Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= epV30523
         (516 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292344-1|CAL23156.1|  291|Tribolium castaneum gustatory recept...    27   0.13 
EU019711-1|ABU25223.1|  534|Tribolium castaneum chitin deacetyla...    23   1.6  
AM292380-1|CAL23192.2|  489|Tribolium castaneum gustatory recept...    22   2.8  
AM292346-1|CAL23158.2|  314|Tribolium castaneum gustatory recept...    22   2.8  
AJ307577-1|CAC84070.1|  301|Tribolium castaneum dachshund protein.     22   2.8  
AY873916-1|AAW67572.1|  377|Tribolium castaneum chitinase 6 prot...    21   6.5  
U09586-3|AAC47272.1|  470|Tribolium castaneum integrase protein.       21   8.6  

>AM292344-1|CAL23156.1|  291|Tribolium castaneum gustatory receptor
           candidate 23 protein.
          Length = 291

 Score = 26.6 bits (56), Expect = 0.13
 Identities = 7/25 (28%), Positives = 15/25 (60%)
 Frame = -1

Query: 84  YSFFGSINLWGKILTEFQWVTIFRI 10
           Y FFG++ LW ++ + F  + +  +
Sbjct: 89  YHFFGTLKLWSQLFSTFAGIEVLHV 113


>EU019711-1|ABU25223.1|  534|Tribolium castaneum chitin deacetylase
           1 protein.
          Length = 534

 Score = 23.0 bits (47), Expect = 1.6
 Identities = 14/44 (31%), Positives = 21/44 (47%), Gaps = 1/44 (2%)
 Frame = +2

Query: 209 WREWKVLKPAAVHFVPQEGKWKRDELTGETYPIQN-IPIPLKFP 337
           WRE  V++     +VP   K    E+ GET  +Q  +  P  +P
Sbjct: 480 WREKCVVEGNPHCWVPHSCKLTSKEVPGETINLQTCVRCPNNYP 523


>AM292380-1|CAL23192.2|  489|Tribolium castaneum gustatory receptor
           candidate 59 protein.
          Length = 489

 Score = 22.2 bits (45), Expect = 2.8
 Identities = 8/15 (53%), Positives = 11/15 (73%)
 Frame = -3

Query: 334 EFKRNRNILYRISFT 290
           E+KR + +LYRI  T
Sbjct: 306 EYKRTKKLLYRIPVT 320


>AM292346-1|CAL23158.2|  314|Tribolium castaneum gustatory receptor
           candidate 25 protein.
          Length = 314

 Score = 22.2 bits (45), Expect = 2.8
 Identities = 8/15 (53%), Positives = 11/15 (73%)
 Frame = -3

Query: 334 EFKRNRNILYRISFT 290
           E+KR + +LYRI  T
Sbjct: 131 EYKRTKKLLYRIPVT 145


>AJ307577-1|CAC84070.1|  301|Tribolium castaneum dachshund protein.
          Length = 301

 Score = 22.2 bits (45), Expect = 2.8
 Identities = 13/40 (32%), Positives = 20/40 (50%)
 Frame = +2

Query: 227 LKPAAVHFVPQEGKWKRDELTGETYPIQNIPIPLKFPAEI 346
           L  AA H   Q+ + K+  L    YP +N  +  +FP +I
Sbjct: 49  LSLAASHL--QQQQLKKQRLDNGDYPYENGHMGAEFPLDI 86


>AY873916-1|AAW67572.1|  377|Tribolium castaneum chitinase 6
           protein.
          Length = 377

 Score = 21.0 bits (42), Expect = 6.5
 Identities = 6/15 (40%), Positives = 10/15 (66%)
 Frame = +2

Query: 254 PQEGKWKRDELTGET 298
           P +G+W+RD L   +
Sbjct: 221 PLDGEWQRDNLNANS 235


>U09586-3|AAC47272.1|  470|Tribolium castaneum integrase protein.
          Length = 470

 Score = 20.6 bits (41), Expect = 8.6
 Identities = 8/37 (21%), Positives = 17/37 (45%)
 Frame = -1

Query: 123 AVTCKREDAIELLYSFFGSINLWGKILTEFQWVTIFR 13
           ++  K  D    L   FG+  ++  +  E+ W  ++R
Sbjct: 127 SLVIKLVDYHHQLLGHFGATKVYNSMKREYYWPNMYR 163


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 120,578
Number of Sequences: 336
Number of extensions: 2619
Number of successful extensions: 7
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 122,585
effective HSP length: 53
effective length of database: 104,777
effective search space used: 12363686
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)