Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= epV30526
         (356 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB018288-1|BAA34465.1|  909|Homo sapiens KIAA0745 protein protein.     30   2.4  
X82834-1|CAA58041.1| 2185|Homo sapiens 256 kD golgin protein.          28   7.4  
U41740-1|AAC50434.1| 2230|Homo sapiens trans-Golgi p230 protein.       28   7.4  
U31906-1|AAC51791.1| 2083|Homo sapiens golgin-245 protein.             28   7.4  

>AB018288-1|BAA34465.1|  909|Homo sapiens KIAA0745 protein protein.
          Length = 909

 Score = 29.9 bits (64), Expect = 2.4
 Identities = 14/29 (48%), Positives = 21/29 (72%)
 Frame = +1

Query: 55  LCMLQIPTSLTTFWRSSFTIASSLPITTV 141
           LC +QIPTS    WRS+F  +S+L ++T+
Sbjct: 247 LCTVQIPTS----WRSAFLDSSTLQLSTI 271


>X82834-1|CAA58041.1| 2185|Homo sapiens 256 kD golgin protein.
          Length = 2185

 Score = 28.3 bits (60), Expect = 7.4
 Identities = 11/36 (30%), Positives = 23/36 (63%)
 Frame = +3

Query: 93   LEEQLYNSVVVADYDSAVEKSKHLYEEKKSEVITNV 200
            L  QL NS+ +++ ++A+   +  Y+E+K E++  V
Sbjct: 1379 LNVQLQNSISLSEKEAAISSLRKQYDEEKCELLDQV 1414


>U41740-1|AAC50434.1| 2230|Homo sapiens trans-Golgi p230 protein.
          Length = 2230

 Score = 28.3 bits (60), Expect = 7.4
 Identities = 11/36 (30%), Positives = 23/36 (63%)
 Frame = +3

Query: 93   LEEQLYNSVVVADYDSAVEKSKHLYEEKKSEVITNV 200
            L  QL NS+ +++ ++A+   +  Y+E+K E++  V
Sbjct: 1379 LNVQLQNSISLSEKEAAISSLRKQYDEEKCELLDQV 1414


>U31906-1|AAC51791.1| 2083|Homo sapiens golgin-245 protein.
          Length = 2083

 Score = 28.3 bits (60), Expect = 7.4
 Identities = 11/36 (30%), Positives = 23/36 (63%)
 Frame = +3

Query: 93   LEEQLYNSVVVADYDSAVEKSKHLYEEKKSEVITNV 200
            L  QL NS+ +++ ++A+   +  Y+E+K E++  V
Sbjct: 1234 LNVQLQNSISLSEKEAAISSLRKQYDEEKCELLDQV 1269


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 42,932,164
Number of Sequences: 237096
Number of extensions: 697357
Number of successful extensions: 2065
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 2034
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2065
length of database: 76,859,062
effective HSP length: 81
effective length of database: 57,654,286
effective search space used: 2133208582
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)