Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= epV30528
(508 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U39652-8|AAK82909.1| 334|Caenorhabditis elegans Protein kinase ... 107 6e-24
U39652-7|AAA80405.2| 366|Caenorhabditis elegans Protein kinase ... 107 6e-24
U39652-6|ABI18144.1| 376|Caenorhabditis elegans Protein kinase ... 107 6e-24
J05220-1|AAA27980.1| 376|Caenorhabditis elegans protein ( C.ele... 104 3e-23
U42438-4|AAM75371.1| 617|Caenorhabditis elegans Hypothetical pr... 69 1e-12
U42438-5|AAM75369.1| 581|Caenorhabditis elegans Hypothetical pr... 64 7e-11
AF067612-4|AAM98010.1| 749|Caenorhabditis elegans Egg laying de... 60 9e-10
AF067612-3|AAU05567.1| 743|Caenorhabditis elegans Egg laying de... 60 9e-10
AF067612-2|AAD36953.1| 737|Caenorhabditis elegans Egg laying de... 60 9e-10
AF067612-1|AAD36954.1| 780|Caenorhabditis elegans Egg laying de... 60 9e-10
AF067612-6|AAU05568.1| 470|Caenorhabditis elegans Egg laying de... 52 2e-07
Z19157-1|CAB63418.2| 733|Caenorhabditis elegans Hypothetical pr... 43 1e-04
D86922-1|BAA13180.1| 733|Caenorhabditis elegans cyclic nucleoti... 43 1e-04
Z93778-7|CAB07847.1| 800|Caenorhabditis elegans Hypothetical pr... 42 3e-04
Z81532-9|CAB04328.1| 800|Caenorhabditis elegans Hypothetical pr... 42 3e-04
U73476-1|AAB41492.1| 800|Caenorhabditis elegans cyclic nucleoti... 42 3e-04
Z30423-4|CAA83013.2| 1234|Caenorhabditis elegans Hypothetical pr... 41 6e-04
Z81061-5|CAB02935.4| 695|Caenorhabditis elegans Hypothetical pr... 38 0.003
AL117206-10|CAB60452.2| 258|Caenorhabditis elegans Hypothetical... 30 0.84
AC024753-9|AAF60460.1| 139|Caenorhabditis elegans Hypothetical ... 30 0.84
Z75526-3|CAA99769.1| 578|Caenorhabditis elegans Hypothetical pr... 30 1.1
U50198-2|AAA91260.2| 363|Caenorhabditis elegans Hypothetical pr... 30 1.1
AF067612-5|AAM98011.3| 195|Caenorhabditis elegans Egg laying de... 30 1.1
U41014-1|AAK32947.3| 641|Caenorhabditis elegans Hypothetical pr... 29 1.5
AF039045-2|AAO38660.2| 217|Caenorhabditis elegans Hypothetical ... 29 1.5
Z77666-8|CAJ43910.1| 493|Caenorhabditis elegans Hypothetical pr... 29 1.9
U56965-1|AAB52671.1| 661|Caenorhabditis elegans Heat shock prot... 29 1.9
M26604-1|AAA28074.1| 661|Caenorhabditis elegans protein ( C. el... 29 1.9
Z75545-1|CAB61025.1| 665|Caenorhabditis elegans Hypothetical pr... 29 2.6
AC006792-1|AAF60741.2| 642|Caenorhabditis elegans Hypothetical ... 29 2.6
AB000913-1|BAA21715.1| 665|Caenorhabditis elegans UNC-14 protein. 29 2.6
U29614-6|AAA68809.2| 378|Caenorhabditis elegans Hypothetical pr... 28 4.5
Z98866-16|CAB11565.2| 1159|Caenorhabditis elegans Hypothetical p... 27 5.9
Z92803-1|CAB07242.2| 384|Caenorhabditis elegans Hypothetical pr... 27 5.9
Z81475-11|CAB03915.1| 1820|Caenorhabditis elegans Hypothetical p... 27 5.9
Z74042-9|CAA98526.1| 325|Caenorhabditis elegans Hypothetical pr... 27 5.9
AL032627-23|CAA21551.1| 1820|Caenorhabditis elegans Hypothetical... 27 5.9
AF304126-1|AAG50239.1| 384|Caenorhabditis elegans RING and zinc... 27 5.9
AF134186-1|AAD55361.1| 1359|Caenorhabditis elegans XNP-1 protein. 27 5.9
AF000196-11|AAC24256.1| 1359|Caenorhabditis elegans Human xnp ge... 27 5.9
Z79755-3|CAB02108.1| 355|Caenorhabditis elegans Hypothetical pr... 27 7.8
Z68303-7|CAA92642.2| 445|Caenorhabditis elegans Hypothetical pr... 27 7.8
Z67738-4|CAJ43444.1| 279|Caenorhabditis elegans Hypothetical pr... 27 7.8
Z67738-3|CAA91544.2| 332|Caenorhabditis elegans Hypothetical pr... 27 7.8
U41510-8|AAK39385.1| 493|Caenorhabditis elegans Hypothetical pr... 27 7.8
AF435979-1|AAM46663.1| 445|Caenorhabditis elegans equilibrative... 27 7.8
>U39652-8|AAK82909.1| 334|Caenorhabditis elegans Protein kinase
protein 2, isoform b protein.
Length = 334
Score = 107 bits (256), Expect = 6e-24
Identities = 62/143 (43%), Positives = 78/143 (54%)
Frame = +2
Query: 23 PVARFNNRRKSVFAETYDPEEDDSDEGAPAVFPKSDAQRARLAEAVRGILLFRSLDAQQM 202
P R RR + AE P ++D E V PK DA R L A+R LLF L+ +
Sbjct: 43 PPKRSGGRRTGISAE---PIKEDDTEYKKVVIPKDDATRRSLESAMRKNLLFAHLEEDEQ 99
Query: 203 QQVLDAMFEKRSEPGEYVIRQGDDGDNFYVIENGVFDVLVTGDDRVEKVVHTYEGSGSFG 382
+ + DAMF GE +I QG++GDNFYVI+ G DV V + V T GSFG
Sbjct: 100 KTMYDAMFPVEKSAGETIIEQGEEGDNFYVIDKGTVDVYVN-----HEYVLTINEGGSFG 154
Query: 383 ELALMYNMPRAASVRAQTAGALW 451
ELAL+Y PRAA+V A+T LW
Sbjct: 155 ELALIYGTPRAATVIAKTDVKLW 177
Score = 59.7 bits (138), Expect = 1e-09
Identities = 37/102 (36%), Positives = 53/102 (51%), Gaps = 1/102 (0%)
Frame = +2
Query: 134 QRARLAEAVRGILLFRSLDAQQMQQVLDAMFEKRSEPGEYVIRQGDDGDNFYVIENGVFD 313
+R E + + + LD + V DA+ EPG +V+ QG GD F++I G +
Sbjct: 195 KRKMYDEFLSKVQILADLDQWERANVADALERCDFEPGTHVVEQGQPGDEFFIILEGEAN 254
Query: 314 VL-VTGDDRVEKVVHTYEGSGSFGELALMYNMPRAASVRAQT 436
VL DD VV S FGE+AL+ + PRAA+V A+T
Sbjct: 255 VLQKRSDDAPFDVVGHLGMSDYFGEIALLLDRPRAATVVAKT 296
>U39652-7|AAA80405.2| 366|Caenorhabditis elegans Protein kinase
protein 2, isoform a protein.
Length = 366
Score = 107 bits (256), Expect = 6e-24
Identities = 62/143 (43%), Positives = 78/143 (54%)
Frame = +2
Query: 23 PVARFNNRRKSVFAETYDPEEDDSDEGAPAVFPKSDAQRARLAEAVRGILLFRSLDAQQM 202
P R RR + AE P ++D E V PK DA R L A+R LLF L+ +
Sbjct: 75 PPKRSGGRRTGISAE---PIKEDDTEYKKVVIPKDDATRRSLESAMRKNLLFAHLEEDEQ 131
Query: 203 QQVLDAMFEKRSEPGEYVIRQGDDGDNFYVIENGVFDVLVTGDDRVEKVVHTYEGSGSFG 382
+ + DAMF GE +I QG++GDNFYVI+ G DV V + V T GSFG
Sbjct: 132 KTMYDAMFPVEKSAGETIIEQGEEGDNFYVIDKGTVDVYVN-----HEYVLTINEGGSFG 186
Query: 383 ELALMYNMPRAASVRAQTAGALW 451
ELAL+Y PRAA+V A+T LW
Sbjct: 187 ELALIYGTPRAATVIAKTDVKLW 209
Score = 59.7 bits (138), Expect = 1e-09
Identities = 37/102 (36%), Positives = 53/102 (51%), Gaps = 1/102 (0%)
Frame = +2
Query: 134 QRARLAEAVRGILLFRSLDAQQMQQVLDAMFEKRSEPGEYVIRQGDDGDNFYVIENGVFD 313
+R E + + + LD + V DA+ EPG +V+ QG GD F++I G +
Sbjct: 227 KRKMYDEFLSKVQILADLDQWERANVADALERCDFEPGTHVVEQGQPGDEFFIILEGEAN 286
Query: 314 VL-VTGDDRVEKVVHTYEGSGSFGELALMYNMPRAASVRAQT 436
VL DD VV S FGE+AL+ + PRAA+V A+T
Sbjct: 287 VLQKRSDDAPFDVVGHLGMSDYFGEIALLLDRPRAATVVAKT 328
>U39652-6|ABI18144.1| 376|Caenorhabditis elegans Protein kinase
protein 2, isoform c protein.
Length = 376
Score = 107 bits (256), Expect = 6e-24
Identities = 62/143 (43%), Positives = 78/143 (54%)
Frame = +2
Query: 23 PVARFNNRRKSVFAETYDPEEDDSDEGAPAVFPKSDAQRARLAEAVRGILLFRSLDAQQM 202
P R RR + AE P ++D E V PK DA R L A+R LLF L+ +
Sbjct: 85 PPKRSGGRRTGISAE---PIKEDDTEYKKVVIPKDDATRRSLESAMRKNLLFAHLEEDEQ 141
Query: 203 QQVLDAMFEKRSEPGEYVIRQGDDGDNFYVIENGVFDVLVTGDDRVEKVVHTYEGSGSFG 382
+ + DAMF GE +I QG++GDNFYVI+ G DV V + V T GSFG
Sbjct: 142 KTMYDAMFPVEKSAGETIIEQGEEGDNFYVIDKGTVDVYVN-----HEYVLTINEGGSFG 196
Query: 383 ELALMYNMPRAASVRAQTAGALW 451
ELAL+Y PRAA+V A+T LW
Sbjct: 197 ELALIYGTPRAATVIAKTDVKLW 219
Score = 59.7 bits (138), Expect = 1e-09
Identities = 37/102 (36%), Positives = 53/102 (51%), Gaps = 1/102 (0%)
Frame = +2
Query: 134 QRARLAEAVRGILLFRSLDAQQMQQVLDAMFEKRSEPGEYVIRQGDDGDNFYVIENGVFD 313
+R E + + + LD + V DA+ EPG +V+ QG GD F++I G +
Sbjct: 237 KRKMYDEFLSKVQILADLDQWERANVADALERCDFEPGTHVVEQGQPGDEFFIILEGEAN 296
Query: 314 VL-VTGDDRVEKVVHTYEGSGSFGELALMYNMPRAASVRAQT 436
VL DD VV S FGE+AL+ + PRAA+V A+T
Sbjct: 297 VLQKRSDDAPFDVVGHLGMSDYFGEIALLLDRPRAATVVAKT 338
>J05220-1|AAA27980.1| 376|Caenorhabditis elegans protein (
C.elegans cAMP-dependentprotein kinase subunit R mRNA,
complete cds. ).
Length = 376
Score = 104 bits (250), Expect = 3e-23
Identities = 61/143 (42%), Positives = 77/143 (53%)
Frame = +2
Query: 23 PVARFNNRRKSVFAETYDPEEDDSDEGAPAVFPKSDAQRARLAEAVRGILLFRSLDAQQM 202
P R RR + AE P ++D E V PK DA R L A+R LLF L+ +
Sbjct: 85 PPKRSGGRRTGISAE---PIKEDDTEYKKVVIPKDDATRRSLESAMRKNLLFAHLEEDEQ 141
Query: 203 QQVLDAMFEKRSEPGEYVIRQGDDGDNFYVIENGVFDVLVTGDDRVEKVVHTYEGSGSFG 382
+ + DAMF GE +I QG++GDNFYVI+ G DV V + V T GSFG
Sbjct: 142 KTMYDAMFPVEKSAGETIIEQGEEGDNFYVIDKGTVDVYVN-----HEYVLTINEGGSFG 196
Query: 383 ELALMYNMPRAASVRAQTAGALW 451
ELAL+Y PRAA+V A+ LW
Sbjct: 197 ELALIYGTPRAATVIAKIDVKLW 219
Score = 59.3 bits (137), Expect = 2e-09
Identities = 37/102 (36%), Positives = 53/102 (51%), Gaps = 1/102 (0%)
Frame = +2
Query: 134 QRARLAEAVRGILLFRSLDAQQMQQVLDAMFEKRSEPGEYVIRQGDDGDNFYVIENGVFD 313
+R E + + + LD + V DA+ EPG +V+ QG GD F++I G +
Sbjct: 237 KRKMYDEFLSKVQILADLDQWERVNVADALERCDFEPGTHVVEQGQPGDEFFIILEGEAN 296
Query: 314 VL-VTGDDRVEKVVHTYEGSGSFGELALMYNMPRAASVRAQT 436
VL DD VV S FGE+AL+ + PRAA+V A+T
Sbjct: 297 VLQKRSDDAPFDVVGHLGMSDYFGEIALLLDRPRAATVVAKT 338
>U42438-4|AAM75371.1| 617|Caenorhabditis elegans Hypothetical
protein C09G4.2c protein.
Length = 617
Score = 69.3 bits (162), Expect = 1e-12
Identities = 43/113 (38%), Positives = 61/113 (53%)
Frame = +2
Query: 113 VFPKSDAQRARLAEAVRGILLFRSLDAQQMQQVLDAMFEKRSEPGEYVIRQGDDGDNFYV 292
+ KSDA + A+R R+LDA Q++++ AM+ G +IRQGD G YV
Sbjct: 52 IIGKSDAAFETIGNALRLNSFLRNLDATQIEKISSAMYPVEVPAGAIIIRQGDLGSIMYV 111
Query: 293 IENGVFDVLVTGDDRVEKVVHTYEGSGSFGELALMYNMPRAASVRAQTAGALW 451
I+ G V V D+R V T E FGELA++++ R A+VRA + LW
Sbjct: 112 IQEG--KVQVVKDNR---FVRTMEDGALFGELAILHHCERTATVRAIESCHLW 159
>U42438-5|AAM75369.1| 581|Caenorhabditis elegans Hypothetical
protein C09G4.2a protein.
Length = 581
Score = 63.7 bits (148), Expect = 7e-11
Identities = 39/102 (38%), Positives = 56/102 (54%)
Frame = +2
Query: 146 LAEAVRGILLFRSLDAQQMQQVLDAMFEKRSEPGEYVIRQGDDGDNFYVIENGVFDVLVT 325
+ A+R R+LDA Q++++ AM+ G +IRQGD G YVI+ G V V
Sbjct: 27 IGNALRLNSFLRNLDATQIEKISSAMYPVEVPAGAIIIRQGDLGSIMYVIQEG--KVQVV 84
Query: 326 GDDRVEKVVHTYEGSGSFGELALMYNMPRAASVRAQTAGALW 451
D+R V T E FGELA++++ R A+VRA + LW
Sbjct: 85 KDNR---FVRTMEDGALFGELAILHHCERTATVRAIESCHLW 123
>AF067612-4|AAM98010.1| 749|Caenorhabditis elegans Egg laying
defective protein 4,isoform c protein.
Length = 749
Score = 60.1 bits (139), Expect = 9e-10
Identities = 35/136 (25%), Positives = 67/136 (49%)
Frame = +2
Query: 44 RRKSVFAETYDPEEDDSDEGAPAVFPKSDAQRARLAEAVRGILLFRSLDAQQMQQVLDAM 223
+R A + +P ++ + K+ + + +AV+ + L +Q+ ++++ M
Sbjct: 127 QRAKKIAVSAEPTNFENKPATLQHYNKTVGAKQMIRDAVQKNDFLKQLAKEQIIELVNCM 186
Query: 224 FEKRSEPGEYVIRQGDDGDNFYVIENGVFDVLVTGDDRVEKVVHTYEGSGSFGELALMYN 403
+E R+ G++VI++G+ GD +V+ G V R ++ GELA++YN
Sbjct: 187 YEMRARAGQWVIQEGEPGDRLFVVAEGELQV-----SREGALLGKMRAGTVMGELAILYN 241
Query: 404 MPRAASVRAQTAGALW 451
R ASV+A T LW
Sbjct: 242 CTRTASVQALTDVQLW 257
Score = 52.8 bits (121), Expect = 1e-07
Identities = 29/104 (27%), Positives = 53/104 (50%), Gaps = 1/104 (0%)
Frame = +2
Query: 134 QRARLAEAVRGILLFRSLDAQQMQQVLDAMFEKRSEPGEYVIRQGDDGDNFYVIENGVFD 313
+ ++L + + +F++L ++ ++ D M + + G Y+IRQG+ GD F+VI +G
Sbjct: 275 RHSQLMNFLTKVSIFQNLSEDRISKMADVMDQDYYDGGHYIIRQGEKGDAFFVINSGQVK 334
Query: 314 VLVTGDDRVE-KVVHTYEGSGSFGELALMYNMPRAASVRAQTAG 442
V + E + + FGE AL+ R A++ AQ G
Sbjct: 335 VTQQIEGETEPREIRVLNQGDFFGERALLGEEVRTANIIAQAPG 378
>AF067612-3|AAU05567.1| 743|Caenorhabditis elegans Egg laying
defective protein 4,isoform e protein.
Length = 743
Score = 60.1 bits (139), Expect = 9e-10
Identities = 35/136 (25%), Positives = 67/136 (49%)
Frame = +2
Query: 44 RRKSVFAETYDPEEDDSDEGAPAVFPKSDAQRARLAEAVRGILLFRSLDAQQMQQVLDAM 223
+R A + +P ++ + K+ + + +AV+ + L +Q+ ++++ M
Sbjct: 121 QRAKKIAVSAEPTNFENKPATLQHYNKTVGAKQMIRDAVQKNDFLKQLAKEQIIELVNCM 180
Query: 224 FEKRSEPGEYVIRQGDDGDNFYVIENGVFDVLVTGDDRVEKVVHTYEGSGSFGELALMYN 403
+E R+ G++VI++G+ GD +V+ G V R ++ GELA++YN
Sbjct: 181 YEMRARAGQWVIQEGEPGDRLFVVAEGELQV-----SREGALLGKMRAGTVMGELAILYN 235
Query: 404 MPRAASVRAQTAGALW 451
R ASV+A T LW
Sbjct: 236 CTRTASVQALTDVQLW 251
Score = 52.8 bits (121), Expect = 1e-07
Identities = 29/104 (27%), Positives = 53/104 (50%), Gaps = 1/104 (0%)
Frame = +2
Query: 134 QRARLAEAVRGILLFRSLDAQQMQQVLDAMFEKRSEPGEYVIRQGDDGDNFYVIENGVFD 313
+ ++L + + +F++L ++ ++ D M + + G Y+IRQG+ GD F+VI +G
Sbjct: 269 RHSQLMNFLTKVSIFQNLSEDRISKMADVMDQDYYDGGHYIIRQGEKGDAFFVINSGQVK 328
Query: 314 VLVTGDDRVE-KVVHTYEGSGSFGELALMYNMPRAASVRAQTAG 442
V + E + + FGE AL+ R A++ AQ G
Sbjct: 329 VTQQIEGETEPREIRVLNQGDFFGERALLGEEVRTANIIAQAPG 372
>AF067612-2|AAD36953.1| 737|Caenorhabditis elegans Egg laying
defective protein 4,isoform b protein.
Length = 737
Score = 60.1 bits (139), Expect = 9e-10
Identities = 35/136 (25%), Positives = 67/136 (49%)
Frame = +2
Query: 44 RRKSVFAETYDPEEDDSDEGAPAVFPKSDAQRARLAEAVRGILLFRSLDAQQMQQVLDAM 223
+R A + +P ++ + K+ + + +AV+ + L +Q+ ++++ M
Sbjct: 115 QRAKKIAVSAEPTNFENKPATLQHYNKTVGAKQMIRDAVQKNDFLKQLAKEQIIELVNCM 174
Query: 224 FEKRSEPGEYVIRQGDDGDNFYVIENGVFDVLVTGDDRVEKVVHTYEGSGSFGELALMYN 403
+E R+ G++VI++G+ GD +V+ G V R ++ GELA++YN
Sbjct: 175 YEMRARAGQWVIQEGEPGDRLFVVAEGELQV-----SREGALLGKMRAGTVMGELAILYN 229
Query: 404 MPRAASVRAQTAGALW 451
R ASV+A T LW
Sbjct: 230 CTRTASVQALTDVQLW 245
Score = 52.8 bits (121), Expect = 1e-07
Identities = 29/104 (27%), Positives = 53/104 (50%), Gaps = 1/104 (0%)
Frame = +2
Query: 134 QRARLAEAVRGILLFRSLDAQQMQQVLDAMFEKRSEPGEYVIRQGDDGDNFYVIENGVFD 313
+ ++L + + +F++L ++ ++ D M + + G Y+IRQG+ GD F+VI +G
Sbjct: 263 RHSQLMNFLTKVSIFQNLSEDRISKMADVMDQDYYDGGHYIIRQGEKGDAFFVINSGQVK 322
Query: 314 VLVTGDDRVE-KVVHTYEGSGSFGELALMYNMPRAASVRAQTAG 442
V + E + + FGE AL+ R A++ AQ G
Sbjct: 323 VTQQIEGETEPREIRVLNQGDFFGERALLGEEVRTANIIAQAPG 366
>AF067612-1|AAD36954.1| 780|Caenorhabditis elegans Egg laying
defective protein 4,isoform a protein.
Length = 780
Score = 60.1 bits (139), Expect = 9e-10
Identities = 35/136 (25%), Positives = 67/136 (49%)
Frame = +2
Query: 44 RRKSVFAETYDPEEDDSDEGAPAVFPKSDAQRARLAEAVRGILLFRSLDAQQMQQVLDAM 223
+R A + +P ++ + K+ + + +AV+ + L +Q+ ++++ M
Sbjct: 158 QRAKKIAVSAEPTNFENKPATLQHYNKTVGAKQMIRDAVQKNDFLKQLAKEQIIELVNCM 217
Query: 224 FEKRSEPGEYVIRQGDDGDNFYVIENGVFDVLVTGDDRVEKVVHTYEGSGSFGELALMYN 403
+E R+ G++VI++G+ GD +V+ G V R ++ GELA++YN
Sbjct: 218 YEMRARAGQWVIQEGEPGDRLFVVAEGELQV-----SREGALLGKMRAGTVMGELAILYN 272
Query: 404 MPRAASVRAQTAGALW 451
R ASV+A T LW
Sbjct: 273 CTRTASVQALTDVQLW 288
Score = 52.8 bits (121), Expect = 1e-07
Identities = 29/104 (27%), Positives = 53/104 (50%), Gaps = 1/104 (0%)
Frame = +2
Query: 134 QRARLAEAVRGILLFRSLDAQQMQQVLDAMFEKRSEPGEYVIRQGDDGDNFYVIENGVFD 313
+ ++L + + +F++L ++ ++ D M + + G Y+IRQG+ GD F+VI +G
Sbjct: 306 RHSQLMNFLTKVSIFQNLSEDRISKMADVMDQDYYDGGHYIIRQGEKGDAFFVINSGQVK 365
Query: 314 VLVTGDDRVE-KVVHTYEGSGSFGELALMYNMPRAASVRAQTAG 442
V + E + + FGE AL+ R A++ AQ G
Sbjct: 366 VTQQIEGETEPREIRVLNQGDFFGERALLGEEVRTANIIAQAPG 409
>AF067612-6|AAU05568.1| 470|Caenorhabditis elegans Egg laying
defective protein 4,isoform f protein.
Length = 470
Score = 52.0 bits (119), Expect = 2e-07
Identities = 28/93 (30%), Positives = 48/93 (51%), Gaps = 1/93 (1%)
Frame = +2
Query: 167 ILLFRSLDAQQMQQVLDAMFEKRSEPGEYVIRQGDDGDNFYVIENGVFDVLVTGDDRVE- 343
+ +F++L ++ ++ D M + + G Y+IRQG+ GD F+VI +G V + E
Sbjct: 7 VSIFQNLSEDRISKMADVMDQDYYDGGHYIIRQGEKGDAFFVINSGQVKVTQQIEGETEP 66
Query: 344 KVVHTYEGSGSFGELALMYNMPRAASVRAQTAG 442
+ + FGE AL+ R A++ AQ G
Sbjct: 67 REIRVLNQGDFFGERALLGEEVRTANIIAQAPG 99
>Z19157-1|CAB63418.2| 733|Caenorhabditis elegans Hypothetical
protein ZC84.2 protein.
Length = 733
Score = 42.7 bits (96), Expect = 1e-04
Identities = 21/82 (25%), Positives = 46/82 (56%)
Frame = +2
Query: 152 EAVRGILLFRSLDAQQMQQVLDAMFEKRSEPGEYVIRQGDDGDNFYVIENGVFDVLVTGD 331
E +R + +F+ +A + +++ + + PG+++ ++GD G Y+++ G V+ D
Sbjct: 486 ETLRKVRIFQDCEAGLLAELVLKLQLQVFSPGDFICKKGDIGREMYIVKRGRLQVV---D 542
Query: 332 DRVEKVVHTYEGSGSFGELALM 397
D +KV T + FGEL+++
Sbjct: 543 DDGKKVFVTLQEGSVFGELSIL 564
>D86922-1|BAA13180.1| 733|Caenorhabditis elegans cyclic
nucleotide-gated channel protein.
Length = 733
Score = 42.7 bits (96), Expect = 1e-04
Identities = 21/82 (25%), Positives = 46/82 (56%)
Frame = +2
Query: 152 EAVRGILLFRSLDAQQMQQVLDAMFEKRSEPGEYVIRQGDDGDNFYVIENGVFDVLVTGD 331
E +R + +F+ +A + +++ + + PG+++ ++GD G Y+++ G V+ D
Sbjct: 486 ETLRKVRIFQDCEAGLLAELVLKLQLQVFSPGDFICKKGDIGREMYIVKRGRLQVV---D 542
Query: 332 DRVEKVVHTYEGSGSFGELALM 397
D +KV T + FGEL+++
Sbjct: 543 DDGKKVFVTLQEGSVFGELSIL 564
>Z93778-7|CAB07847.1| 800|Caenorhabditis elegans Hypothetical
protein F36F2.5 protein.
Length = 800
Score = 41.5 bits (93), Expect = 3e-04
Identities = 26/92 (28%), Positives = 45/92 (48%), Gaps = 3/92 (3%)
Frame = +2
Query: 167 ILLFRSLDAQQMQQVLDAMFEKRSEPGEYVIRQGDDGDNFYVIENGVFDVLVTGDDRVEK 346
+ LF+ D ++ ++ + PG+ + +GD G Y+I G+ V+ G D EK
Sbjct: 536 VQLFQDCDRALLRDLVLKLRPVIFLPGDMICLKGDVGKEMYIINQGILQVV--GGDHNEK 593
Query: 347 VVHTYEGSGSFGELALMY---NMPRAASVRAQ 433
+ FGE++L+ N R AS+RA+
Sbjct: 594 IFAELAQGAVFGEISLLAIGGNNRRTASIRAK 625
>Z81532-9|CAB04328.1| 800|Caenorhabditis elegans Hypothetical
protein F36F2.5 protein.
Length = 800
Score = 41.5 bits (93), Expect = 3e-04
Identities = 26/92 (28%), Positives = 45/92 (48%), Gaps = 3/92 (3%)
Frame = +2
Query: 167 ILLFRSLDAQQMQQVLDAMFEKRSEPGEYVIRQGDDGDNFYVIENGVFDVLVTGDDRVEK 346
+ LF+ D ++ ++ + PG+ + +GD G Y+I G+ V+ G D EK
Sbjct: 536 VQLFQDCDRALLRDLVLKLRPVIFLPGDMICLKGDVGKEMYIINQGILQVV--GGDHNEK 593
Query: 347 VVHTYEGSGSFGELALMY---NMPRAASVRAQ 433
+ FGE++L+ N R AS+RA+
Sbjct: 594 IFAELAQGAVFGEISLLAIGGNNRRTASIRAK 625
>U73476-1|AAB41492.1| 800|Caenorhabditis elegans cyclic
nucleotide-gated channel protein.
Length = 800
Score = 41.5 bits (93), Expect = 3e-04
Identities = 26/92 (28%), Positives = 45/92 (48%), Gaps = 3/92 (3%)
Frame = +2
Query: 167 ILLFRSLDAQQMQQVLDAMFEKRSEPGEYVIRQGDDGDNFYVIENGVFDVLVTGDDRVEK 346
+ LF+ D ++ ++ + PG+ + +GD G Y+I G+ V+ G D EK
Sbjct: 536 VQLFQDCDRALLRDLVLKLRPVIFLPGDMICLKGDVGKEMYIINQGILQVV--GGDHNEK 593
Query: 347 VVHTYEGSGSFGELALMY---NMPRAASVRAQ 433
+ FGE++L+ N R AS+RA+
Sbjct: 594 IFAELAQGAVFGEISLLAIGGNNRRTASIRAK 625
>Z30423-4|CAA83013.2| 1234|Caenorhabditis elegans Hypothetical
protein T20G5.5 protein.
Length = 1234
Score = 40.7 bits (91), Expect = 6e-04
Identities = 23/66 (34%), Positives = 36/66 (54%)
Frame = +2
Query: 227 EKRSEPGEYVIRQGDDGDNFYVIENGVFDVLVTGDDRVEKVVHTYEGSGSFGELALMYNM 406
E+ G V RQG+ G +Y++ G +V V G K+V FG+LAL+ ++
Sbjct: 590 EQYVHAGSVVFRQGEIGVYWYIVLKGAVEVNVNG-----KIVCLLREGDDFGKLALVNDL 644
Query: 407 PRAASV 424
PRAA++
Sbjct: 645 PRAATI 650
>Z81061-5|CAB02935.4| 695|Caenorhabditis elegans Hypothetical
protein F14H8.6 protein.
Length = 695
Score = 38.3 bits (85), Expect = 0.003
Identities = 23/96 (23%), Positives = 51/96 (53%)
Frame = +2
Query: 152 EAVRGILLFRSLDAQQMQQVLDAMFEKRSEPGEYVIRQGDDGDNFYVIENGVFDVLVTGD 331
+ ++ + LF S D + + +++ + + P +Y+ ++GD G Y+++ G +V V+ D
Sbjct: 473 DTLKKVKLFESCDPRLLYELILKLQLRVYSPMDYICKKGDVGTEMYIVKEGFVEV-VSED 531
Query: 332 DRVEKVVHTYEGSGSFGELALMYNMPRAASVRAQTA 439
+ + T FGEL+++ N+P + +TA
Sbjct: 532 G--QTIFVTLPAGFVFGELSIL-NIPGNKNKNLRTA 564
>AL117206-10|CAB60452.2| 258|Caenorhabditis elegans Hypothetical
protein Y67A10A.2 protein.
Length = 258
Score = 30.3 bits (65), Expect = 0.84
Identities = 15/39 (38%), Positives = 23/39 (58%)
Frame = -2
Query: 366 PSYVWTTFSTRSSPVTRTSKTPFSMT*KLSPSSPCLITY 250
P T ++ S+ + TSKTPFS+ L+ +S CL T+
Sbjct: 144 PCTAVTVINSTSTCSSSTSKTPFSIRTPLNQASQCLSTF 182
>AC024753-9|AAF60460.1| 139|Caenorhabditis elegans Hypothetical
protein Y23H5B.2 protein.
Length = 139
Score = 30.3 bits (65), Expect = 0.84
Identities = 11/44 (25%), Positives = 21/44 (47%)
Frame = -3
Query: 173 AVCPGPPQRDGLSVRPTWGTRQGLLRQNHPLRGHKSRRKRICAD 42
+ P PP + G+ + ++G R + KS +K++C D
Sbjct: 80 SAAPAPPAKSGVPAKSAEKAKEGSQRSARLKKEQKSEKKKVCVD 123
>Z75526-3|CAA99769.1| 578|Caenorhabditis elegans Hypothetical
protein C06H2.3 protein.
Length = 578
Score = 29.9 bits (64), Expect = 1.1
Identities = 20/62 (32%), Positives = 33/62 (53%), Gaps = 3/62 (4%)
Frame = +2
Query: 62 AETYDPEEDDSDEGAPAVFPKSDAQRARLAEAVR---GILLFRSLDAQQMQQVLDAMFEK 232
+E DP +D D +PA+ PK +A + RL + GIL LD Q + +++ +F +
Sbjct: 157 SEKADPSYEDYDARSPAMLPKIEAFKQRLEDLDTWNFGILQIH-LDDQVVSKLIRNLFSR 215
Query: 233 RS 238
S
Sbjct: 216 FS 217
>U50198-2|AAA91260.2| 363|Caenorhabditis elegans Hypothetical
protein R04B3.2 protein.
Length = 363
Score = 29.9 bits (64), Expect = 1.1
Identities = 8/24 (33%), Positives = 15/24 (62%)
Frame = -1
Query: 481 CEGNVWRSMAPQSAGGLGPYRCRP 410
C+ N W++++P + GPY+ P
Sbjct: 161 CQPNFWKNVSPDPSSSCGPYKTNP 184
>AF067612-5|AAM98011.3| 195|Caenorhabditis elegans Egg laying
defective protein 4,isoform d protein.
Length = 195
Score = 29.9 bits (64), Expect = 1.1
Identities = 12/50 (24%), Positives = 28/50 (56%)
Frame = +2
Query: 134 QRARLAEAVRGILLFRSLDAQQMQQVLDAMFEKRSEPGEYVIRQGDDGDN 283
+ ++L + + +F++L ++ ++ D M + + G Y+IRQG+ N
Sbjct: 118 RHSQLMNFLTKVSIFQNLSEDRISKMADVMDQDYYDGGHYIIRQGEKVSN 167
>U41014-1|AAK32947.3| 641|Caenorhabditis elegans Hypothetical
protein C06G1.4 protein.
Length = 641
Score = 29.5 bits (63), Expect = 1.5
Identities = 15/56 (26%), Positives = 27/56 (48%)
Frame = +2
Query: 293 IENGVFDVLVTGDDRVEKVVHTYEGSGSFGELALMYNMPRAASVRAQTAGALWGHG 460
I+N ++ + GD + V + + SFGEL + S+ +Q A +W +G
Sbjct: 85 IQNTDYEKQIWGDPPLSDVQYPLQPHASFGELNSLGGQSAPWSIGSQPAHPVWSNG 140
>AF039045-2|AAO38660.2| 217|Caenorhabditis elegans Hypothetical
protein F15E11.15a protein.
Length = 217
Score = 29.5 bits (63), Expect = 1.5
Identities = 14/35 (40%), Positives = 21/35 (60%)
Frame = -2
Query: 366 PSYVWTTFSTRSSPVTRTSKTPFSMT*KLSPSSPC 262
P Y W+T ++SPV S T F++ +PS+PC
Sbjct: 20 PVYSWSTCIRKTSPVL-FSSTIFALRRMTAPSAPC 53
>Z77666-8|CAJ43910.1| 493|Caenorhabditis elegans Hypothetical
protein K08E7.5b protein.
Length = 493
Score = 29.1 bits (62), Expect = 1.9
Identities = 19/71 (26%), Positives = 32/71 (45%), Gaps = 2/71 (2%)
Frame = -2
Query: 387 SSPNEPEPSYVWTTFSTRSSPVTRTSKTPFSMT*KLSPSSPCLITYSPGSDLFSNIA--S 214
++P E E V + ST+ S +++ P +++ S IT G D + S
Sbjct: 85 TTPVEEEKVKVSPSSSTKES-FENSAREPVEYEQRITSESSKGITAVTGKDFMKKLGRKS 143
Query: 213 RTCCICCASRE 181
TCC CC ++
Sbjct: 144 PTCCSCCDEKQ 154
>U56965-1|AAB52671.1| 661|Caenorhabditis elegans Heat shock protein
protein 3 protein.
Length = 661
Score = 29.1 bits (62), Expect = 1.9
Identities = 27/96 (28%), Positives = 42/96 (43%), Gaps = 5/96 (5%)
Frame = +2
Query: 62 AETY-DPEEDDSDEGAPAVFPKSDAQRARLAEAVRGILLFRSLDAQQMQQVLDAMFEKRS 238
AE+Y E ++ PA F + Q + A + G+ + R ++ + + +K
Sbjct: 162 AESYLGKEVKNAVVTVPAYFNDAQRQATKDAGTIAGLNVVRIINEPTAAAIAYGLDKKDG 221
Query: 239 EPGEYVIRQGDDGDNFYV----IENGVFDVLVTGDD 334
E V G G F V I+NGVF+VL T D
Sbjct: 222 ERNILVFDLG--GGTFDVSMLTIDNGVFEVLATNGD 255
>M26604-1|AAA28074.1| 661|Caenorhabditis elegans protein ( C.
elegans BiP (hsp3)gene, complete cds. ).
Length = 661
Score = 29.1 bits (62), Expect = 1.9
Identities = 27/96 (28%), Positives = 42/96 (43%), Gaps = 5/96 (5%)
Frame = +2
Query: 62 AETY-DPEEDDSDEGAPAVFPKSDAQRARLAEAVRGILLFRSLDAQQMQQVLDAMFEKRS 238
AE+Y E ++ PA F + Q + A + G+ + R ++ + + +K
Sbjct: 162 AESYLGKEVKNAVVTVPAYFNDAQRQATKDAGTIAGLNVVRIINEPTAAAIAYGLDKKDG 221
Query: 239 EPGEYVIRQGDDGDNFYV----IENGVFDVLVTGDD 334
E V G G F V I+NGVF+VL T D
Sbjct: 222 ERNILVFDLG--GGTFDVSMLTIDNGVFEVLATNGD 255
>Z75545-1|CAB61025.1| 665|Caenorhabditis elegans Hypothetical
protein K10D3.2 protein.
Length = 665
Score = 28.7 bits (61), Expect = 2.6
Identities = 14/36 (38%), Positives = 22/36 (61%)
Frame = -2
Query: 441 PAVWARTDAARGMLYIRASSPNEPEPSYVWTTFSTR 334
P VWA+T ++ +L AS+P + S+ TT +TR
Sbjct: 340 PPVWAQTAQSKTVLCDCASTPTDTNFSFAPTTSTTR 375
>AC006792-1|AAF60741.2| 642|Caenorhabditis elegans Hypothetical
protein Y50C1A.1 protein.
Length = 642
Score = 28.7 bits (61), Expect = 2.6
Identities = 12/32 (37%), Positives = 19/32 (59%)
Frame = +3
Query: 105 PLPCSPSRTHREPVSLRRSGAYCCSVLLTRSK 200
PL C PS+ HR P+ L A+ ++L R++
Sbjct: 273 PLECPPSQCHRSPLVLCYDSAHFSPLVLMRTE 304
>AB000913-1|BAA21715.1| 665|Caenorhabditis elegans UNC-14 protein.
Length = 665
Score = 28.7 bits (61), Expect = 2.6
Identities = 14/36 (38%), Positives = 22/36 (61%)
Frame = -2
Query: 441 PAVWARTDAARGMLYIRASSPNEPEPSYVWTTFSTR 334
P VWA+T ++ +L AS+P + S+ TT +TR
Sbjct: 340 PPVWAQTAQSKTVLCDCASTPTDTNFSFAPTTSTTR 375
>U29614-6|AAA68809.2| 378|Caenorhabditis elegans Hypothetical
protein F18E9.3 protein.
Length = 378
Score = 27.9 bits (59), Expect = 4.5
Identities = 18/59 (30%), Positives = 23/59 (38%)
Frame = +3
Query: 330 TTASKRWSTHTKVPVRLANWP*CTTCRGRHLYGPRPPALCGAMDRHTFPSHXAQERIQE 506
TT + +T T+ P A W TT R + GPR P P QE I +
Sbjct: 224 TTTTPTPTTTTQSPNTRAQWWKTTTSASRWVAGPRHPPRFNQNQNWKHPIRKLQETISQ 282
>Z98866-16|CAB11565.2| 1159|Caenorhabditis elegans Hypothetical
protein Y49E10.19 protein.
Length = 1159
Score = 27.5 bits (58), Expect = 5.9
Identities = 11/49 (22%), Positives = 25/49 (51%)
Frame = +2
Query: 62 AETYDPEEDDSDEGAPAVFPKSDAQRARLAEAVRGILLFRSLDAQQMQQ 208
+E Y+PEE++ D+ A FP + R ++ + +R + + ++
Sbjct: 671 SEPYEPEEEEDDD-ATTQFPVPERSRKSSSQLAYSVSFYRKIQRDRNEE 718
>Z92803-1|CAB07242.2| 384|Caenorhabditis elegans Hypothetical
protein K01G5.1 protein.
Length = 384
Score = 27.5 bits (58), Expect = 5.9
Identities = 11/32 (34%), Positives = 18/32 (56%)
Frame = +2
Query: 74 DPEEDDSDEGAPAVFPKSDAQRARLAEAVRGI 169
+PEE ++D P KSD ++ + E V G+
Sbjct: 336 EPEEPENDSNVPEAEEKSDEEQEIMMEDVEGL 367
>Z81475-11|CAB03915.1| 1820|Caenorhabditis elegans Hypothetical
protein C24H11.7 protein.
Length = 1820
Score = 27.5 bits (58), Expect = 5.9
Identities = 18/76 (23%), Positives = 29/76 (38%)
Frame = -1
Query: 232 LFEHRIQNLLHLLRVKRTEQQYAPDRLSETGSLCVRLGEHGRGSFVRIILFGVISLGENG 53
L E + LL + D + + S+ +RL F R I FG+ L
Sbjct: 1195 LVERAVVGLLRVANRNLFRDNTVSDDVLHSLSMLLRLSPKALFIFSRQIAFGLYELIRAN 1254
Query: 52 FAPIVKARHWRLFYKI 5
A + K HW + + +
Sbjct: 1255 AANVHKKEHWAVLFAL 1270
>Z74042-9|CAA98526.1| 325|Caenorhabditis elegans Hypothetical
protein T11F9.10 protein.
Length = 325
Score = 27.5 bits (58), Expect = 5.9
Identities = 14/28 (50%), Positives = 16/28 (57%), Gaps = 3/28 (10%)
Frame = -3
Query: 416 PPAAC--CTSGPVRQTN-RNLRMCGPPF 342
PP +C CTS R T R +R CGP F
Sbjct: 28 PPTSCATCTSNRPRCTPPRRIRQCGPKF 55
>AL032627-23|CAA21551.1| 1820|Caenorhabditis elegans Hypothetical
protein C24H11.7 protein.
Length = 1820
Score = 27.5 bits (58), Expect = 5.9
Identities = 18/76 (23%), Positives = 29/76 (38%)
Frame = -1
Query: 232 LFEHRIQNLLHLLRVKRTEQQYAPDRLSETGSLCVRLGEHGRGSFVRIILFGVISLGENG 53
L E + LL + D + + S+ +RL F R I FG+ L
Sbjct: 1195 LVERAVVGLLRVANRNLFRDNTVSDDVLHSLSMLLRLSPKALFIFSRQIAFGLYELIRAN 1254
Query: 52 FAPIVKARHWRLFYKI 5
A + K HW + + +
Sbjct: 1255 AANVHKKEHWAVLFAL 1270
>AF304126-1|AAG50239.1| 384|Caenorhabditis elegans RING and zinc
finger protein protein.
Length = 384
Score = 27.5 bits (58), Expect = 5.9
Identities = 11/32 (34%), Positives = 18/32 (56%)
Frame = +2
Query: 74 DPEEDDSDEGAPAVFPKSDAQRARLAEAVRGI 169
+PEE ++D P KSD ++ + E V G+
Sbjct: 336 EPEEPENDSNVPEAEEKSDEEQEIMMEDVEGL 367
>AF134186-1|AAD55361.1| 1359|Caenorhabditis elegans XNP-1 protein.
Length = 1359
Score = 27.5 bits (58), Expect = 5.9
Identities = 13/45 (28%), Positives = 23/45 (51%)
Frame = +2
Query: 17 KPPVARFNNRRKSVFAETYDPEEDDSDEGAPAVFPKSDAQRARLA 151
KP + + ++K F + D +E+D ++ A A+ Q RLA
Sbjct: 866 KPEIKKTAPQKKRKFLNSDDEDEEDGEDTAMAILQDGIRQSKRLA 910
>AF000196-11|AAC24256.1| 1359|Caenorhabditis elegans Human xnp gene
related protein 1 protein.
Length = 1359
Score = 27.5 bits (58), Expect = 5.9
Identities = 13/45 (28%), Positives = 23/45 (51%)
Frame = +2
Query: 17 KPPVARFNNRRKSVFAETYDPEEDDSDEGAPAVFPKSDAQRARLA 151
KP + + ++K F + D +E+D ++ A A+ Q RLA
Sbjct: 866 KPEIKKTAPQKKRKFLNSDDEDEEDGEDTAMAILQDGIRQSKRLA 910
>Z79755-3|CAB02108.1| 355|Caenorhabditis elegans Hypothetical
protein F43G9.4 protein.
Length = 355
Score = 27.1 bits (57), Expect = 7.8
Identities = 18/73 (24%), Positives = 35/73 (47%)
Frame = +2
Query: 11 VKKPPVARFNNRRKSVFAETYDPEEDDSDEGAPAVFPKSDAQRARLAEAVRGILLFRSLD 190
V K + R+K V +E + EEDD D +P S ++R+ + + + +
Sbjct: 125 VTKNKTGKPEKRKKKVDSEQQENEEDDEDLMSPVSKKPSSSERSTPSGSQQQPPITEE-Q 183
Query: 191 AQQMQQVLDAMFE 229
++ M +++D FE
Sbjct: 184 SKSMMKMIDDRFE 196
>Z68303-7|CAA92642.2| 445|Caenorhabditis elegans Hypothetical
protein ZK809.4 protein.
Length = 445
Score = 27.1 bits (57), Expect = 7.8
Identities = 13/30 (43%), Positives = 16/30 (53%)
Frame = +2
Query: 365 GSGSFGELALMYNMPRAASVRAQTAGALWG 454
GSG F LA+MY +AQ AG + G
Sbjct: 393 GSGYFSGLAMMYTSKTVDPSKAQVAGMMAG 422
>Z67738-4|CAJ43444.1| 279|Caenorhabditis elegans Hypothetical
protein W03G11.1b protein.
Length = 279
Score = 27.1 bits (57), Expect = 7.8
Identities = 16/51 (31%), Positives = 23/51 (45%)
Frame = -3
Query: 179 GTAVCPGPPQRDGLSVRPTWGTRQGLLRQNHPLRGHKSRRKRICADC*SAP 27
G+A PGPP DG + + R G ++ +K + C DC AP
Sbjct: 89 GSAGPPGPPGFDGSAGKDGSNGRPGNPGEDADGDDYKPDASQFCFDCPEAP 139
>Z67738-3|CAA91544.2| 332|Caenorhabditis elegans Hypothetical
protein W03G11.1a protein.
Length = 332
Score = 27.1 bits (57), Expect = 7.8
Identities = 16/51 (31%), Positives = 23/51 (45%)
Frame = -3
Query: 179 GTAVCPGPPQRDGLSVRPTWGTRQGLLRQNHPLRGHKSRRKRICADC*SAP 27
G+A PGPP DG + + R G ++ +K + C DC AP
Sbjct: 142 GSAGPPGPPGFDGSAGKDGSNGRPGNPGEDADGDDYKPDASQFCFDCPEAP 192
>U41510-8|AAK39385.1| 493|Caenorhabditis elegans Hypothetical
protein ZC449.5 protein.
Length = 493
Score = 27.1 bits (57), Expect = 7.8
Identities = 11/22 (50%), Positives = 16/22 (72%)
Frame = +2
Query: 47 RKSVFAETYDPEEDDSDEGAPA 112
+K++F+ D +EDD DEGA A
Sbjct: 363 KKTLFSGPPDSDEDDDDEGAGA 384
>AF435979-1|AAM46663.1| 445|Caenorhabditis elegans equilibrative
nucleoside transporter1 protein.
Length = 445
Score = 27.1 bits (57), Expect = 7.8
Identities = 13/30 (43%), Positives = 16/30 (53%)
Frame = +2
Query: 365 GSGSFGELALMYNMPRAASVRAQTAGALWG 454
GSG F LA+MY +AQ AG + G
Sbjct: 393 GSGYFSGLAMMYTSKTVDPSKAQVAGMMAG 422
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,456,354
Number of Sequences: 27780
Number of extensions: 273539
Number of successful extensions: 1325
Number of sequences better than 10.0: 46
Number of HSP's better than 10.0 without gapping: 1207
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1305
length of database: 12,740,198
effective HSP length: 76
effective length of database: 10,628,918
effective search space used: 977860456
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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