Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= epV30536
(516 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At2g18470.1 68415.m02151 protein kinase family protein contains ... 31 0.61
At4g37450.1 68417.m05301 arabinogalactan-protein (AGP18) identic... 30 1.1
At1g36150.1 68414.m04494 protease inhibitor/seed storage/lipid t... 29 1.4
At5g64310.1 68418.m08078 arabinogalactan-protein (AGP1) identica... 29 1.9
At5g07510.1 68418.m00860 glycine-rich protein (GRP14) oleosin; g... 29 2.5
At3g19020.1 68416.m02415 leucine-rich repeat family protein / ex... 29 2.5
At1g68725.1 68414.m07853 arabinogalactan-protein, putative (AGP1... 28 3.2
At5g22010.1 68418.m02561 AAA-type ATPase family protein / BRCT d... 28 4.3
At3g60280.1 68416.m06738 uclacyanin 3 (UCC3) identical to uclacy... 27 5.7
At5g24630.1 68418.m02909 expressed protein ; expression support... 27 7.5
At5g67470.1 68418.m08507 formin homology 2 domain-containing pro... 27 9.9
At5g49110.1 68418.m06079 expressed protein ; expression support... 27 9.9
At5g37475.1 68418.m04510 translation initiation factor-related s... 27 9.9
At1g62760.1 68414.m07083 invertase/pectin methylesterase inhibit... 27 9.9
At1g20130.1 68414.m02518 family II extracellular lipase, putativ... 27 9.9
>At2g18470.1 68415.m02151 protein kinase family protein contains
Pfam PF00069: Protein kinase domain
Length = 633
Score = 30.7 bits (66), Expect = 0.61
Identities = 17/50 (34%), Positives = 24/50 (48%)
Frame = +1
Query: 1 SSPAIPESTPXKPAAAGDSSTDSPPLANTPSKEEAPVVPAAKSAERRKPA 150
SSP P S P GDSS+ PP + +P +AP P + + P+
Sbjct: 28 SSPPAP-SPPSPTPPQGDSSSSPPPDSTSPPAPQAPNPPNSSNNSPSPPS 76
>At4g37450.1 68417.m05301 arabinogalactan-protein (AGP18) identical
to gi_11935088_gb_AAG41964
Length = 209
Score = 29.9 bits (64), Expect = 1.1
Identities = 17/46 (36%), Positives = 22/46 (47%)
Frame = +1
Query: 13 IPESTPXKPAAAGDSSTDSPPLANTPSKEEAPVVPAAKSAERRKPA 150
+PES+P PA S SPP+ P + P AA A+ PA
Sbjct: 86 VPESSPPVPAPMVSSPVSSPPVP-APVADSPPAPVAAPVADVPAPA 130
>At1g36150.1 68414.m04494 protease inhibitor/seed storage/lipid
transfer protein (LTP) family protein low similarity to
glucoamylase S1/S2 [Precursor] from Saccharomyces
cerevisiae [SP|P08640], proteophosphoglycan from
Leishmania major [GI:5420387]; contains Pfam protease
inhibitor/seed storage/LTP family domain PF00234
Length = 256
Score = 29.5 bits (63), Expect = 1.4
Identities = 17/45 (37%), Positives = 24/45 (53%), Gaps = 4/45 (8%)
Frame = +1
Query: 1 SSPAIPESTPX----KPAAAGDSSTDSPPLANTPSKEEAPVVPAA 123
SSPA+ S+P P A SST S P A +PS +P + ++
Sbjct: 189 SSPAVSHSSPVVAASSPVKAVSSSTASSPRAASPSPSPSPSISSS 233
>At5g64310.1 68418.m08078 arabinogalactan-protein (AGP1) identical
to gi:3883120 gb:AAC77823
Length = 131
Score = 29.1 bits (62), Expect = 1.9
Identities = 19/57 (33%), Positives = 28/57 (49%), Gaps = 4/57 (7%)
Frame = +1
Query: 4 SPAIPESTPXKPAAA----GDSSTDSPPLANTPSKEEAPVVPAAKSAERRKPAGKLQ 162
+PA S PAAA +S SPPLA++P+ + + P+A S + G Q
Sbjct: 50 APAPEVSPSPSPAAALTPESSASPPSPPLADSPTADSPALSPSAISDSPTEAPGPAQ 106
>At5g07510.1 68418.m00860 glycine-rich protein (GRP14) oleosin;
glycine-rich protein 14 (GRP14) PMID:11431566;
PIR:JQ1063
Length = 193
Score = 28.7 bits (61), Expect = 2.5
Identities = 13/32 (40%), Positives = 17/32 (53%)
Frame = +1
Query: 37 PAAAGDSSTDSPPLANTPSKEEAPVVPAAKSA 132
P AAG +S D+PP P+ AP A +A
Sbjct: 158 PGAAGAASGDAPPAETAPAAGAAPAAGAEPAA 189
>At3g19020.1 68416.m02415 leucine-rich repeat family protein /
extensin family protein similar to extensin-like protein
[Lycopersicon esculentum] gi|5917664|gb|AAD55979;
contains leucine-rich repeats, Pfam:PF00560; contains
proline rich extensin domains, INTERPRO:IPR002965
Length = 956
Score = 28.7 bits (61), Expect = 2.5
Identities = 17/48 (35%), Positives = 21/48 (43%), Gaps = 1/48 (2%)
Frame = +1
Query: 7 PAIPESTPX-KPAAAGDSSTDSPPLANTPSKEEAPVVPAAKSAERRKP 147
P PE +P +P +S PP TP EE+P P E KP
Sbjct: 516 PPKPEESPKPEPPKPEESPKPQPPKQETPKPEESP-KPQPPKQETPKP 562
>At1g68725.1 68414.m07853 arabinogalactan-protein, putative (AGP19)
non-consensus splice site at the intron:exon boundary
(AT:exon)
Length = 247
Score = 28.3 bits (60), Expect = 3.2
Identities = 18/49 (36%), Positives = 22/49 (44%), Gaps = 1/49 (2%)
Frame = +1
Query: 1 SSPAIPESTPXKPAAAGDSSTDSPPLANTPSKEEAPVVPA-AKSAERRK 144
S P P S P PA+ + SPP PS P PA A + +RK
Sbjct: 131 SPPPAPASPPPAPASPPPAPV-SPPPVQAPSPISLPPAPAPAPTKHKRK 178
Score = 27.5 bits (58), Expect = 5.7
Identities = 12/40 (30%), Positives = 18/40 (45%)
Frame = +1
Query: 4 SPAIPESTPXKPAAAGDSSTDSPPLANTPSKEEAPVVPAA 123
SPA P P + A + PP++ P+ P PA+
Sbjct: 92 SPATPPPQPPQSPPASAPTVSPPPVSPPPAPTSPPPTPAS 131
>At5g22010.1 68418.m02561 AAA-type ATPase family protein / BRCT
domain-containing protein contains Pfam profiles:
PF00533 BRCA1 C Terminus (BRCT) domain, PF00004 ATPase
family associated with various cellular activities (AAA)
Length = 956
Score = 27.9 bits (59), Expect = 4.3
Identities = 17/52 (32%), Positives = 26/52 (50%)
Frame = +1
Query: 1 SSPAIPESTPXKPAAAGDSSTDSPPLANTPSKEEAPVVPAAKSAERRKPAGK 156
SS + +S P + + G +PP +P KEE P AKS+ ++ P K
Sbjct: 281 SSKPVKKSLPER-SNKGTEKICAPP-KTSPQKEETRGKPLAKSSPKKVPPAK 330
>At3g60280.1 68416.m06738 uclacyanin 3 (UCC3) identical to
uclacyanin 3 GI:3395770 from [Arabidopsis thaliana];
contains Pfam profile PF02298: Plastocyanin-like domain;
identical to cDNA uclacyanin 3 (UCC3)GI:3395769
Length = 222
Score = 27.5 bits (58), Expect = 5.7
Identities = 17/54 (31%), Positives = 26/54 (48%), Gaps = 5/54 (9%)
Frame = +1
Query: 1 SSPAIPESTPXKPAA-----AGDSSTDSPPLANTPSKEEAPVVPAAKSAERRKP 147
S+P+ P STP P++ + SS SPP +PS + + P+A P
Sbjct: 126 STPSSPPSTPSTPSSPPSTPSTPSSPPSPPSPPSPSLPPSSLPPSASPPTNGTP 179
>At5g24630.1 68418.m02909 expressed protein ; expression supported
by MPSS
Length = 531
Score = 27.1 bits (57), Expect = 7.5
Identities = 14/45 (31%), Positives = 20/45 (44%)
Frame = +1
Query: 22 STPXKPAAAGDSSTDSPPLANTPSKEEAPVVPAAKSAERRKPAGK 156
+T KP A T PSKE+ P A+++ +KP K
Sbjct: 486 NTKAKPKAKAKGETVIGKKRGRPSKEKQPPAKKARNSAPKKPKAK 530
>At5g67470.1 68418.m08507 formin homology 2 domain-containing
protein / FH2 domain-containing protein contains formin
homology 2 domain, Pfam:PF02181
Length = 899
Score = 26.6 bits (56), Expect = 9.9
Identities = 15/38 (39%), Positives = 19/38 (50%)
Frame = +1
Query: 7 PAIPESTPXKPAAAGDSSTDSPPLANTPSKEEAPVVPA 120
P PES+ P ST SPPL +TP + P P+
Sbjct: 34 PLFPESSTPPPPDF--QSTPSPPLPDTPDQPFFPENPS 69
>At5g49110.1 68418.m06079 expressed protein ; expression supported by
MPSS
Length = 1487
Score = 26.6 bits (56), Expect = 9.9
Identities = 15/49 (30%), Positives = 20/49 (40%), Gaps = 2/49 (4%)
Frame = +1
Query: 1 SSPAIPESTPXKPAAAGDSSTDSPPLANTP--SKEEAPVVPAAKSAERR 141
SS + E P KP GD PPL K E P+ + E++
Sbjct: 905 SSLCMKEENPLKPLVCGDMKVLGPPLLKVVYLLKPEPPLATGQTNKEKK 953
>At5g37475.1 68418.m04510 translation initiation factor-related
similar to Eukaryotic translation initiation factor 3
subunit 1 (eIF-3 alpha) (eIF3 p35) (eIF3j)
(Swiss-Prot:O75822) [Homo sapiens]
Length = 225
Score = 26.6 bits (56), Expect = 9.9
Identities = 10/30 (33%), Positives = 17/30 (56%)
Frame = +1
Query: 52 DSSTDSPPLANTPSKEEAPVVPAAKSAERR 141
+ +PP P+ E+AP PA K+ E++
Sbjct: 38 EEDVSAPPPIVKPASEKAPKKPAVKAVEKK 67
>At1g62760.1 68414.m07083 invertase/pectin methylesterase inhibitor
family protein low similarity to extensin [Volvox
carteri] GI:21992
Length = 312
Score = 26.6 bits (56), Expect = 9.9
Identities = 12/35 (34%), Positives = 18/35 (51%)
Frame = +1
Query: 4 SPAIPESTPXKPAAAGDSSTDSPPLANTPSKEEAP 108
SP+ P S+P + S + PPL+ +PS P
Sbjct: 37 SPSPPSSSPSSAPPSSLSPSSPPPLSLSPSSPPPP 71
Score = 26.6 bits (56), Expect = 9.9
Identities = 12/35 (34%), Positives = 18/35 (51%)
Frame = +1
Query: 4 SPAIPESTPXKPAAAGDSSTDSPPLANTPSKEEAP 108
SP+ P S+P + S + PPL+ +PS P
Sbjct: 86 SPSPPSSSPSSAPPSSLSPSSPPPLSLSPSSPPPP 120
>At1g20130.1 68414.m02518 family II extracellular lipase, putative
contains Pfam profile PF00657: GDSL-like
Lipase/Acylhydrolase; similar to EXL3 (PMID:11431566)
Length = 1006
Score = 26.6 bits (56), Expect = 9.9
Identities = 14/45 (31%), Positives = 16/45 (35%)
Frame = +1
Query: 16 PESTPXKPAAAGDSSTDSPPLANTPSKEEAPVVPAAKSAERRKPA 150
P+ P P A S SPP P P P + KPA
Sbjct: 36 PKPQPKPPPAPSPSPCPSPPPKPQPKPVPPPACPPTPPKPQPKPA 80
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.304 0.122 0.337
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 6,455,533
Number of Sequences: 28952
Number of extensions: 86491
Number of successful extensions: 322
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 287
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 320
length of database: 12,070,560
effective HSP length: 76
effective length of database: 9,870,208
effective search space used: 937669760
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.0 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 43 (21.9 bits)
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