Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= epV30528
(508 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At3g02850.1 68416.m00277 stelar K+ outward rectifier (SKOR) / po... 53 1e-07
At5g37500.1 68418.m04516 guard cell outward rectifying K+ channe... 48 3e-06
At2g26650.1 68415.m03197 potassium channel protein 1 (AKT1) iden... 42 2e-04
At2g24610.1 68415.m02940 cyclic nucleotide-regulated ion channel... 37 0.007
At4g22200.1 68417.m03209 potassium channel protein 2 (AKT2) (AKT... 36 0.021
At5g53130.1 68418.m06604 cyclic nucleotide-regulated ion channel... 35 0.036
At4g32650.2 68417.m04648 inward rectifying potassium channel, pu... 34 0.048
At4g32650.1 68417.m04647 inward rectifying potassium channel, pu... 34 0.048
At2g28260.1 68415.m03430 cyclic nucleotide-regulated ion channel... 32 0.19
At1g31150.1 68414.m03811 expressed protein EST gb|Z33866 comes f... 32 0.26
At5g14870.1 68418.m01744 cyclic nucleotide-regulated ion channel... 31 0.34
At4g30360.1 68417.m04314 cyclic nucleotide-regulated ion channel... 31 0.45
At2g40475.1 68415.m04995 expressed protein 31 0.45
At1g01710.1 68414.m00089 acyl-CoA thioesterase family protein co... 31 0.45
At1g19780.1 68414.m02473 cyclic nucleotide-regulated ion channel... 30 0.78
At1g15990.1 68414.m01918 cyclic nucleotide-regulated ion channel... 30 0.78
At1g01340.1 68414.m00049 cyclic nucleotide-regulated ion channel... 30 0.78
At2g28690.1 68415.m03487 expressed protein 30 1.0
At1g09080.1 68414.m01013 luminal binding protein 3 (BiP-3) (BP3)... 29 1.4
At4g00510.1 68417.m00070 cyclic nucleotide-binding domain-contai... 29 1.8
At3g50580.1 68416.m05532 proline-rich family protein contains pr... 29 1.8
At1g77460.1 68414.m09020 C2 domain-containing protein / armadill... 29 1.8
At5g22170.1 68418.m02581 hypothetical protein 29 2.4
At3g48010.1 68416.m05234 cyclic nucleotide-regulated ion channel... 29 2.4
At3g08670.1 68416.m01007 expressed protein 29 2.4
At2g19440.1 68415.m02269 glycosyl hydrolase family 17 protein si... 28 3.1
At5g42020.2 68418.m05116 luminal binding protein 2 (BiP-2) (BP2)... 28 4.2
At5g42020.1 68418.m05115 luminal binding protein 2 (BiP-2) (BP2)... 28 4.2
At5g40590.1 68418.m04926 DC1 domain-containing protein predicted... 28 4.2
At5g28540.1 68418.m03480 luminal binding protein 1 (BiP-1) (BP1)... 28 4.2
At4g33480.1 68417.m04755 expressed protein 27 5.5
At1g62760.1 68414.m07083 invertase/pectin methylesterase inhibit... 27 5.5
At1g51915.1 68414.m05852 cryptdin protein-related contains weak ... 27 5.5
At1g08400.1 68414.m00929 chromosome structural maintenance prote... 27 5.5
At5g18220.1 68418.m02138 glycosyl hydrolase family 17 protein si... 27 7.3
At2g17740.1 68415.m02055 DC1 domain-containing protein 27 7.3
At1g64760.1 68414.m07343 glycosyl hydrolase family 17 protein si... 27 7.3
At1g18860.1 68414.m02348 WRKY family transcription factor contai... 27 7.3
At4g29050.1 68417.m04155 lectin protein kinase family protein co... 27 9.6
At3g04010.1 68416.m00422 glycosyl hydrolase family 17 protein si... 27 9.6
At1g80070.1 68414.m09373 splicing factor, putative strong simila... 27 9.6
At1g44120.1 68414.m05096 C2 domain-containing protein / armadill... 27 9.6
At1g20110.1 68414.m02516 zinc finger (FYVE type) family protein ... 27 9.6
At1g03060.1 68414.m00280 WD-40 repeat family protein / beige-rel... 27 9.6
>At3g02850.1 68416.m00277 stelar K+ outward rectifier (SKOR) /
potassium channel protein identical to SKOR [Arabidopsis
thaliana] gi|3810676|emb|CAA11280; member of the 1 pore,
6 transmembrane (1P/6TM) Shaker K+ channel family,
PMID:11500563
Length = 828
Score = 52.8 bits (121), Expect = 1e-07
Identities = 25/90 (27%), Positives = 50/90 (55%)
Frame = +2
Query: 158 VRGILLFRSLDAQQMQQVLDAMFEKRSEPGEYVIRQGDDGDNFYVIENGVFDVLVTGDDR 337
+ + LFR ++ + Q++ + E+ PGE ++ QG D Y + +GV + + D
Sbjct: 398 IEKVPLFRGCSSEFINQIVIRLHEEFFLPGEVIMEQGSVVDQLYFVCHGVLEEIGITKDG 457
Query: 338 VEKVVHTYEGSGSFGELALMYNMPRAASVR 427
E++V + SFGE++++ N+P+ +VR
Sbjct: 458 SEEIVAVLQPDHSFGEISILCNIPQPYTVR 487
>At5g37500.1 68418.m04516 guard cell outward rectifying K+ channel
(GORK) identical to guard cell outward rectifying K+
channel [Arabidopsis thaliana] gi|11414742|emb|CAC17380;
member of the 1 pore, 6 transmembrane (1P/6TM) Shaker K+
channel family, PMID:11500563
Length = 820
Score = 48.4 bits (110), Expect = 3e-06
Identities = 24/90 (26%), Positives = 49/90 (54%)
Frame = +2
Query: 158 VRGILLFRSLDAQQMQQVLDAMFEKRSEPGEYVIRQGDDGDNFYVIENGVFDVLVTGDDR 337
++ + LF+ + + Q++ + E+ PGE + QG+ D+ Y + G+ + LVT D
Sbjct: 381 IKKVPLFKGCSTEFINQIVIRLHEEYFLPGEVITEQGNVVDHLYFVCEGLLEALVTKTDG 440
Query: 338 VEKVVHTYEGSGSFGELALMYNMPRAASVR 427
E+ V SFG+++++ N+ + +VR
Sbjct: 441 SEESVTLLGPHTSFGDISIICNISQPFTVR 470
>At2g26650.1 68415.m03197 potassium channel protein 1 (AKT1)
identical to AKT1 [Arabidopsis thaliana]
gi|563112|gb|AAA96810; member of the 1 pore, 6
transmembrane (1P/6TM- Shaker-type) K+ channel family,
PMID:11500563
Length = 857
Score = 42.3 bits (95), Expect = 2e-04
Identities = 25/89 (28%), Positives = 43/89 (48%)
Frame = +2
Query: 167 ILLFRSLDAQQMQQVLDAMFEKRSEPGEYVIRQGDDGDNFYVIENGVFDVLVTGDDRVEK 346
+ LFR + + Q++ M + P E VI Q + +FY++ NG D LV D E
Sbjct: 370 VYLFRGVSNDLLFQLVSEMKAEYFPPKEDVILQNEAPTDFYILVNGTAD-LVDVDTGTES 428
Query: 347 VVHTYEGSGSFGELALMYNMPRAASVRAQ 433
+V + GE+ ++ P+ +VR +
Sbjct: 429 IVREVKAGDIIGEIGVLCYRPQLFTVRTK 457
>At2g24610.1 68415.m02940 cyclic nucleotide-regulated ion channel,
putative (CNGC14) similar to cyclic nucleotide and
calmodulin-regulated ion channel (GI:4581205)
[Arabidopsis thaliana]
Length = 726
Score = 37.1 bits (82), Expect = 0.007
Identities = 19/72 (26%), Positives = 31/72 (43%)
Frame = +2
Query: 122 KSDAQRARLAEAVRGILLFRSLDAQQMQQVLDAMFEKRSEPGEYVIRQGDDGDNFYVIEN 301
+ D QR + VR + LF +D Q + + + + S G Y++R+GD I
Sbjct: 464 RRDIQRHLCLDLVRRVPLFAQMDDQLLDAICERLASSLSTQGNYIVREGDPVTEMLFIIR 523
Query: 302 GVFDVLVTGDDR 337
G + T R
Sbjct: 524 GKLESSTTNGGR 535
>At4g22200.1 68417.m03209 potassium channel protein 2 (AKT2) (AKT3)
identical to potassium channel [Arabidopsis thaliana]
gi|1100898|gb|AAA97865; Note: also identical to AKT3
[Arabidopsis thaliana] gi|1172218|gb|AAA96153, which is
a truncated version of AKT2, PMID:10852932; member of
the 1 pore, 6 transmembrane (1P/6TM- Shaker-type) K+
channel family, PMID:11500563; identical to cDNA
inward-rectifying K+ channel (AKT3) GI:1172219
Length = 802
Score = 35.5 bits (78), Expect = 0.021
Identities = 22/98 (22%), Positives = 49/98 (50%)
Frame = +2
Query: 155 AVRGILLFRSLDAQQMQQVLDAMFEKRSEPGEYVIRQGDDGDNFYVIENGVFDVLVTGDD 334
+V + LF+ + + + ++ M + P E VI Q + D+ Y+I +G +++ + +
Sbjct: 388 SVEKVYLFKGVSREILLLLVSKMKAEYIPPREDVIMQNEAPDDVYIIVSGEVEIIDSEME 447
Query: 335 RVEKVVHTYEGSGSFGELALMYNMPRAASVRAQTAGAL 448
R E V+ T FGE+ + P++ + + ++ L
Sbjct: 448 R-ESVLGTLRCGDIFGEVGALCCRPQSYTFQTKSLSQL 484
>At5g53130.1 68418.m06604 cyclic nucleotide-regulated ion channel /
cyclic nucleotide-gated channel (CNGC1) almost identical
to cyclic nucleotide-regulated ion channel 1 pir:T51354,
GI:11357236 from [Arabidopsis thaliana]
Length = 716
Score = 34.7 bits (76), Expect = 0.036
Identities = 29/121 (23%), Positives = 51/121 (42%), Gaps = 2/121 (1%)
Frame = +2
Query: 65 ETYDPEEDDSDEGAPAVFPKSDAQRARLAEAVRGILLFRSLDAQQMQQVLDAMFEKRSEP 244
ET +E++ P + + LA +R + +F +D Q + + D +
Sbjct: 451 ETRGVDEENLLSNLPKDLRRDIKRHLCLALLMR-VPMFEKMDEQLLDALCDRLQPVLYTE 509
Query: 245 GEYVIRQGDDGDNFYVIENGVFDVLVTGDDRVEKVVHTYEGSGSF-GELALMYNM-PRAA 418
Y++R+GD D I G + T R + Y G+G F GE L + + P ++
Sbjct: 510 ESYIVREGDPVDEMLFIMRGKLLTITTNGGRTGFLNSEYLGAGDFCGEELLTWALDPHSS 569
Query: 419 S 421
S
Sbjct: 570 S 570
>At4g32650.2 68417.m04648 inward rectifying potassium channel,
putative (KAT3) (AKT4) (KC1) identical to K+ inward
rectifying channel protein KC1 [Arabidopsis thaliana]
gi|4090537|gb|AAC98810; similar to (KAT1) K+ channel
[Arabidopsis thaliana] gi|1165000|emb|CAA63601;
Shaker-type channel (1P/6TM), PMID:11500563
Length = 597
Score = 34.3 bits (75), Expect = 0.048
Identities = 23/88 (26%), Positives = 45/88 (51%), Gaps = 1/88 (1%)
Frame = +2
Query: 173 LFRSLDAQQMQQVLDAMFEKRSEPGEYVIRQGDDGDNFYVIENGVFDVLVTGDDRVEKVV 352
LF+ + Q++ + + P +I Q + +FYVI +G D++ + V + V
Sbjct: 406 LFKGFPEGLLVQLVSQIQAEYFPPKMEIILQNEIPTDFYVIVSGGVDIIAS--KGVSEQV 463
Query: 353 HTYEGSGSF-GELALMYNMPRAASVRAQ 433
G GS GE+ +++N+P+ +VR +
Sbjct: 464 LAKLGPGSMAGEIGVVFNIPQPFTVRTR 491
>At4g32650.1 68417.m04647 inward rectifying potassium channel,
putative (KAT3) (AKT4) (KC1) identical to K+ inward
rectifying channel protein KC1 [Arabidopsis thaliana]
gi|4090537|gb|AAC98810; similar to (KAT1) K+ channel
[Arabidopsis thaliana] gi|1165000|emb|CAA63601;
Shaker-type channel (1P/6TM), PMID:11500563
Length = 662
Score = 34.3 bits (75), Expect = 0.048
Identities = 23/88 (26%), Positives = 45/88 (51%), Gaps = 1/88 (1%)
Frame = +2
Query: 173 LFRSLDAQQMQQVLDAMFEKRSEPGEYVIRQGDDGDNFYVIENGVFDVLVTGDDRVEKVV 352
LF+ + Q++ + + P +I Q + +FYVI +G D++ + V + V
Sbjct: 406 LFKGFPEGLLVQLVSQIQAEYFPPKMEIILQNEIPTDFYVIVSGGVDIIAS--KGVSEQV 463
Query: 353 HTYEGSGSF-GELALMYNMPRAASVRAQ 433
G GS GE+ +++N+P+ +VR +
Sbjct: 464 LAKLGPGSMAGEIGVVFNIPQPFTVRTR 491
>At2g28260.1 68415.m03430 cyclic nucleotide-regulated ion channel,
putative (CNGC15) similar to cyclic nucleotide and
calmodulin-regulated ion channel (cngc6) GI:4581207 from
[Arabidopsis thaliana]
Length = 678
Score = 32.3 bits (70), Expect = 0.19
Identities = 24/99 (24%), Positives = 41/99 (41%), Gaps = 2/99 (2%)
Frame = +2
Query: 122 KSDAQRARLAEAVRGILLFRSLDAQQMQQVLDAMFEKRSEPGEYVIRQGDDGDNFYVIEN 301
+ D +R + VR + LF +D + + + + + G +++R+GD + I
Sbjct: 454 RRDIKRHLCFDLVRRVPLFDQMDERMLDAICERLKPALCTEGTFLVREGDPVNEMLFIIR 513
Query: 302 GVFDVLVTGDDRVEKVVHTYEGSGSF-GELALMYNM-PR 412
G D T R G G F GE L + + PR
Sbjct: 514 GHLDSYTTNGGRTGFFNSCLIGPGDFCGEELLTWALDPR 552
>At1g31150.1 68414.m03811 expressed protein EST gb|Z33866 comes from
this gene
Length = 673
Score = 31.9 bits (69), Expect = 0.26
Identities = 14/36 (38%), Positives = 23/36 (63%), Gaps = 1/36 (2%)
Frame = -1
Query: 229 FEHRIQNLLHLLRV-KRTEQQYAPDRLSETGSLCVR 125
FEH++++ LH+ R K+ +QQ D+L E +C R
Sbjct: 607 FEHQLESSLHIARAHKQEQQQQQTDKLKENLMVCQR 642
>At5g14870.1 68418.m01744 cyclic nucleotide-regulated ion channel,
putative (CNGC18) similar to cyclic nucleotide and
calmodulin-regulated ion channel (cngc6) GI:4581207 from
[Arabidopsis thaliana]
Length = 706
Score = 31.5 bits (68), Expect = 0.34
Identities = 16/72 (22%), Positives = 28/72 (38%)
Frame = +2
Query: 122 KSDAQRARLAEAVRGILLFRSLDAQQMQQVLDAMFEKRSEPGEYVIRQGDDGDNFYVIEN 301
+ + QR VR + F +D Q + + + S G Y+ R+GD + +
Sbjct: 432 RREIQRHLCLSLVRRVPFFSQMDDQLLDAICGCLVSSLSTAGTYIFREGDPVNEMLFVIR 491
Query: 302 GVFDVLVTGDDR 337
G + T R
Sbjct: 492 GQIESSTTNGGR 503
>At4g30360.1 68417.m04314 cyclic nucleotide-regulated ion channel,
putative (CNGC17) similar to cyclic nucleotide and
calmodulin-regulated ion channel cngc5 GI:4581205 from
[Arabidopsis thaliana]
Length = 720
Score = 31.1 bits (67), Expect = 0.45
Identities = 13/50 (26%), Positives = 24/50 (48%)
Frame = +2
Query: 122 KSDAQRARLAEAVRGILLFRSLDAQQMQQVLDAMFEKRSEPGEYVIRQGD 271
+ D QR + VR + F +D Q + + + + G Y++R+GD
Sbjct: 464 RRDIQRHLCLDLVRRVPFFSQMDDQLLDAICERLVSSLCTEGTYLVREGD 513
>At2g40475.1 68415.m04995 expressed protein
Length = 193
Score = 31.1 bits (67), Expect = 0.45
Identities = 22/79 (27%), Positives = 35/79 (44%)
Frame = -2
Query: 366 PSYVWTTFSTRSSPVTRTSKTPFSMT*KLSPSSPCLITYSPGSDLFSNIASRTCCICCAS 187
PS+ W++ S+ SS +S P + + C +Y D ++S C
Sbjct: 104 PSFSWSSASSSSSSSYSSSSPPSKVEHRPRKCYSCSRSYVKEDDEEEIVSSSPTSTLCYK 163
Query: 186 RERNSSMPRTASARRALCA 130
R +SSM S +RALC+
Sbjct: 164 RGFSSSM---GSMKRALCS 179
>At1g01710.1 68414.m00089 acyl-CoA thioesterase family protein
contains Pfam profiles: PF02551 acyl-CoA thioesterase,
PF00027 cyclic nucleotide-binding domain
Length = 427
Score = 31.1 bits (67), Expect = 0.45
Identities = 16/63 (25%), Positives = 31/63 (49%)
Frame = +2
Query: 146 LAEAVRGILLFRSLDAQQMQQVLDAMFEKRSEPGEYVIRQGDDGDNFYVIENGVFDVLVT 325
+ E + + L + L + ++++ + KR G+YV+R+ D Y I G + V+
Sbjct: 6 VVEFLGNVPLLQKLPSSSLKKIAQVVVPKRYGKGDYVVREDQTWDGCYFILQG--EAQVS 63
Query: 326 GDD 334
G D
Sbjct: 64 GPD 66
>At1g19780.1 68414.m02473 cyclic nucleotide-regulated ion channel,
putative (CNGC8) similar to cyclic nucleotide and
calmodulin-regulated ion channel GI:4581207 from
(Arabidopsis thaliana)
Length = 728
Score = 30.3 bits (65), Expect = 0.78
Identities = 19/91 (20%), Positives = 39/91 (42%)
Frame = +2
Query: 65 ETYDPEEDDSDEGAPAVFPKSDAQRARLAEAVRGILLFRSLDAQQMQQVLDAMFEKRSEP 244
ET +E++ + P + D +R VR + LF ++D + + + + +
Sbjct: 448 ETRGVDEENIVQSLPKDL-RRDIKRHLCLNLVRRVPLFANMDERLLDAICERLKPSLYTE 506
Query: 245 GEYVIRQGDDGDNFYVIENGVFDVLVTGDDR 337
Y++R+GD + I G + + T R
Sbjct: 507 STYIVREGDPVNEMLFIIRGRLESVTTDGGR 537
>At1g15990.1 68414.m01918 cyclic nucleotide-regulated ion channel,
putative (CNGC7) similar to cyclic nucleotide and
calmodulin-regulated ion channel protein GI:4581207 from
[Arabidopsis thaliana]
Length = 709
Score = 30.3 bits (65), Expect = 0.78
Identities = 19/91 (20%), Positives = 39/91 (42%)
Frame = +2
Query: 65 ETYDPEEDDSDEGAPAVFPKSDAQRARLAEAVRGILLFRSLDAQQMQQVLDAMFEKRSEP 244
ET +E++ + P + D +R VR + LF ++D + + + + +
Sbjct: 438 ETRGVDEENIVQSLPKDL-RRDIKRHLCLNLVRRVPLFANMDERLLDAICERLKPSLFTE 496
Query: 245 GEYVIRQGDDGDNFYVIENGVFDVLVTGDDR 337
Y++R+GD + I G + + T R
Sbjct: 497 STYIVREGDPVNEMMFIIRGRLESVTTDGGR 527
>At1g01340.1 68414.m00049 cyclic nucleotide-regulated ion channel
(CNGC10) (ACBK1) almost identical to CaM-regulated
potassium ion channel (ACBK1) GI:8515883 from
[Arabidopsis thaliana]; contains Pfam domain, PF00520:
Ion transport protein
Length = 706
Score = 30.3 bits (65), Expect = 0.78
Identities = 22/89 (24%), Positives = 37/89 (41%), Gaps = 1/89 (1%)
Frame = +2
Query: 65 ETYDPEEDDSDEGAPAVFPKSDAQRARLAEAVRGILLFRSLDAQQMQQVLDAMFEKRSEP 244
ET EE+ P + D +R + ++ + LF +D Q + V D +
Sbjct: 433 ETRGVEEETLLRNLPKDL-RRDIKRHLCLDLLKKVPLFEIMDEQLLDAVCDRLRPVLYTE 491
Query: 245 GEYVIRQGDD-GDNFYVIENGVFDVLVTG 328
YVIR+GD G+ +V+ + G
Sbjct: 492 NSYVIREGDPVGEMLFVMRGRLVSATTNG 520
>At2g28690.1 68415.m03487 expressed protein
Length = 231
Score = 29.9 bits (64), Expect = 1.0
Identities = 12/29 (41%), Positives = 20/29 (68%)
Frame = -1
Query: 232 LFEHRIQNLLHLLRVKRTEQQYAPDRLSE 146
L + ++NLLHLL++ R E+ A D+L +
Sbjct: 41 LHQEEVKNLLHLLKLARQERDEAKDQLQK 69
>At1g09080.1 68414.m01013 luminal binding protein 3 (BiP-3) (BP3)
Similar to Arabidopsis luminal binding protein
(gb|D89342); contains Pfam domain PF00012: dnaK protein
Length = 678
Score = 29.5 bits (63), Expect = 1.4
Identities = 21/78 (26%), Positives = 35/78 (44%), Gaps = 2/78 (2%)
Frame = +2
Query: 107 PAVFPKSDAQRARLAEAVRGILLFRSLDAQQMQQVLDAMFEKRSEPG--EYVIRQGDDGD 280
PA F + Q + A A+ G+ + R ++ + + +K E Y + G
Sbjct: 193 PAYFNDAQRQATKDAGAIAGLNVVRIINEPTGAAIAYGLDKKGGESNILVYDLGGGTFDV 252
Query: 281 NFYVIENGVFDVLVTGDD 334
+ I+NGVF+VL T D
Sbjct: 253 SILTIDNGVFEVLSTSGD 270
>At4g00510.1 68417.m00070 cyclic nucleotide-binding
domain-containing protein contains Pfam profile: PF00027
cyclic nucleotide-binding domain
Length = 175
Score = 29.1 bits (62), Expect = 1.8
Identities = 17/87 (19%), Positives = 42/87 (48%), Gaps = 6/87 (6%)
Frame = +2
Query: 146 LAEAVRGILLFRSLDAQQMQQVLDAMFEKRSEPGEYVIRQGDDGDNFYVIENGVFDVLV- 322
+ E + + L + L + ++++ + + K + G+YV+R+ + D Y + G V
Sbjct: 6 VVEFLGNVTLLQRLPSSSLKRISEVVVFKGYDRGDYVVRENQNVDGVYFLLQGQVRAQVL 65
Query: 323 --TGDDRVEKVV---HTYEGSGSFGEL 388
G++ ++ + + G G FG++
Sbjct: 66 RSAGEENYQEFPLKRYDFFGHGIFGDV 92
>At3g50580.1 68416.m05532 proline-rich family protein contains
proline-rich extensin domains, INTERPRO:IPR002965
Length = 265
Score = 29.1 bits (62), Expect = 1.8
Identities = 20/47 (42%), Positives = 23/47 (48%)
Frame = -2
Query: 384 SPNEPEPSYVWTTFSTRSSPVTRTSKTPFSMT*KLSPSSPCLITYSP 244
SP+ P PS T ST S P K+P T K SPS P L + P
Sbjct: 76 SPSTPIPS----TPSTPSPPPPAPKKSPPPPTPKKSPSPPSLTPFVP 118
>At1g77460.1 68414.m09020 C2 domain-containing protein /
armadillo/beta-catenin repeat family protein similar to
CCLS 65 [Silene latifolia] GI:2570102; contains Pfam
profiles PF00514: Armadillo/beta-catenin-like repeat,
PF00168: C2 domain
Length = 2110
Score = 29.1 bits (62), Expect = 1.8
Identities = 14/30 (46%), Positives = 18/30 (60%)
Frame = -1
Query: 382 AKRTGTFVCVDHLFDAVVSGDQDVENAVLD 293
A TF C+ HL A+ SG +DV+ VLD
Sbjct: 1899 ASEAATF-CIPHLVGALKSGVEDVQGLVLD 1927
>At5g22170.1 68418.m02581 hypothetical protein
Length = 179
Score = 28.7 bits (61), Expect = 2.4
Identities = 10/23 (43%), Positives = 14/23 (60%)
Frame = -3
Query: 461 VHGPTERRRSGPVQMPPAACCTS 393
+H P + RR GP + PA CC +
Sbjct: 12 IHQPGQCRRRGPEDITPAHCCAT 34
>At3g48010.1 68416.m05234 cyclic nucleotide-regulated ion channel,
putative (CNGC16) similar to cyclic nucleotide and
calmodulin-regulated ion channel (cngc6) GI:4581207 from
[Arabidopsis thaliana]
Length = 705
Score = 28.7 bits (61), Expect = 2.4
Identities = 17/68 (25%), Positives = 27/68 (39%)
Frame = +2
Query: 134 QRARLAEAVRGILLFRSLDAQQMQQVLDAMFEKRSEPGEYVIRQGDDGDNFYVIENGVFD 313
QR VR + F +D Q + + + + + YVIR+GD + I G +
Sbjct: 444 QRHLCLALVRRVPFFAQMDDQLLDAICERLVPSLNTKDTYVIREGDPVNEMLFIIRGQME 503
Query: 314 VLVTGDDR 337
T R
Sbjct: 504 SSTTDGGR 511
>At3g08670.1 68416.m01007 expressed protein
Length = 567
Score = 28.7 bits (61), Expect = 2.4
Identities = 18/49 (36%), Positives = 26/49 (53%)
Frame = -2
Query: 447 RAPAVWARTDAARGMLYIRASSPNEPEPSYVWTTFSTRSSPVTRTSKTP 301
R+P+ T +A YIR SSP+ S + TR+S +R+S TP
Sbjct: 174 RSPSSILNTSSASVSSYIRPSSPSSRSSSSARPSTPTRTSSASRSS-TP 221
>At2g19440.1 68415.m02269 glycosyl hydrolase family 17 protein
similar to elicitor inducible chitinase Nt-SubE76
GI:11071974 from [Nicotiana tabacum]; an isoform
contains a non-consensus GA-AG intron
Length = 478
Score = 28.3 bits (60), Expect = 3.1
Identities = 15/45 (33%), Positives = 23/45 (51%), Gaps = 4/45 (8%)
Frame = -1
Query: 136 LCVRLGEHG----RGSFVRIILFGVISLGENGFAPIVKARHWRLF 14
L RLGE+ R +++ + LFG++ AP RHW +F
Sbjct: 284 LLPRLGENRGTPLRPTYIEVYLFGLLDEDAKSIAPGEFERHWGIF 328
>At5g42020.2 68418.m05116 luminal binding protein 2 (BiP-2) (BP2)
similar to SWISS-PROT: Q39043; GI:1303695; luminal
binding protein (BiP) [Arabidopsis thaliana]
Length = 613
Score = 27.9 bits (59), Expect = 4.2
Identities = 21/78 (26%), Positives = 34/78 (43%), Gaps = 2/78 (2%)
Frame = +2
Query: 107 PAVFPKSDAQRARLAEAVRGILLFRSLDAQQMQQVLDAMFEKRSEPGEYVIRQGDDGDNF 286
PA F + Q + A + G+ + R ++ + + +K E V G +
Sbjct: 179 PAYFNDAQRQATKDAGVIAGLNVARIINEPTAAAIAYGLDKKGGEKNILVFDLGGGTFDV 238
Query: 287 YV--IENGVFDVLVTGDD 334
V I+NGVF+VL T D
Sbjct: 239 SVLTIDNGVFEVLSTNGD 256
>At5g42020.1 68418.m05115 luminal binding protein 2 (BiP-2) (BP2)
similar to SWISS-PROT: Q39043; GI:1303695; luminal
binding protein (BiP) [Arabidopsis thaliana]
Length = 668
Score = 27.9 bits (59), Expect = 4.2
Identities = 21/78 (26%), Positives = 34/78 (43%), Gaps = 2/78 (2%)
Frame = +2
Query: 107 PAVFPKSDAQRARLAEAVRGILLFRSLDAQQMQQVLDAMFEKRSEPGEYVIRQGDDGDNF 286
PA F + Q + A + G+ + R ++ + + +K E V G +
Sbjct: 179 PAYFNDAQRQATKDAGVIAGLNVARIINEPTAAAIAYGLDKKGGEKNILVFDLGGGTFDV 238
Query: 287 YV--IENGVFDVLVTGDD 334
V I+NGVF+VL T D
Sbjct: 239 SVLTIDNGVFEVLSTNGD 256
>At5g40590.1 68418.m04926 DC1 domain-containing protein predicted
protein, Arabidopsis thaliana
Length = 234
Score = 27.9 bits (59), Expect = 4.2
Identities = 12/20 (60%), Positives = 13/20 (65%), Gaps = 2/20 (10%)
Frame = -3
Query: 92 NHPLRGHKSRRKR--ICADC 39
NHPLRGHK K IC+ C
Sbjct: 13 NHPLRGHKCEAKDEIICSGC 32
>At5g28540.1 68418.m03480 luminal binding protein 1 (BiP-1) (BP1)
SWISS-PROT:Q9LKR3 PMID:8888624
Length = 669
Score = 27.9 bits (59), Expect = 4.2
Identities = 21/78 (26%), Positives = 34/78 (43%), Gaps = 2/78 (2%)
Frame = +2
Query: 107 PAVFPKSDAQRARLAEAVRGILLFRSLDAQQMQQVLDAMFEKRSEPGEYVIRQGDDGDNF 286
PA F + Q + A + G+ + R ++ + + +K E V G +
Sbjct: 179 PAYFNDAQRQATKDAGVIAGLNVARIINEPTAAAIAYGLDKKGGEKNILVFDLGGGTFDV 238
Query: 287 YV--IENGVFDVLVTGDD 334
V I+NGVF+VL T D
Sbjct: 239 SVLTIDNGVFEVLSTNGD 256
>At4g33480.1 68417.m04755 expressed protein
Length = 336
Score = 27.5 bits (58), Expect = 5.5
Identities = 15/43 (34%), Positives = 21/43 (48%), Gaps = 1/43 (2%)
Frame = -1
Query: 406 HVVHQGQ-FAKRTGTFVCVDHLFDAVVSGDQDVENAVLDDVEV 281
H+VH G + R G D++FD QDVE + VE+
Sbjct: 221 HLVHSGFCYTARGGFCYTEDNVFDFRTDDGQDVEGLPTEGVEI 263
>At1g62760.1 68414.m07083 invertase/pectin methylesterase inhibitor
family protein low similarity to extensin [Volvox
carteri] GI:21992
Length = 312
Score = 27.5 bits (58), Expect = 5.5
Identities = 20/56 (35%), Positives = 27/56 (48%), Gaps = 1/56 (1%)
Frame = -2
Query: 402 LYIRASSPNEPEPSYV-WTTFSTRSSPVTRTSKTPFSMT*KLSPSSPCLITYSPGS 238
L + SSP P PS ++ S SP +S + LSPSSP ++ SP S
Sbjct: 61 LSLSPSSPPPPPPSSSPLSSLSPSLSPSPPSSSPSSAPPSSLSPSSPPPLSLSPSS 116
>At1g51915.1 68414.m05852 cryptdin protein-related contains weak
similarity to Swiss-Prot:P17533 cryptdin-related protein
1C precursor (CRS1C) [Mus musculus]
Length = 67
Score = 27.5 bits (58), Expect = 5.5
Identities = 15/42 (35%), Positives = 20/42 (47%), Gaps = 2/42 (4%)
Frame = -2
Query: 282 LSPSSPCLITYSPGSDLFSNIASRTC--CICCASRERNSSMP 163
LSP PC T + D + + R C C+CCA R + P
Sbjct: 20 LSPILPCQATRAH-LDAETRMLRRVCPSCVCCAPAPRGACCP 60
>At1g08400.1 68414.m00929 chromosome structural maintenance
protein-related contains weak similarity to
RAD50-interacting protein 1 [Homo sapiens]
gi|11967435|gb|AAG42101
Length = 804
Score = 27.5 bits (58), Expect = 5.5
Identities = 15/57 (26%), Positives = 30/57 (52%)
Frame = -1
Query: 292 DVEVVAVIALSDYVLAGLGSLFEHRIQNLLHLLRVKRTEQQYAPDRLSETGSLCVRL 122
+V+ A++ + G+ F R++ +L LLR+ E+ LS +G+ C++L
Sbjct: 731 EVDAEALLTVLKPYCVRPGAFFP-RVREILRLLRMHEEEKARLRGALSRSGNTCLKL 786
>At5g18220.1 68418.m02138 glycosyl hydrolase family 17 protein
similar to elicitor inducible chitinase Nt-SubE76
GI:11071974 from [Nicotiana tabacum]
Length = 488
Score = 27.1 bits (57), Expect = 7.3
Identities = 13/41 (31%), Positives = 17/41 (41%)
Frame = -1
Query: 136 LCVRLGEHGRGSFVRIILFGVISLGENGFAPIVKARHWRLF 14
L G R ++ + LFG I AP RHW +F
Sbjct: 295 LAANRGTPMRPGYIEVYLFGFIDEDAKSIAPGNFERHWGIF 335
>At2g17740.1 68415.m02055 DC1 domain-containing protein
Length = 248
Score = 27.1 bits (57), Expect = 7.3
Identities = 13/30 (43%), Positives = 19/30 (63%), Gaps = 2/30 (6%)
Frame = -3
Query: 92 NHPLRGHKSR--RKRICADC*SAPLAAFLQ 9
NHPLRGHK++ + IC+ C L A+ +
Sbjct: 13 NHPLRGHKAQVEDEIICSGCDLDLLGAYFK 42
>At1g64760.1 68414.m07343 glycosyl hydrolase family 17 protein
similar to elicitor inducible chitinase Nt-SubE76
GI:11071974 from [Nicotiana tabacum]
Length = 481
Score = 27.1 bits (57), Expect = 7.3
Identities = 10/32 (31%), Positives = 17/32 (53%)
Frame = -1
Query: 109 RGSFVRIILFGVISLGENGFAPIVKARHWRLF 14
R +++ + LFG++ AP RHW +F
Sbjct: 301 RPTYIEVYLFGLLDEDAKSIAPGPFERHWGIF 332
>At1g18860.1 68414.m02348 WRKY family transcription factor contains
Pfam profile: PF03106 WRKY DNA -binding domain
Length = 480
Score = 27.1 bits (57), Expect = 7.3
Identities = 18/54 (33%), Positives = 23/54 (42%)
Frame = -2
Query: 459 PWPHRAPAVWARTDAARGMLYIRASSPNEPEPSYVWTTFSTRSSPVTRTSKTPF 298
P P A A+ + T AA ML ASS + FS + +T KT F
Sbjct: 249 PLPMSATAMASATSAAASMLLSGASSSSSAAADLHGLNFSLSGNNITPKPKTHF 302
>At4g29050.1 68417.m04155 lectin protein kinase family protein
contains Pfam domains, PF00138: Legume lectins alpha
domain, PF00139: Legume lectins beta domain and PF00069:
Protein kinase domain
Length = 669
Score = 26.6 bits (56), Expect = 9.6
Identities = 11/27 (40%), Positives = 14/27 (51%)
Frame = +3
Query: 36 LTIGANPFSPRLMTPKRMILTKEPLPC 116
+T G P PR +P M+LT L C
Sbjct: 538 ITCGRRPVLPRASSPSEMVLTDWVLDC 564
>At3g04010.1 68416.m00422 glycosyl hydrolase family 17 protein
similar to beta-1,3-glucanase GB:S12402 [Nicotiana sp],
GB:CAA03908 [Citrus sinensis], GB:S44364 [Lycopersicon
esculentum]
Length = 491
Score = 26.6 bits (56), Expect = 9.6
Identities = 13/41 (31%), Positives = 18/41 (43%)
Frame = -1
Query: 136 LCVRLGEHGRGSFVRIILFGVISLGENGFAPIVKARHWRLF 14
L +G R ++ + LFG I AP RHW +F
Sbjct: 300 LANNVGTPMRKGYIEVYLFGFIDEDAKSVAPGNFERHWGIF 340
>At1g80070.1 68414.m09373 splicing factor, putative strong similarity
to splicing factor Prp8 [Homo sapiens] GI:3661610;
contains Pfam profile PF01398: Mov34/MPN/PAD-1 family
Length = 2382
Score = 26.6 bits (56), Expect = 9.6
Identities = 17/49 (34%), Positives = 21/49 (42%), Gaps = 8/49 (16%)
Frame = +2
Query: 344 KVVHTYEGSGSFGELALMYNMPR--------AASVRAQTAGALWGHGPP 466
+V H Y S E Y MP+ A +R Q AG L+G PP
Sbjct: 2133 RVNHIYVNSDDIKETGYTYIMPKNILKKFICVADLRTQIAGYLYGISPP 2181
>At1g44120.1 68414.m05096 C2 domain-containing protein /
armadillo/beta-catenin repeat family protein similar to
CCLS 65 [Silene latifolia] GI:2570102; contains Pfam
profiles PF00514: Armadillo/beta-catenin-like repeat,
PF00168: C2 domain
Length = 2114
Score = 26.6 bits (56), Expect = 9.6
Identities = 8/24 (33%), Positives = 16/24 (66%)
Frame = -1
Query: 358 CVDHLFDAVVSGDQDVENAVLDDV 287
C+ HL A+ SG+Q+ ++ +D +
Sbjct: 1912 CIPHLIGALKSGEQEARDSAMDTI 1935
>At1g20110.1 68414.m02516 zinc finger (FYVE type) family protein
contains Pfam profile: PF01363 FYVE zinc finger
Length = 601
Score = 26.6 bits (56), Expect = 9.6
Identities = 14/37 (37%), Positives = 15/37 (40%)
Frame = -3
Query: 452 PTERRRSGPVQMPPAACCTSGPVRQTNRNLRMCGPPF 342
PT P PPA +GP T RN PPF
Sbjct: 20 PTPNPNPNPNPSPPAPATVAGPTDLT-RNTYASAPPF 55
>At1g03060.1 68414.m00280 WD-40 repeat family protein /
beige-related similar to BEIGE (GI:3928547) [Rattus
norvegicus]; Similar to gb|U70015 lysosomal trafficking
regulator from Mus musculus and contains 2 Pfam PF00400
WD-40, G-beta repeats. ESTs gb|T43386 and gb|AA395236
come from this gene
Length = 3601
Score = 26.6 bits (56), Expect = 9.6
Identities = 11/42 (26%), Positives = 26/42 (61%)
Frame = -1
Query: 373 TGTFVCVDHLFDAVVSGDQDVENAVLDDVEVVAVIALSDYVL 248
+G F C+ H+ A+++ D+ ++ + D+EVV+ + Y++
Sbjct: 188 SGIFCCLIHVLIALLAYDELSKSKITGDLEVVSAEKDAGYIV 229
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,824,653
Number of Sequences: 28952
Number of extensions: 258348
Number of successful extensions: 981
Number of sequences better than 10.0: 44
Number of HSP's better than 10.0 without gapping: 935
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 979
length of database: 12,070,560
effective HSP length: 76
effective length of database: 9,870,208
effective search space used: 908059136
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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