Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= epV30524
         (516 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    27   0.13 
AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase ...    25   0.40 
AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase ...    25   0.40 
DQ855504-1|ABH88191.1|  124|Tribolium castaneum chemosensory pro...    25   0.53 
DQ855499-1|ABH88186.1|  124|Tribolium castaneum chemosensory pro...    21   4.9  
DQ342040-1|ABC69932.1|  822|Tribolium castaneum STIP protein.          21   6.5  
AM292354-1|CAL23166.1|  321|Tribolium castaneum gustatory recept...    21   6.5  
AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory recept...    21   8.6  

>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 protein.
          Length = 2700

 Score = 26.6 bits (56), Expect = 0.13
 Identities = 12/33 (36%), Positives = 18/33 (54%)
 Frame = +2

Query: 5    TSSTKSRARLTKPTAPSTTWMPLRRSCPSRTPT 103
            T++T  R   T+PT  STT  P   + P++  T
Sbjct: 1053 TTTTTRRTTTTRPTTTSTTTRPTTTNWPTQGTT 1085


>AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase
            protein.
          Length = 1464

 Score = 25.0 bits (52), Expect = 0.40
 Identities = 18/76 (23%), Positives = 36/76 (47%), Gaps = 1/76 (1%)
 Frame = +1

Query: 268  NIREQVEEEAEGKADLQRQLSKANAEAQLWRSKYESEGVARSEELE-EAKRKLQARLAEA 444
            N  +++EE+   K D       ANA+      ++    + +      +A  K   +L + 
Sbjct: 1046 NAVQKIEEKKPEKKDKVLTFLGANAQDDEGGLEFSVNKLFKCMICTYKADNKENEQLRKI 1105

Query: 445  EETIESLNQKVVALEK 492
            +E++  LN+K+ +LEK
Sbjct: 1106 QESLRDLNRKIESLEK 1121


>AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase CHS2
            protein.
          Length = 1464

 Score = 25.0 bits (52), Expect = 0.40
 Identities = 18/76 (23%), Positives = 36/76 (47%), Gaps = 1/76 (1%)
 Frame = +1

Query: 268  NIREQVEEEAEGKADLQRQLSKANAEAQLWRSKYESEGVARSEELE-EAKRKLQARLAEA 444
            N  +++EE+   K D       ANA+      ++    + +      +A  K   +L + 
Sbjct: 1046 NAVQKIEEKKPEKKDKVLTFLGANAQDDEGGLEFSVNKLFKCMICTYKADNKENEQLRKI 1105

Query: 445  EETIESLNQKVVALEK 492
            +E++  LN+K+ +LEK
Sbjct: 1106 QESLRDLNRKIESLEK 1121


>DQ855504-1|ABH88191.1|  124|Tribolium castaneum chemosensory
           protein 18 protein.
          Length = 124

 Score = 24.6 bits (51), Expect = 0.53
 Identities = 11/37 (29%), Positives = 20/37 (54%)
 Frame = +1

Query: 268 NIREQVEEEAEGKADLQRQLSKANAEAQLWRSKYESE 378
           N+R+ +    + K D+ +QL      +  +RSKY+ E
Sbjct: 80  NVRKVLHHLIDNKPDMWKQLEAKYDPSGEYRSKYKDE 116


>DQ855499-1|ABH88186.1|  124|Tribolium castaneum chemosensory
           protein 13 protein.
          Length = 124

 Score = 21.4 bits (43), Expect = 4.9
 Identities = 8/17 (47%), Positives = 12/17 (70%)
 Frame = -1

Query: 483 SDNLLVEGFDCLLGFGE 433
           S+ L+   F+CLLG G+
Sbjct: 34  SERLMKSYFECLLGTGK 50


>DQ342040-1|ABC69932.1|  822|Tribolium castaneum STIP protein.
          Length = 822

 Score = 21.0 bits (42), Expect = 6.5
 Identities = 7/11 (63%), Positives = 8/11 (72%)
 Frame = +2

Query: 59  TWMPLRRSCPS 91
           TWMP+ R C S
Sbjct: 477 TWMPVMRICVS 487


>AM292354-1|CAL23166.1|  321|Tribolium castaneum gustatory receptor
           candidate 33 protein.
          Length = 321

 Score = 21.0 bits (42), Expect = 6.5
 Identities = 6/11 (54%), Positives = 11/11 (100%)
 Frame = +1

Query: 343 EAQLWRSKYES 375
           +AQLW+++YE+
Sbjct: 165 KAQLWQNRYET 175


>AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory receptor
           candidate 46 protein.
          Length = 1451

 Score = 20.6 bits (41), Expect = 8.6
 Identities = 9/27 (33%), Positives = 13/27 (48%)
 Frame = +1

Query: 193 RLADEEARERATLLGKFRNLEHDLDNI 273
           RL   E + ++  LGK   L H L  +
Sbjct: 838 RLIKMETKAQSVALGKICTLHHHLSKL 864


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.303    0.119    0.291 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 93,566
Number of Sequences: 336
Number of extensions: 1873
Number of successful extensions: 8
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 122,585
effective HSP length: 53
effective length of database: 104,777
effective search space used: 12363686
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 17 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.0 bits)