Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= epV30530
(516 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z81584-6|CAB04678.1| 376|Caenorhabditis elegans Hypothetical pr... 130 8e-31
Z81584-5|CAB04675.1| 376|Caenorhabditis elegans Hypothetical pr... 130 8e-31
Z81584-4|CAB04676.1| 376|Caenorhabditis elegans Hypothetical pr... 130 8e-31
X16799-1|CAA34720.1| 376|Caenorhabditis elegans actin protein. 130 8e-31
X16797-1|CAA34718.1| 376|Caenorhabditis elegans actin protein. 130 8e-31
X16796-1|CAA34717.1| 376|Caenorhabditis elegans actin protein. 130 8e-31
U64601-7|AAK77622.1| 332|Caenorhabditis elegans Actin protein 4... 130 8e-31
U64601-6|AAT92068.1| 362|Caenorhabditis elegans Actin protein 4... 130 8e-31
U64601-5|AAB04575.1| 376|Caenorhabditis elegans Actin protein 4... 130 8e-31
Z83241-1|CAB05817.1| 375|Caenorhabditis elegans Hypothetical pr... 126 1e-29
X16798-1|CAA34719.1| 375|Caenorhabditis elegans actin protein. 124 5e-29
AC006833-3|AAF60947.2| 436|Caenorhabditis elegans Hypothetical ... 74 5e-14
AL132949-19|CAB70110.2| 374|Caenorhabditis elegans Hypothetical... 65 3e-11
Z71181-1|CAA94894.1| 395|Caenorhabditis elegans Hypothetical pr... 55 3e-08
U40799-8|AAA81487.1| 552|Caenorhabditis elegans Hypothetical pr... 45 4e-05
AC024200-9|AAF36012.1| 425|Caenorhabditis elegans Arp2/3 comple... 41 6e-04
Z46676-5|CAA86667.3| 418|Caenorhabditis elegans Hypothetical pr... 32 0.28
U24189-2|AAC47513.1| 418|Caenorhabditis elegans actin-related p... 32 0.28
>Z81584-6|CAB04678.1| 376|Caenorhabditis elegans Hypothetical
protein T04C12.6 protein.
Length = 376
Score = 130 bits (313), Expect = 8e-31
Identities = 62/76 (81%), Positives = 63/76 (82%)
Frame = -3
Query: 514 SGGTXMYPGIADRMQKEIXALXPSTXXXXXIAPPXRKYSVWIGGSILASLSXFQXMWISK 335
SGGT MYPGIADRMQKEI AL PST IAPP RKYSVWIGGSILASLS FQ MWISK
Sbjct: 301 SGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISK 360
Query: 334 EEYDESGPGIVXRKCF 287
+EYDESGP IV RKCF
Sbjct: 361 QEYDESGPSIVHRKCF 376
>Z81584-5|CAB04675.1| 376|Caenorhabditis elegans Hypothetical
protein T04C12.5 protein.
Length = 376
Score = 130 bits (313), Expect = 8e-31
Identities = 62/76 (81%), Positives = 63/76 (82%)
Frame = -3
Query: 514 SGGTXMYPGIADRMQKEIXALXPSTXXXXXIAPPXRKYSVWIGGSILASLSXFQXMWISK 335
SGGT MYPGIADRMQKEI AL PST IAPP RKYSVWIGGSILASLS FQ MWISK
Sbjct: 301 SGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISK 360
Query: 334 EEYDESGPGIVXRKCF 287
+EYDESGP IV RKCF
Sbjct: 361 QEYDESGPSIVHRKCF 376
>Z81584-4|CAB04676.1| 376|Caenorhabditis elegans Hypothetical
protein T04C12.4 protein.
Length = 376
Score = 130 bits (313), Expect = 8e-31
Identities = 62/76 (81%), Positives = 63/76 (82%)
Frame = -3
Query: 514 SGGTXMYPGIADRMQKEIXALXPSTXXXXXIAPPXRKYSVWIGGSILASLSXFQXMWISK 335
SGGT MYPGIADRMQKEI AL PST IAPP RKYSVWIGGSILASLS FQ MWISK
Sbjct: 301 SGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISK 360
Query: 334 EEYDESGPGIVXRKCF 287
+EYDESGP IV RKCF
Sbjct: 361 QEYDESGPSIVHRKCF 376
>X16799-1|CAA34720.1| 376|Caenorhabditis elegans actin protein.
Length = 376
Score = 130 bits (313), Expect = 8e-31
Identities = 62/76 (81%), Positives = 63/76 (82%)
Frame = -3
Query: 514 SGGTXMYPGIADRMQKEIXALXPSTXXXXXIAPPXRKYSVWIGGSILASLSXFQXMWISK 335
SGGT MYPGIADRMQKEI AL PST IAPP RKYSVWIGGSILASLS FQ MWISK
Sbjct: 301 SGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISK 360
Query: 334 EEYDESGPGIVXRKCF 287
+EYDESGP IV RKCF
Sbjct: 361 QEYDESGPSIVHRKCF 376
>X16797-1|CAA34718.1| 376|Caenorhabditis elegans actin protein.
Length = 376
Score = 130 bits (313), Expect = 8e-31
Identities = 62/76 (81%), Positives = 63/76 (82%)
Frame = -3
Query: 514 SGGTXMYPGIADRMQKEIXALXPSTXXXXXIAPPXRKYSVWIGGSILASLSXFQXMWISK 335
SGGT MYPGIADRMQKEI AL PST IAPP RKYSVWIGGSILASLS FQ MWISK
Sbjct: 301 SGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISK 360
Query: 334 EEYDESGPGIVXRKCF 287
+EYDESGP IV RKCF
Sbjct: 361 QEYDESGPSIVHRKCF 376
>X16796-1|CAA34717.1| 376|Caenorhabditis elegans actin protein.
Length = 376
Score = 130 bits (313), Expect = 8e-31
Identities = 62/76 (81%), Positives = 63/76 (82%)
Frame = -3
Query: 514 SGGTXMYPGIADRMQKEIXALXPSTXXXXXIAPPXRKYSVWIGGSILASLSXFQXMWISK 335
SGGT MYPGIADRMQKEI AL PST IAPP RKYSVWIGGSILASLS FQ MWISK
Sbjct: 301 SGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISK 360
Query: 334 EEYDESGPGIVXRKCF 287
+EYDESGP IV RKCF
Sbjct: 361 QEYDESGPSIVHRKCF 376
>U64601-7|AAK77622.1| 332|Caenorhabditis elegans Actin protein 4,
isoform b protein.
Length = 332
Score = 130 bits (313), Expect = 8e-31
Identities = 62/76 (81%), Positives = 63/76 (82%)
Frame = -3
Query: 514 SGGTXMYPGIADRMQKEIXALXPSTXXXXXIAPPXRKYSVWIGGSILASLSXFQXMWISK 335
SGGT MYPGIADRMQKEI AL PST IAPP RKYSVWIGGSILASLS FQ MWISK
Sbjct: 257 SGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISK 316
Query: 334 EEYDESGPGIVXRKCF 287
+EYDESGP IV RKCF
Sbjct: 317 QEYDESGPSIVHRKCF 332
>U64601-6|AAT92068.1| 362|Caenorhabditis elegans Actin protein 4,
isoform c protein.
Length = 362
Score = 130 bits (313), Expect = 8e-31
Identities = 62/76 (81%), Positives = 63/76 (82%)
Frame = -3
Query: 514 SGGTXMYPGIADRMQKEIXALXPSTXXXXXIAPPXRKYSVWIGGSILASLSXFQXMWISK 335
SGGT MYPGIADRMQKEI AL PST IAPP RKYSVWIGGSILASLS FQ MWISK
Sbjct: 287 SGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISK 346
Query: 334 EEYDESGPGIVXRKCF 287
+EYDESGP IV RKCF
Sbjct: 347 QEYDESGPSIVHRKCF 362
>U64601-5|AAB04575.1| 376|Caenorhabditis elegans Actin protein 4,
isoform a protein.
Length = 376
Score = 130 bits (313), Expect = 8e-31
Identities = 62/76 (81%), Positives = 63/76 (82%)
Frame = -3
Query: 514 SGGTXMYPGIADRMQKEIXALXPSTXXXXXIAPPXRKYSVWIGGSILASLSXFQXMWISK 335
SGGT MYPGIADRMQKEI AL PST IAPP RKYSVWIGGSILASLS FQ MWISK
Sbjct: 301 SGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISK 360
Query: 334 EEYDESGPGIVXRKCF 287
+EYDESGP IV RKCF
Sbjct: 361 QEYDESGPSIVHRKCF 376
>Z83241-1|CAB05817.1| 375|Caenorhabditis elegans Hypothetical
protein T25C8.2 protein.
Length = 375
Score = 126 bits (303), Expect = 1e-29
Identities = 60/76 (78%), Positives = 62/76 (81%)
Frame = -3
Query: 514 SGGTXMYPGIADRMQKEIXALXPSTXXXXXIAPPXRKYSVWIGGSILASLSXFQXMWISK 335
SGGT M+PGIADRMQKEI L PST IAPP RKYSVWIGGSILASLS FQ MWISK
Sbjct: 300 SGGTSMFPGIADRMQKEIQHLAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISK 359
Query: 334 EEYDESGPGIVXRKCF 287
+EYDESGP IV RKCF
Sbjct: 360 QEYDESGPSIVHRKCF 375
>X16798-1|CAA34719.1| 375|Caenorhabditis elegans actin protein.
Length = 375
Score = 124 bits (298), Expect = 5e-29
Identities = 61/76 (80%), Positives = 62/76 (81%)
Frame = -3
Query: 514 SGGTXMYPGIADRMQKEIXALXPSTXXXXXIAPPXRKYSVWIGGSILASLSXFQXMWISK 335
SGGT MYPGIADRMQKEI AL P T IAPP RKYSVWIGGSILASLS FQ MWISK
Sbjct: 301 SGGTTMYPGIADRMQKEITALAP-TMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISK 359
Query: 334 EEYDESGPGIVXRKCF 287
+EYDESGP IV RKCF
Sbjct: 360 QEYDESGPSIVHRKCF 375
>AC006833-3|AAF60947.2| 436|Caenorhabditis elegans Hypothetical
protein ZK616.4 protein.
Length = 436
Score = 74.1 bits (174), Expect = 5e-14
Identities = 36/78 (46%), Positives = 43/78 (55%), Gaps = 3/78 (3%)
Frame = -3
Query: 514 SGGTXMYPGIADRMQKEIXALXPSTXXXXXIAPPX---RKYSVWIGGSILASLSXFQXMW 344
+GG + G +R+ + P T A P RKY WIGGSIL SL FQ MW
Sbjct: 358 TGGNSLILGFTERLNYALATKCPPTIKLRVFAAPTQAERKYGAWIGGSILGSLGTFQQMW 417
Query: 343 ISKEEYDESGPGIVXRKC 290
+SK EYDESG IV +KC
Sbjct: 418 VSKAEYDESGKSIVEKKC 435
>AL132949-19|CAB70110.2| 374|Caenorhabditis elegans Hypothetical
protein Y53F4B.22 protein.
Length = 374
Score = 64.9 bits (151), Expect = 3e-11
Identities = 28/76 (36%), Positives = 43/76 (56%)
Frame = -3
Query: 514 SGGTXMYPGIADRMQKEIXALXPSTXXXXXIAPPXRKYSVWIGGSILASLSXFQXMWISK 335
SGGT ++ G DR+ E+ + P+ A R WIGGSI+ASL F+ MW+ K
Sbjct: 299 SGGTTLFKGFGDRLLGEMRKIAPADGKIRISASQERNSLTWIGGSIVASLDTFRKMWLGK 358
Query: 334 EEYDESGPGIVXRKCF 287
+EY++ G + ++ F
Sbjct: 359 KEYEDMGASAMHKRFF 374
>Z71181-1|CAA94894.1| 395|Caenorhabditis elegans Hypothetical
protein K07C5.1 protein.
Length = 395
Score = 55.2 bits (127), Expect = 3e-08
Identities = 31/80 (38%), Positives = 44/80 (55%), Gaps = 13/80 (16%)
Frame = -3
Query: 514 SGGTXMYPGIADRMQKEIXALXPSTXXXXXI-----------APPXRKYSVWIGGSILAS 368
SGGT MYPG+ R++KE+ L APP RK+ V++GG++LA+
Sbjct: 304 SGGTTMYPGLPSRLEKELKQLYLDRVLHGNTDAFQKFKIRIEAPPSRKHMVFLGGAVLAN 363
Query: 367 L--SXFQXMWISKEEYDESG 314
L Q W+SK+EY+E G
Sbjct: 364 LMKDRDQDFWVSKKEYEEGG 383
>U40799-8|AAA81487.1| 552|Caenorhabditis elegans Hypothetical
protein F42C5.9 protein.
Length = 552
Score = 44.8 bits (101), Expect = 4e-05
Identities = 19/62 (30%), Positives = 36/62 (58%)
Frame = -3
Query: 514 SGGTXMYPGIADRMQKEIXALXPSTXXXXXIAPPXRKYSVWIGGSILASLSXFQXMWISK 335
+GG + PGIA+++++E+ + P+T P R + ++G I+AS S F+ IS
Sbjct: 478 AGGASLMPGIAEKLEQELSTVVPNTIHTQVNISPWRYNAAYLGAQIVASASTFEDSCISL 537
Query: 334 EE 329
++
Sbjct: 538 QQ 539
>AC024200-9|AAF36012.1| 425|Caenorhabditis elegans Arp2/3 complex
component protein 1 protein.
Length = 425
Score = 40.7 bits (91), Expect = 6e-04
Identities = 18/35 (51%), Positives = 24/35 (68%)
Frame = -3
Query: 409 RKYSVWIGGSILASLSXFQXMWISKEEYDESGPGI 305
++Y+VW GGS+LAS S F + +K EY E GP I
Sbjct: 380 QRYAVWFGGSMLASTSEFYQVSHTKAEYMERGPSI 414
>Z46676-5|CAA86667.3| 418|Caenorhabditis elegans Hypothetical
protein C08B11.6 protein.
Length = 418
Score = 31.9 bits (69), Expect = 0.28
Identities = 16/70 (22%), Positives = 35/70 (50%), Gaps = 1/70 (1%)
Frame = -3
Query: 511 GGTXMYPGIADRMQKEIXALXPSTXXXXXIAPPXRKYS-VWIGGSILASLSXFQXMWISK 335
GG+ +PG +R+++E+ ++ P+ + W G L + S + WI++
Sbjct: 316 GGSSCFPGFRERLEREVRSMLPAEYGLNVSNDVINPQTHSWHCGQELLTAS--KVPWINR 373
Query: 334 EEYDESGPGI 305
+++DE G +
Sbjct: 374 KDWDERGDSL 383
>U24189-2|AAC47513.1| 418|Caenorhabditis elegans actin-related
protein-like protein.
Length = 418
Score = 31.9 bits (69), Expect = 0.28
Identities = 16/70 (22%), Positives = 35/70 (50%), Gaps = 1/70 (1%)
Frame = -3
Query: 511 GGTXMYPGIADRMQKEIXALXPSTXXXXXIAPPXRKYS-VWIGGSILASLSXFQXMWISK 335
GG+ +PG +R+++E+ ++ P+ + W G L + S + WI++
Sbjct: 316 GGSSCFPGFRERLEREVRSMLPAEYGLNVSNDVINPQTHSWHCGQELLTAS--KVPWINR 373
Query: 334 EEYDESGPGI 305
+++DE G +
Sbjct: 374 KDWDERGDSL 383
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 8,002,972
Number of Sequences: 27780
Number of extensions: 115152
Number of successful extensions: 184
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 175
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 182
length of database: 12,740,198
effective HSP length: 77
effective length of database: 10,601,138
effective search space used: 996506972
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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