Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= epV30523
         (516 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF077539-3|AAC26291.1|  310|Caenorhabditis elegans Hypothetical ...    64   7e-11
AF068709-15|AAC19246.2|  317|Caenorhabditis elegans Serpentine r...    31   0.37 
U28940-6|AAA68352.1|  925|Caenorhabditis elegans Hypothetical pr...    29   2.0  
Z81533-13|CAB04336.2|  323|Caenorhabditis elegans Hypothetical p...    27   6.0  
Z68006-8|CAA91999.1| 1328|Caenorhabditis elegans Hypothetical pr...    27   6.0  
Z68005-6|CAA91994.1| 1328|Caenorhabditis elegans Hypothetical pr...    27   6.0  
Z47357-3|CAA87422.1|  360|Caenorhabditis elegans Hypothetical pr...    27   6.0  
AC024805-15|AAK39331.2|  344|Caenorhabditis elegans Hypothetical...    27   6.0  
Z81544-6|CAI46607.1|  376|Caenorhabditis elegans Hypothetical pr...    27   8.0  
Z69792-3|CAA93666.1|  284|Caenorhabditis elegans Hypothetical pr...    27   8.0  
Z35598-4|CAA84653.1|  488|Caenorhabditis elegans Hypothetical pr...    27   8.0  

>AF077539-3|AAC26291.1|  310|Caenorhabditis elegans Hypothetical
           protein T25D3.2 protein.
          Length = 310

 Score = 63.7 bits (148), Expect = 7e-11
 Identities = 37/120 (30%), Positives = 61/120 (50%), Gaps = 7/120 (5%)
 Frame = +2

Query: 173 IASELPPAYKKFWREWKVLKPAAVHFVPQEGKWKRDELTGETYPIQNIPIPLKFPAEINE 352
           +   LP  YK  + E  +     VH+ P   ++  D        ++  PI      E ++
Sbjct: 41  VVHRLPEHYKTRYWETILSDKTPVHYRPPTSRFAHDSFKNVEIELEENPIIGIRTPEGDD 100

Query: 353 GIWGGEAVVKGFQKRD--DRRRRVPHYWV-----PVLKRTVVRSEVLNTHLSVTVTDRTI 511
           G+WGGE VVKG+ +     +++ +P YWV     P LK  V+ SE+L+ ++ VTVT+R +
Sbjct: 101 GLWGGERVVKGWIESAPYTKKKILPRYWVPKLFFPALKNVVLYSEILDKYIKVTVTERAM 160


>AF068709-15|AAC19246.2|  317|Caenorhabditis elegans Serpentine
           receptor, class g (gamma)protein 62 protein.
          Length = 317

 Score = 31.5 bits (68), Expect = 0.37
 Identities = 16/57 (28%), Positives = 24/57 (42%)
 Frame = +2

Query: 188 PPAYKKFWREWKVLKPAAVHFVPQEGKWKRDELTGETYPIQNIPIPLKFPAEINEGI 358
           P  Y+ FW  W +L    V F     K+  D    E Y +    I + FP  +++ I
Sbjct: 131 PYQYENFWSRWNLLVFLVVCFFSHLPKYLWDGFLYEVYIVNGQLICINFPTTLDQAI 187


>U28940-6|AAA68352.1|  925|Caenorhabditis elegans Hypothetical
           protein T24H7.2 protein.
          Length = 925

 Score = 29.1 bits (62), Expect = 2.0
 Identities = 15/39 (38%), Positives = 22/39 (56%)
 Frame = +2

Query: 200 KKFWREWKVLKPAAVHFVPQEGKWKRDELTGETYPIQNI 316
           K F  E KV+ P  VHFV +    K +E+TGE   ++ +
Sbjct: 422 KPFNIEEKVIFPVEVHFVSKIRDEKTEEITGEKNVVKTL 460


>Z81533-13|CAB04336.2|  323|Caenorhabditis elegans Hypothetical
           protein F36G9.6 protein.
          Length = 323

 Score = 27.5 bits (58), Expect = 6.0
 Identities = 14/25 (56%), Positives = 17/25 (68%), Gaps = 1/25 (4%)
 Frame = +3

Query: 42  LISFPKDLCFQK-NYKAIRWHPLVY 113
           LI FP D  FQK N K +RW PL++
Sbjct: 136 LIIFPSD--FQKINIKILRWLPLIF 158


>Z68006-8|CAA91999.1| 1328|Caenorhabditis elegans Hypothetical protein
            K09C8.5 protein.
          Length = 1328

 Score = 27.5 bits (58), Expect = 6.0
 Identities = 14/37 (37%), Positives = 19/37 (51%)
 Frame = +1

Query: 34   KFC*YLSPKIYASKKTIKQFDGILSFTGNCASVVENI 144
            KFC    PK ++  K I Q D ++S   +   V ENI
Sbjct: 1109 KFCNLTVPKTWSDMKNIVQNDTVISKLQSLYGVTENI 1145


>Z68005-6|CAA91994.1| 1328|Caenorhabditis elegans Hypothetical protein
            K09C8.5 protein.
          Length = 1328

 Score = 27.5 bits (58), Expect = 6.0
 Identities = 14/37 (37%), Positives = 19/37 (51%)
 Frame = +1

Query: 34   KFC*YLSPKIYASKKTIKQFDGILSFTGNCASVVENI 144
            KFC    PK ++  K I Q D ++S   +   V ENI
Sbjct: 1109 KFCNLTVPKTWSDMKNIVQNDTVISKLQSLYGVTENI 1145


>Z47357-3|CAA87422.1|  360|Caenorhabditis elegans Hypothetical
           protein ZK1128.3 protein.
          Length = 360

 Score = 27.5 bits (58), Expect = 6.0
 Identities = 12/35 (34%), Positives = 21/35 (60%)
 Frame = -3

Query: 478 SIENFRSYYSSLQYWHPVVRYPASSIITLLETFNH 374
           S+ENF+S+     YW+P +   ++S   +  T+NH
Sbjct: 173 SVENFQSHRMRRVYWNPSIPKDSNS---MFRTWNH 204


>AC024805-15|AAK39331.2|  344|Caenorhabditis elegans Hypothetical
           protein Y51H7C.13 protein.
          Length = 344

 Score = 27.5 bits (58), Expect = 6.0
 Identities = 12/31 (38%), Positives = 17/31 (54%), Gaps = 2/31 (6%)
 Frame = +2

Query: 293 ETYPI--QNIPIPLKFPAEINEGIWGGEAVV 379
           E YP+  +N P P  +P E+  G  GGE  +
Sbjct: 279 EPYPVPTENPPSPTNYPPEVTTGSPGGEVEI 309


>Z81544-6|CAI46607.1|  376|Caenorhabditis elegans Hypothetical
           protein F49C5.9 protein.
          Length = 376

 Score = 27.1 bits (57), Expect = 8.0
 Identities = 14/41 (34%), Positives = 21/41 (51%)
 Frame = -3

Query: 394 LLETFNHSFSSPYPLIDFSGEFKRNRNILYRISFTSQFVAF 272
           L+   + SF  PYP+I F+G F  N  +   +S T   + F
Sbjct: 81  LVSLASPSFLLPYPVIFFTGPFAINYRVTLYLSSTVVLLYF 121


>Z69792-3|CAA93666.1|  284|Caenorhabditis elegans Hypothetical
           protein F40E10.5 protein.
          Length = 284

 Score = 27.1 bits (57), Expect = 8.0
 Identities = 15/36 (41%), Positives = 19/36 (52%)
 Frame = +2

Query: 179 SELPPAYKKFWREWKVLKPAAVHFVPQEGKWKRDEL 286
           SEL P  +K + EWK L+     F+    K  RDEL
Sbjct: 164 SELSPDARKAFEEWKELRLNEKKFLAGLSKEIRDEL 199


>Z35598-4|CAA84653.1|  488|Caenorhabditis elegans Hypothetical
           protein F10F2.6 protein.
          Length = 488

 Score = 27.1 bits (57), Expect = 8.0
 Identities = 13/34 (38%), Positives = 17/34 (50%)
 Frame = -3

Query: 265 PFLRNEMYSCWLQYLPLTPKFFISRWKL*RNPNF 164
           P  R  ++S WL  + L P  F S W   + PNF
Sbjct: 406 PCARFRVFS-WLHGVALNPPDFASNWMTDKEPNF 438


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,696,303
Number of Sequences: 27780
Number of extensions: 247104
Number of successful extensions: 622
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 606
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 620
length of database: 12,740,198
effective HSP length: 77
effective length of database: 10,601,138
effective search space used: 996506972
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)