Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= epV30528
(508 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC8C9.03 |cgs1||cAMP-dependent protein kinase regulatory subun... 81 1e-16
SPAC3G6.01 |hrp3||ATP-dependent DNA helicase Hrp3|Schizosaccharo... 27 1.2
SPBC1E8.05 |||conserved fungal protein|Schizosaccharomyces pombe... 27 1.6
SPCP1E11.02 |ppk38||Ark1/Prk1 family protein kinase Ppk38|Schizo... 27 2.1
SPAC637.13c |||cytoskeletal signaling protein|Schizosaccharomyce... 27 2.1
SPAC24B11.10c |chr3|cfh1|chitin synthase regulatory factor Chr3 ... 26 2.8
SPAPJ698.03c |prp12|sap130|U2 snRNP-associated protein Sap130 |S... 26 2.8
SPAC22A12.15c |bip1|bip|BiP |Schizosaccharomyces pombe|chr 1|||M... 26 2.8
SPBC713.09 |||sequence orphan|Schizosaccharomyces pombe|chr 2|||... 26 3.7
SPAC4A8.12c |sds22||protein phosphatase regulatory subunit Sds22... 26 3.7
SPBC4F6.06 |kin1||microtubule affinity-regulating kinase Kin1 |S... 26 3.7
SPAC11H11.04 |mam2||pheromone p-factor receptor|Schizosaccharomy... 25 4.9
SPAC6F12.05c |tnr3||thiamine diphosphokinase Tnr3 |Schizosacchar... 25 6.5
SPCC584.05 |sec1||SNARE binding protein Sec1|Schizosaccharomyces... 25 6.5
SPBC1539.10 |||ribosome biogenesis protein Nop16 |Schizosaccharo... 25 8.6
SPAC2G11.06 |vps4||AAA family ATPase Vps4|Schizosaccharomyces po... 25 8.6
>SPAC8C9.03 |cgs1||cAMP-dependent protein kinase regulatory subunit
Cgs1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 412
Score = 80.6 bits (190), Expect = 1e-16
Identities = 57/143 (39%), Positives = 77/143 (53%), Gaps = 12/143 (8%)
Frame = +2
Query: 44 RRKSVFAETYDPEEDDSDEGAPAVFPKSDAQRA-RLAEAVRGILLFRSLDAQQMQQVLDA 220
RR+SV E+ +P + FP D + RL +V G LF++LD + +VL+A
Sbjct: 101 RRQSVSTESMNPSAFALE--TKRTFPPKDPEDLKRLKRSVAGNFLFKNLDEEHYNEVLNA 158
Query: 221 MFEKR-SEPGEYVIRQGDDGDNFYVIENGVFDVL------VTGDDRVE----KVVHTYEG 367
M EKR E G VI QG GD FY++E G FDV +T ++ + + T
Sbjct: 159 MTEKRIGEAGVAVIVQGAVGDYFYIVEQGEFDVYKRPELNITPEEVLSSGYGNYITTISP 218
Query: 368 SGSFGELALMYNMPRAASVRAQT 436
FGELALMYN PRAASV ++T
Sbjct: 219 GEYFGELALMYNAPRAASVVSKT 241
Score = 64.1 bits (149), Expect = 1e-11
Identities = 40/108 (37%), Positives = 59/108 (54%)
Frame = +2
Query: 113 VFPKSDAQRARLAEAVRGILLFRSLDAQQMQQVLDAMFEKRSEPGEYVIRQGDDGDNFYV 292
VF + QR + + + SLD Q Q++ DA+ + G VIRQGD G+ FY+
Sbjct: 258 VFENAYRQRMLYESLLEEVPILSSLDKYQRQKIADALQTVVYQAGSIVIRQGDIGNQFYL 317
Query: 293 IENGVFDVLVTGDDRVEKVVHTYEGSGSFGELALMYNMPRAASVRAQT 436
IE+G +V+ G + VV T FGELAL++ R A+V+A+T
Sbjct: 318 IEDGEAEVVKNG----KGVVVTLTKGDYFGELALIHETVRNATVQAKT 361
>SPAC3G6.01 |hrp3||ATP-dependent DNA helicase
Hrp3|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1388
Score = 27.5 bits (58), Expect = 1.2
Identities = 17/63 (26%), Positives = 31/63 (49%)
Frame = +2
Query: 62 AETYDPEEDDSDEGAPAVFPKSDAQRARLAEAVRGILLFRSLDAQQMQQVLDAMFEKRSE 241
AE+ EE +SD+ + PK +++ + V+ + F S +++ + DA FE E
Sbjct: 111 AESVTSEESESDDSSYGGTPKKRSRQKKSNTYVQDEIRFSSRNSKGVNYNEDAYFESFEE 170
Query: 242 PGE 250
E
Sbjct: 171 EEE 173
>SPBC1E8.05 |||conserved fungal protein|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 317
Score = 27.1 bits (57), Expect = 1.6
Identities = 24/91 (26%), Positives = 41/91 (45%), Gaps = 3/91 (3%)
Frame = -2
Query: 363 SYVWTTFSTRSSPV---TRTSKTPFSMT*KLSPSSPCLITYSPGSDLFSNIASRTCCICC 193
SY T ST +P TRTS + F + +PSS + S S S +S +
Sbjct: 122 SYSGTISSTSIAPSMIGTRTSSSYFITSSSSTPSSSSSSSSSSPSSSSSKSSSSSKSSSS 181
Query: 192 ASRERNSSMPRTASARRALCASDLGNTAGAP 100
+S SS ++S++ + +S ++ +P
Sbjct: 182 SSSSSKSSSSSSSSSKSSSSSSSSSKSSASP 212
>SPCP1E11.02 |ppk38||Ark1/Prk1 family protein kinase
Ppk38|Schizosaccharomyces pombe|chr 3|||Manual
Length = 650
Score = 26.6 bits (56), Expect = 2.1
Identities = 15/46 (32%), Positives = 24/46 (52%), Gaps = 2/46 (4%)
Frame = -2
Query: 339 TRSSPVTRT--SKTPFSMT*KLSPSSPCLITYSPGSDLFSNIASRT 208
T+ +P + T P K+SP++P L T + D+FS+ A T
Sbjct: 416 TQGAPPSHTYGPPPPVQPKPKISPTTPRLSTLALADDMFSSTAKET 461
>SPAC637.13c |||cytoskeletal signaling protein|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 498
Score = 26.6 bits (56), Expect = 2.1
Identities = 12/49 (24%), Positives = 25/49 (51%)
Frame = +2
Query: 74 DPEEDDSDEGAPAVFPKSDAQRARLAEAVRGILLFRSLDAQQMQQVLDA 220
D ++DD ++ PAV +S R+++ + RS ++Q+ D+
Sbjct: 426 DDDDDDPNDFRPAVERQSSTMNTRMSQPSSAVNTNRSYGSEQIPSYADS 474
>SPAC24B11.10c |chr3|cfh1|chitin synthase regulatory factor Chr3
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 932
Score = 26.2 bits (55), Expect = 2.8
Identities = 19/65 (29%), Positives = 32/65 (49%), Gaps = 3/65 (4%)
Frame = -2
Query: 333 SSPVTRTSKTPFSMT*KLSPS---SPCLITYSPGSDLFSNIASRTCCICCASRERNSSMP 163
SSP+ R TP S ++PS P S G+ +++A+ + + + ERN SM
Sbjct: 459 SSPIMRADSTPISHNLAVTPSFSPIPQQSNKSIGNHKNTSVANVSSKVANSKFERNISMM 518
Query: 162 RTASA 148
++A
Sbjct: 519 SNSNA 523
>SPAPJ698.03c |prp12|sap130|U2 snRNP-associated protein Sap130
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1206
Score = 26.2 bits (55), Expect = 2.8
Identities = 16/55 (29%), Positives = 27/55 (49%), Gaps = 2/55 (3%)
Frame = +2
Query: 293 IENGVFDVLVTGDDRVEKVVHTYEGSGSFGELALMY--NMPRAASVRAQTAGALW 451
++ F +L TGD + K+ ++G G+ EL L Y +P A + G L+
Sbjct: 313 MKGSFFYLLQTGDGDLLKLTIEHDGQGNVVELRLKYFDTVPLAVQLNILKTGFLF 367
>SPAC22A12.15c |bip1|bip|BiP |Schizosaccharomyces pombe|chr
1|||Manual
Length = 663
Score = 26.2 bits (55), Expect = 2.8
Identities = 20/80 (25%), Positives = 37/80 (46%), Gaps = 4/80 (5%)
Frame = +2
Query: 107 PAVFPKSDAQRARLAEAVRGILLFRSLDAQQMQQVLDAMFEKRSEPGEYVIRQGDDGDNF 286
PA F + Q + A + G+ + R ++ + + + +E ++++ G F
Sbjct: 178 PAYFNDAQRQATKDAGTIAGLNVIRIVNEPTAAAIAYGLDKTDTE--KHIVVYDLGGGTF 235
Query: 287 YV----IENGVFDVLVTGDD 334
V I+NGVF+VL T D
Sbjct: 236 DVSLLSIDNGVFEVLATSGD 255
>SPBC713.09 |||sequence orphan|Schizosaccharomyces pombe|chr
2|||Manual
Length = 395
Score = 25.8 bits (54), Expect = 3.7
Identities = 21/68 (30%), Positives = 34/68 (50%), Gaps = 3/68 (4%)
Frame = +2
Query: 134 QRARLAEAVRG--ILLFRSLDAQQMQQVLDAM-FEKRSEPGEYVIRQGDDGDNFYVIENG 304
++ L EAV + + + Q+ + L+AM FE +PG + D NF VI+N
Sbjct: 320 EKQLLEEAVERYKLAMVEFAECQRRLKELEAMHFE---QPGSVTEKLFPDPTNFEVIDNV 376
Query: 305 VFDVLVTG 328
D+ +TG
Sbjct: 377 SIDLTLTG 384
>SPAC4A8.12c |sds22||protein phosphatase regulatory subunit Sds22
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 332
Score = 25.8 bits (54), Expect = 3.7
Identities = 19/63 (30%), Positives = 33/63 (52%), Gaps = 1/63 (1%)
Frame = -1
Query: 331 VSGDQDVENAVLDDVEVVAVIALSDYVLAGLGSLFEHRIQNL-LHLLRVKRTEQQYAPDR 155
+ D+D+ + V DDV+ V +I +A LG +Q+L L ++K+ E P+
Sbjct: 26 IDADEDLLDDVPDDVDCVELIQSRIQSMASLGLERFKNLQSLCLRQNQIKKIES--VPET 83
Query: 154 LSE 146
L+E
Sbjct: 84 LTE 86
>SPBC4F6.06 |kin1||microtubule affinity-regulating kinase Kin1
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 891
Score = 25.8 bits (54), Expect = 3.7
Identities = 12/29 (41%), Positives = 17/29 (58%)
Frame = +3
Query: 78 PKRMILTKEPLPCSPSRTHREPVSLRRSG 164
P R +++PLP SPSRT + + SG
Sbjct: 78 PVRSPSSRKPLPASPSRTRDHSLRVPVSG 106
>SPAC11H11.04 |mam2||pheromone p-factor receptor|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 348
Score = 25.4 bits (53), Expect = 4.9
Identities = 9/34 (26%), Positives = 20/34 (58%)
Frame = +2
Query: 338 VEKVVHTYEGSGSFGELALMYNMPRAASVRAQTA 439
++ +HTY+G S + L+ ++P ++ + TA
Sbjct: 267 IDSFIHTYDGFSSMTQCLLIISLPLSSLWASSTA 300
>SPAC6F12.05c |tnr3||thiamine diphosphokinase Tnr3
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 569
Score = 25.0 bits (52), Expect = 6.5
Identities = 10/20 (50%), Positives = 13/20 (65%)
Frame = -1
Query: 256 YVLAGLGSLFEHRIQNLLHL 197
+VL G+G +H I NL HL
Sbjct: 450 FVLCGMGGRVDHAIGNLNHL 469
>SPCC584.05 |sec1||SNARE binding protein Sec1|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 693
Score = 25.0 bits (52), Expect = 6.5
Identities = 22/91 (24%), Positives = 39/91 (42%), Gaps = 2/91 (2%)
Frame = -1
Query: 313 VENAVLDDVEVVAVIALSDYVLAGLGSLFEHRIQNLLHLLRVKRTEQQYAPDRLSETGSL 134
++N + D E + +LAGL E R Q LHL + + +L+ G++
Sbjct: 311 IDNTLFLDKERATSLNDMRSMLAGLSDFQELRDQYSLHLTMAQECMNIFEKQQLNLIGAI 370
Query: 133 --CVRLGEHGRGSFVRIILFGVISLGENGFA 47
+ G + G R +L ++ L + G A
Sbjct: 371 EQDLSTGSNVEGKVPRSVLSELLPLLDEGNA 401
>SPBC1539.10 |||ribosome biogenesis protein Nop16
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 209
Score = 24.6 bits (51), Expect = 8.6
Identities = 11/36 (30%), Positives = 21/36 (58%)
Frame = +2
Query: 188 DAQQMQQVLDAMFEKRSEPGEYVIRQGDDGDNFYVI 295
D + + LD + +K PG+ ++R+ DDG+ +I
Sbjct: 79 DRELTSEELDEL-KKSLPPGQAIVRRDDDGNIIEII 113
>SPAC2G11.06 |vps4||AAA family ATPase Vps4|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 432
Score = 24.6 bits (51), Expect = 8.6
Identities = 17/57 (29%), Positives = 27/57 (47%), Gaps = 3/57 (5%)
Frame = -1
Query: 166 APDRLSETGSLCVRLGE---HGRGSFVRIILFGVISLGENGFAPIVKARHWRLFYKI 5
A + L ET L ++L + HGR + I+L+G G++ A V F+ I
Sbjct: 137 AKEALKETVLLPIKLPQLFSHGRKPWSGILLYGPPGTGKSYLAKAVATEAGSTFFSI 193
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,117,973
Number of Sequences: 5004
Number of extensions: 44045
Number of successful extensions: 197
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 177
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 194
length of database: 2,362,478
effective HSP length: 68
effective length of database: 2,022,206
effective search space used: 202220600
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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