BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= epV30521
(516 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
L46721-1|AAC41774.1| 164|Homo sapiens mucin protein. 35 0.19
AJ298318-1|CAC83675.1| 1349|Homo sapiens mucin 5 protein. 33 0.59
AJ292079-1|CAC44892.1| 67|Homo sapiens MUC5AC protein protein. 32 1.4
Z34281-1|CAA84035.1| 62|Homo sapiens mucin protein. 30 4.2
X15218-1|CAA33288.1| 728|Homo sapiens protein ( Human ski oncog... 30 5.5
D79992-1|BAA11487.2| 2090|Homo sapiens KIAA0170 protein. 30 5.5
BX248307-2|CAM25929.1| 2089|Homo sapiens mediator of DNA damage ... 30 5.5
BC131491-1|AAI31492.1| 778|Homo sapiens MDC1 protein protein. 30 5.5
BA000025-70|BAB63322.1| 2090|Homo sapiens KIAA0170 protein. 30 5.5
AY334557-1|AAP97864.1| 168|Homo sapiens ski oncoprotein protein. 30 5.5
AL845353-22|CAI41891.1| 2089|Homo sapiens mediator of DNA damage... 30 5.5
AL845353-21|CAI41890.1| 1244|Homo sapiens mediator of DNA damage... 30 5.5
AL662848-3|CAI17440.1| 2089|Homo sapiens mediator of DNA damage ... 30 5.5
AL662797-7|CAI18195.1| 2089|Homo sapiens mediator of DNA damage ... 30 5.5
AL590822-8|CAI12482.1| 728|Homo sapiens v-ski sarcoma viral onc... 30 5.5
AB202097-1|BAE78617.1| 2089|Homo sapiens mediator of DNA damage ... 30 5.5
AB103605-1|BAF31266.1| 2089|Homo sapiens KIAA0170 protein protein. 30 5.5
AB088099-1|BAC54931.1| 2089|Homo sapiens homologue to Drosophila... 30 5.5
Z34277-1|CAA84031.1| 477|Homo sapiens mucin protein. 29 7.3
M94131-1|AAA59163.1| 1270|Homo sapiens mucin protein. 29 9.7
M74027-1|AAA59875.1| 573|Homo sapiens mucin protein. 29 9.7
L21998-1|AAB95295.1| 5179|Homo sapiens mucin protein. 29 9.7
AL162458-3|CAC10457.1| 1342|Homo sapiens zinc finger protein 335... 29 9.7
AK026157-1|BAB15379.1| 829|Homo sapiens protein ( Homo sapiens ... 29 9.7
AF395833-1|AAN09900.1| 1342|Homo sapiens zinc-finger/leucine-zip... 29 9.7
>L46721-1|AAC41774.1| 164|Homo sapiens mucin protein.
Length = 164
Score = 34.7 bits (76), Expect = 0.19
Identities = 20/55 (36%), Positives = 25/55 (45%)
Frame = +3
Query: 339 PKATTTCTRPRTRFSLKKPARSRTLAPKTKASRSRDSTNTLAPTVSPTE*TTLLT 503
P TT+ T T + P S T AP T + ++ TLAPT S T T T
Sbjct: 41 PVPTTSTTSAPTTSTTSAPTTSTTSAPTTSTPSAPTTSTTLAPTTSTTSAPTTST 95
Score = 30.7 bits (66), Expect = 3.2
Identities = 20/56 (35%), Positives = 27/56 (48%)
Frame = +3
Query: 348 TTTCTRPRTRFSLKKPARSRTLAPKTKASRSRDSTNTLAPTVSPTE*TTLLTKTVS 515
TT+ T T + P S TLAP T + + ++ T PT S T +T T T S
Sbjct: 60 TTSTTSAPTTSTPSAPTTSTTLAPTTSTTSAPTTSTTSTPTSSTT--STPQTSTTS 113
>AJ298318-1|CAC83675.1| 1349|Homo sapiens mucin 5 protein.
Length = 1349
Score = 33.1 bits (72), Expect = 0.59
Identities = 18/58 (31%), Positives = 27/58 (46%)
Frame = +3
Query: 336 LPKATTTCTRPRTRFSLKKPARSRTLAPKTKASRSRDSTNTLAPTVSPTE*TTLLTKT 509
+P +T + T T + P S T AP + + ++ TLAPT S T T T +
Sbjct: 1090 IPASTPSTTSAPTTSTTSAPTTSTTSAPTHRTTSGPTTSTTLAPTTSTTSAPTTSTNS 1147
Score = 32.3 bits (70), Expect = 1.0
Identities = 18/52 (34%), Positives = 27/52 (51%)
Frame = +3
Query: 348 TTTCTRPRTRFSLKKPARSRTLAPKTKASRSRDSTNTLAPTVSPTE*TTLLT 503
T+T + P+T ++ P S T P+T + S ++ T APT S T T T
Sbjct: 773 TSTTSTPQTS-TISSPTTSTTPTPQTSTTSSPTTSTTSAPTTSTTSAPTTST 823
Score = 31.1 bits (67), Expect = 2.4
Identities = 20/56 (35%), Positives = 26/56 (46%)
Frame = +3
Query: 348 TTTCTRPRTRFSLKKPARSRTLAPKTKASRSRDSTNTLAPTVSPTE*TTLLTKTVS 515
TT+ T T + P S T P+T S + S+ T APT S T T T+S
Sbjct: 669 TTSTTSAPTTSTTSAPTTSTTSTPQTTTSSAPTSSTTSAPTTSTISAPT--TSTIS 722
Score = 30.7 bits (66), Expect = 3.2
Identities = 19/56 (33%), Positives = 27/56 (48%)
Frame = +3
Query: 348 TTTCTRPRTRFSLKKPARSRTLAPKTKASRSRDSTNTLAPTVSPTE*TTLLTKTVS 515
TT+ T T + P S TLAP T + + ++ APT S +T T T+S
Sbjct: 1110 TTSTTSAPTHRTTSGPTTSTTLAPTTSTTSAPTTSTNSAPTTSTISAST--TSTIS 1163
Score = 30.3 bits (65), Expect = 4.2
Identities = 16/43 (37%), Positives = 21/43 (48%)
Frame = +3
Query: 348 TTTCTRPRTRFSLKKPARSRTLAPKTKASRSRDSTNTLAPTVS 476
TT+ T T + P S T P+T S + S+ T APT S
Sbjct: 804 TTSTTSAPTTSTTSAPTTSTTSTPQTSISSAPTSSTTSAPTAS 846
Score = 29.5 bits (63), Expect = 7.3
Identities = 16/43 (37%), Positives = 21/43 (48%)
Frame = +3
Query: 348 TTTCTRPRTRFSLKKPARSRTLAPKTKASRSRDSTNTLAPTVS 476
TT+ T T + P S T P+T S + S+ T APT S
Sbjct: 355 TTSTTSAPTTSTTSAPTTSTTSTPQTSISSAPTSSTTSAPTSS 397
>AJ292079-1|CAC44892.1| 67|Homo sapiens MUC5AC protein protein.
Length = 67
Score = 31.9 bits (69), Expect = 1.4
Identities = 17/45 (37%), Positives = 22/45 (48%)
Frame = +3
Query: 348 TTTCTRPRTRFSLKKPARSRTLAPKTKASRSRDSTNTLAPTVSPT 482
TT+ T T + P S T P+T S + S+ T APT S T
Sbjct: 16 TTSTTSAPTTSTTSAPTTSTTSTPQTTTSSAPTSSTTSAPTTSTT 60
>Z34281-1|CAA84035.1| 62|Homo sapiens mucin protein.
Length = 62
Score = 30.3 bits (65), Expect = 4.2
Identities = 16/43 (37%), Positives = 21/43 (48%)
Frame = +3
Query: 348 TTTCTRPRTRFSLKKPARSRTLAPKTKASRSRDSTNTLAPTVS 476
TT+ T T + P S T P+T S + S+ T APT S
Sbjct: 12 TTSTTSAPTTSTTSAPTTSTTSTPQTSISSAPTSSTTSAPTAS 54
>X15218-1|CAA33288.1| 728|Homo sapiens protein ( Human ski oncogene
mRNA. ).
Length = 728
Score = 29.9 bits (64), Expect = 5.5
Identities = 14/38 (36%), Positives = 19/38 (50%), Gaps = 1/38 (2%)
Frame = +3
Query: 339 PKATTTCTRPRTR-FSLKKPARSRTLAPKTKASRSRDS 449
P+ TCT+PR R ++ P TLAP +DS
Sbjct: 443 PEPLATCTQPRKRKLTVDTPGAPETLAPVAAPEEDKDS 480
>D79992-1|BAA11487.2| 2090|Homo sapiens KIAA0170 protein.
Length = 2090
Score = 29.9 bits (64), Expect = 5.5
Identities = 18/49 (36%), Positives = 24/49 (48%), Gaps = 1/49 (2%)
Frame = +3
Query: 339 PKATTTCTRPRTRFS-LKKPARSRTLAPKTKASRSRDSTNTLAPTVSPT 482
PK T+ TR RT S +K P + +AP+ S S + T PT T
Sbjct: 1345 PKPTSRTTRSRTNMSSVKNPESTVPIAPELPPSTSTEQPVTPEPTSRAT 1393
>BX248307-2|CAM25929.1| 2089|Homo sapiens mediator of DNA damage
checkpoint 1 protein.
Length = 2089
Score = 29.9 bits (64), Expect = 5.5
Identities = 18/49 (36%), Positives = 24/49 (48%), Gaps = 1/49 (2%)
Frame = +3
Query: 339 PKATTTCTRPRTRFS-LKKPARSRTLAPKTKASRSRDSTNTLAPTVSPT 482
PK T+ TR RT S +K P + +AP+ S S + T PT T
Sbjct: 1344 PKPTSRTTRSRTNMSSVKNPESTVPIAPELPPSTSTEQPVTPEPTSRAT 1392
>BC131491-1|AAI31492.1| 778|Homo sapiens MDC1 protein protein.
Length = 778
Score = 29.9 bits (64), Expect = 5.5
Identities = 18/49 (36%), Positives = 24/49 (48%), Gaps = 1/49 (2%)
Frame = +3
Query: 339 PKATTTCTRPRTRFS-LKKPARSRTLAPKTKASRSRDSTNTLAPTVSPT 482
PK T+ TR RT S +K P + +AP+ S S + T PT T
Sbjct: 33 PKPTSRTTRSRTNMSSVKNPESTVPIAPELPPSTSTEQPVTPEPTSRAT 81
>BA000025-70|BAB63322.1| 2090|Homo sapiens KIAA0170 protein.
Length = 2090
Score = 29.9 bits (64), Expect = 5.5
Identities = 18/49 (36%), Positives = 24/49 (48%), Gaps = 1/49 (2%)
Frame = +3
Query: 339 PKATTTCTRPRTRFS-LKKPARSRTLAPKTKASRSRDSTNTLAPTVSPT 482
PK T+ TR RT S +K P + +AP+ S S + T PT T
Sbjct: 1345 PKPTSRTTRSRTNMSSVKNPESTVPIAPELPPSTSTEQPVTPEPTSRAT 1393
>AY334557-1|AAP97864.1| 168|Homo sapiens ski oncoprotein protein.
Length = 168
Score = 29.9 bits (64), Expect = 5.5
Identities = 14/38 (36%), Positives = 19/38 (50%), Gaps = 1/38 (2%)
Frame = +3
Query: 339 PKATTTCTRPRTR-FSLKKPARSRTLAPKTKASRSRDS 449
P+ TCT+PR R ++ P TLAP +DS
Sbjct: 120 PEPLATCTQPRKRKLTVDTPGAPETLAPVAAPEEDKDS 157
>AL845353-22|CAI41891.1| 2089|Homo sapiens mediator of DNA damage
checkpoint 1 protein.
Length = 2089
Score = 29.9 bits (64), Expect = 5.5
Identities = 18/49 (36%), Positives = 24/49 (48%), Gaps = 1/49 (2%)
Frame = +3
Query: 339 PKATTTCTRPRTRFS-LKKPARSRTLAPKTKASRSRDSTNTLAPTVSPT 482
PK T+ TR RT S +K P + +AP+ S S + T PT T
Sbjct: 1344 PKPTSRTTRSRTNMSSVKNPESTVPIAPELPPSTSTEQPVTPEPTSRAT 1392
>AL845353-21|CAI41890.1| 1244|Homo sapiens mediator of DNA damage
checkpoint 1 protein.
Length = 1244
Score = 29.9 bits (64), Expect = 5.5
Identities = 18/49 (36%), Positives = 24/49 (48%), Gaps = 1/49 (2%)
Frame = +3
Query: 339 PKATTTCTRPRTRFS-LKKPARSRTLAPKTKASRSRDSTNTLAPTVSPT 482
PK T+ TR RT S +K P + +AP+ S S + T PT T
Sbjct: 734 PKPTSRTTRSRTNMSSVKNPESTVPIAPELPPSTSTEQPVTPEPTSRAT 782
>AL662848-3|CAI17440.1| 2089|Homo sapiens mediator of DNA damage
checkpoint 1 protein.
Length = 2089
Score = 29.9 bits (64), Expect = 5.5
Identities = 18/49 (36%), Positives = 24/49 (48%), Gaps = 1/49 (2%)
Frame = +3
Query: 339 PKATTTCTRPRTRFS-LKKPARSRTLAPKTKASRSRDSTNTLAPTVSPT 482
PK T+ TR RT S +K P + +AP+ S S + T PT T
Sbjct: 1344 PKPTSRTTRSRTNMSSVKNPESTVPIAPELPPSTSTEQPVTPEPTSRAT 1392
>AL662797-7|CAI18195.1| 2089|Homo sapiens mediator of DNA damage
checkpoint 1 protein.
Length = 2089
Score = 29.9 bits (64), Expect = 5.5
Identities = 18/49 (36%), Positives = 24/49 (48%), Gaps = 1/49 (2%)
Frame = +3
Query: 339 PKATTTCTRPRTRFS-LKKPARSRTLAPKTKASRSRDSTNTLAPTVSPT 482
PK T+ TR RT S +K P + +AP+ S S + T PT T
Sbjct: 1344 PKPTSRTTRSRTNMSSVKNPESTVPIAPELPPSTSTEQPVTPEPTSRAT 1392
>AL590822-8|CAI12482.1| 728|Homo sapiens v-ski sarcoma viral
oncogene homolog (avian) protein.
Length = 728
Score = 29.9 bits (64), Expect = 5.5
Identities = 14/38 (36%), Positives = 19/38 (50%), Gaps = 1/38 (2%)
Frame = +3
Query: 339 PKATTTCTRPRTR-FSLKKPARSRTLAPKTKASRSRDS 449
P+ TCT+PR R ++ P TLAP +DS
Sbjct: 443 PEPLATCTQPRKRKLTVDTPGAPETLAPVAAPEEDKDS 480
>AB202097-1|BAE78617.1| 2089|Homo sapiens mediator of DNA damage
checkpoint 1 protein.
Length = 2089
Score = 29.9 bits (64), Expect = 5.5
Identities = 18/49 (36%), Positives = 24/49 (48%), Gaps = 1/49 (2%)
Frame = +3
Query: 339 PKATTTCTRPRTRFS-LKKPARSRTLAPKTKASRSRDSTNTLAPTVSPT 482
PK T+ TR RT S +K P + +AP+ S S + T PT T
Sbjct: 1344 PKPTSRTTRSRTNMSSVKNPESTVPIAPELPPSTSTEQPVTPEPTSRAT 1392
>AB103605-1|BAF31266.1| 2089|Homo sapiens KIAA0170 protein protein.
Length = 2089
Score = 29.9 bits (64), Expect = 5.5
Identities = 18/49 (36%), Positives = 24/49 (48%), Gaps = 1/49 (2%)
Frame = +3
Query: 339 PKATTTCTRPRTRFS-LKKPARSRTLAPKTKASRSRDSTNTLAPTVSPT 482
PK T+ TR RT S +K P + +AP+ S S + T PT T
Sbjct: 1344 PKPTSRTTRSRTNMSSVKNPESTVPIAPELPPSTSTEQPVTPEPTSRAT 1392
>AB088099-1|BAC54931.1| 2089|Homo sapiens homologue to Drosophila
photoreceptor protein calphotin protein.
Length = 2089
Score = 29.9 bits (64), Expect = 5.5
Identities = 18/49 (36%), Positives = 24/49 (48%), Gaps = 1/49 (2%)
Frame = +3
Query: 339 PKATTTCTRPRTRFS-LKKPARSRTLAPKTKASRSRDSTNTLAPTVSPT 482
PK T+ TR RT S +K P + +AP+ S S + T PT T
Sbjct: 1344 PKPTSRTTRSRTNMSSVKNPESTVPIAPELPPSTSTEQPVTPEPTSRAT 1392
>Z34277-1|CAA84031.1| 477|Homo sapiens mucin protein.
Length = 477
Score = 29.5 bits (63), Expect = 7.3
Identities = 16/43 (37%), Positives = 21/43 (48%)
Frame = +3
Query: 348 TTTCTRPRTRFSLKKPARSRTLAPKTKASRSRDSTNTLAPTVS 476
TT+ T T + P S T P+T S + S+ T APT S
Sbjct: 179 TTSTTSAPTTSTTSAPTTSTTSTPQTSISSAPTSSTTSAPTSS 221
>M94131-1|AAA59163.1| 1270|Homo sapiens mucin protein.
Length = 1270
Score = 29.1 bits (62), Expect = 9.7
Identities = 18/52 (34%), Positives = 22/52 (42%)
Frame = +3
Query: 339 PKATTTCTRPRTRFSLKKPARSRTLAPKTKASRSRDSTNTLAPTVSPTE*TT 494
P TTT T P T + T P T S +T T PT +P+ TT
Sbjct: 799 PPTTTTTTPPPTTTPSPPITTTTTPLPTTTPSPPISTTTTPPPTTTPSPPTT 850
>M74027-1|AAA59875.1| 573|Homo sapiens mucin protein.
Length = 573
Score = 29.1 bits (62), Expect = 9.7
Identities = 18/52 (34%), Positives = 22/52 (42%)
Frame = +3
Query: 339 PKATTTCTRPRTRFSLKKPARSRTLAPKTKASRSRDSTNTLAPTVSPTE*TT 494
P TTT T P T + T P T S +T T PT +P+ TT
Sbjct: 82 PPTTTTTTPPPTTTPSPPITTTTTPPPTTTPSPPISTTTTPPPTTTPSPPTT 133
>L21998-1|AAB95295.1| 5179|Homo sapiens mucin protein.
Length = 5179
Score = 29.1 bits (62), Expect = 9.7
Identities = 18/52 (34%), Positives = 22/52 (42%)
Frame = +3
Query: 339 PKATTTCTRPRTRFSLKKPARSRTLAPKTKASRSRDSTNTLAPTVSPTE*TT 494
P TTT T P T + T P T S +T T PT +P+ TT
Sbjct: 1424 PPTTTTTTPPPTTTPSPPITTTTTPLPTTTPSPPISTTTTPPPTTTPSPPTT 1475
>AL162458-3|CAC10457.1| 1342|Homo sapiens zinc finger protein 335
protein.
Length = 1342
Score = 29.1 bits (62), Expect = 9.7
Identities = 15/39 (38%), Positives = 21/39 (53%)
Frame = +1
Query: 160 GIQHCSPARREAYHSRASHTHIRCQQGGHTHIRCQQGGP 276
G+QH P + Y HI+ Q+G THI+ +QG P
Sbjct: 1232 GVQHLLP---QEYVVVPEGHHIQVQEGQITHIQYEQGAP 1267
>AK026157-1|BAB15379.1| 829|Homo sapiens protein ( Homo sapiens
cDNA: FLJ22504 fis, clone HRC11430. ).
Length = 829
Score = 29.1 bits (62), Expect = 9.7
Identities = 15/39 (38%), Positives = 21/39 (53%)
Frame = +1
Query: 160 GIQHCSPARREAYHSRASHTHIRCQQGGHTHIRCQQGGP 276
G+QH P + Y HI+ Q+G THI+ +QG P
Sbjct: 719 GVQHLLP---QEYVVVPEGHHIQVQEGQITHIQYEQGAP 754
>AF395833-1|AAN09900.1| 1342|Homo sapiens zinc-finger/leucine-zipper
co-transducer NIF1 protein.
Length = 1342
Score = 29.1 bits (62), Expect = 9.7
Identities = 15/39 (38%), Positives = 21/39 (53%)
Frame = +1
Query: 160 GIQHCSPARREAYHSRASHTHIRCQQGGHTHIRCQQGGP 276
G+QH P + Y HI+ Q+G THI+ +QG P
Sbjct: 1232 GVQHLLP---QEYVVVPEGHHIQVQEGQITHIQYEQGAP 1267
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 57,830,387
Number of Sequences: 237096
Number of extensions: 1093525
Number of successful extensions: 7173
Number of sequences better than 10.0: 25
Number of HSP's better than 10.0 without gapping: 6687
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7168
length of database: 76,859,062
effective HSP length: 85
effective length of database: 56,705,902
effective search space used: 4876707572
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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