Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= epV30528
(508 letters)
Database: tribolium
336 sequences; 122,585 total letters
Searching.......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY769608-1|AAV40984.1| 195|Tribolium castaneum heat shock prote... 22 2.7
AY600513-1|AAT11861.1| 314|Tribolium castaneum spalt-like prote... 22 3.6
DQ659254-1|ABG47452.1| 431|Tribolium castaneum imaginal disc gr... 21 4.8
DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro... 21 6.3
AM295014-1|CAL25729.1| 407|Tribolium castaneum ultraspiracle nu... 21 6.3
AM292370-1|CAL23182.1| 418|Tribolium castaneum gustatory recept... 21 6.3
AM292335-1|CAL23147.2| 374|Tribolium castaneum gustatory recept... 21 6.3
AF317551-1|AAG39634.1| 312|Tribolium castaneum distal-less prot... 21 6.3
X06905-1|CAA30009.1| 489|Tribolium castaneum protein ( Triboliu... 21 8.4
AY695258-1|AAW21975.1| 232|Tribolium castaneum muscle segment h... 21 8.4
>AY769608-1|AAV40984.1| 195|Tribolium castaneum heat shock protein
70 protein.
Length = 195
Score = 22.2 bits (45), Expect = 2.7
Identities = 8/14 (57%), Positives = 11/14 (78%)
Frame = +2
Query: 293 IENGVFDVLVTGDD 334
I+NGVF+V+ T D
Sbjct: 39 IDNGVFEVVATSGD 52
>AY600513-1|AAT11861.1| 314|Tribolium castaneum spalt-like protein
protein.
Length = 314
Score = 21.8 bits (44), Expect = 3.6
Identities = 8/27 (29%), Positives = 18/27 (66%)
Frame = +2
Query: 179 RSLDAQQMQQVLDAMFEKRSEPGEYVI 259
++ + ++QQ++D + K S+P + VI
Sbjct: 113 KTSETSKLQQLVDNIEHKLSDPNQCVI 139
>DQ659254-1|ABG47452.1| 431|Tribolium castaneum imaginal disc
growth factor 4 protein.
Length = 431
Score = 21.4 bits (43), Expect = 4.8
Identities = 10/23 (43%), Positives = 15/23 (65%)
Frame = +3
Query: 354 THTKVPVRLANWP*CTTCRGRHL 422
++ +V V+LAN TT G+HL
Sbjct: 329 SYPEVCVKLANPQKLTTAAGKHL 351
>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10
protein.
Length = 2700
Score = 21.0 bits (42), Expect = 6.3
Identities = 10/16 (62%), Positives = 10/16 (62%), Gaps = 1/16 (6%)
Frame = +2
Query: 47 RKSVFAET-YDPEEDD 91
R S ET YDP EDD
Sbjct: 160 RHSEIVETVYDPREDD 175
>AM295014-1|CAL25729.1| 407|Tribolium castaneum ultraspiracle
nuclear receptor protein.
Length = 407
Score = 21.0 bits (42), Expect = 6.3
Identities = 7/25 (28%), Positives = 16/25 (64%)
Frame = -1
Query: 358 CVDHLFDAVVSGDQDVENAVLDDVE 284
C++HLF + GD ++ +++ +E
Sbjct: 378 CLEHLFFFKLIGDVPIDTFLMEMLE 402
>AM292370-1|CAL23182.1| 418|Tribolium castaneum gustatory receptor
candidate 49 protein.
Length = 418
Score = 21.0 bits (42), Expect = 6.3
Identities = 18/68 (26%), Positives = 32/68 (47%), Gaps = 3/68 (4%)
Frame = -2
Query: 363 SYVWTTFSTRSSPVTRTSKTPFSMT*KLSPSSPCLITYSPGSD---LFSNIASRTCCICC 193
SY++TT+S + S + + T L+ + ++ Y +D L SN+ S
Sbjct: 92 SYIYTTYSRKLSGIFKYIDQMAGYTGFLAMLTSMVMFYKRSNDLKTLLSNLES-IQIYSI 150
Query: 192 ASRERNSS 169
+ERNS+
Sbjct: 151 KPKERNSN 158
>AM292335-1|CAL23147.2| 374|Tribolium castaneum gustatory receptor
candidate 14 protein.
Length = 374
Score = 21.0 bits (42), Expect = 6.3
Identities = 18/68 (26%), Positives = 32/68 (47%), Gaps = 3/68 (4%)
Frame = -2
Query: 363 SYVWTTFSTRSSPVTRTSKTPFSMT*KLSPSSPCLITYSPGSD---LFSNIASRTCCICC 193
SY++TT+S + S + + T L+ + ++ Y +D L SN+ S
Sbjct: 48 SYIYTTYSRKLSGIFKYIDQMAGYTGFLAMLTSMVMFYKRSNDLKTLLSNLES-IQIYSI 106
Query: 192 ASRERNSS 169
+ERNS+
Sbjct: 107 KPKERNSN 114
>AF317551-1|AAG39634.1| 312|Tribolium castaneum distal-less
protein.
Length = 312
Score = 21.0 bits (42), Expect = 6.3
Identities = 8/16 (50%), Positives = 8/16 (50%)
Frame = -1
Query: 451 PQSAGGLGPYRCRPRH 404
P G LG Y RP H
Sbjct: 65 PSPRGALGAYPFRPMH 80
>X06905-1|CAA30009.1| 489|Tribolium castaneum protein ( Tribolium
castaneum mRNAfor alhpa amylase 3'region. ).
Length = 489
Score = 20.6 bits (41), Expect = 8.4
Identities = 13/73 (17%), Positives = 30/73 (41%)
Frame = -1
Query: 322 DQDVENAVLDDVEVVAVIALSDYVLAGLGSLFEHRIQNLLHLLRVKRTEQQYAPDRLSET 143
D + + DD + +++D G G + EHR + + +++ + Q +
Sbjct: 347 DNNDQGPPQDDAGNLISPSINDDGTCGNGYVCEHRWRQIFNMVGFRNAVQGTGIENWWSD 406
Query: 142 GSLCVRLGEHGRG 104
G+ + G +G
Sbjct: 407 GNQQIAFGRGNKG 419
>AY695258-1|AAW21975.1| 232|Tribolium castaneum muscle segment
homeodomain protein protein.
Length = 232
Score = 20.6 bits (41), Expect = 8.4
Identities = 10/25 (40%), Positives = 15/25 (60%), Gaps = 2/25 (8%)
Frame = -1
Query: 475 GNVWRSMAPQSAGGLGP--YRCRPR 407
G++ RS +PQ++ GP RC R
Sbjct: 86 GSLXRSSSPQTSAPTGPPIVRCALR 110
Database: tribolium
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 122,585
Number of sequences in database: 336
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 122,885
Number of Sequences: 336
Number of extensions: 2797
Number of successful extensions: 12
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12
length of database: 122,585
effective HSP length: 53
effective length of database: 104,777
effective search space used: 12049355
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)
- SilkBase 1999-2023 -