB02755.1| 971|Caenorhabditis elegans Hypothetical p... 32 0.28
AF068708-5|AAK68200.1| 628|Caenorhabditis elegans P granule abn... 31 0.37
AF068708-4|AAC17755.1| 693|Caenorhabditis elegans P granule abn... 31 0.37
AB120729-1|BAC87886.1| 693|Caenorhabditis elegans PGL-3 protein. 31 0.37
Z77662-5|CAB01192.2| 579|Caenorhabditis elegans Hypothetical pr... 30 0.85
Z35719-1|CAA84800.1| 296|Caenorhabditis elegans Hypothetical pr... 30 1.1
AF106577-15|AAC78181.1| 104|Caenorhabditis elegans Hypothetical... 30 1.1
Z73969-19|CAJ43440.1| 548|Caenorhabditis elegans Hypothetical p... 29 2.0
Z73969-2|CAA98233.1| 611|Caenorhabditis elegans Hypothetical pr... 29 2.0
Z73969-1|CAA98232.1| 589|Caenorhabditis elegans Hypothetical pr... 29 2.0
U23181-6|AAC48204.1| 801|Caenorhabditis elegans Hypothetical pr... 29 2.0
U67947-1|AAB07557.2| 1147|Caenorhabditis elegans Hypothetical pr... 29 2.6
Z77662-15|CAI79240.1| 255|Caenorhabditis elegans Hypothetical p... 28 3.4
Z81038-14|CAI79153.1| 696|Caenorhabditis elegans Hypothetical p... 28 4.6
Z74472-4|CAA98942.1| 301|Caenorhabditis elegans Hypothetical pr... 28 4.6
V00147-1|CAA23463.1| 296|Caenorhabditis elegans protein ( Caeno... 28 4.6
J01047-1|AAA27988.1| 296|Caenorhabditis elegans protein ( C.ele... 28 4.6
AF047661-4|AAC04435.2| 931|Caenorhabditis elegans Hypothetical ... 28 4.6
AC024772-3|AAF60538.1| 2344|Caenorhabditis elegans Hypothetical ... 28 4.6
U46675-7|AAB52641.1| 1274|Caenorhabditis elegans Hypothetical pr... 27 6.0
Z77663-10|CAB01204.1| 543|Caenorhabditis elegans Hypothetical p... 27 8.0
Z73424-3|CAA97781.2| 1150|Caenorhabditis elegans Hypothetical pr... 27 8.0
>Z81038-13|CAB02755.1| 971|Caenorhabditis elegans Hypothetical
protein C25A1.10a protein.
Length = 971
Score = 31.9 bits (69), Expect = 0.28
Identities = 18/45 (40%), Positives = 24/45 (53%)
Frame = +1
Query: 1 SSPAIPESTPXKPAAAGDSSTDSPPLANTPSKEEAPVVPAAKSAE 135
S+ A P+ K ++ DSS D P TP+K A PA+K AE
Sbjct: 421 SAKATPKPAAKKADSSSDSSDDEAPAKKTPAK--AAPKPASKKAE 463
Score = 30.3 bits (65), Expect = 0.85
Identities = 22/50 (44%), Positives = 27/50 (54%), Gaps = 5/50 (10%)
Frame = +1
Query: 1 SSPAIPESTPXKPAA-----AGDSSTDSPPLANTPSKEEAPVVPAAKSAE 135
+ PA ++TP KPAA + DSS D P TP+K A P AK AE
Sbjct: 264 AKPAPAKATP-KPAAKKADSSSDSSDDEAPAKKTPAK--AAPKPVAKKAE 310
Score = 27.9 bits (59), Expect = 4.6
Identities = 16/45 (35%), Positives = 21/45 (46%)
Frame = +1
Query: 1 SSPAIPESTPXKPAAAGDSSTDSPPLANTPSKEEAPVVPAAKSAE 135
S+ A P+ K ++ DSS D P TP K PV AK +
Sbjct: 634 SAKATPKPAAKKADSSSDSSDDEAPAKKTPVK-PTPVKIVAKKVD 677
Score = 27.1 bits (57), Expect = 8.0
Identities = 14/42 (33%), Positives = 20/42 (47%)
Frame = +1
Query: 10 AIPESTPXKPAAAGDSSTDSPPLANTPSKEEAPVVPAAKSAE 135
A P+ K ++ DSS D P+ +A PAAK A+
Sbjct: 393 ATPKPVAKKAESSSDSSDDEKKPVAKPTSAKATPKPAAKKAD 434
Score = 27.1 bits (57), Expect = 8.0
Identities = 14/42 (33%), Positives = 20/42 (47%)
Frame = +1
Query: 10 AIPESTPXKPAAAGDSSTDSPPLANTPSKEEAPVVPAAKSAE 135
A P+ K ++ DSS D P+ +A PAAK A+
Sbjct: 515 ATPKPVAKKAESSSDSSDDEKKPVAKPTSAKATPKPAAKKAD 556
>AF068708-5|AAK68200.1| 628|Caenorhabditis elegans P granule
abnormality protein 3,isoform b protein.
Length = 628
Score = 31.5 bits (68), Expect = 0.37
Identities = 16/40 (40%), Positives = 18/40 (45%)
Frame = -1
Query: 468 GCFRRGSFAWGRLGHRFALGRFDSDISERDRSDGWHGYRG 349
G RGS+ GR G R G + D DG GYRG
Sbjct: 558 GTSGRGSYGGGRGGDRGGRGAYGGDRGRGGSGDGSRGYRG 597
>AF068708-4|AAC17755.1| 693|Caenorhabditis elegans P granule
abnormality protein 3,isoform a protein.
Length = 693
Score = 31.5 bits (68), Expect = 0.37
Identities = 16/40 (40%), Positives = 18/40 (45%)
Frame = -1
Query: 468 GCFRRGSFAWGRLGHRFALGRFDSDISERDRSDGWHGYRG 349
G RGS+ GR G R G + D DG GYRG
Sbjct: 623 GTSGRGSYGGGRGGDRGGRGAYGGDRGRGGSGDGSRGYRG 662
>AB120729-1|BAC87886.1| 693|Caenorhabditis elegans PGL-3 protein.
Length = 693
Score = 31.5 bits (68), Expect = 0.37
Identities = 16/40 (40%), Positives = 18/40 (45%)
Frame = -1
Query: 468 GCFRRGSFAWGRLGHRFALGRFDSDISERDRSDGWHGYRG 349
G RGS+ GR G R G + D DG GYRG
Sbjct: 623 GTSGRGSYGGGRGGDRGGRGAYGGDRGRGGSGDGSRGYRG 662
>Z77662-5|CAB01192.2| 579|Caenorhabditis elegans Hypothetical
protein F47B8.5 protein.
Length = 579
Score = 30.3 bits (65), Expect = 0.85
Identities = 19/51 (37%), Positives = 23/51 (45%), Gaps = 3/51 (5%)
Frame = +1
Query: 10 AIPESTPXKPAAAGDSSTDSPPLANTPSKEEAPVVPAAKS---AERRKPAG 153
A P S+P AA P A P+ E APV P+A + A PAG
Sbjct: 405 AAPPSSPPADAAPAPPPAPEPVPAPAPAPEAAPVAPSADAGGYAAAAAPAG 455
>Z35719-1|CAA84800.1| 296|Caenorhabditis elegans Hypothetical
protein F17C8.2 protein.
Length = 296
Score = 29.9 bits (64), Expect = 1.1
Identities = 15/47 (31%), Positives = 20/47 (42%)
Frame = +1
Query: 7 PAIPESTPXKPAAAGDSSTDSPPLANTPSKEEAPVVPAAKSAERRKP 147
PA P + +P A GD+ D PP P + P A + E P
Sbjct: 160 PAGPAGSDGQPGAPGDAGKDGPPGPPGPDGDSGPNGEAGPNGEPGAP 206
>AF106577-15|AAC78181.1| 104|Caenorhabditis elegans Hypothetical
protein F46F5.9 protein.
Length = 104
Score = 29.9 bits (64), Expect = 1.1
Identities = 15/35 (42%), Positives = 22/35 (62%)
Frame = +1
Query: 25 TPXKPAAAGDSSTDSPPLANTPSKEEAPVVPAAKS 129
T P+ A +S+TD PP A TP+ E+A AA++
Sbjct: 48 TTATPSTAKESATDPPP-AGTPAPEKAAEAEAAEA 81
>Z73969-19|CAJ43440.1| 548|Caenorhabditis elegans Hypothetical
protein C12D8.1c protein.
Length = 548
Score = 29.1 bits (62), Expect = 2.0
Identities = 13/28 (46%), Positives = 17/28 (60%)
Frame = -2
Query: 107 GASSLDGVLAKGGLSVELSPAAAGXSGV 24
G S + G+ AK G V++SP A SGV
Sbjct: 25 GGSEIQGIQAKAGCRVQMSPDADPSSGV 52
>Z73969-2|CAA98233.1| 611|Caenorhabditis elegans Hypothetical
protein C12D8.1b protein.
Length = 611
Score = 29.1 bits (62), Expect = 2.0
Identities = 13/28 (46%), Positives = 17/28 (60%)
Frame = -2
Query: 107 GASSLDGVLAKGGLSVELSPAAAGXSGV 24
G S + G+ AK G V++SP A SGV
Sbjct: 88 GGSEIQGIQAKAGCRVQMSPDADPSSGV 115
>Z73969-1|CAA98232.1| 589|Caenorhabditis elegans Hypothetical
protein C12D8.1a protein.
Length = 589
Score = 29.1 bits (62), Expect = 2.0
Identities = 13/28 (46%), Positives = 17/28 (60%)
Frame = -2
Query: 107 GASSLDGVLAKGGLSVELSPAAAGXSGV 24
G S + G+ AK G V++SP A SGV
Sbjct: 66 GGSEIQGIQAKAGCRVQMSPDADPSSGV 93
>U23181-6|AAC48204.1| 801|Caenorhabditis elegans Hypothetical
protein ZK84.1 protein.
Length = 801
Score = 29.1 bits (62), Expect = 2.0
Identities = 17/54 (31%), Positives = 25/54 (46%), Gaps = 5/54 (9%)
Frame = +1
Query: 10 AIPESTPXKPAAAGDSSTDSPPLANT----PSKEEAPV-VPAAKSAERRKPAGK 156
++PE TP AA ++ +P T P+ EE P PAA+ PA +
Sbjct: 547 SVPEETPAPAPAADETPAPAPAAEETPAPAPAAEETPAPAPAAEETPATAPAAE 600
Score = 28.3 bits (60), Expect = 3.4
Identities = 17/50 (34%), Positives = 25/50 (50%), Gaps = 1/50 (2%)
Frame = +1
Query: 4 SPAIPESTPXKPAAAG-DSSTDSPPLANTPSKEEAPVVPAAKSAERRKPA 150
+P++P P AAAG DS + P P+ E+ P +A + E PA
Sbjct: 374 APSVP--APVADAAAGYDSPSSIPEETPAPAAEDTPAPASAAAEETPAPA 421
>U67947-1|AAB07557.2| 1147|Caenorhabditis elegans Hypothetical
protein H03E18.1 protein.
Length = 1147
Score = 28.7 bits (61), Expect = 2.6
Identities = 16/44 (36%), Positives = 21/44 (47%), Gaps = 3/44 (6%)
Frame = +1
Query: 16 PESTPXKPAAAGDSSTDSPPLANTP---SKEEAPVVPAAKSAER 138
P+ST KP +ST PP P ++E AAK +ER
Sbjct: 377 PKSTTKKPTKTAAASTKRPPTTEKPTATTEEVKSTTAAAKPSER 420
>Z77662-15|CAI79240.1| 255|Caenorhabditis elegans Hypothetical
protein F47B8.14 protein.
Length = 255
Score = 28.3 bits (60), Expect = 3.4
Identities = 13/41 (31%), Positives = 20/41 (48%)
Frame = +1
Query: 1 SSPAIPESTPXKPAAAGDSSTDSPPLANTPSKEEAPVVPAA 123
++PA P P A + +P A P+++ AP PAA
Sbjct: 184 AAPAEPAPVPAPEPAPEAAPAPAPEAAPVPAQDAAPAAPAA 224
>Z81038-14|CAI79153.1| 696|Caenorhabditis elegans Hypothetical
protein C25A1.10b protein.
Length = 696
Score = 27.9 bits (59), Expect = 4.6
Identities = 16/45 (35%), Positives = 21/45 (46%)
Frame = +1
Query: 1 SSPAIPESTPXKPAAAGDSSTDSPPLANTPSKEEAPVVPAAKSAE 135
S+ A P+ K ++ DSS D P TP K PV AK +
Sbjct: 359 SAKATPKPAAKKADSSSDSSDDEAPAKKTPVK-PTPVKIVAKKVD 402
>Z74472-4|CAA98942.1| 301|Caenorhabditis elegans Hypothetical
protein F23H12.4 protein.
Length = 301
Score = 27.9 bits (59), Expect = 4.6
Identities = 17/45 (37%), Positives = 19/45 (42%), Gaps = 2/45 (4%)
Frame = +1
Query: 4 SPAIPES-TPXKPAAAGDSSTDSPP-LANTPSKEEAPVVPAAKSA 132
+PAI E TP P GDS PP P + P P K A
Sbjct: 208 TPAISEPLTPGAPGEPGDSGPPGPPGPPGAPGNDGPPGPPGPKGA 252
>V00147-1|CAA23463.1| 296|Caenorhabditis elegans protein (
Caenorhabditis elegansgene Col-1 coding for a collagen.
).
Length = 296
Score = 27.9 bits (59), Expect = 4.6
Identities = 17/45 (37%), Positives = 19/45 (42%), Gaps = 2/45 (4%)
Frame = +1
Query: 4 SPAIPES-TPXKPAAAGDSSTDSPP-LANTPSKEEAPVVPAAKSA 132
+PAI E TP P GDS PP P + P P K A
Sbjct: 203 TPAISEPLTPGAPGEPGDSGPPGPPGPPGAPGNDGPPGPPGPKGA 247
>J01047-1|AAA27988.1| 296|Caenorhabditis elegans protein (
C.elegans (nematode)collagen 1 (col-1) gene, complete
cds. ).
Length = 296
Score = 27.9 bits (59), Expect = 4.6
Identities = 17/45 (37%), Positives = 19/45 (42%), Gaps = 2/45 (4%)
Frame = +1
Query: 4 SPAIPES-TPXKPAAAGDSSTDSPP-LANTPSKEEAPVVPAAKSA 132
+PAI E TP P GDS PP P + P P K A
Sbjct: 203 TPAISEPLTPGAPGEPGDSGPPGPPGPPGAPGNDGPPGPPGPKGA 247
>AF047661-4|AAC04435.2| 931|Caenorhabditis elegans Hypothetical
protein M70.1 protein.
Length = 931
Score = 27.9 bits (59), Expect = 4.6
Identities = 14/49 (28%), Positives = 20/49 (40%)
Frame = +1
Query: 1 SSPAIPESTPXKPAAAGDSSTDSPPLANTPSKEEAPVVPAAKSAERRKP 147
+ P+ P+ P P + P P+K+E P K AE KP
Sbjct: 816 TKPSAPKPKPDVPVNPTPQTAKVPVAPAPPAKDEKPKDVNVKKAETEKP 864
>AC024772-3|AAF60538.1| 2344|Caenorhabditis elegans Hypothetical
protein Y40C5A.3 protein.
Length = 2344
Score = 27.9 bits (59), Expect = 4.6
Identities = 12/36 (33%), Positives = 20/36 (55%)
Frame = +1
Query: 1 SSPAIPESTPXKPAAAGDSSTDSPPLANTPSKEEAP 108
S P+IP + P P+++ S+ S P +T + E P
Sbjct: 1629 SIPSIPSTLPVAPSSSSVPSSPSAPSESTSTVSETP 1664
>U46675-7|AAB52641.1| 1274|Caenorhabditis elegans Hypothetical
protein F35A5.1 protein.
Length = 1274
Score = 27.5 bits (58), Expect = 6.0
Identities = 18/43 (41%), Positives = 23/43 (53%), Gaps = 5/43 (11%)
Frame = +1
Query: 4 SPAIP-ESTPX----KPAAAGDSSTDSPPLANTPSKEEAPVVP 117
+P +P + TP +PAAA SP A PSKE P+VP
Sbjct: 160 APTVPAKKTPVLKKKEPAAAAKPRDPSPKKA-APSKEHDPIVP 201
>Z77663-10|CAB01204.1| 543|Caenorhabditis elegans Hypothetical
protein F53F4.11 protein.
Length = 543
Score = 27.1 bits (57), Expect = 8.0
Identities = 15/51 (29%), Positives = 24/51 (47%), Gaps = 2/51 (3%)
Frame = +1
Query: 1 SSPAIPESTPXKPAAAGDSSTDSPPLANTPSKEEAPVV--PAAKSAERRKP 147
++PA P P+ S+ D+P + PVV PAAK+ ++ P
Sbjct: 49 ATPAPKTPAPKTPSRTTKSTVDTPAPKTPTRAAKTPVVKTPAAKTPAKKAP 99
>Z73424-3|CAA97781.2| 1150|Caenorhabditis elegans Hypothetical
protein C44B9.4 protein.
Length = 1150
Score = 27.1 bits (57), Expect = 8.0
Identities = 15/57 (26%), Positives = 25/57 (43%), Gaps = 5/57 (8%)
Frame = +1
Query: 1 SSPAIPESTPXKPAAAGDSSTDSP-----PLANTPSKEEAPVVPAAKSAERRKPAGK 156
+SP P P PA D+ +D+P P+ + KE +P + +P G+
Sbjct: 815 ASPQTPPPIPPPPAVYYDNFSDAPRKRGRPVGSRNRKEGDTTIPKQQRKRNPQPVGR 871
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.304 0.122 0.337
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 6,529,470
Number of Sequences: 27780
Number of extensions: 87881
Number of successful extensions: 415
Number of sequences better than 10.0: 22
Number of HSP's better than 10.0 without gapping: 362
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 413
length of database: 12,740,198
effective HSP length: 77
effective length of database: 10,601,138
effective search space used: 996506972
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.0 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 43 (21.9 bits)
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