Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= epV30522
(516 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF079509-1|AAC28388.1| 720|Caenorhabditis elegans germline RNA ... 37 0.010
AF003145-4|AAB57719.1| 720|Caenorhabditis elegans Germ-line hel... 37 0.010
U78081-1|AAB84362.1| 246|Caenorhabditis elegans RNA polymerase ... 31 0.49
AC024832-4|AAF59612.1| 250|Caenorhabditis elegans Mediator prot... 31 0.49
U62772-1|AAB04136.1| 763|Caenorhabditis elegans RNA helicase pr... 31 0.65
U60449-1|AAB03510.1| 974|Caenorhabditis elegans GLH-2 protein. 31 0.65
U60194-1|AAB03337.1| 974|Caenorhabditis elegans RNA helicase GL... 31 0.65
L19948-1|AAC27384.1| 763|Caenorhabditis elegans RNA helicase pr... 31 0.65
AF000197-1|AAB52901.2| 763|Caenorhabditis elegans Germ-line hel... 31 0.65
AC006625-11|AAK68269.1| 974|Caenorhabditis elegans Germ-line he... 31 0.65
AC024214-13|AAM97984.1| 296|Caenorhabditis elegans Collagen pro... 29 1.5
Z81479-3|CAB03942.1| 283|Caenorhabditis elegans Hypothetical pr... 29 2.0
Z81479-2|CAB03941.1| 283|Caenorhabditis elegans Hypothetical pr... 29 2.0
AF079508-1|AAC28387.1| 1156|Caenorhabditis elegans germline RNA ... 29 2.0
AF039718-2|AAB96745.2| 1156|Caenorhabditis elegans Germ-line hel... 29 2.0
AL034393-11|CAA22324.2| 2417|Caenorhabditis elegans Hypothetical... 28 3.4
AJ250261-1|CAB59919.1| 2417|Caenorhabditis elegans hypothetical ... 28 3.4
AC024817-54|AAF59564.1| 229|Caenorhabditis elegans Hypothetical... 28 3.4
AC006672-5|AAM98003.1| 42|Caenorhabditis elegans Hypothetical ... 28 3.4
AC006672-4|AAK84542.1| 151|Caenorhabditis elegans Hypothetical ... 28 3.4
Z30317-6|CAA82972.3| 193|Caenorhabditis elegans Hypothetical pr... 28 4.6
AL032643-5|CAA21656.1| 622|Caenorhabditis elegans Hypothetical ... 28 4.6
Z81110-6|CAB03260.2| 1011|Caenorhabditis elegans Hypothetical pr... 27 6.0
Z79596-2|CAC42251.1| 838|Caenorhabditis elegans Hypothetical pr... 27 6.0
Z79596-1|CAB01857.1| 830|Caenorhabditis elegans Hypothetical pr... 27 6.0
L29031-1|AAB72228.2| 830|Caenorhabditis elegans dynamin protein. 27 6.0
AF167982-1|AAD50438.1| 838|Caenorhabditis elegans dynamin protein. 27 6.0
AC025721-11|AAK29900.1| 78|Caenorhabditis elegans Hypothetical... 27 6.0
Z96047-4|CAB09414.1| 796|Caenorhabditis elegans Hypothetical pr... 27 8.0
Z67738-4|CAJ43444.1| 279|Caenorhabditis elegans Hypothetical pr... 27 8.0
Z67738-3|CAA91544.2| 332|Caenorhabditis elegans Hypothetical pr... 27 8.0
Z54237-5|CAN86900.1| 273|Caenorhabditis elegans Hypothetical pr... 27 8.0
Z54237-4|CAN86899.1| 297|Caenorhabditis elegans Hypothetical pr... 27 8.0
Z50857-5|CAJ43436.1| 719|Caenorhabditis elegans Hypothetical pr... 27 8.0
Z50857-4|CAC42283.1| 694|Caenorhabditis elegans Hypothetical pr... 27 8.0
Z50857-3|CAC42284.1| 753|Caenorhabditis elegans Hypothetical pr... 27 8.0
Z35639-8|CAI46560.1| 634|Caenorhabditis elegans Hypothetical pr... 27 8.0
Z35639-7|CAA84697.3| 959|Caenorhabditis elegans Hypothetical pr... 27 8.0
AY571963-1|AAS78587.1| 959|Caenorhabditis elegans ATX-2 protein. 27 8.0
AL110490-3|CAB54449.1| 892|Caenorhabditis elegans Hypothetical ... 27 8.0
AF136239-1|AAD34463.1| 694|Caenorhabditis elegans DAF-12 A2 pro... 27 8.0
AF136238-1|AAD34462.1| 753|Caenorhabditis elegans DAF-12 A1 pro... 27 8.0
>AF079509-1|AAC28388.1| 720|Caenorhabditis elegans germline RNA
helicase-3 protein.
Length = 720
Score = 36.7 bits (81), Expect = 0.010
Identities = 14/32 (43%), Positives = 18/32 (56%)
Frame = -2
Query: 497 TCCNKCQQYGHPEKFCRAKEATCGRCGEDGHR 402
TC N C++YGH C A + C CG+ HR
Sbjct: 203 TCFN-CKKYGHRATECSAPQRECANCGDPNHR 233
>AF003145-4|AAB57719.1| 720|Caenorhabditis elegans Germ-line
helicase protein 3 protein.
Length = 720
Score = 36.7 bits (81), Expect = 0.010
Identities = 14/32 (43%), Positives = 18/32 (56%)
Frame = -2
Query: 497 TCCNKCQQYGHPEKFCRAKEATCGRCGEDGHR 402
TC N C++YGH C A + C CG+ HR
Sbjct: 203 TCFN-CKKYGHRATECSAPQRECANCGDPNHR 233
>U78081-1|AAB84362.1| 246|Caenorhabditis elegans RNA polymerase
transcriptionalregulation mediator protein.
Length = 246
Score = 31.1 bits (67), Expect = 0.49
Identities = 10/30 (33%), Positives = 18/30 (60%)
Frame = +2
Query: 410 HPLHIGHRWPPWPGKISPGDHIADTYCSRS 499
+PLH+ R P WP D++ D +C+++
Sbjct: 11 NPLHVSFRNPQWPPNFINKDNVLDYFCNQA 40
>AC024832-4|AAF59612.1| 250|Caenorhabditis elegans Mediator protein
6 protein.
Length = 250
Score = 31.1 bits (67), Expect = 0.49
Identities = 10/30 (33%), Positives = 18/30 (60%)
Frame = +2
Query: 410 HPLHIGHRWPPWPGKISPGDHIADTYCSRS 499
+PLH+ R P WP D++ D +C+++
Sbjct: 15 NPLHVSFRNPQWPPNFINKDNVLDYFCNQA 44
>U62772-1|AAB04136.1| 763|Caenorhabditis elegans RNA helicase
protein.
Length = 763
Score = 30.7 bits (66), Expect = 0.65
Identities = 12/30 (40%), Positives = 13/30 (43%)
Frame = -2
Query: 491 CNKCQQYGHPEKFCRAKEATCGRCGEDGHR 402
C C+ GH C C CGE GHR
Sbjct: 244 CFNCKGEGHRSAECPEPPRGCFNCGEQGHR 273
>U60449-1|AAB03510.1| 974|Caenorhabditis elegans GLH-2 protein.
Length = 974
Score = 30.7 bits (66), Expect = 0.65
Identities = 12/30 (40%), Positives = 13/30 (43%)
Frame = -2
Query: 491 CNKCQQYGHPEKFCRAKEATCGRCGEDGHR 402
C C+ GH C C CGE GHR
Sbjct: 455 CFNCKGEGHRSAECPEPPRGCFNCGEQGHR 484
>U60194-1|AAB03337.1| 974|Caenorhabditis elegans RNA helicase GLH-2
protein.
Length = 974
Score = 30.7 bits (66), Expect = 0.65
Identities = 12/30 (40%), Positives = 13/30 (43%)
Frame = -2
Query: 491 CNKCQQYGHPEKFCRAKEATCGRCGEDGHR 402
C C+ GH C C CGE GHR
Sbjct: 455 CFNCKGEGHRSAECPEPPRGCFNCGEQGHR 484
>L19948-1|AAC27384.1| 763|Caenorhabditis elegans RNA helicase
protein.
Length = 763
Score = 30.7 bits (66), Expect = 0.65
Identities = 12/30 (40%), Positives = 13/30 (43%)
Frame = -2
Query: 491 CNKCQQYGHPEKFCRAKEATCGRCGEDGHR 402
C C+ GH C C CGE GHR
Sbjct: 244 CFNCKGEGHRSAECPEPPRGCFNCGEQGHR 273
>AF000197-1|AAB52901.2| 763|Caenorhabditis elegans Germ-line
helicase protein 1 protein.
Length = 763
Score = 30.7 bits (66), Expect = 0.65
Identities = 12/30 (40%), Positives = 13/30 (43%)
Frame = -2
Query: 491 CNKCQQYGHPEKFCRAKEATCGRCGEDGHR 402
C C+ GH C C CGE GHR
Sbjct: 244 CFNCKGEGHRSAECPEPPRGCFNCGEQGHR 273
>AC006625-11|AAK68269.1| 974|Caenorhabditis elegans Germ-line
helicase protein 2 protein.
Length = 974
Score = 30.7 bits (66), Expect = 0.65
Identities = 12/30 (40%), Positives = 13/30 (43%)
Frame = -2
Query: 491 CNKCQQYGHPEKFCRAKEATCGRCGEDGHR 402
C C+ GH C C CGE GHR
Sbjct: 455 CFNCKGEGHRSAECPEPPRGCFNCGEQGHR 484
>AC024214-13|AAM97984.1| 296|Caenorhabditis elegans Collagen
protein 106 protein.
Length = 296
Score = 29.5 bits (63), Expect = 1.5
Identities = 20/59 (33%), Positives = 23/59 (38%)
Frame = +2
Query: 272 PDLGSAPPHAGAPDSRARPSGA*PRDGIAGRSHSTRRLPYRPPFGGHPLHIGHRWPPWP 448
P P G + +P A PR G G T Y P GHP + G R PP P
Sbjct: 170 PGSPGGPGETGPQGHQGKPGRAGPR-GPPGAKGQT----YLPGSAGHPGNSGRRGPPGP 223
>Z81479-3|CAB03942.1| 283|Caenorhabditis elegans Hypothetical
protein C34F6.3 protein.
Length = 283
Score = 29.1 bits (62), Expect = 2.0
Identities = 23/77 (29%), Positives = 28/77 (36%), Gaps = 4/77 (5%)
Frame = +2
Query: 290 PPHAGAPDSRARPSGA*PRDGIAGRSHSTRRLPYRPPFGGHPLHIGHRWPP----WPGKI 457
PP P A P G R G AG++ S P +P G P G P PG+
Sbjct: 176 PPGPRGPPGEAGPDGEGGRPGQAGQTRSAPSPPGQPGQPGEPGSPGEPGPDGRAGHPGRN 235
Query: 458 SPGDHIADTYCSRSPGQ 508
P D PG+
Sbjct: 236 GPPGPPGDNGGQGEPGK 252
>Z81479-2|CAB03941.1| 283|Caenorhabditis elegans Hypothetical
protein C34F6.2 protein.
Length = 283
Score = 29.1 bits (62), Expect = 2.0
Identities = 23/77 (29%), Positives = 28/77 (36%), Gaps = 4/77 (5%)
Frame = +2
Query: 290 PPHAGAPDSRARPSGA*PRDGIAGRSHSTRRLPYRPPFGGHPLHIGHRWPP----WPGKI 457
PP P A P G R G AG++ S P +P G P G P PG+
Sbjct: 176 PPGPRGPPGEAGPDGEGGRPGQAGQTRSAPSPPGQPGQPGEPGSPGEPGPDGRAGHPGRN 235
Query: 458 SPGDHIADTYCSRSPGQ 508
P D PG+
Sbjct: 236 GPPGPPGDNGGQGEPGK 252
>AF079508-1|AAC28387.1| 1156|Caenorhabditis elegans germline RNA
helicase-4 protein.
Length = 1156
Score = 29.1 bits (62), Expect = 2.0
Identities = 12/32 (37%), Positives = 14/32 (43%), Gaps = 3/32 (9%)
Frame = -2
Query: 491 CNKCQQYGHPEKFC---RAKEATCGRCGEDGH 405
C C+Q GH C R C CG +GH
Sbjct: 595 CRNCEQLGHFASDCDQPRVPRGPCRNCGIEGH 626
Score = 28.3 bits (60), Expect = 3.4
Identities = 15/35 (42%), Positives = 18/35 (51%), Gaps = 6/35 (17%)
Frame = -2
Query: 491 CNKCQQYGHPEKFCRAK----EAT--CGRCGEDGH 405
C C Q GH K C+ + E T C RC E+GH
Sbjct: 641 CRNCGQEGHFAKDCQNERVRMEPTEPCRRCAEEGH 675
>AF039718-2|AAB96745.2| 1156|Caenorhabditis elegans Germ-line
helicase protein 4 protein.
Length = 1156
Score = 29.1 bits (62), Expect = 2.0
Identities = 12/32 (37%), Positives = 14/32 (43%), Gaps = 3/32 (9%)
Frame = -2
Query: 491 CNKCQQYGHPEKFC---RAKEATCGRCGEDGH 405
C C+Q GH C R C CG +GH
Sbjct: 595 CRNCEQLGHFASDCDQPRVPRGPCRNCGIEGH 626
Score = 28.3 bits (60), Expect = 3.4
Identities = 15/35 (42%), Positives = 18/35 (51%), Gaps = 6/35 (17%)
Frame = -2
Query: 491 CNKCQQYGHPEKFCRAK----EAT--CGRCGEDGH 405
C C Q GH K C+ + E T C RC E+GH
Sbjct: 641 CRNCGQEGHFAKDCQNERVRMEPTEPCRRCAEEGH 675
>AL034393-11|CAA22324.2| 2417|Caenorhabditis elegans Hypothetical
protein Y18D10A.13 protein.
Length = 2417
Score = 28.3 bits (60), Expect = 3.4
Identities = 15/46 (32%), Positives = 25/46 (54%)
Frame = +3
Query: 300 PARRTVARGRRVHSLATESPAGRTARGGCLTGLHSVAILSTSATGG 437
P+ +V+RG + A + AG +++ L G S A ++SA GG
Sbjct: 1147 PSTESVSRGTGAGAAAAAAAAGASSKDTILPGTVSSASSTSSAAGG 1192
>AJ250261-1|CAB59919.1| 2417|Caenorhabditis elegans hypothetical
protein protein.
Length = 2417
Score = 28.3 bits (60), Expect = 3.4
Identities = 15/46 (32%), Positives = 25/46 (54%)
Frame = +3
Query: 300 PARRTVARGRRVHSLATESPAGRTARGGCLTGLHSVAILSTSATGG 437
P+ +V+RG + A + AG +++ L G S A ++SA GG
Sbjct: 1147 PSTESVSRGTGAGAAAAAAAAGASSKDTILPGTVSSASSTSSAAGG 1192
>AC024817-54|AAF59564.1| 229|Caenorhabditis elegans Hypothetical
protein Y54G2A.27 protein.
Length = 229
Score = 28.3 bits (60), Expect = 3.4
Identities = 15/34 (44%), Positives = 17/34 (50%)
Frame = -1
Query: 135 WSGS*PNVEHTPRRVCISAIGCSPARFCTTLAAH 34
WS S P+ H RRV S+ SP C AAH
Sbjct: 195 WSPSSPHSVHCHRRVGWSSSSSSPLSRCRARAAH 228
>AC006672-5|AAM98003.1| 42|Caenorhabditis elegans Hypothetical
protein K08D12.3b protein.
Length = 42
Score = 28.3 bits (60), Expect = 3.4
Identities = 13/28 (46%), Positives = 15/28 (53%)
Frame = -2
Query: 491 CNKCQQYGHPEKFCRAKEATCGRCGEDG 408
C KCQQ GH + C E+ GR G G
Sbjct: 6 CYKCQQPGHISRNCPNGESDGGRRGGGG 33
>AC006672-4|AAK84542.1| 151|Caenorhabditis elegans Hypothetical
protein K08D12.3a protein.
Length = 151
Score = 28.3 bits (60), Expect = 3.4
Identities = 13/28 (46%), Positives = 15/28 (53%)
Frame = -2
Query: 491 CNKCQQYGHPEKFCRAKEATCGRCGEDG 408
C KCQQ GH + C E+ GR G G
Sbjct: 6 CYKCQQPGHISRNCPNGESDGGRRGGGG 33
>Z30317-6|CAA82972.3| 193|Caenorhabditis elegans Hypothetical
protein T16G12.3 protein.
Length = 193
Score = 27.9 bits (59), Expect = 4.6
Identities = 18/70 (25%), Positives = 28/70 (40%)
Frame = +2
Query: 224 QIDLANTKSGPNIHTRPDLGSAPPHAGAPDSRARPSGA*PRDGIAGRSHSTRRLPYRPPF 403
++D SG ++H P LGS + + S R + + S +R + P
Sbjct: 38 RMDSQRASSGSDVHGHPSLGSQSHNLTSAQSEGRNAHKDLHERHVHPSQGYQRHGSKAPA 97
Query: 404 GGHPLHIGHR 433
GHP G R
Sbjct: 98 HGHPSSQGAR 107
>AL032643-5|CAA21656.1| 622|Caenorhabditis elegans Hypothetical
protein Y54E5A.7 protein.
Length = 622
Score = 27.9 bits (59), Expect = 4.6
Identities = 18/41 (43%), Positives = 20/41 (48%), Gaps = 1/41 (2%)
Frame = +2
Query: 209 ILCTTQIDLANT-KSGPNIHTRPDLGSAPPHAGAPDSRARP 328
ILC IDLANT PN T G +P + RARP
Sbjct: 324 ILCLRYIDLANTLHEPPNCFTNSTTGRSP---SPTEIRARP 361
>Z81110-6|CAB03260.2| 1011|Caenorhabditis elegans Hypothetical
protein T01D3.3b protein.
Length = 1011
Score = 27.5 bits (58), Expect = 6.0
Identities = 13/33 (39%), Positives = 16/33 (48%), Gaps = 1/33 (3%)
Frame = -2
Query: 248 TSYWPNQSGWCRGCD-EGATLHCTGSRPGYCSC 153
+S W G R C+ EG+ HC SR Y C
Sbjct: 12 SSSWKEVHGQLRLCEAEGSCRHCADSRYSYYRC 44
>Z79596-2|CAC42251.1| 838|Caenorhabditis elegans Hypothetical
protein C02C6.1b protein.
Length = 838
Score = 27.5 bits (58), Expect = 6.0
Identities = 21/56 (37%), Positives = 22/56 (39%), Gaps = 1/56 (1%)
Frame = +2
Query: 278 LGSAPPHAGAPDSRARPSGA*PRDGIAGRSHSTRRLPYRPPFG-GHPLHIGHRWPP 442
LG PP D R PSG P A R+ P P G G P G R PP
Sbjct: 744 LGDQPPPLPMSDYRPHPSGPSPVPRPAPAPPGGRQAPMPPRGGPGAPPPPGMRPPP 799
>Z79596-1|CAB01857.1| 830|Caenorhabditis elegans Hypothetical
protein C02C6.1a protein.
Length = 830
Score = 27.5 bits (58), Expect = 6.0
Identities = 21/56 (37%), Positives = 22/56 (39%), Gaps = 1/56 (1%)
Frame = +2
Query: 278 LGSAPPHAGAPDSRARPSGA*PRDGIAGRSHSTRRLPYRPPFG-GHPLHIGHRWPP 442
LG PP D R PSG P A R+ P P G G P G R PP
Sbjct: 744 LGDQPPPLPMSDYRPHPSGPSPVPRPAPAPPGGRQAPMPPRGGPGAPPPPGMRPPP 799
>L29031-1|AAB72228.2| 830|Caenorhabditis elegans dynamin protein.
Length = 830
Score = 27.5 bits (58), Expect = 6.0
Identities = 21/56 (37%), Positives = 22/56 (39%), Gaps = 1/56 (1%)
Frame = +2
Query: 278 LGSAPPHAGAPDSRARPSGA*PRDGIAGRSHSTRRLPYRPPFG-GHPLHIGHRWPP 442
LG PP D R PSG P A R+ P P G G P G R PP
Sbjct: 744 LGDQPPPLPMSDYRPHPSGPSPVPRPAPAPPGGRQAPMPPRGGPGAPPPPGMRPPP 799
>AF167982-1|AAD50438.1| 838|Caenorhabditis elegans dynamin protein.
Length = 838
Score = 27.5 bits (58), Expect = 6.0
Identities = 21/56 (37%), Positives = 22/56 (39%), Gaps = 1/56 (1%)
Frame = +2
Query: 278 LGSAPPHAGAPDSRARPSGA*PRDGIAGRSHSTRRLPYRPPFG-GHPLHIGHRWPP 442
LG PP D R PSG P A R+ P P G G P G R PP
Sbjct: 744 LGDQPPPLPMSDYRPHPSGPSPVPRPAPAPPGGRQAPMPPRGGPGAPPPPGMRPPP 799
>AC025721-11|AAK29900.1| 78|Caenorhabditis elegans Hypothetical
protein Y48G8AL.12 protein.
Length = 78
Score = 27.5 bits (58), Expect = 6.0
Identities = 16/41 (39%), Positives = 17/41 (41%), Gaps = 2/41 (4%)
Frame = +1
Query: 4 PTPQCALPLYVCC*GGA--EPRRGAPYCGYTHPPWGVLHIG 120
P P CA P C GGA P AP Y P G +G
Sbjct: 36 PPPACAPPPAPACGGGAPPPPAYAAPAPSYGAPAGGAYPVG 76
>Z96047-4|CAB09414.1| 796|Caenorhabditis elegans Hypothetical
protein DY3.5 protein.
Length = 796
Score = 27.1 bits (57), Expect = 8.0
Identities = 15/44 (34%), Positives = 20/44 (45%)
Frame = +2
Query: 200 PRRILCTTQIDLANTKSGPNIHTRPDLGSAPPHAGAPDSRARPS 331
PR + + +A GP TRP AP + P S+ RPS
Sbjct: 602 PRPVQPVPPMSVATVTRGPPPPTRPASVIAPSSSVVPKSQPRPS 645
>Z67738-4|CAJ43444.1| 279|Caenorhabditis elegans Hypothetical
protein W03G11.1b protein.
Length = 279
Score = 27.1 bits (57), Expect = 8.0
Identities = 12/31 (38%), Positives = 16/31 (51%)
Frame = +2
Query: 272 PDLGSAPPHAGAPDSRARPSGA*PRDGIAGR 364
P+ + PP PD +G RDG+AGR
Sbjct: 136 PEAPAGPPGRPGPDGENGGAGEPGRDGLAGR 166
>Z67738-3|CAA91544.2| 332|Caenorhabditis elegans Hypothetical
protein W03G11.1a protein.
Length = 332
Score = 27.1 bits (57), Expect = 8.0
Identities = 12/31 (38%), Positives = 16/31 (51%)
Frame = +2
Query: 272 PDLGSAPPHAGAPDSRARPSGA*PRDGIAGR 364
P+ + PP PD +G RDG+AGR
Sbjct: 189 PEAPAGPPGRPGPDGENGGAGEPGRDGLAGR 219
>Z54237-5|CAN86900.1| 273|Caenorhabditis elegans Hypothetical
protein T11B7.3b protein.
Length = 273
Score = 27.1 bits (57), Expect = 8.0
Identities = 20/61 (32%), Positives = 26/61 (42%)
Frame = +2
Query: 260 IHTRPDLGSAPPHAGAPDSRARPSGA*PRDGIAGRSHSTRRLPYRPPFGGHPLHIGHRWP 439
IH +P L P AGAP + + GA G G+ + P PP G P +G
Sbjct: 174 IHGKPGLPGPPGDAGAPGAPGQ-DGAPGHPGADGQRQRGQPGPPGPP--GRPGKVGINGE 230
Query: 440 P 442
P
Sbjct: 231 P 231
>Z54237-4|CAN86899.1| 297|Caenorhabditis elegans Hypothetical
protein T11B7.3a protein.
Length = 297
Score = 27.1 bits (57), Expect = 8.0
Identities = 20/61 (32%), Positives = 26/61 (42%)
Frame = +2
Query: 260 IHTRPDLGSAPPHAGAPDSRARPSGA*PRDGIAGRSHSTRRLPYRPPFGGHPLHIGHRWP 439
IH +P L P AGAP + + GA G G+ + P PP G P +G
Sbjct: 174 IHGKPGLPGPPGDAGAPGAPGQ-DGAPGHPGADGQRQRGQPGPPGPP--GRPGKVGINGE 230
Query: 440 P 442
P
Sbjct: 231 P 231
>Z50857-5|CAJ43436.1| 719|Caenorhabditis elegans Hypothetical
protein F11A1.3d protein.
Length = 719
Score = 27.1 bits (57), Expect = 8.0
Identities = 19/53 (35%), Positives = 26/53 (49%), Gaps = 5/53 (9%)
Frame = +2
Query: 239 NTKSGPNIHTRPDLGSAPPHAGAPDSRAR---PSGA--*PRDGIAGRSHSTRR 382
+T P IH+ P +G+AP G S + SGA P DG+ S +RR
Sbjct: 27 STPDDPVIHSPPSIGAAPGMNGYHGSGVKLEESSGACGSPDDGLLDSSEESRR 79
>Z50857-4|CAC42283.1| 694|Caenorhabditis elegans Hypothetical
protein F11A1.3b protein.
Length = 694
Score = 27.1 bits (57), Expect = 8.0
Identities = 19/53 (35%), Positives = 26/53 (49%), Gaps = 5/53 (9%)
Frame = +2
Query: 239 NTKSGPNIHTRPDLGSAPPHAGAPDSRAR---PSGA--*PRDGIAGRSHSTRR 382
+T P IH+ P +G+AP G S + SGA P DG+ S +RR
Sbjct: 2 STPDDPVIHSPPSIGAAPGMNGYHGSGVKLEESSGACGSPDDGLLDSSEESRR 54
>Z50857-3|CAC42284.1| 753|Caenorhabditis elegans Hypothetical
protein F11A1.3a protein.
Length = 753
Score = 27.1 bits (57), Expect = 8.0
Identities = 19/53 (35%), Positives = 26/53 (49%), Gaps = 5/53 (9%)
Frame = +2
Query: 239 NTKSGPNIHTRPDLGSAPPHAGAPDSRAR---PSGA--*PRDGIAGRSHSTRR 382
+T P IH+ P +G+AP G S + SGA P DG+ S +RR
Sbjct: 61 STPDDPVIHSPPSIGAAPGMNGYHGSGVKLEESSGACGSPDDGLLDSSEESRR 113
>Z35639-8|CAI46560.1| 634|Caenorhabditis elegans Hypothetical
protein D2045.1b protein.
Length = 634
Score = 27.1 bits (57), Expect = 8.0
Identities = 8/19 (42%), Positives = 12/19 (63%)
Frame = +2
Query: 272 PDLGSAPPHAGAPDSRARP 328
P +G PPH G P ++ +P
Sbjct: 213 PGMGMVPPHMGGPQNQGQP 231
>Z35639-7|CAA84697.3| 959|Caenorhabditis elegans Hypothetical
protein D2045.1a protein.
Length = 959
Score = 27.1 bits (57), Expect = 8.0
Identities = 8/19 (42%), Positives = 12/19 (63%)
Frame = +2
Query: 272 PDLGSAPPHAGAPDSRARP 328
P +G PPH G P ++ +P
Sbjct: 538 PGMGMVPPHMGGPQNQGQP 556
>AY571963-1|AAS78587.1| 959|Caenorhabditis elegans ATX-2 protein.
Length = 959
Score = 27.1 bits (57), Expect = 8.0
Identities = 8/19 (42%), Positives = 12/19 (63%)
Frame = +2
Query: 272 PDLGSAPPHAGAPDSRARP 328
P +G PPH G P ++ +P
Sbjct: 538 PGMGMVPPHMGGPQNQGQP 556
>AL110490-3|CAB54449.1| 892|Caenorhabditis elegans Hypothetical
protein Y48B6A.3 protein.
Length = 892
Score = 27.1 bits (57), Expect = 8.0
Identities = 10/18 (55%), Positives = 11/18 (61%)
Frame = -2
Query: 491 CNKCQQYGHPEKFCRAKE 438
C+ C QYGH K CR E
Sbjct: 264 CDLCGQYGHELKECRGAE 281
>AF136239-1|AAD34463.1| 694|Caenorhabditis elegans DAF-12 A2
protein.
Length = 694
Score = 27.1 bits (57), Expect = 8.0
Identities = 19/53 (35%), Positives = 26/53 (49%), Gaps = 5/53 (9%)
Frame = +2
Query: 239 NTKSGPNIHTRPDLGSAPPHAGAPDSRAR---PSGA--*PRDGIAGRSHSTRR 382
+T P IH+ P +G+AP G S + SGA P DG+ S +RR
Sbjct: 2 STPDDPVIHSPPSIGAAPGMNGYHGSGVKLEESSGACGSPDDGLLDSSEESRR 54
>AF136238-1|AAD34462.1| 753|Caenorhabditis elegans DAF-12 A1
protein.
Length = 753
Score = 27.1 bits (57), Expect = 8.0
Identities = 19/53 (35%), Positives = 26/53 (49%), Gaps = 5/53 (9%)
Frame = +2
Query: 239 NTKSGPNIHTRPDLGSAPPHAGAPDSRAR---PSGA--*PRDGIAGRSHSTRR 382
+T P IH+ P +G+AP G S + SGA P DG+ S +RR
Sbjct: 61 STPDDPVIHSPPSIGAAPGMNGYHGSGVKLEESSGACGSPDDGLLDSSEESRR 113
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,944,528
Number of Sequences: 27780
Number of extensions: 386334
Number of successful extensions: 1195
Number of sequences better than 10.0: 42
Number of HSP's better than 10.0 without gapping: 1056
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1194
length of database: 12,740,198
effective HSP length: 77
effective length of database: 10,601,138
effective search space used: 996506972
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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