Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= epV30522
(516 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_Q7M4J4 Cluster: RNA-directed DNA polymerase (EC 2.7.7.4... 181 8e-45
UniRef50_Q5NTZ1 Cluster: Non-LTR retrotransposon R1Bmks ORF1 pro... 153 2e-36
UniRef50_Q2GR87 Cluster: Putative uncharacterized protein; n=2; ... 41 0.015
UniRef50_UPI0000E4A204 Cluster: PREDICTED: similar to zinc finge... 41 0.019
UniRef50_P16424 Cluster: Uncharacterized 50 kDa protein in type ... 41 0.019
UniRef50_UPI0000E49DCE Cluster: PREDICTED: hypothetical protein;... 40 0.034
UniRef50_Q5TW75 Cluster: ENSANGP00000025446; n=1; Anopheles gamb... 40 0.034
UniRef50_A1D100 Cluster: FAD binding domain protein; n=4; Tricho... 38 0.10
UniRef50_UPI0000F30C93 Cluster: UPI0000F30C93 related cluster; n... 38 0.14
UniRef50_Q2HHK9 Cluster: Predicted protein; n=1; Chaetomium glob... 38 0.14
UniRef50_Q2GYS3 Cluster: Putative uncharacterized protein; n=1; ... 38 0.18
UniRef50_Q8AII1 Cluster: Gag-Pol polyprotein (Pr160Gag-Pol) [Con... 38 0.18
UniRef50_Q3WGS0 Cluster: Glycoside hydrolase, family 3, N-termin... 37 0.31
UniRef50_A4F6Y2 Cluster: Putative uncharacterized protein; n=1; ... 37 0.31
UniRef50_Q2HI82 Cluster: Putative uncharacterized protein; n=3; ... 37 0.31
UniRef50_Q2H8L4 Cluster: Putative uncharacterized protein; n=1; ... 37 0.31
UniRef50_Q2GWV4 Cluster: Putative uncharacterized protein; n=4; ... 37 0.31
UniRef50_Q2GU99 Cluster: Putative uncharacterized protein; n=1; ... 37 0.31
UniRef50_Q2GN74 Cluster: Putative uncharacterized protein; n=3; ... 37 0.31
UniRef50_Q2GMR4 Cluster: Putative uncharacterized protein; n=1; ... 37 0.31
UniRef50_Q2GM30 Cluster: Putative uncharacterized protein; n=1; ... 37 0.31
UniRef50_A7ELY1 Cluster: Putative uncharacterized protein; n=1; ... 37 0.31
UniRef50_Q9N9Z2 Cluster: Gag-like protein; n=1; Drosophila melan... 36 0.41
UniRef50_Q7JQ89 Cluster: CnjB protein; n=3; Tetrahymena thermoph... 36 0.41
UniRef50_Q1ZBI3 Cluster: Putative uncharacterized protein; n=1; ... 36 0.55
UniRef50_A6N214 Cluster: Putative uncharacterized protein; n=1; ... 36 0.55
UniRef50_O44312 Cluster: Gag-like zinc-finger protein; n=1; Dros... 36 0.55
UniRef50_Q5KGW6 Cluster: DNA-binding protein hexbp, putative; n=... 36 0.55
UniRef50_A7EVG0 Cluster: Reverse transcriptase; n=8; Sclerotinia... 36 0.55
UniRef50_A7EM46 Cluster: Predicted protein; n=3; Sclerotinia scl... 36 0.55
UniRef50_A7EJQ1 Cluster: Putative uncharacterized protein; n=1; ... 36 0.55
UniRef50_UPI00015559F4 Cluster: PREDICTED: similar to nuclear po... 36 0.72
UniRef50_UPI0000E80427 Cluster: PREDICTED: hypothetical protein;... 36 0.72
UniRef50_Q7ZJ30 Cluster: Gag polyprotein; n=1; Simian immunodefi... 36 0.72
UniRef50_Q6QGV3 Cluster: Gag protein; n=1; Simian immunodeficien... 36 0.72
UniRef50_A7CV72 Cluster: Putative uncharacterized protein precur... 36 0.72
UniRef50_Q0J529 Cluster: Os08g0473300 protein; n=7; Oryza sativa... 36 0.72
UniRef50_Q9GV13 Cluster: Vasa-related protein CnVAS1; n=3; Eumet... 36 0.72
UniRef50_A3FMR2 Cluster: Gag-like protein; n=1; Biomphalaria gla... 36 0.72
UniRef50_A7EH53 Cluster: Predicted protein; n=6; Sclerotinia scl... 36 0.72
UniRef50_A6RCU0 Cluster: Predicted protein; n=8; Ajellomyces cap... 36 0.72
UniRef50_P03347 Cluster: Gag polyprotein (Pr55Gag) [Contains: Ma... 36 0.72
UniRef50_UPI00015B4AC1 Cluster: PREDICTED: similar to conserved ... 35 0.96
UniRef50_Q0C4K5 Cluster: Conserved domain protein; n=6; Alphapro... 35 0.96
UniRef50_Q5KTM1 Cluster: Reverse transcriptase; n=1; Bombyx mori... 35 0.96
UniRef50_Q24362 Cluster: Putative ORF1; n=2; melanogaster subgro... 35 0.96
UniRef50_Q2H7W0 Cluster: Putative uncharacterized protein; n=2; ... 35 0.96
UniRef50_A6SBR5 Cluster: Putative uncharacterized protein; n=2; ... 35 0.96
UniRef50_A6RFJ6 Cluster: Predicted protein; n=6; Ajellomyces cap... 35 0.96
UniRef50_A6R5U3 Cluster: Predicted protein; n=10; Ajellomyces ca... 35 0.96
UniRef50_A1CUW5 Cluster: Putative uncharacterized protein; n=1; ... 35 0.96
UniRef50_UPI0000D55A74 Cluster: PREDICTED: similar to CG2987-PA,... 35 1.3
UniRef50_Q3IV62 Cluster: Putative uncharacterized protein; n=1; ... 35 1.3
UniRef50_Q015J3 Cluster: Zinc finger, CCHC domain containing 9; ... 35 1.3
UniRef50_A7P7X8 Cluster: Chromosome chr3 scaffold_8, whole genom... 35 1.3
UniRef50_Q8T8R1 Cluster: GM14667p; n=8; Neoptera|Rep: GM14667p -... 35 1.3
UniRef50_Q868S1 Cluster: Gag-like protein; n=1; Anopheles gambia... 35 1.3
UniRef50_A2I3Y2 Cluster: Zinc finger protein-like protein; n=1; ... 35 1.3
UniRef50_A0DH71 Cluster: Chromosome undetermined scaffold_50, wh... 35 1.3
UniRef50_Q59FF8 Cluster: CUB and Sushi multiple domains 1 varian... 35 1.3
UniRef50_Q96PZ7 Cluster: CUB and sushi domain-containing protein... 35 1.3
UniRef50_UPI00015B43D2 Cluster: PREDICTED: similar to gag-like p... 34 1.7
UniRef50_UPI0000EBE74E Cluster: PREDICTED: hypothetical protein;... 34 1.7
UniRef50_UPI00006A2972 Cluster: UPI00006A2972 related cluster; n... 34 1.7
UniRef50_Q21M26 Cluster: Glycogen synthase-like protein; n=1; Sa... 34 1.7
UniRef50_A5NU64 Cluster: LigA precursor; n=1; Methylobacterium s... 34 1.7
UniRef50_A3WVH4 Cluster: Outer membrane autotransporter barrel p... 34 1.7
UniRef50_Q867Z5 Cluster: Gag protein; n=1; Drosophila virilis|Re... 34 1.7
UniRef50_Q4W7T7 Cluster: VASA RNA helicase; n=3; Daphniidae|Rep:... 34 1.7
UniRef50_Q179G6 Cluster: Putative uncharacterized protein; n=3; ... 34 1.7
UniRef50_Q5EBM5 Cluster: PB1 protein; n=32; Euteleostomi|Rep: PB... 34 1.7
UniRef50_A1CXG6 Cluster: Putative uncharacterized protein; n=4; ... 34 1.7
UniRef50_Q86U86 Cluster: Protein polybromo-1; n=50; Euteleostomi... 34 1.7
UniRef50_UPI00015B4390 Cluster: PREDICTED: similar to putative r... 34 2.2
UniRef50_UPI0000D578AA Cluster: PREDICTED: similar to Nucleic-ac... 34 2.2
UniRef50_UPI00015A3CBD Cluster: Zinc finger CCHC domain-containi... 34 2.2
UniRef50_Q4RUZ2 Cluster: Chromosome 12 SCAF14993, whole genome s... 34 2.2
UniRef50_Q82GP8 Cluster: Putative uncharacterized protein; n=2; ... 34 2.2
UniRef50_Q5YQ82 Cluster: Putative uncharacterized protein; n=1; ... 34 2.2
UniRef50_Q28SA4 Cluster: Putative uncharacterized protein; n=1; ... 34 2.2
UniRef50_Q12B87 Cluster: Secretion protein HlyD precursor; n=3; ... 34 2.2
UniRef50_O05478 Cluster: LipA transcriptional activator; n=1; St... 34 2.2
UniRef50_A2Q5K8 Cluster: Zinc finger, CCHC-type; n=1; Medicago t... 34 2.2
UniRef50_Q93138 Cluster: ORF1; n=1; Bombyx mori|Rep: ORF1 - Bomb... 34 2.2
UniRef50_Q7PP02 Cluster: ENSANGP00000017688; n=1; Anopheles gamb... 34 2.2
UniRef50_P91776 Cluster: Pacifastin light chain precursor; n=1; ... 34 2.2
UniRef50_Q2H1R0 Cluster: Putative uncharacterized protein; n=5; ... 34 2.2
UniRef50_UPI0000D5776C Cluster: PREDICTED: similar to Nucleic-ac... 33 2.9
UniRef50_UPI000049964B Cluster: zinc finger protein; n=1; Entamo... 33 2.9
UniRef50_UPI000023F0FC Cluster: hypothetical protein FG10143.1; ... 33 2.9
UniRef50_Q76IL0 Cluster: Gag-like protein; n=14; Danio rerio|Rep... 33 2.9
UniRef50_Q2Z0B2 Cluster: TRAP-type C4-dicarboxylate transport sy... 33 2.9
UniRef50_A7B9Z4 Cluster: Putative uncharacterized protein; n=1; ... 33 2.9
UniRef50_Q5ZB52 Cluster: Zinc knuckle containing protein-like; n... 33 2.9
UniRef50_Q4DXU4 Cluster: Putative uncharacterized protein; n=2; ... 33 2.9
UniRef50_Q171K9 Cluster: Toll; n=5; Diptera|Rep: Toll - Aedes ae... 33 2.9
UniRef50_A1IIT5 Cluster: RNA helicase; n=1; Neobenedenia girella... 33 2.9
UniRef50_Q7S2W3 Cluster: Predicted protein; n=1; Neurospora cras... 33 2.9
UniRef50_Q01374 Cluster: Gag-like protein; n=3; Neurospora crass... 33 2.9
UniRef50_Q9IDV9 Cluster: Gag-Pol polyprotein (Pr160Gag-Pol) [Con... 33 2.9
UniRef50_UPI0000F2B495 Cluster: PREDICTED: hypothetical protein;... 33 3.9
UniRef50_UPI0000EBCA9E Cluster: PREDICTED: hypothetical protein;... 33 3.9
UniRef50_UPI0000DA2EC0 Cluster: PREDICTED: hypothetical protein;... 33 3.9
UniRef50_UPI0000ECB478 Cluster: PREDICTED: Gallus gallus hypothe... 33 3.9
UniRef50_Q699V2 Cluster: Gag polyprotein; n=8; Simian immunodefi... 33 3.9
UniRef50_Q5XGJ9 Cluster: LOC495203 protein; n=23; Xenopus|Rep: L... 33 3.9
UniRef50_Q05WY2 Cluster: Putative uncharacterized protein; n=1; ... 33 3.9
UniRef50_Q2L3T3 Cluster: POZ domain protein; n=1; Triticum aesti... 33 3.9
UniRef50_Q8MY38 Cluster: Gag-like protein; n=7; Papilio xuthus|R... 33 3.9
UniRef50_Q7R2D9 Cluster: GLP_623_71940_70969; n=1; Giardia lambl... 33 3.9
UniRef50_Q586R7 Cluster: RNA-binding protein, putative; n=5; Try... 33 3.9
UniRef50_A7SJG4 Cluster: Predicted protein; n=1; Nematostella ve... 33 3.9
UniRef50_P62633 Cluster: Cellular nucleic acid-binding protein; ... 33 3.9
UniRef50_UPI00015B4DBC Cluster: PREDICTED: similar to polyprotei... 33 5.1
UniRef50_UPI0000F1FB24 Cluster: PREDICTED: similar to novel tran... 33 5.1
UniRef50_UPI0000E4A1A5 Cluster: PREDICTED: similar to Sec23 inte... 33 5.1
UniRef50_UPI0000D57973 Cluster: PREDICTED: hypothetical protein,... 33 5.1
UniRef50_Q9Q5K9 Cluster: NTR; n=1; Cercopithecine herpesvirus 12... 33 5.1
UniRef50_Q21BF0 Cluster: Putative uncharacterized protein; n=1; ... 33 5.1
UniRef50_A7HGS4 Cluster: Peptidase M23B; n=1; Anaeromyxobacter s... 33 5.1
UniRef50_A4KIV4 Cluster: Conserved integral membrane protein; n=... 33 5.1
UniRef50_Q8LK28 Cluster: Putative DNA/RNA binding protein; n=1; ... 33 5.1
UniRef50_A4RXZ9 Cluster: Predicted protein; n=2; Ostreococcus|Re... 33 5.1
UniRef50_A2I5E5 Cluster: Retrotransposon protein; n=1; Beta vulg... 33 5.1
UniRef50_Q8MY21 Cluster: Gag-like protein; n=2; Forficula scudde... 33 5.1
UniRef50_Q22BL5 Cluster: Insect antifreeze protein; n=1; Tetrahy... 33 5.1
UniRef50_Q16NU8 Cluster: Putative uncharacterized protein; n=2; ... 33 5.1
UniRef50_A7S951 Cluster: Predicted protein; n=1; Nematostella ve... 33 5.1
UniRef50_A4H7S6 Cluster: Hypthetical protein, conserved; n=1; Le... 33 5.1
UniRef50_Q6C9D6 Cluster: Yarrowia lipolytica chromosome D of str... 33 5.1
UniRef50_Q8TF72 Cluster: Protein Shroom3; n=8; Eutheria|Rep: Pro... 33 5.1
UniRef50_Q9NBX5 Cluster: Nucleic-acid-binding protein from trans... 33 5.1
UniRef50_P21330 Cluster: Nucleic-acid-binding protein from mobil... 33 5.1
UniRef50_A0PI26 Cluster: ASABF-like antimicrobial protein; n=1; ... 32 6.8
UniRef50_Q8YDQ0 Cluster: ALDEHYDE DEHYDROGENASE; n=1; Brucella m... 32 6.8
UniRef50_Q2JGX9 Cluster: Peptidase S1 and S6, chymotrypsin/Hap; ... 32 6.8
UniRef50_Q2J552 Cluster: Peptide deformylase; n=2; Frankia|Rep: ... 32 6.8
UniRef50_Q3VZ34 Cluster: Putative uncharacterized protein; n=1; ... 32 6.8
UniRef50_A4FPN6 Cluster: PE-PGRS family protein; n=1; Saccharopo... 32 6.8
UniRef50_A3VHH8 Cluster: Putative uncharacterized protein; n=1; ... 32 6.8
UniRef50_A0L4C7 Cluster: Tetratricopeptide TPR_2 repeat protein;... 32 6.8
UniRef50_Q9LU44 Cluster: Similarity to transcription or splicing... 32 6.8
UniRef50_Q2QLK1 Cluster: Retrotransposon protein, putative, uncl... 32 6.8
UniRef50_Q01LI0 Cluster: OSIGBa0134J07.9 protein; n=20; Spermato... 32 6.8
UniRef50_Q6UJ38 Cluster: Gag protein; n=4; Drosophila virilis|Re... 32 6.8
UniRef50_Q4Q1R3 Cluster: Universal minicircle sequence binding p... 32 6.8
UniRef50_Q4DSE8 Cluster: Putative uncharacterized protein; n=2; ... 32 6.8
UniRef50_A7SP17 Cluster: Predicted protein; n=1; Nematostella ve... 32 6.8
UniRef50_A7L494 Cluster: Putative zinc finger protein; n=1; Arte... 32 6.8
UniRef50_Q9C4A4 Cluster: Gag-like protein; n=3; Tricholoma matsu... 32 6.8
UniRef50_Q6C7Q8 Cluster: Similar to tr|Q95JC9 Sus scrofa Basic p... 32 6.8
UniRef50_P18041 Cluster: Gag polyprotein (Pr55Gag) [Contains: Ma... 32 6.8
UniRef50_UPI00015B4869 Cluster: PREDICTED: similar to polyprotei... 32 8.9
UniRef50_UPI0000EBE03A Cluster: PREDICTED: hypothetical protein;... 32 8.9
UniRef50_UPI0000E484DF Cluster: PREDICTED: hypothetical protein;... 32 8.9
UniRef50_UPI00006CE5F7 Cluster: ABC transporter family protein; ... 32 8.9
UniRef50_UPI00005A49CD Cluster: PREDICTED: hypothetical protein ... 32 8.9
UniRef50_UPI0000F34884 Cluster: UPI0000F34884 related cluster; n... 32 8.9
UniRef50_UPI0000F31397 Cluster: UPI0000F31397 related cluster; n... 32 8.9
UniRef50_Q9DUC5 Cluster: ORF2; n=1; Torque teno virus|Rep: ORF2 ... 32 8.9
UniRef50_Q8PMB4 Cluster: Putative uncharacterized protein XAC151... 32 8.9
UniRef50_Q82CS6 Cluster: Putative uncharacterized protein; n=1; ... 32 8.9
UniRef50_Q4UPK4 Cluster: Putative uncharacterized protein; n=5; ... 32 8.9
UniRef50_A7HBV2 Cluster: Dehydrogenase complex catalytic domain;... 32 8.9
UniRef50_A7CTG6 Cluster: TatD-related deoxyribonuclease; n=1; Op... 32 8.9
UniRef50_A1TQ54 Cluster: ATP dependent DNA ligase; n=1; Acidovor... 32 8.9
UniRef50_A0NQ34 Cluster: Putative uncharacterized protein; n=1; ... 32 8.9
UniRef50_Q9S9R4 Cluster: F28J9.15 protein; n=1; Arabidopsis thal... 32 8.9
UniRef50_Q69F89 Cluster: Gag-pol polyprotein; n=1; Phaseolus vul... 32 8.9
UniRef50_Q53PL2 Cluster: Hydroxyproline-rich glycoprotein DZ-HRG... 32 8.9
UniRef50_A3A731 Cluster: Putative uncharacterized protein; n=2; ... 32 8.9
UniRef50_Q9BLI5 Cluster: TRAS3 protein; n=7; Bombycoidea|Rep: TR... 32 8.9
UniRef50_Q8MY24 Cluster: Gag-like protein; n=2; Forficula scudde... 32 8.9
UniRef50_Q6J4U8 Cluster: Gag protein; n=8; Drosophila melanogast... 32 8.9
UniRef50_O76962 Cluster: Putative chimeric R1/R2 retrotransposon... 32 8.9
UniRef50_A3EXK5 Cluster: Fibroblast growth factor receptor b; n=... 32 8.9
UniRef50_Q7S415 Cluster: Predicted protein; n=1; Neurospora cras... 32 8.9
UniRef50_Q2TXY4 Cluster: Predicted protein; n=2; Aspergillus ory... 32 8.9
UniRef50_Q0U9H2 Cluster: Putative uncharacterized protein; n=1; ... 32 8.9
UniRef50_A7BIR9 Cluster: Gag protein; n=1; Lentinula edodes|Rep:... 32 8.9
UniRef50_O94855 Cluster: Protein transport protein Sec24D; n=11;... 32 8.9
UniRef50_P28284 Cluster: Trans-acting transcriptional protein IC... 32 8.9
>UniRef50_Q7M4J4 Cluster: RNA-directed DNA polymerase (EC 2.7.7.49)
homolog; n=3; Bombyx mori|Rep: RNA-directed DNA
polymerase (EC 2.7.7.49) homolog - Bombyx mori (Silk
moth)
Length = 1051
Score = 181 bits (441), Expect = 8e-45
Identities = 84/84 (100%), Positives = 84/84 (100%)
Frame = -3
Query: 253 PRLRIGQINLGGAEDATRELPSIARDLGLDIVLVQEQYSMVGFLAQCGAHPKAGVYIRNR 74
PRLRIGQINLGGAEDATRELPSIARDLGLDIVLVQEQYSMVGFLAQCGAHPKAGVYIRNR
Sbjct: 9 PRLRIGQINLGGAEDATRELPSIARDLGLDIVLVQEQYSMVGFLAQCGAHPKAGVYIRNR 68
Query: 73 VLPCAVLHHLSSTHITVVHIGGWD 2
VLPCAVLHHLSSTHITVVHIGGWD
Sbjct: 69 VLPCAVLHHLSSTHITVVHIGGWD 92
>UniRef50_Q5NTZ1 Cluster: Non-LTR retrotransposon R1Bmks ORF1
protein; n=2; Bombyx mori|Rep: Non-LTR retrotransposon
R1Bmks ORF1 protein - Bombyx mori (Silk moth)
Length = 458
Score = 153 bits (371), Expect = 2e-36
Identities = 68/86 (79%), Positives = 68/86 (79%)
Frame = -2
Query: 515 TDFVRVTCCNKCQQYGHPEKFCRAKEATCGRCGEDGHRMEXXXXXXXXXXXXXXXXXXAM 336
TDFVRVTCCNKCQQYGHPEKFCRAKEATCGRCGEDGHRME AM
Sbjct: 373 TDFVRVTCCNKCQQYGHPEKFCRAKEATCGRCGEDGHRMEACKAASACCATCRRFRREAM 432
Query: 335 HPTASRDCPARRHAEERFLNQVEYGY 258
HPTASRDCPARRHAEERFLNQVEYGY
Sbjct: 433 HPTASRDCPARRHAEERFLNQVEYGY 458
>UniRef50_Q2GR87 Cluster: Putative uncharacterized protein; n=2;
Chaetomium globosum|Rep: Putative uncharacterized
protein - Chaetomium globosum (Soil fungus)
Length = 1101
Score = 41.1 bits (92), Expect = 0.015
Identities = 28/85 (32%), Positives = 36/85 (42%), Gaps = 9/85 (10%)
Frame = -2
Query: 506 VRVTCCNKCQQYGHPEKFCRAKEATCGRC-----GEDGHRMEXXXXXXXXXXXXXXXXXX 342
++VT C KC ++GH +FC+ K ATC RC GE G E
Sbjct: 129 LQVTQCYKCWRWGHTHRFCKGK-ATCPRCAAGVHGEGGRAGEAQYPTLENRIPLRCTACG 187
Query: 341 AMHPTASRDCP----ARRHAEERFL 279
HP R CP AR A E ++
Sbjct: 188 GRHPAWVRWCPEAVKARGAAREAYI 212
>UniRef50_UPI0000E4A204 Cluster: PREDICTED: similar to zinc finger
protein; n=1; Strongylocentrotus purpuratus|Rep:
PREDICTED: similar to zinc finger protein -
Strongylocentrotus purpuratus
Length = 257
Score = 40.7 bits (91), Expect = 0.019
Identities = 18/35 (51%), Positives = 22/35 (62%), Gaps = 2/35 (5%)
Frame = -2
Query: 503 RVTCCNKCQQYGHPEKFCR--AKEATCGRCGEDGH 405
R T C KC Q+GH + C+ A+E C RCGE GH
Sbjct: 47 RDTRCYKCNQFGHRARDCQDTAEEDLCYRCGEPGH 81
>UniRef50_P16424 Cluster: Uncharacterized 50 kDa protein in type I
retrotransposable element R1DM; n=2; Drosophila|Rep:
Uncharacterized 50 kDa protein in type I
retrotransposable element R1DM - Drosophila melanogaster
(Fruit fly)
Length = 471
Score = 40.7 bits (91), Expect = 0.019
Identities = 14/34 (41%), Positives = 20/34 (58%)
Frame = -2
Query: 506 VRVTCCNKCQQYGHPEKFCRAKEATCGRCGEDGH 405
VR C++C + H CR KE+ C +CG+ GH
Sbjct: 394 VRTYACHRCVGFDHKVSECRQKESVCRQCGQQGH 427
>UniRef50_UPI0000E49DCE Cluster: PREDICTED: hypothetical protein;
n=1; Strongylocentrotus purpuratus|Rep: PREDICTED:
hypothetical protein - Strongylocentrotus purpuratus
Length = 421
Score = 39.9 bits (89), Expect = 0.034
Identities = 17/33 (51%), Positives = 21/33 (63%), Gaps = 2/33 (6%)
Frame = -2
Query: 497 TCCNKCQQYGHPEKFCR--AKEATCGRCGEDGH 405
T C KC Q+GH + C+ A+E C RCGE GH
Sbjct: 213 TRCYKCNQFGHRARDCQDTAEEDLCYRCGEPGH 245
>UniRef50_Q5TW75 Cluster: ENSANGP00000025446; n=1; Anopheles gambiae
str. PEST|Rep: ENSANGP00000025446 - Anopheles gambiae
str. PEST
Length = 266
Score = 39.9 bits (89), Expect = 0.034
Identities = 16/35 (45%), Positives = 20/35 (57%)
Frame = -2
Query: 509 FVRVTCCNKCQQYGHPEKFCRAKEATCGRCGEDGH 405
+ R CCN C Q+GH + C+ E TC CGE H
Sbjct: 120 YPRPMCCNTCLQFGHIKNNCKNGE-TCATCGEKTH 153
>UniRef50_A1D100 Cluster: FAD binding domain protein; n=4;
Trichocomaceae|Rep: FAD binding domain protein -
Neosartorya fischeri (strain ATCC 1020 / DSM 3700 / NRRL
181)(Aspergillus fischerianus (strain ATCC 1020 / DSM
3700 / NRRL 181))
Length = 1100
Score = 38.3 bits (85), Expect = 0.10
Identities = 17/35 (48%), Positives = 19/35 (54%)
Frame = -2
Query: 500 VTCCNKCQQYGHPEKFCRAKEATCGRCGEDGHRME 396
VT C CQ YGH + CRA + CG C GH E
Sbjct: 1037 VTRCFNCQGYGHAARSCRANK-KCGFCAAGGHSHE 1070
>UniRef50_UPI0000F30C93 Cluster: UPI0000F30C93 related cluster; n=1;
Bos taurus|Rep: UPI0000F30C93 UniRef100 entry - Bos
Taurus
Length = 582
Score = 37.9 bits (84), Expect = 0.14
Identities = 28/90 (31%), Positives = 39/90 (43%), Gaps = 1/90 (1%)
Frame = +2
Query: 197 LPRRILCTTQ-IDLANTKSGPNIHTRPDLGSAPPHAGAPDSRARPSGA*PRDGIAGRSHS 373
LPRR+ T++ + GP T G+ PP G S +RP+G P +G RS +
Sbjct: 208 LPRRLGSTSRPAGTWPPEGGPARSTSRPAGTWPPEGGPARSTSRPAGTWPPEGDRARS-T 266
Query: 374 TRRLPYRPPFGGHPLHIGHRWPPWPGKISP 463
+R PP GG WP + P
Sbjct: 267 SRPAGTWPPEGGPARSTSRPAGTWPPEGGP 296
Score = 33.9 bits (74), Expect = 2.2
Identities = 28/73 (38%), Positives = 35/73 (47%), Gaps = 4/73 (5%)
Frame = +2
Query: 266 TRPDLGSAPPHAGAPDSRARPSGA*PRDGIAGRSHSTRRLPYRPPFGGHPLHIGHR---- 433
+RP G+ PP S + P+G PR+G RS ++R PP GG P R
Sbjct: 335 SRP-AGTWPPEGDRARSTSPPAGTWPREGDRARS-TSRPAGTWPPEGG-PARSTSRPAGT 391
Query: 434 WPPWPGKISPGDH 472
WPP G SP DH
Sbjct: 392 WPP-EGGPSPVDH 403
Score = 33.1 bits (72), Expect = 3.9
Identities = 21/68 (30%), Positives = 28/68 (41%)
Frame = +2
Query: 245 KSGPNIHTRPDLGSAPPHAGAPDSRARPSGA*PRDGIAGRSHSTRRLPYRPPFGGHPLHI 424
+ GP T G+ PP G S +RP+G P +G RS ++R PP G
Sbjct: 276 EGGPARSTSRPAGTWPPEGGPARSTSRPAGTWPPEGDRARS-TSRPAGTWPPEGDRARST 334
Query: 425 GHRWPPWP 448
WP
Sbjct: 335 SRPAGTWP 342
>UniRef50_Q2HHK9 Cluster: Predicted protein; n=1; Chaetomium
globosum|Rep: Predicted protein - Chaetomium globosum
(Soil fungus)
Length = 259
Score = 37.9 bits (84), Expect = 0.14
Identities = 15/34 (44%), Positives = 21/34 (61%)
Frame = -2
Query: 506 VRVTCCNKCQQYGHPEKFCRAKEATCGRCGEDGH 405
++ T C KC +GH ++FC+ K ATC RC H
Sbjct: 116 LQATQCYKCWGWGHTQRFCKGK-ATCPRCAAGVH 148
>UniRef50_Q2GYS3 Cluster: Putative uncharacterized protein; n=1;
Chaetomium globosum|Rep: Putative uncharacterized
protein - Chaetomium globosum (Soil fungus)
Length = 1206
Score = 37.5 bits (83), Expect = 0.18
Identities = 15/31 (48%), Positives = 18/31 (58%)
Frame = -2
Query: 497 TCCNKCQQYGHPEKFCRAKEATCGRCGEDGH 405
T C +CQ+ GH C+ K CGRC E GH
Sbjct: 375 TQCYRCQEIGHKAFACK-KPQRCGRCAEQGH 404
>UniRef50_Q8AII1 Cluster: Gag-Pol polyprotein (Pr160Gag-Pol)
[Contains: Matrix protein p17 (MA); Capsid protein p24
(CA); Nucleocapsid protein p7 (NC); p6-pol (p6*);
Protease (EC 3.4.23.16) (Retropepsin) (PR); Reverse
transcriptase/ribonuclease H (EC 2.7.7.49) (EC 2.7.7.7)
(EC 3.1.26.4) (p66 RT); p51 RT; p15; Integrase (IN)];
n=133; Primate lentivirus group|Rep: Gag-Pol polyprotein
(Pr160Gag-Pol) [Contains: Matrix protein p17 (MA);
Capsid protein p24 (CA); Nucleocapsid protein p7 (NC);
p6-pol (p6*); Protease (EC 3.4.23.16) (Retropepsin)
(PR); Reverse transcriptase/ribonuclease H (EC 2.7.7.49)
(EC 2.7.7.7) (EC 3.1.26.4) (p66 RT); p51 RT; p15;
Integrase (IN)] - Simian immunodeficiency virus (isolate
TAN1) (SIV-cpz) (Chimpanzeeimmunodeficiency virus)
Length = 1462
Score = 37.5 bits (83), Expect = 0.18
Identities = 14/33 (42%), Positives = 22/33 (66%), Gaps = 1/33 (3%)
Frame = -2
Query: 491 CNKCQQYGHPEKFCRA-KEATCGRCGEDGHRME 396
C C + GH + CRA ++ C RCG++GH+M+
Sbjct: 419 CFNCGKVGHTARNCRAPRKKGCWRCGQEGHQMK 451
>UniRef50_Q3WGS0 Cluster: Glycoside hydrolase, family 3,
N-terminal:Glycoside hydrolase, family 3, C-terminal;
n=1; Frankia sp. EAN1pec|Rep: Glycoside hydrolase, family
3, N-terminal:Glycoside hydrolase, family 3, C-terminal -
Frankia sp. EAN1pec
Length = 1037
Score = 36.7 bits (81), Expect = 0.31
Identities = 17/38 (44%), Positives = 22/38 (57%), Gaps = 1/38 (2%)
Frame = -2
Query: 227 SGWCRGCDEGATLH-CTGSRPGYCSCTGTIFHGRVPSP 117
SGW G + +T H C G+ P CS TG+ GR P+P
Sbjct: 917 SGWRGGSNRSSTRHPCRGTAPPICSGTGSTSTGRWPAP 954
>UniRef50_A4F6Y2 Cluster: Putative uncharacterized protein; n=1;
Saccharopolyspora erythraea NRRL 2338|Rep: Putative
uncharacterized protein - Saccharopolyspora erythraea
(strain NRRL 23338)
Length = 333
Score = 36.7 bits (81), Expect = 0.31
Identities = 24/72 (33%), Positives = 29/72 (40%), Gaps = 1/72 (1%)
Frame = +2
Query: 251 GPNIHTRPDLGSAPPHAGAPDSRARPSGA*PRDGIAGRSHSTR-RLPYRPPFGGHPLHIG 427
GP H P G HAG +P P G + R + P PP G P H G
Sbjct: 259 GPGPHP-PAQGFPQQHAGPHPGGQQPQQQPPAQGFPPQQPGPRPQAP--PPHGAPPPHGG 315
Query: 428 HRWPPWPGKISP 463
+ PPWP + P
Sbjct: 316 PQQPPWPPQAPP 327
>UniRef50_Q2HI82 Cluster: Putative uncharacterized protein; n=3;
Chaetomium globosum|Rep: Putative uncharacterized
protein - Chaetomium globosum (Soil fungus)
Length = 2049
Score = 36.7 bits (81), Expect = 0.31
Identities = 14/29 (48%), Positives = 17/29 (58%)
Frame = -2
Query: 491 CNKCQQYGHPEKFCRAKEATCGRCGEDGH 405
C +CQ+ GH C+ K CGRC E GH
Sbjct: 800 CYRCQEIGHKAFACK-KPQRCGRCAEQGH 827
>UniRef50_Q2H8L4 Cluster: Putative uncharacterized protein; n=1;
Chaetomium globosum|Rep: Putative uncharacterized
protein - Chaetomium globosum (Soil fungus)
Length = 862
Score = 36.7 bits (81), Expect = 0.31
Identities = 14/29 (48%), Positives = 17/29 (58%)
Frame = -2
Query: 491 CNKCQQYGHPEKFCRAKEATCGRCGEDGH 405
C +CQ+ GH C+ K CGRC E GH
Sbjct: 166 CYRCQEIGHKAFACK-KPQRCGRCAEQGH 193
>UniRef50_Q2GWV4 Cluster: Putative uncharacterized protein; n=4;
Chaetomium globosum|Rep: Putative uncharacterized protein
- Chaetomium globosum (Soil fungus)
Length = 1591
Score = 36.7 bits (81), Expect = 0.31
Identities = 14/29 (48%), Positives = 17/29 (58%)
Frame = -2
Query: 491 CNKCQQYGHPEKFCRAKEATCGRCGEDGH 405
C +CQ+ GH C+ K CGRC E GH
Sbjct: 1362 CYRCQEIGHKAFACK-KPQRCGRCAEQGH 1389
>UniRef50_Q2GU99 Cluster: Putative uncharacterized protein; n=1;
Chaetomium globosum|Rep: Putative uncharacterized
protein - Chaetomium globosum (Soil fungus)
Length = 1393
Score = 36.7 bits (81), Expect = 0.31
Identities = 14/29 (48%), Positives = 17/29 (58%)
Frame = -2
Query: 491 CNKCQQYGHPEKFCRAKEATCGRCGEDGH 405
C +CQ+ GH C+ K CGRC E GH
Sbjct: 322 CYRCQEIGHKAFACK-KPQRCGRCAEQGH 349
>UniRef50_Q2GN74 Cluster: Putative uncharacterized protein; n=3;
Chaetomium globosum|Rep: Putative uncharacterized
protein - Chaetomium globosum (Soil fungus)
Length = 1481
Score = 36.7 bits (81), Expect = 0.31
Identities = 14/29 (48%), Positives = 17/29 (58%)
Frame = -2
Query: 491 CNKCQQYGHPEKFCRAKEATCGRCGEDGH 405
C +CQ+ GH C+ K CGRC E GH
Sbjct: 380 CYRCQEIGHKAFACK-KPQRCGRCAEQGH 407
>UniRef50_Q2GMR4 Cluster: Putative uncharacterized protein; n=1;
Chaetomium globosum|Rep: Putative uncharacterized
protein - Chaetomium globosum (Soil fungus)
Length = 1279
Score = 36.7 bits (81), Expect = 0.31
Identities = 14/29 (48%), Positives = 17/29 (58%)
Frame = -2
Query: 491 CNKCQQYGHPEKFCRAKEATCGRCGEDGH 405
C +CQ+ GH C+ K CGRC E GH
Sbjct: 285 CYRCQEIGHKAFACK-KPQRCGRCAEQGH 312
>UniRef50_Q2GM30 Cluster: Putative uncharacterized protein; n=1;
Chaetomium globosum|Rep: Putative uncharacterized
protein - Chaetomium globosum (Soil fungus)
Length = 1567
Score = 36.7 bits (81), Expect = 0.31
Identities = 14/29 (48%), Positives = 17/29 (58%)
Frame = -2
Query: 491 CNKCQQYGHPEKFCRAKEATCGRCGEDGH 405
C +CQ+ GH C+ K CGRC E GH
Sbjct: 380 CYRCQEIGHKAFACK-KPQRCGRCAEQGH 407
>UniRef50_A7ELY1 Cluster: Putative uncharacterized protein; n=1;
Sclerotinia sclerotiorum 1980|Rep: Putative
uncharacterized protein - Sclerotinia sclerotiorum 1980
Length = 558
Score = 36.7 bits (81), Expect = 0.31
Identities = 27/88 (30%), Positives = 37/88 (42%)
Frame = -2
Query: 503 RVTCCNKCQQYGHPEKFCRAKEATCGRCGEDGHRMEXXXXXXXXXXXXXXXXXXAMHPTA 324
R+ C KCQ+YGH C+A A CG C + H + H
Sbjct: 77 RLKQCYKCQRYGHIGTQCKANTA-CGYCAK-AHNSKDCPDKSDKSTTRNCVVCRGAHEAW 134
Query: 323 SRDCPARRHAEERFLNQVEYGY*APTSY 240
+ CPAR+ EE L++V+ Y A Y
Sbjct: 135 NNRCPARK--EE--LSKVKAAYDARQPY 158
>UniRef50_Q9N9Z2 Cluster: Gag-like protein; n=1; Drosophila
melanogaster|Rep: Gag-like protein - Drosophila
melanogaster (Fruit fly)
Length = 488
Score = 36.3 bits (80), Expect = 0.41
Identities = 14/37 (37%), Positives = 23/37 (62%), Gaps = 2/37 (5%)
Frame = -2
Query: 506 VRVTCCNKCQQYGHPEKFCRAKEAT--CGRCGEDGHR 402
VR C +C ++GH +C++ + + C RCGE GH+
Sbjct: 404 VRPIRCFRCLEFGHRAPYCKSVDRSDCCLRCGEHGHK 440
>UniRef50_Q7JQ89 Cluster: CnjB protein; n=3; Tetrahymena
thermophila|Rep: CnjB protein - Tetrahymena thermophila
Length = 1748
Score = 36.3 bits (80), Expect = 0.41
Identities = 15/32 (46%), Positives = 20/32 (62%), Gaps = 3/32 (9%)
Frame = -2
Query: 491 CNKCQQYGHPEKFC---RAKEATCGRCGEDGH 405
C KC Q GH K C + K++ C +CGE+GH
Sbjct: 1478 CFKCNQEGHMSKDCPNQQQKKSGCFKCGEEGH 1509
Score = 32.3 bits (70), Expect = 6.8
Identities = 14/33 (42%), Positives = 17/33 (51%), Gaps = 3/33 (9%)
Frame = -2
Query: 491 CNKCQQYGHPEKFC---RAKEATCGRCGEDGHR 402
C C Q GH K C K+ C CGE+GH+
Sbjct: 1579 CFNCNQEGHMSKDCPNPSQKKKGCFNCGEEGHQ 1611
>UniRef50_Q1ZBI3 Cluster: Putative uncharacterized protein; n=1;
Psychromonas sp. CNPT3|Rep: Putative uncharacterized
protein - Psychromonas sp. CNPT3
Length = 270
Score = 35.9 bits (79), Expect = 0.55
Identities = 13/28 (46%), Positives = 17/28 (60%)
Frame = -2
Query: 503 RVTCCNKCQQYGHPEKFCRAKEATCGRC 420
+V C+KC + GH E FC K CG+C
Sbjct: 17 KVAACSKCSRIGHAESFCTHK-TCCGKC 43
Score = 32.7 bits (71), Expect = 5.1
Identities = 12/33 (36%), Positives = 17/33 (51%)
Frame = -2
Query: 497 TCCNKCQQYGHPEKFCRAKEATCGRCGEDGHRM 399
TCC KC+ H + C+A C C +D H +
Sbjct: 38 TCCGKCKGT-HATEECKASSQKCSHCRDDWHEV 69
>UniRef50_A6N214 Cluster: Putative uncharacterized protein; n=1;
Microbacterium phage Min1|Rep: Putative uncharacterized
protein - Microbacterium phage Min1
Length = 312
Score = 35.9 bits (79), Expect = 0.55
Identities = 24/59 (40%), Positives = 28/59 (47%), Gaps = 1/59 (1%)
Frame = +2
Query: 248 SGPNIHTRPDLGSAPPHAGAPDSRARPSG-A*PRDGIAGRSHSTRRLPYRPPFGGHPLH 421
SG H+ D PP G PD R RP G P G G + + R P+ P G HPLH
Sbjct: 232 SGHRAHSWADRPPHPPGCGVPDER-RPDGEQQPGQGGDGGADAGCR-PHPPHRGSHPLH 288
>UniRef50_O44312 Cluster: Gag-like zinc-finger protein; n=1;
Drosophila mercatorum mercatorum|Rep: Gag-like
zinc-finger protein - Drosophila mercatorum mercatorum
Length = 438
Score = 35.9 bits (79), Expect = 0.55
Identities = 13/30 (43%), Positives = 16/30 (53%)
Frame = -2
Query: 491 CNKCQQYGHPEKFCRAKEATCGRCGEDGHR 402
C KC + H CR E C +CG+ GHR
Sbjct: 366 CYKCVSFDHRVAQCRMNEEICRQCGQAGHR 395
>UniRef50_Q5KGW6 Cluster: DNA-binding protein hexbp, putative; n=2;
Fungi/Metazoa group|Rep: DNA-binding protein hexbp,
putative - Cryptococcus neoformans (Filobasidiella
neoformans)
Length = 204
Score = 35.9 bits (79), Expect = 0.55
Identities = 15/33 (45%), Positives = 17/33 (51%)
Frame = -2
Query: 503 RVTCCNKCQQYGHPEKFCRAKEATCGRCGEDGH 405
R + C KC Q GH C A+ TC CG GH
Sbjct: 6 RGSSCFKCGQQGHVAAACPAEAPTCYNCGLSGH 38
>UniRef50_A7EVG0 Cluster: Reverse transcriptase; n=8; Sclerotinia
sclerotiorum 1980|Rep: Reverse transcriptase -
Sclerotinia sclerotiorum 1980
Length = 1708
Score = 35.9 bits (79), Expect = 0.55
Identities = 13/27 (48%), Positives = 18/27 (66%)
Frame = -2
Query: 497 TCCNKCQQYGHPEKFCRAKEATCGRCG 417
T C KCQ +GH + CR ++ +CG CG
Sbjct: 416 TQCQKCQGFGHQDTHCR-RDPSCGLCG 441
>UniRef50_A7EM46 Cluster: Predicted protein; n=3; Sclerotinia
sclerotiorum 1980|Rep: Predicted protein - Sclerotinia
sclerotiorum 1980
Length = 396
Score = 35.9 bits (79), Expect = 0.55
Identities = 13/27 (48%), Positives = 18/27 (66%)
Frame = -2
Query: 497 TCCNKCQQYGHPEKFCRAKEATCGRCG 417
T C KCQ +GH + CR ++ +CG CG
Sbjct: 315 TQCQKCQGFGHQDTHCR-RDPSCGLCG 340
>UniRef50_A7EJQ1 Cluster: Putative uncharacterized protein; n=1;
Sclerotinia sclerotiorum 1980|Rep: Putative
uncharacterized protein - Sclerotinia sclerotiorum 1980
Length = 906
Score = 35.9 bits (79), Expect = 0.55
Identities = 13/27 (48%), Positives = 18/27 (66%)
Frame = -2
Query: 497 TCCNKCQQYGHPEKFCRAKEATCGRCG 417
T C KCQ +GH + CR ++ +CG CG
Sbjct: 315 TQCQKCQGFGHQDTHCR-RDPSCGLCG 340
>UniRef50_UPI00015559F4 Cluster: PREDICTED: similar to nuclear pore
membrane glycoprotein 210-like (LOC91181); n=1;
Ornithorhynchus anatinus|Rep: PREDICTED: similar to
nuclear pore membrane glycoprotein 210-like (LOC91181) -
Ornithorhynchus anatinus
Length = 531
Score = 35.5 bits (78), Expect = 0.72
Identities = 30/83 (36%), Positives = 34/83 (40%), Gaps = 5/83 (6%)
Frame = +2
Query: 281 GSAPPHAGAPDSRARPSGA*PRDGIAGRSHSTRRLPYRPPFG-----GHPLHIGHRWPPW 445
G+A H P SR RP G G R T P P G G P H +PP
Sbjct: 164 GTASLHCFCP-SRGRPLGH-REAGEPPRPTRTSPPPAGPFSGCPGRPGDPCHAAAPFPPV 221
Query: 446 PGKISPGDHIADTYCSRSPGQSP 514
PG PG DT +R G+SP
Sbjct: 222 PGSPCPGPGATDTGPARPTGRSP 244
>UniRef50_UPI0000E80427 Cluster: PREDICTED: hypothetical protein;
n=1; Gallus gallus|Rep: PREDICTED: hypothetical protein
- Gallus gallus
Length = 279
Score = 35.5 bits (78), Expect = 0.72
Identities = 20/58 (34%), Positives = 27/58 (46%)
Frame = +3
Query: 48 WCRTAQGSTLLRIYTPALGCAPHWARNPTMEYCSCTRTISRPRSRAMEGSSLVASSAP 221
WCR GST L + G AP W N E C R P++R+ + +VA+ P
Sbjct: 46 WCRWGSGSTAL-----SAGAAPSWLSN--AESCPADRLRLLPKTRSTSSAKVVAAGLP 96
>UniRef50_Q7ZJ30 Cluster: Gag polyprotein; n=1; Simian
immunodeficiency virus - mon|Rep: Gag polyprotein -
Simian immunodeficiency virus - mon
Length = 192
Score = 35.5 bits (78), Expect = 0.72
Identities = 14/30 (46%), Positives = 18/30 (60%), Gaps = 1/30 (3%)
Frame = -2
Query: 491 CNKCQQYGHPEKFCRAKEAT-CGRCGEDGH 405
C C ++GH K C A T C RCG++GH
Sbjct: 70 CYNCGKFGHVAKNCTAPRKTGCFRCGKEGH 99
>UniRef50_Q6QGV3 Cluster: Gag protein; n=1; Simian immunodeficiency
virus|Rep: Gag protein - Simian immunodeficiency virus
(isolate CPZ GAB1) (SIV-cpz) (Chimpanzeeimmunodeficiency
virus)
Length = 140
Score = 35.5 bits (78), Expect = 0.72
Identities = 13/33 (39%), Positives = 21/33 (63%), Gaps = 1/33 (3%)
Frame = -2
Query: 491 CNKCQQYGHPEKFCRA-KEATCGRCGEDGHRME 396
C C + GH + CRA ++ C +CG+ GH+M+
Sbjct: 42 CFNCGKIGHTARNCRAPRKQGCWKCGQQGHQMK 74
>UniRef50_A7CV72 Cluster: Putative uncharacterized protein
precursor; n=1; Opitutaceae bacterium TAV2|Rep: Putative
uncharacterized protein precursor - Opitutaceae
bacterium TAV2
Length = 565
Score = 35.5 bits (78), Expect = 0.72
Identities = 16/36 (44%), Positives = 17/36 (47%)
Frame = +2
Query: 389 YRPPFGGHPLHIGHRWPPWPGKISPGDHIADTYCSR 496
Y PP GG P H G+ W P PGK P Y R
Sbjct: 241 YHPPRGGPPSHHGNTWRPPPGKRPPAHVYPPRYDGR 276
>UniRef50_Q0J529 Cluster: Os08g0473300 protein; n=7; Oryza sativa
(japonica cultivar-group)|Rep: Os08g0473300 protein -
Oryza sativa subsp. japonica (Rice)
Length = 526
Score = 35.5 bits (78), Expect = 0.72
Identities = 27/81 (33%), Positives = 36/81 (44%), Gaps = 8/81 (9%)
Frame = +2
Query: 197 LPRRILCTTQIDLA---NTKSGPNIHTRPDLGSAPPHAGA-----PDSRARPSGA*PRDG 352
L RRIL +Q+ + P + RPD AG PDSRA P+ A P+ G
Sbjct: 436 LLRRILSLSQVPILCVPGLACQPIVPGRPDRAGPAQRAGGEAQARPDSRAGPARARPKSG 495
Query: 353 IAGRSHSTRRLPYRPPFGGHP 415
+A R +P+ P G P
Sbjct: 496 LAVLGTGQRGVPWAGPSGLGP 516
>UniRef50_Q9GV13 Cluster: Vasa-related protein CnVAS1; n=3;
Eumetazoa|Rep: Vasa-related protein CnVAS1 - Hydra
magnipapillata (Hydra)
Length = 797
Score = 35.5 bits (78), Expect = 0.72
Identities = 15/32 (46%), Positives = 19/32 (59%), Gaps = 3/32 (9%)
Frame = -2
Query: 491 CNKCQQYGHPEKFC---RAKEATCGRCGEDGH 405
C C+Q GH K C + ++ TC RCGE GH
Sbjct: 260 CRICKQSGHFAKDCPDKKPRDDTCRRCGESGH 291
Score = 31.9 bits (69), Expect = 8.9
Identities = 14/34 (41%), Positives = 18/34 (52%), Gaps = 5/34 (14%)
Frame = -2
Query: 491 CNKCQQYGHPEKFC-----RAKEATCGRCGEDGH 405
C KC+Q GH K C TC +CG++GH
Sbjct: 143 CFKCKQEGHMSKDCPQGSGGGGSRTCHKCGKEGH 176
>UniRef50_A3FMR2 Cluster: Gag-like protein; n=1; Biomphalaria
glabrata|Rep: Gag-like protein - Biomphalaria glabrata
(Bloodfluke planorb)
Length = 461
Score = 35.5 bits (78), Expect = 0.72
Identities = 13/29 (44%), Positives = 16/29 (55%)
Frame = -2
Query: 491 CNKCQQYGHPEKFCRAKEATCGRCGEDGH 405
C KCQ YGH C+ + C RC +GH
Sbjct: 193 CFKCQGYGHGAAVCK-RNTVCARCAGEGH 220
>UniRef50_A7EH53 Cluster: Predicted protein; n=6; Sclerotinia
sclerotiorum 1980|Rep: Predicted protein - Sclerotinia
sclerotiorum 1980
Length = 192
Score = 35.5 bits (78), Expect = 0.72
Identities = 12/27 (44%), Positives = 17/27 (62%)
Frame = -2
Query: 491 CNKCQQYGHPEKFCRAKEATCGRCGED 411
CN+CQ +GH E +C+ K CG C +
Sbjct: 117 CNRCQGFGHNESYCK-KPPACGLCSNN 142
>UniRef50_A6RCU0 Cluster: Predicted protein; n=8; Ajellomyces
capsulatus NAm1|Rep: Predicted protein - Ajellomyces
capsulatus NAm1
Length = 1838
Score = 35.5 bits (78), Expect = 0.72
Identities = 15/26 (57%), Positives = 16/26 (61%)
Frame = -2
Query: 491 CNKCQQYGHPEKFCRAKEATCGRCGE 414
C KCQ+YGH C A E TCG C E
Sbjct: 392 CYKCQKYGHIGTQCNANE-TCGYCAE 416
>UniRef50_P03347 Cluster: Gag polyprotein (Pr55Gag) [Contains:
Matrix protein p17 (MA); Capsid protein p24 (CA); Spacer
peptide p2; Nucleocapsid protein p7 (NC); Spacer peptide
p1; p6-gag]; n=1956; Primate lentivirus group|Rep: Gag
polyprotein (Pr55Gag) [Contains: Matrix protein p17
(MA); Capsid protein p24 (CA); Spacer peptide p2;
Nucleocapsid protein p7 (NC); Spacer peptide p1; p6-gag]
- Human immunodeficiency virus type 1 (isolate BH10
group M subtype B)(HIV-1)
Length = 512
Score = 35.5 bits (78), Expect = 0.72
Identities = 13/33 (39%), Positives = 22/33 (66%), Gaps = 1/33 (3%)
Frame = -2
Query: 491 CNKCQQYGHPEKFCRA-KEATCGRCGEDGHRME 396
C C + GH + CRA ++ C +CG++GH+M+
Sbjct: 392 CFNCGKEGHTARNCRAPRKKGCWKCGKEGHQMK 424
>UniRef50_UPI00015B4AC1 Cluster: PREDICTED: similar to conserved
hypothetical protein; n=1; Nasonia vitripennis|Rep:
PREDICTED: similar to conserved hypothetical protein -
Nasonia vitripennis
Length = 1110
Score = 35.1 bits (77), Expect = 0.96
Identities = 26/71 (36%), Positives = 30/71 (42%), Gaps = 4/71 (5%)
Frame = +2
Query: 251 GPNIHTRPDLGSAPPHAGAPDSRARPSGA*PRDGIAGRSHSTRRLPYR--PPFGGHPLHI 424
GP H P G PPH G P P G+ P G++ + R P P GG P H
Sbjct: 537 GPPPHDGPPYGGPPPHHGGPP----PHGSPPHGGMSHGDYPPHRGPPHSGSPHGGPP-HG 591
Query: 425 G--HRWPPWPG 451
G H PP G
Sbjct: 592 GPPHGGPPHGG 602
Score = 34.7 bits (76), Expect = 1.3
Identities = 27/78 (34%), Positives = 33/78 (42%), Gaps = 11/78 (14%)
Frame = +2
Query: 272 PDLGSAPPHAGAP-------DSRARPSGA*PRDGIAGRSHSTRRLPYRPPFGGHPLHIG- 427
P G PPH G P D P G P +G G+ + PP+GG P H G
Sbjct: 497 PPFGGPPPHDGGPPYRGSHHDGGGPPYGGPPHEG-GGQPYGGPPPHDGPPYGGPPPHHGG 555
Query: 428 ---HRWPPWPGKISPGDH 472
H PP G +S GD+
Sbjct: 556 PPPHGSPP-HGGMSHGDY 572
>UniRef50_Q0C4K5 Cluster: Conserved domain protein; n=6;
Alphaproteobacteria|Rep: Conserved domain protein -
Hyphomonas neptunium (strain ATCC 15444)
Length = 460
Score = 35.1 bits (77), Expect = 0.96
Identities = 23/62 (37%), Positives = 28/62 (45%)
Frame = -2
Query: 230 QSGWCRGCDEGATLHCTGSRPGYCSCTGTIFHGRVPSPMWSTPQGGCVYPQ*GAPLRGSA 51
QS C GA+ C PG C+ T+ PSP+ G CV P GAPLR +
Sbjct: 160 QSCGCNCSHHGASPQCPAPMPG-CAVKETLSRPLAPSPV----PGVCVAPLTGAPLRPNP 214
Query: 50 PP 45
P
Sbjct: 215 TP 216
>UniRef50_Q5KTM1 Cluster: Reverse transcriptase; n=1; Bombyx
mori|Rep: Reverse transcriptase - Bombyx mori (Silk
moth)
Length = 535
Score = 35.1 bits (77), Expect = 0.96
Identities = 11/29 (37%), Positives = 19/29 (65%)
Frame = -2
Query: 500 VTCCNKCQQYGHPEKFCRAKEATCGRCGE 414
VT C+ C ++GH K+C + + C +CG+
Sbjct: 240 VTQCSNCWRFGHSAKYCPSTKIFCPKCGK 268
>UniRef50_Q24362 Cluster: Putative ORF1; n=2; melanogaster
subgroup|Rep: Putative ORF1 - Drosophila melanogaster
(Fruit fly)
Length = 426
Score = 35.1 bits (77), Expect = 0.96
Identities = 13/29 (44%), Positives = 17/29 (58%)
Frame = -2
Query: 491 CNKCQQYGHPEKFCRAKEATCGRCGEDGH 405
C KC ++GHP C++ E TC C E H
Sbjct: 188 CKKCLRFGHPTPICKSVE-TCINCSETKH 215
>UniRef50_Q2H7W0 Cluster: Putative uncharacterized protein; n=2;
Chaetomium globosum|Rep: Putative uncharacterized
protein - Chaetomium globosum (Soil fungus)
Length = 1339
Score = 35.1 bits (77), Expect = 0.96
Identities = 14/30 (46%), Positives = 16/30 (53%)
Frame = -2
Query: 491 CNKCQQYGHPEKFCRAKEATCGRCGEDGHR 402
C CQQ GH CR + CG C +GHR
Sbjct: 258 CYNCQQIGHKAFQCRNPQ-VCGMCASEGHR 286
>UniRef50_A6SBR5 Cluster: Putative uncharacterized protein; n=2;
Sclerotiniaceae|Rep: Putative uncharacterized protein -
Botryotinia fuckeliana B05.10
Length = 533
Score = 35.1 bits (77), Expect = 0.96
Identities = 32/127 (25%), Positives = 47/127 (37%), Gaps = 13/127 (10%)
Frame = -2
Query: 500 VTCCNKCQQYGHPEKFCRAK-------EATCGRCGEDGHRMEXXXXXXXXXXXXXXXXXX 342
V C++C + GH K C + + C CGE GHR+
Sbjct: 246 VPLCSRCNELGHTVKHCTEERVDGERVQVQCFNCGEIGHRVRDCPIPREDKFACRNCKKS 305
Query: 341 AMHPTASRDCPARRHAEE---RFLNQV-EYGY*APTSYWPNQSGWCRGCDEGA--TLHCT 180
H +S++CP R AE + N++ + PT G CR C++ CT
Sbjct: 306 G-H--SSKECPEPRSAEGVECKNCNEIGHFSRDCPTG-GGGDGGLCRNCNQPGHRAKDCT 361
Query: 179 GSRPGYC 159
R C
Sbjct: 362 NERVMIC 368
>UniRef50_A6RFJ6 Cluster: Predicted protein; n=6; Ajellomyces
capsulatus NAm1|Rep: Predicted protein - Ajellomyces
capsulatus NAm1
Length = 1163
Score = 35.1 bits (77), Expect = 0.96
Identities = 14/33 (42%), Positives = 18/33 (54%)
Frame = -2
Query: 503 RVTCCNKCQQYGHPEKFCRAKEATCGRCGEDGH 405
+VT C C +YGH +FCR + CG C H
Sbjct: 295 QVTRCFNCHEYGHTARFCR-QAKRCGFCAAKEH 326
>UniRef50_A6R5U3 Cluster: Predicted protein; n=10; Ajellomyces
capsulatus NAm1|Rep: Predicted protein - Ajellomyces
capsulatus NAm1
Length = 1390
Score = 35.1 bits (77), Expect = 0.96
Identities = 14/33 (42%), Positives = 18/33 (54%)
Frame = -2
Query: 503 RVTCCNKCQQYGHPEKFCRAKEATCGRCGEDGH 405
+VT C C +YGH +FCR + CG C H
Sbjct: 295 QVTRCFNCHEYGHTARFCR-QAKRCGFCAAKEH 326
>UniRef50_A1CUW5 Cluster: Putative uncharacterized protein; n=1;
Neosartorya fischeri NRRL 181|Rep: Putative
uncharacterized protein - Neosartorya fischeri (strain
ATCC 1020 / DSM 3700 / NRRL 181)(Aspergillus
fischerianus (strain ATCC 1020 / DSM 3700 / NRRL 181))
Length = 643
Score = 35.1 bits (77), Expect = 0.96
Identities = 18/69 (26%), Positives = 26/69 (37%)
Frame = -2
Query: 503 RVTCCNKCQQYGHPEKFCRAKEATCGRCGEDGHRMEXXXXXXXXXXXXXXXXXXAMHPTA 324
R+ C +C YGH + C A+ TC C + H + H
Sbjct: 299 RLLQCTRCLNYGHAQPVCTAERVTCLYCA-NAHDKKFCKVKGVPSQHRCAVCHGP-HQAD 356
Query: 323 SRDCPARRH 297
S+ CP R+H
Sbjct: 357 SKQCPVRQH 365
>UniRef50_UPI0000D55A74 Cluster: PREDICTED: similar to CG2987-PA,
isoform A; n=2; Endopterygota|Rep: PREDICTED: similar to
CG2987-PA, isoform A - Tribolium castaneum
Length = 1789
Score = 34.7 bits (76), Expect = 1.3
Identities = 15/30 (50%), Positives = 17/30 (56%), Gaps = 1/30 (3%)
Frame = -2
Query: 491 CNKCQQYGHPEKFCRAK-EATCGRCGEDGH 405
CNKC++ GH C K E C CGE GH
Sbjct: 652 CNKCKELGHIALKCPNKLEPKCKLCGEGGH 681
>UniRef50_Q3IV62 Cluster: Putative uncharacterized protein; n=1;
Rhodobacter sphaeroides 2.4.1|Rep: Putative
uncharacterized protein - Rhodobacter sphaeroides
(strain ATCC 17023 / 2.4.1 / NCIB 8253 / DSM158)
Length = 473
Score = 34.7 bits (76), Expect = 1.3
Identities = 32/87 (36%), Positives = 42/87 (48%), Gaps = 1/87 (1%)
Frame = +1
Query: 142 IVPVQEQYPGRDPVQWRVAPSSHPLHHPD*FGQYEVGA*Y-PYST*FRKRSSACRRAGQS 318
IVP E+ GR Q + P+SHPL Q +VGA + P +R A RA
Sbjct: 174 IVPWVEKTSGRRGTQRLIQPTSHPLIASYEAAQDDVGAFFAPLGL---RRGEA--RARAR 228
Query: 319 REAVGCIASRRNRRQVAQHAEAALQAS 399
REA G + R R + A +EA QA+
Sbjct: 229 REAKGAAEAARKRVRDAGGSEAEAQAA 255
>UniRef50_Q015J3 Cluster: Zinc finger, CCHC domain containing 9;
n=2; Ostreococcus|Rep: Zinc finger, CCHC domain
containing 9 - Ostreococcus tauri
Length = 238
Score = 34.7 bits (76), Expect = 1.3
Identities = 14/35 (40%), Positives = 18/35 (51%)
Frame = -2
Query: 509 FVRVTCCNKCQQYGHPEKFCRAKEATCGRCGEDGH 405
++ CC C+ H K C K +C RCGE GH
Sbjct: 129 YINGGCCKICRAKDHLVKDCPHKGDSCIRCGERGH 163
>UniRef50_A7P7X8 Cluster: Chromosome chr3 scaffold_8, whole genome
shotgun sequence; n=2; Vitis vinifera|Rep: Chromosome
chr3 scaffold_8, whole genome shotgun sequence - Vitis
vinifera (Grape)
Length = 246
Score = 34.7 bits (76), Expect = 1.3
Identities = 13/29 (44%), Positives = 14/29 (48%)
Frame = -2
Query: 491 CNKCQQYGHPEKFCRAKEATCGRCGEDGH 405
C CQQ GH + C A C CG GH
Sbjct: 200 CRNCQQLGHMSRDCAAPLMICRNCGGRGH 228
>UniRef50_Q8T8R1 Cluster: GM14667p; n=8; Neoptera|Rep: GM14667p -
Drosophila melanogaster (Fruit fly)
Length = 165
Score = 34.7 bits (76), Expect = 1.3
Identities = 13/29 (44%), Positives = 15/29 (51%)
Frame = -2
Query: 491 CNKCQQYGHPEKFCRAKEATCGRCGEDGH 405
C KC + GH K C TC CG+ GH
Sbjct: 125 CYKCNRTGHISKNCPETSKTCYGCGKSGH 153
Score = 32.7 bits (71), Expect = 5.1
Identities = 12/29 (41%), Positives = 15/29 (51%)
Frame = -2
Query: 491 CNKCQQYGHPEKFCRAKEATCGRCGEDGH 405
C KC Q+GH + C + C RC GH
Sbjct: 57 CYKCNQFGHFARACPEEAERCYRCNGIGH 85
>UniRef50_Q868S1 Cluster: Gag-like protein; n=1; Anopheles
gambiae|Rep: Gag-like protein - Anopheles gambiae
(African malaria mosquito)
Length = 344
Score = 34.7 bits (76), Expect = 1.3
Identities = 19/66 (28%), Positives = 26/66 (39%), Gaps = 2/66 (3%)
Frame = -2
Query: 491 CNKCQQYGHPEKFCRAKEAT--CGRCGEDGHRMEXXXXXXXXXXXXXXXXXXAMHPTASR 318
C KC + GH CR + + C +CG GH+ + +H T S
Sbjct: 277 CYKCWKVGHTSYHCREPDRSNLCWKCGLSGHKKQ--ACTNSVKCLDCGTRSQNLHATGSY 334
Query: 317 DCPARR 300
CP RR
Sbjct: 335 MCPRRR 340
>UniRef50_A2I3Y2 Cluster: Zinc finger protein-like protein; n=1;
Maconellicoccus hirsutus|Rep: Zinc finger protein-like
protein - Maconellicoccus hirsutus (hibiscus mealybug)
Length = 142
Score = 34.7 bits (76), Expect = 1.3
Identities = 13/34 (38%), Positives = 18/34 (52%)
Frame = -2
Query: 506 VRVTCCNKCQQYGHPEKFCRAKEATCGRCGEDGH 405
+R C KC +GH + C+ + C RC E GH
Sbjct: 29 IRREKCYKCNAFGHFARDCKEDQDRCYRCNEIGH 62
>UniRef50_A0DH71 Cluster: Chromosome undetermined scaffold_50, whole
genome shotgun sequence; n=3; Paramecium
tetraurelia|Rep: Chromosome undetermined scaffold_50,
whole genome shotgun sequence - Paramecium tetraurelia
Length = 786
Score = 34.7 bits (76), Expect = 1.3
Identities = 13/30 (43%), Positives = 16/30 (53%)
Frame = -2
Query: 491 CNKCQQYGHPEKFCRAKEATCGRCGEDGHR 402
C KC Q GH K C + C RC + GH+
Sbjct: 147 CFKCNQAGHMAKDCDVEGFKCHRCNKKGHK 176
>UniRef50_Q59FF8 Cluster: CUB and Sushi multiple domains 1 variant;
n=7; Tetrapoda|Rep: CUB and Sushi multiple domains 1
variant - Homo sapiens (Human)
Length = 2966
Score = 34.7 bits (76), Expect = 1.3
Identities = 13/23 (56%), Positives = 15/23 (65%)
Frame = -2
Query: 200 GATLHCTGSRPGYCSCTGTIFHG 132
GA HCTG+ PG+C GT HG
Sbjct: 2324 GALPHCTGNNPGFCGDPGTPAHG 2346
>UniRef50_Q96PZ7 Cluster: CUB and sushi domain-containing protein 1
precursor; n=62; Euteleostomi|Rep: CUB and sushi
domain-containing protein 1 precursor - Homo sapiens
(Human)
Length = 3565
Score = 34.7 bits (76), Expect = 1.3
Identities = 13/23 (56%), Positives = 15/23 (65%)
Frame = -2
Query: 200 GATLHCTGSRPGYCSCTGTIFHG 132
GA HCTG+ PG+C GT HG
Sbjct: 2908 GALPHCTGNNPGFCGDPGTPAHG 2930
>UniRef50_UPI00015B43D2 Cluster: PREDICTED: similar to gag-like
protein, partial; n=1; Nasonia vitripennis|Rep:
PREDICTED: similar to gag-like protein, partial -
Nasonia vitripennis
Length = 456
Score = 34.3 bits (75), Expect = 1.7
Identities = 13/34 (38%), Positives = 19/34 (55%), Gaps = 2/34 (5%)
Frame = -2
Query: 497 TCCNKCQQYGHPEKFCRA--KEATCGRCGEDGHR 402
T C +C YGH + C+ + A C +CG GH+
Sbjct: 353 TRCYRCLGYGHVKARCKGPDRNANCWKCGASGHK 386
>UniRef50_UPI0000EBE74E Cluster: PREDICTED: hypothetical protein;
n=1; Bos taurus|Rep: PREDICTED: hypothetical protein -
Bos taurus
Length = 299
Score = 34.3 bits (75), Expect = 1.7
Identities = 26/74 (35%), Positives = 31/74 (41%), Gaps = 3/74 (4%)
Frame = +2
Query: 254 PNIHTRPDLGSAP-PHAGAPDSRARPSGA--*PRDGIAGRSHSTRRLPYRPPFGGHPLHI 424
P+ RP L + P PH G P +R PS P G+AG S P RP G +
Sbjct: 223 PSPAPRPRLRTLPLPHCGPPGARPHPSAPAFAPSTGVAGLSP-----PLRPAGGCALQGL 277
Query: 425 GHRWPPWPGKISPG 466
G R W PG
Sbjct: 278 GSRCRAWAAAAGPG 291
>UniRef50_UPI00006A2972 Cluster: UPI00006A2972 related cluster; n=1;
Xenopus tropicalis|Rep: UPI00006A2972 UniRef100 entry -
Xenopus tropicalis
Length = 368
Score = 34.3 bits (75), Expect = 1.7
Identities = 13/31 (41%), Positives = 18/31 (58%)
Frame = -2
Query: 491 CNKCQQYGHPEKFCRAKEATCGRCGEDGHRM 399
C +C+QYGH + C A C CG+ GH +
Sbjct: 180 CRRCRQYGHVSEGCTA----CQNCGKTGHEV 206
>UniRef50_Q21M26 Cluster: Glycogen synthase-like protein; n=1;
Saccharophagus degradans 2-40|Rep: Glycogen
synthase-like protein - Saccharophagus degradans (strain
2-40 / ATCC 43961 / DSM 17024)
Length = 516
Score = 34.3 bits (75), Expect = 1.7
Identities = 20/77 (25%), Positives = 31/77 (40%)
Frame = -3
Query: 244 RIGQINLGGAEDATRELPSIARDLGLDIVLVQEQYSMVGFLAQCGAHPKAGVYIRNRVLP 65
R +GG D R+LP + + G D+++ Y + L Q A V V
Sbjct: 15 RFAGAKVGGVGDVIRDLPPVLNEAGCDVMVAMPSYGFLARLPQLEAVATLKVMFGGIVKS 74
Query: 64 CAVLHHLSSTHITVVHI 14
+L + S H V+I
Sbjct: 75 VELLRLVDSAHPEQVYI 91
>UniRef50_A5NU64 Cluster: LigA precursor; n=1; Methylobacterium sp.
4-46|Rep: LigA precursor - Methylobacterium sp. 4-46
Length = 883
Score = 34.3 bits (75), Expect = 1.7
Identities = 23/54 (42%), Positives = 25/54 (46%)
Frame = +2
Query: 254 PNIHTRPDLGSAPPHAGAPDSRARPSGA*PRDGIAGRSHSTRRLPYRPPFGGHP 415
P H RP AP H P S ARP P RS TR +P+ PPF G P
Sbjct: 110 PARHRRP-APRAPRHQRRPPSPARPLTDRPP-----RSCQTRMIPHAPPFPGRP 157
>UniRef50_A3WVH4 Cluster: Outer membrane autotransporter barrel
protein; n=4; Bradyrhizobiaceae|Rep: Outer membrane
autotransporter barrel protein - Nitrobacter sp. Nb-311A
Length = 654
Score = 34.3 bits (75), Expect = 1.7
Identities = 19/64 (29%), Positives = 29/64 (45%), Gaps = 2/64 (3%)
Frame = -1
Query: 399 GGL*GSLRVLCDLPAIPSRGYAPDGLARLSGAPACGGALPKSGRVWI--LGPDFVLAKSI 226
G G+ R++ + P RGY + + P CG K+ W LG +F L +S
Sbjct: 539 GAAFGNTRIVTNCNTGPDRGYIDYSIPAVIAQPGCGANSSKTAAGWTVGLGTEFALTRS- 597
Query: 225 WVVQ 214
W V+
Sbjct: 598 WTVR 601
>UniRef50_Q867Z5 Cluster: Gag protein; n=1; Drosophila virilis|Rep:
Gag protein - Drosophila virilis (Fruit fly)
Length = 1037
Score = 34.3 bits (75), Expect = 1.7
Identities = 11/26 (42%), Positives = 18/26 (69%)
Frame = -2
Query: 491 CNKCQQYGHPEKFCRAKEATCGRCGE 414
C++CQ +GH + +CR + C +CGE
Sbjct: 627 CHRCQSFGHSKNYCR-RPFACLKCGE 651
>UniRef50_Q4W7T7 Cluster: VASA RNA helicase; n=3; Daphniidae|Rep:
VASA RNA helicase - Moina macrocopa
Length = 843
Score = 34.3 bits (75), Expect = 1.7
Identities = 18/37 (48%), Positives = 19/37 (51%), Gaps = 4/37 (10%)
Frame = -2
Query: 503 RVTCCNKCQQYGHPEKFCR----AKEATCGRCGEDGH 405
R TC N CQQ GH K C + C CGEDGH
Sbjct: 253 RGTCYN-CQQEGHMSKDCPNPKVERSRGCRNCGEDGH 288
>UniRef50_Q179G6 Cluster: Putative uncharacterized protein; n=3;
Aedes aegypti|Rep: Putative uncharacterized protein -
Aedes aegypti (Yellowfever mosquito)
Length = 324
Score = 34.3 bits (75), Expect = 1.7
Identities = 12/29 (41%), Positives = 17/29 (58%)
Frame = -2
Query: 503 RVTCCNKCQQYGHPEKFCRAKEATCGRCG 417
++ C KC + GH K+C K CG+CG
Sbjct: 189 KIMLCRKCGRLGHTSKYCTLK-PRCGQCG 216
>UniRef50_Q5EBM5 Cluster: PB1 protein; n=32; Euteleostomi|Rep: PB1
protein - Homo sapiens (Human)
Length = 425
Score = 34.3 bits (75), Expect = 1.7
Identities = 23/63 (36%), Positives = 31/63 (49%)
Frame = -1
Query: 438 GHLWPMWRGWPPNGGL*GSLRVLCDLPAIPSRGYAPDGLARLSGAPACGGALPKSGRVWI 259
G + P+ G PP L + LP IP G G+A + G PA GG+ P +V +
Sbjct: 244 GSMQPLHPGGPPPHHLPPGVP---GLPGIPPPGVMNQGVAPMVGTPAPGGS-PYGQQVGV 299
Query: 258 LGP 250
LGP
Sbjct: 300 LGP 302
>UniRef50_A1CXG6 Cluster: Putative uncharacterized protein; n=4;
Trichocomaceae|Rep: Putative uncharacterized protein -
Neosartorya fischeri (strain ATCC 1020 / DSM 3700 / NRRL
181)(Aspergillus fischerianus (strain ATCC 1020 / DSM
3700 / NRRL 181))
Length = 855
Score = 34.3 bits (75), Expect = 1.7
Identities = 21/60 (35%), Positives = 22/60 (36%)
Frame = +2
Query: 284 SAPPHAGAPDSRARPSGA*PRDGIAGRSHSTRRLPYRPPFGGHPLHIGHRWPPWPGKISP 463
SA P G P P R SH+ R PY P P H PP P K SP
Sbjct: 214 SASPQPGYPQGSQHPPPHPARTPTHPPSHNAPRPPYTPQSAQRPPASQHAQPPQPPKPSP 273
>UniRef50_Q86U86 Cluster: Protein polybromo-1; n=50; Euteleostomi|Rep:
Protein polybromo-1 - Homo sapiens (Human)
Length = 1689
Score = 34.3 bits (75), Expect = 1.7
Identities = 23/63 (36%), Positives = 31/63 (49%)
Frame = -1
Query: 438 GHLWPMWRGWPPNGGL*GSLRVLCDLPAIPSRGYAPDGLARLSGAPACGGALPKSGRVWI 259
G + P+ G PP L + LP IP G G+A + G PA GG+ P +V +
Sbjct: 1508 GSMQPLHPGGPPPHHLPPGVP---GLPGIPPPGVMNQGVAPMVGTPAPGGS-PYGQQVGV 1563
Query: 258 LGP 250
LGP
Sbjct: 1564 LGP 1566
>UniRef50_UPI00015B4390 Cluster: PREDICTED: similar to putative
retroelement pol polyprotein, partial; n=1; Nasonia
vitripennis|Rep: PREDICTED: similar to putative
retroelement pol polyprotein, partial - Nasonia
vitripennis
Length = 1331
Score = 33.9 bits (74), Expect = 2.2
Identities = 12/29 (41%), Positives = 15/29 (51%)
Frame = -2
Query: 491 CNKCQQYGHPEKFCRAKEATCGRCGEDGH 405
CN+C + GH + C K C C E GH
Sbjct: 392 CNRCGEKGHMKNDCTHKTVKCFNCNEFGH 420
>UniRef50_UPI0000D578AA Cluster: PREDICTED: similar to
Nucleic-acid-binding protein from mobile element jockey
(ORF1); n=1; Tribolium castaneum|Rep: PREDICTED: similar
to Nucleic-acid-binding protein from mobile element
jockey (ORF1) - Tribolium castaneum
Length = 347
Score = 33.9 bits (74), Expect = 2.2
Identities = 12/27 (44%), Positives = 18/27 (66%)
Frame = -2
Query: 491 CNKCQQYGHPEKFCRAKEATCGRCGED 411
C++CQ YGH + C+A + C +C ED
Sbjct: 196 CHRCQMYGHSQPGCKA-DFKCLKCAED 221
>UniRef50_UPI00015A3CBD Cluster: Zinc finger CCHC domain-containing
protein 3.; n=5; Danio rerio|Rep: Zinc finger CCHC
domain-containing protein 3. - Danio rerio
Length = 436
Score = 33.9 bits (74), Expect = 2.2
Identities = 14/32 (43%), Positives = 18/32 (56%)
Frame = -2
Query: 491 CNKCQQYGHPEKFCRAKEATCGRCGEDGHRME 396
C KC + GH + C+ E CG+C E GH E
Sbjct: 184 CRKCGKCGHLAEACQ--ELVCGKCREIGHSFE 213
>UniRef50_Q4RUZ2 Cluster: Chromosome 12 SCAF14993, whole genome
shotgun sequence; n=1; Tetraodon nigroviridis|Rep:
Chromosome 12 SCAF14993, whole genome shotgun sequence -
Tetraodon nigroviridis (Green puffer)
Length = 373
Score = 33.9 bits (74), Expect = 2.2
Identities = 21/74 (28%), Positives = 32/74 (43%), Gaps = 3/74 (4%)
Frame = +2
Query: 251 GPNIHTRPDLGSAPPHAGAPDSRARPSGA*PRDGIAGR-SHSTRRLPYRPPFGGHPLHIG 427
G ++ RP + + H +RP + P D + S S ++P PP P G
Sbjct: 87 GAHVPARPQVSISKQHVSGSHHSSRPQVSGPHDSAGPQVSASWPQVPVLPP--NQPQVPG 144
Query: 428 HRWP--PWPGKISP 463
H++P PWP P
Sbjct: 145 HQFPAHPWPQVFKP 158
>UniRef50_Q82GP8 Cluster: Putative uncharacterized protein; n=2;
Streptomyces|Rep: Putative uncharacterized protein -
Streptomyces avermitilis
Length = 559
Score = 33.9 bits (74), Expect = 2.2
Identities = 25/65 (38%), Positives = 32/65 (49%), Gaps = 3/65 (4%)
Frame = +2
Query: 230 DLANTKSGPNIHTRPDLGSAPPHAGAPDSRARPSGA*P--RDGIAGRSHSTRRLP-YRPP 400
D T+ P + PD GS GAPD R P+ R AG S ST++LP ++PP
Sbjct: 264 DAQATQYLPPVPAEPDAGSYGIRPGAPDERQPPAEFDNLFRSDSAGAS-STQQLPQFQPP 322
Query: 401 FGGHP 415
G P
Sbjct: 323 AAGAP 327
>UniRef50_Q5YQ82 Cluster: Putative uncharacterized protein; n=1;
Nocardia farcinica|Rep: Putative uncharacterized protein
- Nocardia farcinica
Length = 642
Score = 33.9 bits (74), Expect = 2.2
Identities = 23/68 (33%), Positives = 25/68 (36%)
Frame = +2
Query: 284 SAPPHAGAPDSRARPSGA*PRDGIAGRSHSTRRLPYRPPFGGHPLHIGHRWPPWPGKISP 463
+AP AP P A P D R + P RPP HPLH G P P S
Sbjct: 479 TAPGATDAPSGAPMPVPAHPTDASDARRQNATTPP-RPPAADHPLHTGVLTFPPPADQSR 537
Query: 464 GDHIADTY 487
D Y
Sbjct: 538 ADRRLPDY 545
>UniRef50_Q28SA4 Cluster: Putative uncharacterized protein; n=1;
Jannaschia sp. CCS1|Rep: Putative uncharacterized
protein - Jannaschia sp. (strain CCS1)
Length = 405
Score = 33.9 bits (74), Expect = 2.2
Identities = 23/79 (29%), Positives = 38/79 (48%), Gaps = 1/79 (1%)
Frame = +3
Query: 198 SLVASSAPPRLIWPIRSRGLISI-LDLI*EALLRMPARRTVARGRRVHSLATESPAGRTA 374
+L+A APP + W ++ RGL+++ L + + R PA R +A T PA +
Sbjct: 212 ALLADIAPPAIPWEVQLRGLLTLALSDVPKISYRRPASRWIAAVAEARIAGTLEPAFQPG 271
Query: 375 RGGCLTGLHSVAILSTSAT 431
R + V L TS++
Sbjct: 272 RARSGSRPRVVVGLDTSSS 290
>UniRef50_Q12B87 Cluster: Secretion protein HlyD precursor; n=3;
Comamonadaceae|Rep: Secretion protein HlyD precursor -
Polaromonas sp. (strain JS666 / ATCC BAA-500)
Length = 467
Score = 33.9 bits (74), Expect = 2.2
Identities = 18/44 (40%), Positives = 24/44 (54%)
Frame = +2
Query: 227 IDLANTKSGPNIHTRPDLGSAPPHAGAPDSRARPSGA*PRDGIA 358
+D+ANT+S RP G+A A AP + + S A PR G A
Sbjct: 376 VDMANTRSARPAAERPATGAASAAAAAPAAASAASSAAPRPGRA 419
>UniRef50_O05478 Cluster: LipA transcriptional activator; n=1;
Streptomyces sp.|Rep: LipA transcriptional activator -
Streptomyces sp
Length = 934
Score = 33.9 bits (74), Expect = 2.2
Identities = 37/136 (27%), Positives = 53/136 (38%), Gaps = 1/136 (0%)
Frame = +3
Query: 30 ICVLLRWCRTAQGSTLLRIYTPALGCAPHWARNPTMEYCSCTRTISRPRSRAME-GSSLV 206
+C +L RTA+G LLR G A +P + C + R A+ G
Sbjct: 512 MCAVLAG-RTAEGHALLRRCLDPDGSAEG---HPVLRRCPDPAGLLRAGVAALVLGEVAA 567
Query: 207 ASSAPPRLIWPIRSRGLISILDLI*EALLRMPARRTVARGRRVHSLATESPAGRTARGGC 386
A R + +R+RG +L E L R + R H+L A RT +
Sbjct: 568 ACRIGARALGAVRTRGPEVLLPQALEYLAYAELRAGLHAAARAHALEGLHAARRTGQPNS 627
Query: 387 LTGLHSVAILSTSATG 434
LH+V L+ S G
Sbjct: 628 SARLHAVLALAASVEG 643
>UniRef50_A2Q5K8 Cluster: Zinc finger, CCHC-type; n=1; Medicago
truncatula|Rep: Zinc finger, CCHC-type - Medicago
truncatula (Barrel medic)
Length = 121
Score = 33.9 bits (74), Expect = 2.2
Identities = 11/18 (61%), Positives = 14/18 (77%)
Frame = -2
Query: 491 CNKCQQYGHPEKFCRAKE 438
CN C ++GH EKFCR K+
Sbjct: 91 CNHCNRWGHREKFCRLKQ 108
>UniRef50_Q93138 Cluster: ORF1; n=1; Bombyx mori|Rep: ORF1 - Bombyx
mori (Silk moth)
Length = 460
Score = 33.9 bits (74), Expect = 2.2
Identities = 21/80 (26%), Positives = 27/80 (33%), Gaps = 4/80 (5%)
Frame = -2
Query: 491 CNKCQQYGHPEKFCRAKEATCGRCGEDGHRMEXXXXXXXXXXXXXXXXXXAMHPTA---- 324
C C +GH KFC+ +C CG R + M TA
Sbjct: 379 CTLCLGFGHSRKFCKEALPSCSHCGGPHMRADCPDRLTGIEPTCCNCRKANMTTTAHNAF 438
Query: 323 SRDCPARRHAEERFLNQVEY 264
SR+CP + VEY
Sbjct: 439 SRECPVMAKWDNIARRAVEY 458
>UniRef50_Q7PP02 Cluster: ENSANGP00000017688; n=1; Anopheles gambiae
str. PEST|Rep: ENSANGP00000017688 - Anopheles gambiae
str. PEST
Length = 328
Score = 33.9 bits (74), Expect = 2.2
Identities = 15/32 (46%), Positives = 17/32 (53%), Gaps = 2/32 (6%)
Frame = -2
Query: 491 CNKCQQYGHPEKFCR--AKEATCGRCGEDGHR 402
C+ C + GH CR K TC CGE GHR
Sbjct: 119 CSNCGERGHVRFKCRNAPKLVTCYMCGEQGHR 150
>UniRef50_P91776 Cluster: Pacifastin light chain precursor; n=1;
Pacifastacus leniusculus|Rep: Pacifastin light chain
precursor - Pacifastacus leniusculus (Signal crayfish)
Length = 420
Score = 33.9 bits (74), Expect = 2.2
Identities = 17/38 (44%), Positives = 19/38 (50%), Gaps = 2/38 (5%)
Frame = -2
Query: 254 APTSYWPNQSGWCRGCDEGATLHCT--GSRPGYCSCTG 147
AP S W N+ WC D G L CT G PGY + G
Sbjct: 36 APGSRWKNECNWCSCADHGLAL-CTLMGCFPGYKAAQG 72
>UniRef50_Q2H1R0 Cluster: Putative uncharacterized protein; n=5;
Chaetomium globosum|Rep: Putative uncharacterized
protein - Chaetomium globosum (Soil fungus)
Length = 1554
Score = 33.9 bits (74), Expect = 2.2
Identities = 13/29 (44%), Positives = 17/29 (58%)
Frame = -2
Query: 491 CNKCQQYGHPEKFCRAKEATCGRCGEDGH 405
C C Q+GH C+ ++ CGRCG D H
Sbjct: 347 CFACYQFGHFAATCKNRKI-CGRCGNDRH 374
>UniRef50_UPI0000D5776C Cluster: PREDICTED: similar to
Nucleic-acid-binding protein from mobile element jockey
(ORF1); n=1; Tribolium castaneum|Rep: PREDICTED: similar
to Nucleic-acid-binding protein from mobile element
jockey (ORF1) - Tribolium castaneum
Length = 214
Score = 33.5 bits (73), Expect = 2.9
Identities = 14/33 (42%), Positives = 20/33 (60%)
Frame = -2
Query: 503 RVTCCNKCQQYGHPEKFCRAKEATCGRCGEDGH 405
R+T C++CQ++GH CR K C +C GH
Sbjct: 95 RITQCHRCQEWGHATSNCRVK-LKCLKCA-GGH 125
>UniRef50_UPI000049964B Cluster: zinc finger protein; n=1; Entamoeba
histolytica HM-1:IMSS|Rep: zinc finger protein -
Entamoeba histolytica HM-1:IMSS
Length = 389
Score = 33.5 bits (73), Expect = 2.9
Identities = 13/31 (41%), Positives = 16/31 (51%)
Frame = -2
Query: 494 CCNKCQQYGHPEKFCRAKEATCGRCGEDGHR 402
CC C + GH K C E C CG+ GH+
Sbjct: 292 CCFICGETGHISKDCPNAERKCFVCGKTGHK 322
>UniRef50_UPI000023F0FC Cluster: hypothetical protein FG10143.1;
n=1; Gibberella zeae PH-1|Rep: hypothetical protein
FG10143.1 - Gibberella zeae PH-1
Length = 434
Score = 33.5 bits (73), Expect = 2.9
Identities = 14/39 (35%), Positives = 21/39 (53%), Gaps = 8/39 (20%)
Frame = -2
Query: 491 CNKCQQYGHPEKFCRAK--------EATCGRCGEDGHRM 399
C+ C++ GH KFC + + +C CG DGHR+
Sbjct: 244 CSNCRELGHISKFCTQEKMERTDGPKISCYNCGADGHRV 282
Score = 33.1 bits (72), Expect = 3.9
Identities = 13/30 (43%), Positives = 16/30 (53%), Gaps = 1/30 (3%)
Frame = -2
Query: 491 CNKCQQYGHPEKFC-RAKEATCGRCGEDGH 405
C C++ GH K C A C CGE+GH
Sbjct: 74 CRYCKKEGHMRKDCPEAPPMVCENCGEEGH 103
Score = 32.7 bits (71), Expect = 5.1
Identities = 21/80 (26%), Positives = 32/80 (40%), Gaps = 2/80 (2%)
Frame = -2
Query: 491 CNKCQQYGHPEKFC-RAKEATCGRCGEDGHRMEXXXXXXXXXXXXXXXXXXAMHPTASRD 315
C KC + GH K C + C CG++GH + H S++
Sbjct: 319 CRKCSEVGHFAKDCPQGGGRACRNCGQEGHMAKECDQPRDMSTVTCRNCEQQGH--YSKE 376
Query: 314 CPARRH-AEERFLNQVEYGY 258
CP R ++ + N EYG+
Sbjct: 377 CPLPRDWSKVQCSNCQEYGH 396
>UniRef50_Q76IL0 Cluster: Gag-like protein; n=14; Danio rerio|Rep:
Gag-like protein - Danio rerio (Zebrafish) (Brachydanio
rerio)
Length = 436
Score = 33.5 bits (73), Expect = 2.9
Identities = 14/32 (43%), Positives = 18/32 (56%)
Frame = -2
Query: 491 CNKCQQYGHPEKFCRAKEATCGRCGEDGHRME 396
C KC + GH + C+ E CG+C E GH E
Sbjct: 184 CRKCGKNGHLAEACQ--ELICGKCREVGHSFE 213
>UniRef50_Q2Z0B2 Cluster: TRAP-type C4-dicarboxylate transport
system,large permease component; n=2;
Betaproteobacteria|Rep: TRAP-type C4-dicarboxylate
transport system,large permease component - uncultured
beta proteobacterium
Length = 484
Score = 33.5 bits (73), Expect = 2.9
Identities = 28/92 (30%), Positives = 35/92 (38%), Gaps = 3/92 (3%)
Frame = +2
Query: 236 ANTKSGPNIHTRPDLGSAPPHAGAPD-SRARPSGA*PRDGIAGRSHSTRRLPYR--PPFG 406
A+ ++GP+ R G+ AG PD +RP+G DG R L P F
Sbjct: 272 ADRRAGPDAPARVGTGAGHQSAGIPDVDESRPAGGGMHDGHFFRHRDRHALAVAAGPAFR 331
Query: 407 GHPLHIGHRWPPWPGKISPGDHIADTYCSRSP 502
P GHR G P D SR P
Sbjct: 332 HPPGASGHRHSRQSGNRIPHAAGGDQSLSRQP 363
>UniRef50_A7B9Z4 Cluster: Putative uncharacterized protein; n=1;
Actinomyces odontolyticus ATCC 17982|Rep: Putative
uncharacterized protein - Actinomyces odontolyticus ATCC
17982
Length = 130
Score = 33.5 bits (73), Expect = 2.9
Identities = 16/40 (40%), Positives = 21/40 (52%), Gaps = 4/40 (10%)
Frame = -1
Query: 360 PAIPSRGYAPDGLARLSGA----PACGGALPKSGRVWILG 253
P + S Y P G+A G P G A PK+GR W++G
Sbjct: 29 PTVSSAPYNPSGVAPQLGTAGMGPQAGDAAPKTGRGWVIG 68
>UniRef50_Q5ZB52 Cluster: Zinc knuckle containing protein-like; n=1;
Oryza sativa (japonica cultivar-group)|Rep: Zinc knuckle
containing protein-like - Oryza sativa subsp. japonica
(Rice)
Length = 247
Score = 33.5 bits (73), Expect = 2.9
Identities = 24/69 (34%), Positives = 29/69 (42%), Gaps = 4/69 (5%)
Frame = +2
Query: 269 RPDLGSAPPHAGAPDSRARPSG--A*PRDGIAGRSHSTRRLPYRPPFGGHPLHIGHRW-- 436
RP PP +G+P S R S G A S ++ P+RPP G P R
Sbjct: 49 RPLSPPLPPSSGSPPSSPRTSSRFGIASIGFAASSSTSSAPPFRPPTAGAPPSPSTRTAP 108
Query: 437 PPWPGKISP 463
PP P SP
Sbjct: 109 PPSPASASP 117
>UniRef50_Q4DXU4 Cluster: Putative uncharacterized protein; n=2;
Trypanosoma cruzi|Rep: Putative uncharacterized protein
- Trypanosoma cruzi
Length = 328
Score = 33.5 bits (73), Expect = 2.9
Identities = 22/81 (27%), Positives = 34/81 (41%), Gaps = 10/81 (12%)
Frame = +2
Query: 275 DLGSAPPHAGAPDSRARPSGA*PRDGIAGRS--------HSTRRLP--YRPPFGGHPLHI 424
++G PP + P G+ +G++G H T +P Y P F G
Sbjct: 217 EMGPRPPGFRYGEGDLVPGGSLSPEGVSGGGMKLDPKAFHGTGAIPCRYDPMFPGDVPRG 276
Query: 425 GHRWPPWPGKISPGDHIADTY 487
G W P PG++ PG+ D +
Sbjct: 277 GGMWGPGPGRVFPGEPDPDNF 297
>UniRef50_Q171K9 Cluster: Toll; n=5; Diptera|Rep: Toll - Aedes
aegypti (Yellowfever mosquito)
Length = 1258
Score = 33.5 bits (73), Expect = 2.9
Identities = 11/32 (34%), Positives = 19/32 (59%)
Frame = -2
Query: 491 CNKCQQYGHPEKFCRAKEATCGRCGEDGHRME 396
CN C ++GH E+ C++ + CG+C +E
Sbjct: 20 CNNCHRFGHKEESCKSNK-RCGKCSRIHEEVE 50
>UniRef50_A1IIT5 Cluster: RNA helicase; n=1; Neobenedenia
girellae|Rep: RNA helicase - Neobenedenia girellae
Length = 634
Score = 33.5 bits (73), Expect = 2.9
Identities = 15/32 (46%), Positives = 17/32 (53%)
Frame = -2
Query: 491 CNKCQQYGHPEKFCRAKEATCGRCGEDGHRME 396
CN CQ+ GH K C K C CGE GH +
Sbjct: 33 CNFCQETGHLAKECPKK--PCRNCGELGHHRD 62
Score = 33.5 bits (73), Expect = 2.9
Identities = 14/30 (46%), Positives = 16/30 (53%)
Frame = -2
Query: 491 CNKCQQYGHPEKFCRAKEATCGRCGEDGHR 402
C +C + GH K C A C CGE GHR
Sbjct: 108 CRECNEEGHQAKDC--PNAKCRNCGELGHR 135
>UniRef50_Q7S2W3 Cluster: Predicted protein; n=1; Neurospora
crassa|Rep: Predicted protein - Neurospora crassa
Length = 1444
Score = 33.5 bits (73), Expect = 2.9
Identities = 17/48 (35%), Positives = 21/48 (43%)
Frame = +2
Query: 254 PNIHTRPDLGSAPPHAGAPDSRARPSGA*PRDGIAGRSHSTRRLPYRP 397
P P GS PP P S + PSG P G + S+ R+L P
Sbjct: 963 PGQSMMPTAGSPPPGRSRPGSSSAPSGPPPSSGASAASNKYRKLEPAP 1010
>UniRef50_Q01374 Cluster: Gag-like protein; n=3; Neurospora
crassa|Rep: Gag-like protein - Neurospora crassa
Length = 486
Score = 33.5 bits (73), Expect = 2.9
Identities = 13/29 (44%), Positives = 17/29 (58%)
Frame = -2
Query: 491 CNKCQQYGHPEKFCRAKEATCGRCGEDGH 405
C +C GH +FCR ++ C RCGE H
Sbjct: 350 CFRCWGIGHTARFCR-QDDICARCGEAKH 377
>UniRef50_Q9IDV9 Cluster: Gag-Pol polyprotein (Pr160Gag-Pol)
[Contains: Matrix protein p17 (MA); Capsid protein p24
(CA); Spacer peptide p2; Nucleocapsid protein p7 (NC);
Transframe peptide (TF); p6-pol (p6*); Protease (EC
3.4.23.16) (Retropepsin) (PR); Reverse
transcriptase/ribonuclease H (EC 2.7.7.49) (EC 2.7.7.7)
(EC 3.1.26.4) (p66 RT); p51 RT; p15; Integrase (IN)];
n=97846; Retroviridae|Rep: Gag-Pol polyprotein
(Pr160Gag-Pol) [Contains: Matrix protein p17 (MA);
Capsid protein p24 (CA); Spacer peptide p2; Nucleocapsid
protein p7 (NC); Transframe peptide (TF); p6-pol (p6*);
Protease (EC 3.4.23.16) (Retropepsin) (PR); Reverse
transcriptase/ribonuclease H (EC 2.7.7.49) (EC 2.7.7.7)
(EC 3.1.26.4) (p66 RT); p51 RT; p15; Integrase (IN)] -
Human immunodeficiency virus type 1 (isolate YBF106
group N) (HIV-1)
Length = 1449
Score = 33.5 bits (73), Expect = 2.9
Identities = 12/33 (36%), Positives = 21/33 (63%), Gaps = 1/33 (3%)
Frame = -2
Query: 491 CNKCQQYGHPEKFCRA-KEATCGRCGEDGHRME 396
C C + GH + C+A + C +CG++GH+M+
Sbjct: 394 CFNCGKEGHLARNCKAPRRRGCWKCGQEGHQMK 426
>UniRef50_UPI0000F2B495 Cluster: PREDICTED: hypothetical protein;
n=1; Monodelphis domestica|Rep: PREDICTED: hypothetical
protein - Monodelphis domestica
Length = 353
Score = 33.1 bits (72), Expect = 3.9
Identities = 12/29 (41%), Positives = 16/29 (55%)
Frame = -2
Query: 491 CNKCQQYGHPEKFCRAKEATCGRCGEDGH 405
C +C + GH FC+ K C CG+ GH
Sbjct: 309 CFRCGEQGHSTTFCK-KGIVCNLCGQKGH 336
>UniRef50_UPI0000EBCA9E Cluster: PREDICTED: hypothetical protein;
n=1; Bos taurus|Rep: PREDICTED: hypothetical protein -
Bos taurus
Length = 567
Score = 33.1 bits (72), Expect = 3.9
Identities = 20/54 (37%), Positives = 27/54 (50%), Gaps = 1/54 (1%)
Frame = +3
Query: 291 LRMPARRTVARGRRVHSLATESPAGRTARGGCLTGLHSVAILST-SATGGLLGP 449
L P+RR R+ HS+ TE P R RG + G H + S+ + GL GP
Sbjct: 30 LGFPSRRWEGAARKPHSMVTECPL-REPRGAGICGKHGNCVPSSRPSLEGLTGP 82
>UniRef50_UPI0000DA2EC0 Cluster: PREDICTED: hypothetical protein;
n=1; Rattus norvegicus|Rep: PREDICTED: hypothetical
protein - Rattus norvegicus
Length = 161
Score = 33.1 bits (72), Expect = 3.9
Identities = 27/62 (43%), Positives = 32/62 (51%), Gaps = 8/62 (12%)
Frame = +2
Query: 287 APPHAGAPDSRARPSGA*PRD-GIAGR----SHSTR---RLPYRPPFGGHPLHIGHRWPP 442
A P AG DS A +G PR G AG+ + STR +LP RPP PL + R PP
Sbjct: 71 AAPLAGRGDSGAHLAGGAPRRLGPAGKPAPCAESTRAGLQLPGRPPPPSPPLAVPARSPP 130
Query: 443 WP 448
P
Sbjct: 131 GP 132
>UniRef50_UPI0000ECB478 Cluster: PREDICTED: Gallus gallus
hypothetical LOC429068 (LOC429068), mRNA.; n=1; Gallus
gallus|Rep: PREDICTED: Gallus gallus hypothetical
LOC429068 (LOC429068), mRNA. - Gallus gallus
Length = 192
Score = 33.1 bits (72), Expect = 3.9
Identities = 22/53 (41%), Positives = 26/53 (49%), Gaps = 6/53 (11%)
Frame = +2
Query: 269 RPDLGSAPPHAGAPDSRARPSGA*PR----DGIAG--RSHSTRRLPYRPPFGG 409
RP + PP GA S A P+ PR G AG RS + R P+RPP G
Sbjct: 13 RPAGAATPPPLGAASSAASPAAPSPRRSASGGTAGAQRSAAPRGAPHRPPRNG 65
>UniRef50_Q699V2 Cluster: Gag polyprotein; n=8; Simian
immunodeficiency virus|Rep: Gag polyprotein - Simian
immunodeficiency virus (isolate CPZ GAB1) (SIV-cpz)
(Chimpanzeeimmunodeficiency virus)
Length = 561
Score = 33.1 bits (72), Expect = 3.9
Identities = 15/32 (46%), Positives = 17/32 (53%), Gaps = 1/32 (3%)
Frame = -2
Query: 497 TCCNKCQQYGHPEKFC-RAKEATCGRCGEDGH 405
T C C Q GH +K C R K+ C CG GH
Sbjct: 413 TRCFNCGQLGHLQKDCPRPKKLKCFNCGGTGH 444
>UniRef50_Q5XGJ9 Cluster: LOC495203 protein; n=23; Xenopus|Rep:
LOC495203 protein - Xenopus laevis (African clawed frog)
Length = 362
Score = 33.1 bits (72), Expect = 3.9
Identities = 13/31 (41%), Positives = 16/31 (51%)
Frame = -2
Query: 497 TCCNKCQQYGHPEKFCRAKEATCGRCGEDGH 405
T C +C+ YGH + C C CGE GH
Sbjct: 177 TFCRRCRSYGHDAEKCE----LCQSCGESGH 203
>UniRef50_Q05WY2 Cluster: Putative uncharacterized protein; n=1;
Synechococcus sp. RS9916|Rep: Putative uncharacterized
protein - Synechococcus sp. RS9916
Length = 108
Score = 33.1 bits (72), Expect = 3.9
Identities = 25/71 (35%), Positives = 32/71 (45%), Gaps = 3/71 (4%)
Frame = +3
Query: 18 CTTVICVLLRWCRTAQGSTLL--RIYTPALGCAPH-WARNPTMEYCSCTRTISRPRSRAM 188
C ++ + R Q T+L + PAL A W NP C I R R A
Sbjct: 9 CRGLVLASMTAERVDQALTVLLKAVVNPALAQATEPWQTNPRERIVQC---IERVRIEAS 65
Query: 189 EGSSLVASSAP 221
EG+SLVA+ AP
Sbjct: 66 EGASLVAACAP 76
>UniRef50_Q2L3T3 Cluster: POZ domain protein; n=1; Triticum
aestivum|Rep: POZ domain protein - Triticum aestivum
(Wheat)
Length = 275
Score = 33.1 bits (72), Expect = 3.9
Identities = 15/36 (41%), Positives = 19/36 (52%)
Frame = +2
Query: 218 TTQIDLANTKSGPNIHTRPDLGSAPPHAGAPDSRAR 325
T ++D +NT +G R S P GAPD RAR
Sbjct: 227 TPKLDASNTAAGKRGRRRKSTSSQDPDGGAPDKRAR 262
>UniRef50_Q8MY38 Cluster: Gag-like protein; n=7; Papilio xuthus|Rep:
Gag-like protein - Papilio xuthus
Length = 698
Score = 33.1 bits (72), Expect = 3.9
Identities = 14/35 (40%), Positives = 19/35 (54%), Gaps = 3/35 (8%)
Frame = -2
Query: 491 CNKCQQYGHPEKFCRAKE---ATCGRCGEDGHRME 396
C +C Q GH C A+E C RCG +GH+ +
Sbjct: 591 CYRCLQKGHVRAQCNAEEDRSKLCFRCGVEGHKFK 625
>UniRef50_Q7R2D9 Cluster: GLP_623_71940_70969; n=1; Giardia lamblia
ATCC 50803|Rep: GLP_623_71940_70969 - Giardia lamblia
ATCC 50803
Length = 323
Score = 33.1 bits (72), Expect = 3.9
Identities = 13/42 (30%), Positives = 22/42 (52%), Gaps = 3/42 (7%)
Frame = -2
Query: 512 DFVRVTCCNKCQQYGHPEKFCRAKE---ATCGRCGEDGHRME 396
D+ C +C Q GH CR+++ C CG+D H+++
Sbjct: 62 DYDETIWCRECGQIGHLAHMCRSRKRIIGVCFCCGDDRHQVD 103
>UniRef50_Q586R7 Cluster: RNA-binding protein, putative; n=5;
Trypanosoma|Rep: RNA-binding protein, putative -
Trypanosoma brucei
Length = 441
Score = 33.1 bits (72), Expect = 3.9
Identities = 14/29 (48%), Positives = 15/29 (51%)
Frame = -2
Query: 491 CNKCQQYGHPEKFCRAKEATCGRCGEDGH 405
C KC + GH CR E TC CG GH
Sbjct: 279 CFKCNKEGHVATQCRG-EPTCRTCGRPGH 306
>UniRef50_A7SJG4 Cluster: Predicted protein; n=1; Nematostella
vectensis|Rep: Predicted protein - Nematostella
vectensis
Length = 136
Score = 33.1 bits (72), Expect = 3.9
Identities = 14/34 (41%), Positives = 19/34 (55%), Gaps = 5/34 (14%)
Frame = -2
Query: 491 CNKCQQYGH-----PEKFCRAKEATCGRCGEDGH 405
C+KC Q GH P + + + TC +CGE GH
Sbjct: 93 CHKCGQEGHFSRECPNQAIQGQSDTCHKCGETGH 126
>UniRef50_P62633 Cluster: Cellular nucleic acid-binding protein;
n=57; Euteleostomi|Rep: Cellular nucleic acid-binding
protein - Homo sapiens (Human)
Length = 177
Score = 33.1 bits (72), Expect = 3.9
Identities = 12/29 (41%), Positives = 15/29 (51%)
Frame = -2
Query: 491 CNKCQQYGHPEKFCRAKEATCGRCGEDGH 405
C +C + GH K C +E C CG GH
Sbjct: 54 CYRCGESGHLAKDCDLQEDACYNCGRGGH 82
Score = 32.7 bits (71), Expect = 5.1
Identities = 13/30 (43%), Positives = 16/30 (53%), Gaps = 1/30 (3%)
Frame = -2
Query: 491 CNKCQQYGHPEKFC-RAKEATCGRCGEDGH 405
C +C + GH C + E C RCGE GH
Sbjct: 137 CYRCGETGHVAINCSKTSEVNCYRCGESGH 166
>UniRef50_UPI00015B4DBC Cluster: PREDICTED: similar to polyprotein;
n=1; Nasonia vitripennis|Rep: PREDICTED: similar to
polyprotein - Nasonia vitripennis
Length = 655
Score = 32.7 bits (71), Expect = 5.1
Identities = 13/29 (44%), Positives = 16/29 (55%)
Frame = -2
Query: 491 CNKCQQYGHPEKFCRAKEATCGRCGEDGH 405
C+KC HP K C A + CG+C GH
Sbjct: 257 CSKCGT-NHPYKQCPAYDKICGKCSMKGH 284
>UniRef50_UPI0000F1FB24 Cluster: PREDICTED: similar to novel
transposon; n=4; Danio rerio|Rep: PREDICTED: similar to
novel transposon - Danio rerio
Length = 1299
Score = 32.7 bits (71), Expect = 5.1
Identities = 11/29 (37%), Positives = 15/29 (51%)
Frame = -2
Query: 491 CNKCQQYGHPEKFCRAKEATCGRCGEDGH 405
C +C H + C K+A C CG+ GH
Sbjct: 197 CYRCHGKNHSAQVCHFKDARCHNCGKIGH 225
>UniRef50_UPI0000E4A1A5 Cluster: PREDICTED: similar to Sec23
interacting protein; n=2; Strongylocentrotus
purpuratus|Rep: PREDICTED: similar to Sec23 interacting
protein - Strongylocentrotus purpuratus
Length = 926
Score = 32.7 bits (71), Expect = 5.1
Identities = 33/86 (38%), Positives = 39/86 (45%), Gaps = 1/86 (1%)
Frame = +2
Query: 248 SGPNIHTRPDLGSAPPHAGAPDSRARPSG-A*PRDGIAGRSHSTRRLPYRPPFGGHPLHI 424
+GP T SAPP GAP PSG A P+ GI G H R +PY P GG
Sbjct: 147 AGPPPPTTGYSPSAPPPTGAP-----PSGQAAPKFGIKGYQH--RPMPY--PTGGVTPAS 197
Query: 425 GHRWPPWPGKISPGDHIADTYCSRSP 502
G P PG ++P + SR P
Sbjct: 198 G---PLPPGILAPPPKVQQYDASRPP 220
>UniRef50_UPI0000D57973 Cluster: PREDICTED: hypothetical protein,
partial; n=1; Tribolium castaneum|Rep: PREDICTED:
hypothetical protein, partial - Tribolium castaneum
Length = 163
Score = 32.7 bits (71), Expect = 5.1
Identities = 13/32 (40%), Positives = 18/32 (56%)
Frame = -2
Query: 491 CNKCQQYGHPEKFCRAKEATCGRCGEDGHRME 396
C KC ++GH K C+ E C C + GHR +
Sbjct: 104 CLKCGRWGHHAKACQ-NEPHCYECEQQGHRAD 134
>UniRef50_Q9Q5K9 Cluster: NTR; n=1; Cercopithecine herpesvirus
12|Rep: NTR - Cercopithecine herpesvirus 12 (CeHV-12)
(Baboon herpesvirus)
Length = 608
Score = 32.7 bits (71), Expect = 5.1
Identities = 31/89 (34%), Positives = 33/89 (37%), Gaps = 9/89 (10%)
Frame = +2
Query: 263 HTRPDLGSAP--PHAGAPDSRARPSGA*PRD----GIAGRSHSTRRLPYRP--PFGGHPL 418
H P G P P G P + P PR G A R H RP P GGHP
Sbjct: 515 HPPPGAGQRPSGPTGGHPAAPGAPGPRSPRTERRRGSAQRGHPPPGAGQRPSGPTGGHPA 574
Query: 419 HIGHRWPPWPGKIS-PGDHIADTYCSRSP 502
G PP P + S P D A T P
Sbjct: 575 APGAPGPPNPERGSGPADPPAATRLPLEP 603
>UniRef50_Q21BF0 Cluster: Putative uncharacterized protein; n=1;
Rhodopseudomonas palustris BisB18|Rep: Putative
uncharacterized protein - Rhodopseudomonas palustris
(strain BisB18)
Length = 222
Score = 32.7 bits (71), Expect = 5.1
Identities = 25/81 (30%), Positives = 33/81 (40%)
Frame = +2
Query: 272 PDLGSAPPHAGAPDSRARPSGA*PRDGIAGRSHSTRRLPYRPPFGGHPLHIGHRWPPWPG 451
PD PP A APD+ P G P + + +ST +P PP P PP P
Sbjct: 74 PDSAPVPPPAAAPDAAGTPPG--PPERMPPPPNST--VPPAPPVAA-PSRAAPS-PPAPS 127
Query: 452 KISPGDHIADTYCSRSPGQSP 514
+P +A S G +P
Sbjct: 128 PAAPSPSVAAPAAPASSGLTP 148
>UniRef50_A7HGS4 Cluster: Peptidase M23B; n=1; Anaeromyxobacter sp.
Fw109-5|Rep: Peptidase M23B - Anaeromyxobacter sp.
Fw109-5
Length = 332
Score = 32.7 bits (71), Expect = 5.1
Identities = 15/37 (40%), Positives = 20/37 (54%)
Frame = +3
Query: 156 RTISRPRSRAMEGSSLVASSAPPRLIWPIRSRGLISI 266
R SR + G L A +APPRL WP+ G+ S+
Sbjct: 169 RLASRIATARALGLGLFARTAPPRLRWPVEQAGISSV 205
>UniRef50_A4KIV4 Cluster: Conserved integral membrane protein; n=17;
Mycobacterium|Rep: Conserved integral membrane protein -
Mycobacterium tuberculosis str. Haarlem
Length = 427
Score = 32.7 bits (71), Expect = 5.1
Identities = 15/46 (32%), Positives = 24/46 (52%)
Frame = -1
Query: 267 VWILGPDFVLAKSIWVVQRMRRGSYPPLHGISAWILFLYRNNIPWS 130
+W+ G VLA +IW ++R+ R P L I + L + + WS
Sbjct: 283 LWVAGSLLVLAATIWAMRRVLRAGEPTLAVICVALFGLVVSPVSWS 328
>UniRef50_Q8LK28 Cluster: Putative DNA/RNA binding protein; n=1;
Brassica napus|Rep: Putative DNA/RNA binding protein -
Brassica napus (Rape)
Length = 306
Score = 32.7 bits (71), Expect = 5.1
Identities = 11/32 (34%), Positives = 16/32 (50%)
Frame = -2
Query: 491 CNKCQQYGHPEKFCRAKEATCGRCGEDGHRME 396
C+ C++ GH K C TC C H++E
Sbjct: 112 CDHCKEVGHSIKNCLTAPITCSLCKSTAHKLE 143
>UniRef50_A4RXZ9 Cluster: Predicted protein; n=2; Ostreococcus|Rep:
Predicted protein - Ostreococcus lucimarinus CCE9901
Length = 1060
Score = 32.7 bits (71), Expect = 5.1
Identities = 12/30 (40%), Positives = 16/30 (53%)
Frame = -2
Query: 491 CNKCQQYGHPEKFCRAKEATCGRCGEDGHR 402
C +C + GH + C E TC C + GHR
Sbjct: 993 CRRCGELGHFARDCSFDEDTCKICQQHGHR 1022
>UniRef50_A2I5E5 Cluster: Retrotransposon protein; n=1; Beta
vulgaris|Rep: Retrotransposon protein - Beta vulgaris
(Sugar beet)
Length = 1501
Score = 32.7 bits (71), Expect = 5.1
Identities = 14/34 (41%), Positives = 18/34 (52%)
Frame = -2
Query: 503 RVTCCNKCQQYGHPEKFCRAKEATCGRCGEDGHR 402
RV C C + HP K C+ + TC C + GHR
Sbjct: 253 RVHICKFCDK-NHPGKDCKGELVTCHYCQKKGHR 285
>UniRef50_Q8MY21 Cluster: Gag-like protein; n=2; Forficula
scudderi|Rep: Gag-like protein - Forficula scudderi
Length = 148
Score = 32.7 bits (71), Expect = 5.1
Identities = 14/30 (46%), Positives = 17/30 (56%)
Frame = -2
Query: 491 CNKCQQYGHPEKFCRAKEATCGRCGEDGHR 402
C KC Q GH K CR C +CG +GH+
Sbjct: 91 CLKCCQAGHVAKECR-NTPMCYKCGVEGHQ 119
>UniRef50_Q22BL5 Cluster: Insect antifreeze protein; n=1; Tetrahymena
thermophila SB210|Rep: Insect antifreeze protein -
Tetrahymena thermophila SB210
Length = 3751
Score = 32.7 bits (71), Expect = 5.1
Identities = 15/31 (48%), Positives = 15/31 (48%)
Frame = -2
Query: 236 PNQSGWCRGCDEGATLHCTGSRPGYCSCTGT 144
PNQ G C CD CTG P CS GT
Sbjct: 3035 PNQGGQCTPCDPTCKT-CTGPGPNNCSSCGT 3064
>UniRef50_Q16NU8 Cluster: Putative uncharacterized protein; n=2;
Aedes aegypti|Rep: Putative uncharacterized protein -
Aedes aegypti (Yellowfever mosquito)
Length = 167
Score = 32.7 bits (71), Expect = 5.1
Identities = 13/34 (38%), Positives = 17/34 (50%)
Frame = -2
Query: 506 VRVTCCNKCQQYGHPEKFCRAKEATCGRCGEDGH 405
+ V C+ C Q H CR +E C C E+GH
Sbjct: 106 LEVQQCDACGQSDHTMAVCRYRERLCFYCREEGH 139
>UniRef50_A7S951 Cluster: Predicted protein; n=1; Nematostella
vectensis|Rep: Predicted protein - Nematostella
vectensis
Length = 658
Score = 32.7 bits (71), Expect = 5.1
Identities = 22/56 (39%), Positives = 25/56 (44%), Gaps = 2/56 (3%)
Frame = +2
Query: 254 PNIHTRPDLGSAPPHAGAPDSRARPSGA*PRDGIAGRSHSTRRLPY--RPPFGGHP 415
P + TRP L + PP A P RP A R +A R R P RPP HP
Sbjct: 559 PPLATRPPLATRPPLATRPPLATRPPLA-TRPPLATRPPLATRPPLATRPPLATHP 613
>UniRef50_A4H7S6 Cluster: Hypthetical protein, conserved; n=1;
Leishmania braziliensis|Rep: Hypthetical protein,
conserved - Leishmania braziliensis
Length = 1021
Score = 32.7 bits (71), Expect = 5.1
Identities = 18/39 (46%), Positives = 21/39 (53%)
Frame = +3
Query: 132 TMEYCSCTRTISRPRSRAMEGSSLVASSAPPRLIWPIRS 248
T + T T S P SR G+S ASSAPP P+RS
Sbjct: 83 TNDLAQATNTASSPTSRMQLGTSPRASSAPPGSPSPVRS 121
>UniRef50_Q6C9D6 Cluster: Yarrowia lipolytica chromosome D of strain
CLIB122 of Yarrowia lipolytica; n=1; Yarrowia
lipolytica|Rep: Yarrowia lipolytica chromosome D of
strain CLIB122 of Yarrowia lipolytica - Yarrowia
lipolytica (Candida lipolytica)
Length = 197
Score = 32.7 bits (71), Expect = 5.1
Identities = 14/32 (43%), Positives = 17/32 (53%), Gaps = 1/32 (3%)
Frame = -2
Query: 497 TCCNKCQQYGHPEKFC-RAKEATCGRCGEDGH 405
TC N C ++GH + C R C CG DGH
Sbjct: 14 TCFN-CGEFGHQVRACPRVGNPVCYNCGNDGH 44
>UniRef50_Q8TF72 Cluster: Protein Shroom3; n=8; Eutheria|Rep:
Protein Shroom3 - Homo sapiens (Human)
Length = 1995
Score = 32.7 bits (71), Expect = 5.1
Identities = 30/89 (33%), Positives = 35/89 (39%), Gaps = 4/89 (4%)
Frame = +2
Query: 239 NTKS-GPNIHTRPDLGSAPPHAGAPDSRARPSGA*PRDGIAGRSHSTRRLPYRPPFGGHP 415
NTK+ P PDLGS H S RP G R G + +ST P PP HP
Sbjct: 697 NTKAEDPGRKAAPDLGS---HLDRQVSYPRPEG---RTGASASFNSTDPSPEEPPAPSHP 750
Query: 416 --LHIGHRWP-PWPGKISPGDHIADTYCS 493
+G R P P G +CS
Sbjct: 751 HTSSLGRRGPGPGSASALQGFQYGKPHCS 779
>UniRef50_Q9NBX5 Cluster: Nucleic-acid-binding protein from
transposon X-element; n=2; Drosophila melanogaster|Rep:
Nucleic-acid-binding protein from transposon X-element -
Drosophila melanogaster (Fruit fly)
Length = 501
Score = 32.7 bits (71), Expect = 5.1
Identities = 12/24 (50%), Positives = 16/24 (66%)
Frame = -2
Query: 491 CNKCQQYGHPEKFCRAKEATCGRC 420
C++CQQ GH K+CR K C +C
Sbjct: 287 CHRCQQIGHTAKYCR-KAHICVKC 309
>UniRef50_P21330 Cluster: Nucleic-acid-binding protein from mobile
element jockey; n=2; Drosophila|Rep:
Nucleic-acid-binding protein from mobile element jockey
- Drosophila melanogaster (Fruit fly)
Length = 568
Score = 32.7 bits (71), Expect = 5.1
Identities = 10/24 (41%), Positives = 17/24 (70%)
Frame = -2
Query: 491 CNKCQQYGHPEKFCRAKEATCGRC 420
C +CQ +GH + +C A++ CG+C
Sbjct: 390 CQRCQIFGHSKNYC-AQDPICGKC 412
>UniRef50_A0PI26 Cluster: ASABF-like antimicrobial protein; n=1;
Hippocampus kuda|Rep: ASABF-like antimicrobial protein -
Hippocampus kuda (Spotted seahorse)
Length = 78
Score = 32.3 bits (70), Expect = 6.8
Identities = 12/34 (35%), Positives = 14/34 (41%)
Frame = -2
Query: 509 FVRVTCCNKCQQYGHPEKFCRAKEATCGRCGEDG 408
F R+ C CQ +CR C RCG G
Sbjct: 24 FGRIACIGSCQVQNCGTGYCRGDTCVCSRCGTGG 57
>UniRef50_Q8YDQ0 Cluster: ALDEHYDE DEHYDROGENASE; n=1; Brucella
melitensis|Rep: ALDEHYDE DEHYDROGENASE - Brucella
melitensis
Length = 340
Score = 32.3 bits (70), Expect = 6.8
Identities = 26/95 (27%), Positives = 38/95 (40%), Gaps = 5/95 (5%)
Frame = +1
Query: 64 RGAPYCGYTHPPWGVLHI-----GLGTRPWNIVPVQEQYPGRDPVQWRVAPSSHPLHHPD 228
R A C P GVL++ L R W +P+ +P PV W S+ P
Sbjct: 198 RLAELCAEAGLPEGVLNVVTAPGPLPARRWGCIPISTFWPSPAPVSWAANCSNIPPARTS 257
Query: 229 *FGQYEVGA*YPYST*FRKRSSACRRAGQSREAVG 333
+ + A +P S SS C R+G ++ G
Sbjct: 258 SVSIWNLAANHPTS------SSRCARSGAGGKSFG 286
>UniRef50_Q2JGX9 Cluster: Peptidase S1 and S6, chymotrypsin/Hap;
n=3; Frankia|Rep: Peptidase S1 and S6, chymotrypsin/Hap
- Frankia sp. (strain CcI3)
Length = 579
Score = 32.3 bits (70), Expect = 6.8
Identities = 23/63 (36%), Positives = 25/63 (39%), Gaps = 1/63 (1%)
Frame = +2
Query: 281 GSAPPHAGAPDSRARPSGA*PRDGIAGRSHSTRRLPYRPPFGGHPLHIGHRW-PPWPGKI 457
GS PP A PSG P A R+ + P PP G P GH W PPW
Sbjct: 124 GSPPPAAPPGGPWGPPSGPPPSGPAAPRALNGAAGPAGPPAG--PPTGGHSWGPPWSSPS 181
Query: 458 SPG 466
G
Sbjct: 182 GAG 184
>UniRef50_Q2J552 Cluster: Peptide deformylase; n=2; Frankia|Rep:
Peptide deformylase - Frankia sp. (strain CcI3)
Length = 549
Score = 32.3 bits (70), Expect = 6.8
Identities = 16/50 (32%), Positives = 24/50 (48%)
Frame = -1
Query: 297 CGGALPKSGRVWILGPDFVLAKSIWVVQRMRRGSYPPLHGISAWILFLYR 148
CGG W + D+ K +W++ RG +P G SAWI + Y+
Sbjct: 223 CGG----EQMAWQVKTDWDALKEVWLLFENSRGRFPLYPGESAWINYSYQ 268
>UniRef50_Q3VZ34 Cluster: Putative uncharacterized protein; n=1;
Frankia sp. EAN1pec|Rep: Putative uncharacterized
protein - Frankia sp. EAN1pec
Length = 163
Score = 32.3 bits (70), Expect = 6.8
Identities = 20/52 (38%), Positives = 22/52 (42%)
Frame = +2
Query: 359 GRSHSTRRLPYRPPFGGHPLHIGHRWPPWPGKISPGDHIADTYCSRSPGQSP 514
GR+H R +RPP G R PP PGK P S SPG P
Sbjct: 76 GRAHLDDRGQHRPPLQQG----GRRSPPGPGKTDPPRRPRPAMSSPSPGWEP 123
>UniRef50_A4FPN6 Cluster: PE-PGRS family protein; n=1;
Saccharopolyspora erythraea NRRL 2338|Rep: PE-PGRS
family protein - Saccharopolyspora erythraea (strain
NRRL 23338)
Length = 1984
Score = 32.3 bits (70), Expect = 6.8
Identities = 31/84 (36%), Positives = 35/84 (41%), Gaps = 7/84 (8%)
Frame = +2
Query: 236 ANTKSGPNIHTRPDLGSAPPHAGAP--DSRARPS-----GA*PRDGIAGRSHSTRRLPYR 394
A T S + RPDLGS+ P AP D A P+ G P G AG + S P
Sbjct: 601 ATTASNVDAPARPDLGSSAPPPSAPRTDQPAGPASGSAMGGAPAGGPAGGAPSAGGAP-- 658
Query: 395 PPFGGHPLHIGHRWPPWPGKISPG 466
P G G W PG SPG
Sbjct: 659 PAGRGSRPGTGGGWTGTPG--SPG 680
>UniRef50_A3VHH8 Cluster: Putative uncharacterized protein; n=1;
Rhodobacterales bacterium HTCC2654|Rep: Putative
uncharacterized protein - Rhodobacterales bacterium
HTCC2654
Length = 166
Score = 32.3 bits (70), Expect = 6.8
Identities = 10/40 (25%), Positives = 21/40 (52%)
Frame = -1
Query: 276 SGRVWILGPDFVLAKSIWVVQRMRRGSYPPLHGISAWILF 157
SG +W+ S W+++ G + P+H +S +++F
Sbjct: 44 SGYIWVTNMLIAAFSSFWIMEIQLVGPFSPIHALSLYVIF 83
>UniRef50_A0L4C7 Cluster: Tetratricopeptide TPR_2 repeat protein;
n=1; Magnetococcus sp. MC-1|Rep: Tetratricopeptide TPR_2
repeat protein - Magnetococcus sp. (strain MC-1)
Length = 789
Score = 32.3 bits (70), Expect = 6.8
Identities = 18/52 (34%), Positives = 29/52 (55%)
Frame = -3
Query: 223 GGAEDATRELPSIARDLGLDIVLVQEQYSMVGFLAQCGAHPKAGVYIRNRVL 68
G ++AT +L +A+ L D+ L+ +VG L Q G H A Y+R R++
Sbjct: 158 GRIQEATEQLQQLAQMLPEDLDLLLH---LVGLLKQIGKHTAAEAYLRQRLV 206
>UniRef50_Q9LU44 Cluster: Similarity to transcription or splicing
factor; n=6; Magnoliophyta|Rep: Similarity to
transcription or splicing factor - Arabidopsis thaliana
(Mouse-ear cress)
Length = 804
Score = 32.3 bits (70), Expect = 6.8
Identities = 26/79 (32%), Positives = 33/79 (41%), Gaps = 2/79 (2%)
Frame = +2
Query: 245 KSGPNIHTRPDLGSAPPHAGAPDSRARPSGA*PRDGIAGRSHSTRRLPYRPPFGGHPLHI 424
KS P I PP G P S +P GA P A +ST +P+ PP + +
Sbjct: 558 KSPPPIAPPGPPAPQPPTQGYPPSN-QPPGAYPSQQYATGGYSTAPVPWGPPVPSYSPYA 616
Query: 425 GHRWPPWPGKISP--GDHI 475
PP PG P G H+
Sbjct: 617 --LPPPPPGSYHPVHGQHM 633
>UniRef50_Q2QLK1 Cluster: Retrotransposon protein, putative,
unclassified; n=1; Oryza sativa (japonica
cultivar-group)|Rep: Retrotransposon protein, putative,
unclassified - Oryza sativa subsp. japonica (Rice)
Length = 1198
Score = 32.3 bits (70), Expect = 6.8
Identities = 11/32 (34%), Positives = 18/32 (56%)
Frame = -2
Query: 491 CNKCQQYGHPEKFCRAKEATCGRCGEDGHRME 396
CNKC++ GH K+CR +E ++ + E
Sbjct: 229 CNKCKRKGHIAKYCRTREINRANFSQEKEKSE 260
>UniRef50_Q01LI0 Cluster: OSIGBa0134J07.9 protein; n=20;
Spermatophyta|Rep: OSIGBa0134J07.9 protein - Oryza
sativa (Rice)
Length = 1314
Score = 32.3 bits (70), Expect = 6.8
Identities = 11/32 (34%), Positives = 18/32 (56%)
Frame = -2
Query: 491 CNKCQQYGHPEKFCRAKEATCGRCGEDGHRME 396
CNKC++ GH K+CR +E ++ + E
Sbjct: 285 CNKCKRKGHIAKYCRTREINRANFSQEKEKSE 316
>UniRef50_Q6UJ38 Cluster: Gag protein; n=4; Drosophila virilis|Rep:
Gag protein - Drosophila virilis (Fruit fly)
Length = 907
Score = 32.3 bits (70), Expect = 6.8
Identities = 10/27 (37%), Positives = 18/27 (66%)
Frame = -2
Query: 491 CNKCQQYGHPEKFCRAKEATCGRCGED 411
C++CQ++ H ++CR A C +CG +
Sbjct: 569 CHRCQRFNHTARYCR-HPARCVKCGNE 594
>UniRef50_Q4Q1R3 Cluster: Universal minicircle sequence binding
protein; n=6; Leishmania|Rep: Universal minicircle
sequence binding protein - Leishmania major
Length = 175
Score = 32.3 bits (70), Expect = 6.8
Identities = 14/31 (45%), Positives = 16/31 (51%), Gaps = 2/31 (6%)
Frame = -2
Query: 491 CNKCQQYGHPEKFCRAKEAT--CGRCGEDGH 405
C KC + GH + C AT C CGE GH
Sbjct: 66 CYKCGEAGHMSRSCPRAAATRSCYNCGETGH 96
>UniRef50_Q4DSE8 Cluster: Putative uncharacterized protein; n=2;
Trypanosoma|Rep: Putative uncharacterized protein -
Trypanosoma cruzi
Length = 216
Score = 32.3 bits (70), Expect = 6.8
Identities = 12/25 (48%), Positives = 13/25 (52%)
Frame = -2
Query: 491 CNKCQQYGHPEKFCRAKEATCGRCG 417
C KC Q GHP C K+ C CG
Sbjct: 75 CWKCAQRGHPSAQCPVKKYRCADCG 99
>UniRef50_A7SP17 Cluster: Predicted protein; n=1; Nematostella
vectensis|Rep: Predicted protein - Nematostella
vectensis
Length = 92
Score = 32.3 bits (70), Expect = 6.8
Identities = 13/29 (44%), Positives = 14/29 (48%)
Frame = -2
Query: 491 CNKCQQYGHPEKFCRAKEATCGRCGEDGH 405
C C Q GHP C + C RCG GH
Sbjct: 19 CGYCHQVGHPISTCPVR-GRCFRCGAAGH 46
Score = 32.3 bits (70), Expect = 6.8
Identities = 13/29 (44%), Positives = 14/29 (48%)
Frame = -2
Query: 491 CNKCQQYGHPEKFCRAKEATCGRCGEDGH 405
C C Q GHP C + C RCG GH
Sbjct: 58 CGYCHQVGHPISTCPVR-GRCFRCGAAGH 85
>UniRef50_A7L494 Cluster: Putative zinc finger protein; n=1; Artemia
franciscana|Rep: Putative zinc finger protein - Artemia
sanfranciscana (Brine shrimp) (Artemia franciscana)
Length = 256
Score = 32.3 bits (70), Expect = 6.8
Identities = 13/32 (40%), Positives = 18/32 (56%), Gaps = 2/32 (6%)
Frame = -2
Query: 491 CNKCQQYGHPEKFC--RAKEATCGRCGEDGHR 402
C KC++ GH K C C +CG++GHR
Sbjct: 110 CLKCKETGHRIKDCPENPNRNKCWKCGKEGHR 141
>UniRef50_Q9C4A4 Cluster: Gag-like protein; n=3; Tricholoma
matsutake|Rep: Gag-like protein - Tricholoma matsutake
(Matsutake mushroom) (Tricholoma nauseosum)
Length = 275
Score = 32.3 bits (70), Expect = 6.8
Identities = 10/24 (41%), Positives = 15/24 (62%)
Frame = -2
Query: 491 CNKCQQYGHPEKFCRAKEATCGRC 420
C +C ++GHP CRA ++ C C
Sbjct: 157 CQRCWKWGHPTPACRAPQSKCPIC 180
>UniRef50_Q6C7Q8 Cluster: Similar to tr|Q95JC9 Sus scrofa Basic
proline-rich protein; n=1; Yarrowia lipolytica|Rep:
Similar to tr|Q95JC9 Sus scrofa Basic proline-rich
protein - Yarrowia lipolytica (Candida lipolytica)
Length = 659
Score = 32.3 bits (70), Expect = 6.8
Identities = 23/60 (38%), Positives = 25/60 (41%)
Frame = +2
Query: 281 GSAPPHAGAPDSRARPSGA*PRDGIAGRSHSTRRLPYRPPFGGHPLHIGHRWPPWPGKIS 460
G APP AP A P + RS S PP GG P G PP PGK+S
Sbjct: 205 GFAPPPPPAPPGGAPAIPGAPSVASSYRSASASSGAPPPPPGGAPPIPGGAPPPLPGKVS 264
>UniRef50_P18041 Cluster: Gag polyprotein (Pr55Gag) [Contains:
Matrix protein p17 (MA); Capsid protein p24 (CA); Spacer
peptide p2; Nucleocapsid protein p7 (NC); Spacer peptide
p1; p6-gag]; n=100; Primate lentivirus group|Rep: Gag
polyprotein (Pr55Gag) [Contains: Matrix protein p17
(MA); Capsid protein p24 (CA); Spacer peptide p2;
Nucleocapsid protein p7 (NC); Spacer peptide p1; p6-gag]
- Human immunodeficiency virus type 2 (isolate Ghana-1
subtype A)(HIV-2)
Length = 522
Score = 32.3 bits (70), Expect = 6.8
Identities = 14/36 (38%), Positives = 20/36 (55%), Gaps = 1/36 (2%)
Frame = -2
Query: 503 RVTCCNKCQQYGHPEKFCRA-KEATCGRCGEDGHRM 399
+V C C + GH + CRA + C +CG+ GH M
Sbjct: 388 KVIRCWNCGKEGHSARQCRAPRRQGCWKCGKTGHVM 423
>UniRef50_UPI00015B4869 Cluster: PREDICTED: similar to polyprotein;
n=1; Nasonia vitripennis|Rep: PREDICTED: similar to
polyprotein - Nasonia vitripennis
Length = 1074
Score = 31.9 bits (69), Expect = 8.9
Identities = 11/29 (37%), Positives = 15/29 (51%)
Frame = -2
Query: 491 CNKCQQYGHPEKFCRAKEATCGRCGEDGH 405
C++C + GH + C K C C E GH
Sbjct: 65 CDRCGEKGHMKNDCTHKTVKCFNCNEFGH 93
>UniRef50_UPI0000EBE03A Cluster: PREDICTED: hypothetical protein;
n=1; Bos taurus|Rep: PREDICTED: hypothetical protein -
Bos taurus
Length = 363
Score = 31.9 bits (69), Expect = 8.9
Identities = 25/65 (38%), Positives = 28/65 (43%), Gaps = 3/65 (4%)
Frame = +2
Query: 266 TRPDLGSAPPHAGAPDSRARPSGA*PR-DGIAGRSHSTRRLPYRPPFGGHPLHIGHRW-- 436
+R S PPH G RA P+GA PR G AG + R P R H W
Sbjct: 154 SRQTPASDPPHPGDGRGRA-PAGAGPRPPGAAGVGRAGARAPARCARSAWWCHPSPGWST 212
Query: 437 PPWPG 451
PP PG
Sbjct: 213 PPAPG 217
>UniRef50_UPI0000E484DF Cluster: PREDICTED: hypothetical protein;
n=1; Strongylocentrotus purpuratus|Rep: PREDICTED:
hypothetical protein - Strongylocentrotus purpuratus
Length = 307
Score = 31.9 bits (69), Expect = 8.9
Identities = 27/96 (28%), Positives = 35/96 (36%), Gaps = 1/96 (1%)
Frame = +2
Query: 146 FLYKNNIQAEIPCNGG*LPRRILCTTQIDLANTKSGPNIHTRPDLGSAPPHAGAPDSRAR 325
F Y QA+ L +R+ L ++ +G T P G+ PP +G P S
Sbjct: 20 FAYDKTSQAQTTPRKNLLNQRVAMPQNYPLPSSMTGQPHSTSPPAGNLPPPSGPPSSTGP 79
Query: 326 PSGA*PRDGIAGRSHSTRRLPYR-PPFGGHPLHIGH 430
P P G ST P PP G I H
Sbjct: 80 PPSTGPPPS-TGPPPSTGPPPSTGPPPSGPTRAIQH 114
>UniRef50_UPI00006CE5F7 Cluster: ABC transporter family protein; n=1;
Tetrahymena thermophila SB210|Rep: ABC transporter family
protein - Tetrahymena thermophila SB210
Length = 1412
Score = 31.9 bits (69), Expect = 8.9
Identities = 22/62 (35%), Positives = 32/62 (51%), Gaps = 3/62 (4%)
Frame = -1
Query: 327 GLARLSGAPACGGALPKSGRVWILGP--DFVLAKSI-WVVQRMRRGSYPPLHGISAWILF 157
GLA ++ CG S + + P F ++ SI W+V ++ RGSYP L +I F
Sbjct: 907 GLALITFCYVCGFLFKNSNQAFKSFPIITFFVSYSIPWIVLQITRGSYPKLFSFFQYI-F 965
Query: 156 LY 151
LY
Sbjct: 966 LY 967
>UniRef50_UPI00005A49CD Cluster: PREDICTED: hypothetical protein
XP_863081; n=1; Canis lupus familiaris|Rep: PREDICTED:
hypothetical protein XP_863081 - Canis familiaris
Length = 339
Score = 31.9 bits (69), Expect = 8.9
Identities = 27/71 (38%), Positives = 29/71 (40%), Gaps = 1/71 (1%)
Frame = +2
Query: 263 HTRPDLGSAPPHAGAPDSRARPSGA*PRDGIAGRSHSTRRLPYRPPFGGHPL-HIGHRWP 439
HT G PP + P S ARP P D G T P+ PP H L H P
Sbjct: 237 HTLGPEGRGPPRSQLPPSAARPRVRHPGDP-CGLGCITVGAPHHPP--AHTLRHAAEEAP 293
Query: 440 PWPGKISPGDH 472
P PG PG H
Sbjct: 294 P-PG---PGHH 300
>UniRef50_UPI0000F34884 Cluster: UPI0000F34884 related cluster; n=1;
Bos taurus|Rep: UPI0000F34884 UniRef100 entry - Bos
Taurus
Length = 630
Score = 31.9 bits (69), Expect = 8.9
Identities = 23/67 (34%), Positives = 30/67 (44%), Gaps = 3/67 (4%)
Frame = +2
Query: 293 PHAG--APDSRARPSGA*PRDGIAGRSHSTRRLPYRP-PFGGHPLHIGHRWPPWPGKISP 463
PH G +P + + P D G H+ P+RP P+ P W P PG SP
Sbjct: 117 PHPGDQSPGNHSPGDQPHPGDPSPG-DHTLGTTPWRPEPWRPQP------WGPHPGDHSP 169
Query: 464 GDHIADT 484
GDH +T
Sbjct: 170 GDHTLET 176
Score = 31.9 bits (69), Expect = 8.9
Identities = 23/67 (34%), Positives = 30/67 (44%), Gaps = 3/67 (4%)
Frame = +2
Query: 293 PHAG--APDSRARPSGA*PRDGIAGRSHSTRRLPYRP-PFGGHPLHIGHRWPPWPGKISP 463
PH G +P + + P D G H+ P+RP P+ P W P PG SP
Sbjct: 330 PHPGDQSPGNHSPGDQPHPGDPSPG-DHTLGTTPWRPEPWRPQP------WGPHPGDHSP 382
Query: 464 GDHIADT 484
GDH +T
Sbjct: 383 GDHTLET 389
>UniRef50_UPI0000F31397 Cluster: UPI0000F31397 related cluster; n=1;
Bos taurus|Rep: UPI0000F31397 UniRef100 entry - Bos
Taurus
Length = 940
Score = 31.9 bits (69), Expect = 8.9
Identities = 17/43 (39%), Positives = 22/43 (51%)
Frame = +2
Query: 272 PDLGSAPPHAGAPDSRARPSGA*PRDGIAGRSHSTRRLPYRPP 400
P +AP HA + R SGA PR + G +T + P RPP
Sbjct: 167 PGTDAAPAHAASASPTPRRSGAAPRSRVRGAGAATPQHP-RPP 208
>UniRef50_Q9DUC5 Cluster: ORF2; n=1; Torque teno virus|Rep: ORF2 -
Torque teno virus
Length = 136
Score = 31.9 bits (69), Expect = 8.9
Identities = 25/72 (34%), Positives = 29/72 (40%)
Frame = +2
Query: 254 PNIHTRPDLGSAPPHAGAPDSRARPSGA*PRDGIAGRSHSTRRLPYRPPFGGHPLHIGHR 433
P H L SA H G P +P A G+ G RR P +P GH+
Sbjct: 36 PGFHLGLLLHSAGRHLGGPGG-PQPPPAPGGPGVGGEG--PRRFLPLPGLPANPEEPGHQ 92
Query: 434 WPPWPGKISPGD 469
PP PG PGD
Sbjct: 93 RPPCPG--GPGD 102
>UniRef50_Q8PMB4 Cluster: Putative uncharacterized protein XAC1518;
n=1; Xanthomonas axonopodis pv. citri|Rep: Putative
uncharacterized protein XAC1518 - Xanthomonas axonopodis
pv. citri
Length = 103
Score = 31.9 bits (69), Expect = 8.9
Identities = 19/56 (33%), Positives = 24/56 (42%), Gaps = 8/56 (14%)
Frame = +1
Query: 82 GYTHPPWGVL----HIGLGTRPWNIVPVQEQYPGR-DPV---QWRVAPSSHPLHHP 225
G+ HPP+G G G RP+ + P P R P +WR AP H P
Sbjct: 13 GFPHPPFGTFPRGRGEGAGGRPFAVQPTDRAQPDRASPAGGRRWRAAPDEGQSHAP 68
>UniRef50_Q82CS6 Cluster: Putative uncharacterized protein; n=1;
Streptomyces avermitilis|Rep: Putative uncharacterized
protein - Streptomyces avermitilis
Length = 145
Score = 31.9 bits (69), Expect = 8.9
Identities = 16/36 (44%), Positives = 19/36 (52%)
Frame = +2
Query: 242 TKSGPNIHTRPDLGSAPPHAGAPDSRARPSGA*PRD 349
+++ P T PD P GAP S ARPS A P D
Sbjct: 4 SRTSPTSRTSPDDLRRTPAQGAPPSPARPSAAPPSD 39
>UniRef50_Q4UPK4 Cluster: Putative uncharacterized protein; n=5;
Bacteria|Rep: Putative uncharacterized protein -
Xanthomonas campestris pv. campestris (strain 8004)
Length = 154
Score = 31.9 bits (69), Expect = 8.9
Identities = 21/60 (35%), Positives = 25/60 (41%), Gaps = 1/60 (1%)
Frame = -1
Query: 429 WPMWRGWPPNGGL*GSLRVLCD-LPAIPSRGYAPDGLARLSGAPACGGALPKSGRVWILG 253
W WR P L ++ D LP PSR L RL CGGA+ W+LG
Sbjct: 43 WLGWRYTPWVVSLLALGELITDQLPNTPSRKVPVQFLTRLLSGALCGGAIGLQAGQWMLG 102
>UniRef50_A7HBV2 Cluster: Dehydrogenase complex catalytic domain;
n=2; Anaeromyxobacter|Rep: Dehydrogenase complex
catalytic domain - Anaeromyxobacter sp. Fw109-5
Length = 454
Score = 31.9 bits (69), Expect = 8.9
Identities = 17/34 (50%), Positives = 21/34 (61%)
Frame = +2
Query: 221 TQIDLANTKSGPNIHTRPDLGSAPPHAGAPDSRA 322
T+ DLA + G N H RP+L +AP AP SRA
Sbjct: 171 TKDDLAAYRRGTNGHGRPELRAAPAGELAPASRA 204
>UniRef50_A7CTG6 Cluster: TatD-related deoxyribonuclease; n=1;
Opitutaceae bacterium TAV2|Rep: TatD-related
deoxyribonuclease - Opitutaceae bacterium TAV2
Length = 280
Score = 31.9 bits (69), Expect = 8.9
Identities = 13/24 (54%), Positives = 16/24 (66%), Gaps = 1/24 (4%)
Frame = +2
Query: 377 RRLPY-RPPFGGHPLHIGHRWPPW 445
RR P+ RP +G HP H G+R P W
Sbjct: 51 RRYPWVRPSYGLHPWHAGNRSPDW 74
>UniRef50_A1TQ54 Cluster: ATP dependent DNA ligase; n=1; Acidovorax
avenae subsp. citrulli AAC00-1|Rep: ATP dependent DNA
ligase - Acidovorax avenae subsp. citrulli (strain
AAC00-1)
Length = 939
Score = 31.9 bits (69), Expect = 8.9
Identities = 18/31 (58%), Positives = 19/31 (61%), Gaps = 3/31 (9%)
Frame = +3
Query: 300 PARRTVARGRRVHSL---ATESPAGRTARGG 383
PARRT ARG+ S A E AGRTAR G
Sbjct: 228 PARRTAARGKAAASAPAPAPEPAAGRTARAG 258
>UniRef50_A0NQ34 Cluster: Putative uncharacterized protein; n=1;
Stappia aggregata IAM 12614|Rep: Putative
uncharacterized protein - Stappia aggregata IAM 12614
Length = 533
Score = 31.9 bits (69), Expect = 8.9
Identities = 17/44 (38%), Positives = 20/44 (45%)
Frame = -2
Query: 179 GSRPGYCSCTGTIFHGRVPSPMWSTPQGGCVYPQ*GAPLRGSAP 48
G R Y +G+ +P TP GG PQ GAP G AP
Sbjct: 75 GGRDPYAPTPAGYEYGQQQAPDLRTPPGGYQTPQGGAPQPGGAP 118
>UniRef50_Q9S9R4 Cluster: F28J9.15 protein; n=1; Arabidopsis
thaliana|Rep: F28J9.15 protein - Arabidopsis thaliana
(Mouse-ear cress)
Length = 199
Score = 31.9 bits (69), Expect = 8.9
Identities = 11/29 (37%), Positives = 15/29 (51%)
Frame = -2
Query: 491 CNKCQQYGHPEKFCRAKEATCGRCGEDGH 405
C C+Q GH C ++ C RC + GH
Sbjct: 157 CYNCRQNGHTWSNCPGRDNNCKRCEKPGH 185
>UniRef50_Q69F89 Cluster: Gag-pol polyprotein; n=1; Phaseolus
vulgaris|Rep: Gag-pol polyprotein - Phaseolus vulgaris
(Kidney bean) (French bean)
Length = 529
Score = 31.9 bits (69), Expect = 8.9
Identities = 12/30 (40%), Positives = 16/30 (53%), Gaps = 1/30 (3%)
Frame = -2
Query: 491 CNKCQQYGHPEKFC-RAKEATCGRCGEDGH 405
C C + GHP C R +A C +C + GH
Sbjct: 191 CKHCNKLGHPPFKCWRRPDAKCNKCNQLGH 220
>UniRef50_Q53PL2 Cluster: Hydroxyproline-rich glycoprotein
DZ-HRGP-related; n=5; Oryza sativa|Rep:
Hydroxyproline-rich glycoprotein DZ-HRGP-related - Oryza
sativa subsp. japonica (Rice)
Length = 316
Score = 31.9 bits (69), Expect = 8.9
Identities = 22/70 (31%), Positives = 30/70 (42%), Gaps = 10/70 (14%)
Frame = +2
Query: 269 RPDLG--SAPPHAGAPDSRARPSGA*PRDG----IAGRSHSTRRLPYRPPFGGHPL---- 418
+P+L + PP + PD+ P A P G A + P PPF P
Sbjct: 135 QPELSPPAPPPESYTPDAPPAPEAASPHHGGGENPAWPRPGNNQWPPLPPFNQPPTPEWP 194
Query: 419 HIGHRWPPWP 448
H G++WPP P
Sbjct: 195 HPGNKWPPLP 204
>UniRef50_A3A731 Cluster: Putative uncharacterized protein; n=2;
Oryza sativa (japonica cultivar-group)|Rep: Putative
uncharacterized protein - Oryza sativa subsp. japonica
(Rice)
Length = 690
Score = 31.9 bits (69), Expect = 8.9
Identities = 18/50 (36%), Positives = 24/50 (48%)
Frame = +3
Query: 318 ARGRRVHSLATESPAGRTARGGCLTGLHSVAILSTSATGGLLGPAKFLRV 467
AR H SP G RGG TG+ S L+++ TG + + LRV
Sbjct: 40 AREASKHGTGAPSPGGGKGRGG--TGMRSAQELASACTGAAVEEVELLRV 87
>UniRef50_Q9BLI5 Cluster: TRAS3 protein; n=7; Bombycoidea|Rep: TRAS3
protein - Bombyx mori (Silk moth)
Length = 1682
Score = 31.9 bits (69), Expect = 8.9
Identities = 10/25 (40%), Positives = 13/25 (52%)
Frame = -2
Query: 491 CNKCQQYGHPEKFCRAKEATCGRCG 417
C +C YGH ++FC C CG
Sbjct: 374 CTRCLGYGHSKRFCVESVDLCSHCG 398
>UniRef50_Q8MY24 Cluster: Gag-like protein; n=2; Forficula
scudderi|Rep: Gag-like protein - Forficula scudderi
Length = 191
Score = 31.9 bits (69), Expect = 8.9
Identities = 13/31 (41%), Positives = 17/31 (54%)
Frame = -2
Query: 494 CCNKCQQYGHPEKFCRAKEATCGRCGEDGHR 402
C +C Q GH K CR C +CG +GH+
Sbjct: 67 CYKRCCQAGHVAKECR-NTPMCYKCGVEGHQ 96
>UniRef50_Q6J4U8 Cluster: Gag protein; n=8; Drosophila
melanogaster|Rep: Gag protein - Drosophila melanogaster
(Fruit fly)
Length = 1047
Score = 31.9 bits (69), Expect = 8.9
Identities = 11/28 (39%), Positives = 18/28 (64%)
Frame = -2
Query: 497 TCCNKCQQYGHPEKFCRAKEATCGRCGE 414
T C++CQ +GH + +CR C +CG+
Sbjct: 793 TQCHRCQCFGHTKNYCR-NPFKCMKCGQ 819
>UniRef50_O76962 Cluster: Putative chimeric R1/R2 retrotransposon;
n=1; Nasonia vitripennis|Rep: Putative chimeric R1/R2
retrotransposon - Nasonia vitripennis (Parasitic wasp)
Length = 488
Score = 31.9 bits (69), Expect = 8.9
Identities = 12/32 (37%), Positives = 18/32 (56%)
Frame = -2
Query: 506 VRVTCCNKCQQYGHPEKFCRAKEATCGRCGED 411
+R C KCQ +GH C A +A C +C ++
Sbjct: 403 IRPNQCYKCQAFGHHAARC-ASDAVCAKCAQN 433
>UniRef50_A3EXK5 Cluster: Fibroblast growth factor receptor b; n=1;
Nematostella vectensis|Rep: Fibroblast growth factor
receptor b - Nematostella vectensis
Length = 591
Score = 31.9 bits (69), Expect = 8.9
Identities = 14/37 (37%), Positives = 22/37 (59%)
Frame = +2
Query: 11 PNVHYRYMCAAKVVQNRAGEHPIADIHTRLGVCSTLG 121
PN+ YR A K++ A EH +AD+ + + V T+G
Sbjct: 297 PNMPYRCNVAVKMLXEDATEHELADLVSEMEVMKTIG 333
>UniRef50_Q7S415 Cluster: Predicted protein; n=1; Neurospora
crassa|Rep: Predicted protein - Neurospora crassa
Length = 738
Score = 31.9 bits (69), Expect = 8.9
Identities = 18/63 (28%), Positives = 22/63 (34%)
Frame = +2
Query: 239 NTKSGPNIHTRPDLGSAPPHAGAPDSRARPSGA*PRDGIAGRSHSTRRLPYRPPFGGHPL 418
NT SG + H P H + + RP P L YRP G P
Sbjct: 8 NTISGADSHATPMSAITSSHISSSRYQTRPQAQTPAQTTTAFIFHVSTLVYRPRSAGSPP 67
Query: 419 HIG 427
H+G
Sbjct: 68 HVG 70
>UniRef50_Q2TXY4 Cluster: Predicted protein; n=2; Aspergillus
oryzae|Rep: Predicted protein - Aspergillus oryzae
Length = 474
Score = 31.9 bits (69), Expect = 8.9
Identities = 29/96 (30%), Positives = 36/96 (37%), Gaps = 5/96 (5%)
Frame = +2
Query: 242 TKSGPNIHTRPDLGSAPPHAGAPDSRARP-SGA*PRDGIAGRSHSTRRLPYRPPFGGHPL 418
T S P P G PP G P + P +G P G + ST PP GG P
Sbjct: 237 TGSTPPSGGTPPSGGTPPTGGTPPTGGTPPTGGTPPTGGTPPTGSTPPSGGNPPIGGTPP 296
Query: 419 HIGHRWPPWPGKISPGDHIA----DTYCSRSPGQSP 514
G PP G G + + D C+ + G P
Sbjct: 297 SGG--TPPTSGTPPTGSNTSCEEDDDTCTPTGGTPP 330
>UniRef50_Q0U9H2 Cluster: Putative uncharacterized protein; n=1;
Phaeosphaeria nodorum|Rep: Putative uncharacterized
protein - Phaeosphaeria nodorum (Septoria nodorum)
Length = 393
Score = 31.9 bits (69), Expect = 8.9
Identities = 11/22 (50%), Positives = 15/22 (68%)
Frame = +1
Query: 160 QYPGRDPVQWRVAPSSHPLHHP 225
Q P ++ V+W PS+HP HHP
Sbjct: 221 QAPHQESVRWSPHPSAHPQHHP 242
>UniRef50_A7BIR9 Cluster: Gag protein; n=1; Lentinula edodes|Rep:
Gag protein - Lentinula edodes (Shiitake mushroom)
(Lentinus edodes)
Length = 401
Score = 31.9 bits (69), Expect = 8.9
Identities = 12/29 (41%), Positives = 15/29 (51%)
Frame = -2
Query: 491 CNKCQQYGHPEKFCRAKEATCGRCGEDGH 405
C C GH ++ C +E TC CG GH
Sbjct: 264 CFGCGAQGHVKQNCPHRETTCRYCGRRGH 292
>UniRef50_O94855 Cluster: Protein transport protein Sec24D; n=11;
Eutheria|Rep: Protein transport protein Sec24D - Homo
sapiens (Human)
Length = 1032
Score = 31.9 bits (69), Expect = 8.9
Identities = 27/93 (29%), Positives = 40/93 (43%), Gaps = 10/93 (10%)
Frame = +2
Query: 254 PNIHTRPDLGSAPPHAGA---PDSRARPSGA*PRDGIAGRSHSTRRLPYRPP------FG 406
P +P +G +PPH G P A P+G G G + + LP PP FG
Sbjct: 11 PYSQPQPGIGLSPPHYGHYGDPSHTASPTGMMKPAGPLGATATRGMLPPGPPPPGPHQFG 70
Query: 407 GHPLH-IGHRWPPWPGKISPGDHIADTYCSRSP 502
+ H GH +PG P +++A ++ P
Sbjct: 71 QNGAHATGHPPQRFPGP-PPVNNVASSHAPYQP 102
>UniRef50_P28284 Cluster: Trans-acting transcriptional protein ICP0;
n=3; Human herpesvirus 2|Rep: Trans-acting
transcriptional protein ICP0 - Human herpesvirus 2
(strain HG52) (HHV-2) (Human herpes simplex virus2)
Length = 825
Score = 31.9 bits (69), Expect = 8.9
Identities = 16/47 (34%), Positives = 21/47 (44%), Gaps = 1/47 (2%)
Frame = +2
Query: 377 RRLPYRPPFGGHPLHIGHRWPPWPGKISPGDHIADT-YCSRSPGQSP 514
R P GGH + PPWPG D +AD Y +P ++P
Sbjct: 217 RTAPRSLSLGGHTVRALSPTPPWPGTDDEDDDLADVDYVPPAPRRAP 263
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 678,882,328
Number of Sequences: 1657284
Number of extensions: 17593332
Number of successful extensions: 60353
Number of sequences better than 10.0: 183
Number of HSP's better than 10.0 without gapping: 55187
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 60074
length of database: 575,637,011
effective HSP length: 95
effective length of database: 418,195,031
effective search space used: 31782822356
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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