Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= epV30521
(516 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF026212-4|AAF99973.2| 386|Caenorhabditis elegans Hypothetical ... 34 0.069
Z81044-5|CAE17706.2| 460|Caenorhabditis elegans Hypothetical pr... 30 1.1
AC006797-1|AAF60743.1| 1079|Caenorhabditis elegans Hypothetical ... 29 1.5
Z72504-5|CAA96602.2| 812|Caenorhabditis elegans Hypothetical pr... 29 2.6
Z81044-11|CAB02809.2| 476|Caenorhabditis elegans Hypothetical p... 28 4.6
Z48783-2|CAC42295.1| 805|Caenorhabditis elegans Hypothetical pr... 28 4.6
Z48783-1|CAA88701.1| 780|Caenorhabditis elegans Hypothetical pr... 28 4.6
AF233652-1|AAF63475.1| 780|Caenorhabditis elegans RFX-type tran... 28 4.6
AF226156-1|AAF61564.1| 805|Caenorhabditis elegans RFX-like tran... 28 4.6
Z69792-1|CAB61002.1| 605|Caenorhabditis elegans Hypothetical pr... 27 6.0
D85744-1|BAA12861.1| 605|Caenorhabditis elegans HCH-1 protein. 27 6.0
Z82288-5|CAB05324.1| 380|Caenorhabditis elegans Hypothetical pr... 27 8.0
Z71262-12|CAA95808.1| 545|Caenorhabditis elegans Hypothetical p... 27 8.0
>AF026212-4|AAF99973.2| 386|Caenorhabditis elegans Hypothetical
protein F52G3.5 protein.
Length = 386
Score = 33.9 bits (74), Expect = 0.069
Identities = 20/57 (35%), Positives = 29/57 (50%), Gaps = 1/57 (1%)
Frame = +3
Query: 348 TTTCTRPRTRFSL-KKPARSRTLAPKTKASRSRDSTNTLAPTVSPTE*TTLLTKTVS 515
TTT P T KK ++R+ PKT + + +T T APT + E TT + V+
Sbjct: 195 TTTTEEPSTTSEYRKKSKKNRSKRPKTTKTTTTSTTTTEAPTTTTEEYTTTTEEDVT 251
>Z81044-5|CAE17706.2| 460|Caenorhabditis elegans Hypothetical
protein C30H6.11 protein.
Length = 460
Score = 29.9 bits (64), Expect = 1.1
Identities = 18/57 (31%), Positives = 26/57 (45%), Gaps = 1/57 (1%)
Frame = +3
Query: 348 TTTCTRPRTRFSLKKPARSRTLAPKTKA-SRSRDSTNTLAPTVSPTE*TTLLTKTVS 515
TTT T T + + T P T + ++ +T T PT +PT TT T T +
Sbjct: 236 TTTTTPTTTTTPATTTSETTTTTPTTTTQTTTKPTTTTTTPTTTPTTTTTPTTTTTT 292
Score = 29.1 bits (62), Expect = 2.0
Identities = 20/57 (35%), Positives = 25/57 (43%), Gaps = 1/57 (1%)
Frame = +3
Query: 348 TTTCTRPRTRFSLKKPARSRTLAPKTKASRSR-DSTNTLAPTVSPTE*TTLLTKTVS 515
TTT T T + KP + T T + + +T T A T T TT TKT S
Sbjct: 254 TTTTTPTTTTQTTTKPTTTTTTPTTTPTTTTTPTTTTTTAKTTKSTTTTTKTTKTTS 310
Score = 27.1 bits (57), Expect = 8.0
Identities = 19/60 (31%), Positives = 27/60 (45%), Gaps = 1/60 (1%)
Frame = +3
Query: 339 PKATT-TCTRPRTRFSLKKPARSRTLAPKTKASRSRDSTNTLAPTVSPTE*TTLLTKTVS 515
P TT T T P T + + T T + + ++T T PT + TE TT T T +
Sbjct: 102 PTTTTETTTTPTTETTTTPTTTTPTTTTTTPTTTTTETTTT--PTTTTTETTTTPTTTTT 159
>AC006797-1|AAF60743.1| 1079|Caenorhabditis elegans Hypothetical
protein Y51B11A.1 protein.
Length = 1079
Score = 29.5 bits (63), Expect = 1.5
Identities = 19/55 (34%), Positives = 28/55 (50%)
Frame = +3
Query: 339 PKATTTCTRPRTRFSLKKPARSRTLAPKTKASRSRDSTNTLAPTVSPTE*TTLLT 503
P TTT T P T + +P S T +T + + ++T+T AP+ S T T T
Sbjct: 118 PVQTTTTTAPET--TSTEPPSSSTSPVQTTTTTAPETTSTEAPSSSTTPVQTTTT 170
Score = 28.7 bits (61), Expect = 2.6
Identities = 18/55 (32%), Positives = 28/55 (50%)
Frame = +3
Query: 339 PKATTTCTRPRTRFSLKKPARSRTLAPKTKASRSRDSTNTLAPTVSPTE*TTLLT 503
P TTT T P T + +P S T +T + + ++T+T +P+ S T T T
Sbjct: 210 PVQTTTTTAPET--TSTEPPSSSTTPVQTTTTTAPETTSTESPSSSTTPVQTTTT 262
Score = 28.7 bits (61), Expect = 2.6
Identities = 18/55 (32%), Positives = 28/55 (50%)
Frame = +3
Query: 339 PKATTTCTRPRTRFSLKKPARSRTLAPKTKASRSRDSTNTLAPTVSPTE*TTLLT 503
P TTT T P T + +P S T +T + + ++T+T +P+ S T T T
Sbjct: 486 PVQTTTITAPET--TSTEPPSSSTTPVQTTTTTAPETTSTESPSSSTTPVQTTTT 538
Score = 27.9 bits (59), Expect = 4.6
Identities = 18/55 (32%), Positives = 27/55 (49%)
Frame = +3
Query: 339 PKATTTCTRPRTRFSLKKPARSRTLAPKTKASRSRDSTNTLAPTVSPTE*TTLLT 503
P TTT T P T + +P S T +T + + ++T+T P+ S T T T
Sbjct: 187 PVQTTTTTAPET--TSTEPPSSSTTPVQTTTTTAPETTSTEPPSSSTTPVQTTTT 239
Score = 27.9 bits (59), Expect = 4.6
Identities = 18/55 (32%), Positives = 27/55 (49%)
Frame = +3
Query: 339 PKATTTCTRPRTRFSLKKPARSRTLAPKTKASRSRDSTNTLAPTVSPTE*TTLLT 503
P TTT T P T + +P S T +T + + ++T+T P+ S T T T
Sbjct: 302 PVQTTTITAPET--TSTEPPSSSTTPVQTTTTTAPETTSTEPPSSSTTPVQTTTT 354
Score = 27.9 bits (59), Expect = 4.6
Identities = 18/55 (32%), Positives = 27/55 (49%)
Frame = +3
Query: 339 PKATTTCTRPRTRFSLKKPARSRTLAPKTKASRSRDSTNTLAPTVSPTE*TTLLT 503
P TTT T P T + +P S T +T + + ++T+T P+ S T T T
Sbjct: 417 PVQTTTITAPET--TSTEPPSSSTTPVQTTTTTAPETTSTEPPSSSTTPVQTTTT 469
Score = 27.9 bits (59), Expect = 4.6
Identities = 18/55 (32%), Positives = 27/55 (49%)
Frame = +3
Query: 339 PKATTTCTRPRTRFSLKKPARSRTLAPKTKASRSRDSTNTLAPTVSPTE*TTLLT 503
P TTT T P T + +P S T +T + + ++T+T P+ S T T T
Sbjct: 532 PVQTTTTTAPET--TSTEPPSSSTTPVQTTTTTAPETTSTEPPSSSTTPVQTTTT 584
Score = 27.9 bits (59), Expect = 4.6
Identities = 18/55 (32%), Positives = 27/55 (49%)
Frame = +3
Query: 339 PKATTTCTRPRTRFSLKKPARSRTLAPKTKASRSRDSTNTLAPTVSPTE*TTLLT 503
P TTT T P T + +P S T +T + + ++T+T P+ S T T T
Sbjct: 555 PVQTTTTTAPET--TSTEPPSSSTTPVQTTTTTAPETTSTEPPSSSTTPVQTTTT 607
Score = 27.9 bits (59), Expect = 4.6
Identities = 18/55 (32%), Positives = 27/55 (49%)
Frame = +3
Query: 339 PKATTTCTRPRTRFSLKKPARSRTLAPKTKASRSRDSTNTLAPTVSPTE*TTLLT 503
P TTT T P T + +P S T +T + + ++T+T P+ S T T T
Sbjct: 578 PVQTTTTTAPET--TSTEPPSSSTTPVQTTTTTAPETTSTEPPSSSTTPVQTTTT 630
Score = 27.9 bits (59), Expect = 4.6
Identities = 18/55 (32%), Positives = 27/55 (49%)
Frame = +3
Query: 339 PKATTTCTRPRTRFSLKKPARSRTLAPKTKASRSRDSTNTLAPTVSPTE*TTLLT 503
P TTT T P T + +P S T +T + + ++T+T P+ S T T T
Sbjct: 601 PVQTTTTTAPET--TSTEPPSSSTTPVQTTTTTAPETTSTEPPSSSTTPVQTTTT 653
Score = 27.9 bits (59), Expect = 4.6
Identities = 18/55 (32%), Positives = 27/55 (49%)
Frame = +3
Query: 339 PKATTTCTRPRTRFSLKKPARSRTLAPKTKASRSRDSTNTLAPTVSPTE*TTLLT 503
P TTT T P T + +P S T +T + + ++T+T P+ S T T T
Sbjct: 624 PVQTTTTTAPET--TSTEPPSSSTTPVQTTTTTAPETTSTEPPSSSTTPVQTTTT 676
Score = 27.5 bits (58), Expect = 6.0
Identities = 18/55 (32%), Positives = 27/55 (49%)
Frame = +3
Query: 339 PKATTTCTRPRTRFSLKKPARSRTLAPKTKASRSRDSTNTLAPTVSPTE*TTLLT 503
P TTT T P T + +P S T +T + + ++T+T P+ S T T T
Sbjct: 164 PVQTTTTTAPET--TSTEPPSSSTSPVQTTTTTAPETTSTEPPSSSTTPVQTTTT 216
Score = 27.1 bits (57), Expect = 8.0
Identities = 19/55 (34%), Positives = 28/55 (50%)
Frame = +3
Query: 339 PKATTTCTRPRTRFSLKKPARSRTLAPKTKASRSRDSTNTLAPTVSPTE*TTLLT 503
P TTT T P T S + P+ S T +T + + ++T+T P+ S T T T
Sbjct: 233 PVQTTTTTAPETT-STESPS-SSTTPVQTTTTTAPETTSTEPPSSSTTPVQTTTT 285
Score = 27.1 bits (57), Expect = 8.0
Identities = 16/48 (33%), Positives = 25/48 (52%)
Frame = +3
Query: 339 PKATTTCTRPRTRFSLKKPARSRTLAPKTKASRSRDSTNTLAPTVSPT 482
P TTT T P T + +P S T +T + + ++T+T P+ S T
Sbjct: 256 PVQTTTTTAPET--TSTEPPSSSTTPVQTTTTTAPETTSTEPPSSSTT 301
Score = 27.1 bits (57), Expect = 8.0
Identities = 16/48 (33%), Positives = 25/48 (52%)
Frame = +3
Query: 339 PKATTTCTRPRTRFSLKKPARSRTLAPKTKASRSRDSTNTLAPTVSPT 482
P TTT T P T + +P S T +T + + ++T+T P+ S T
Sbjct: 440 PVQTTTTTAPET--TSTEPPSSSTTPVQTTTTTAPETTSTEPPSSSTT 485
Score = 27.1 bits (57), Expect = 8.0
Identities = 19/55 (34%), Positives = 28/55 (50%)
Frame = +3
Query: 339 PKATTTCTRPRTRFSLKKPARSRTLAPKTKASRSRDSTNTLAPTVSPTE*TTLLT 503
P TTT T P T S + P+ S T +T + + ++T+T P+ S T T T
Sbjct: 509 PVQTTTTTAPETT-STESPS-SSTTPVQTTTTTAPETTSTEPPSSSTTPVQTTTT 561
Score = 27.1 bits (57), Expect = 8.0
Identities = 19/55 (34%), Positives = 30/55 (54%), Gaps = 2/55 (3%)
Frame = +3
Query: 339 PKATTTCTRPRTRFSLKKPARSRTLAPKTKASRSRDSTNTLAP--TVSPTE*TTL 497
P TTT T P T S + P+ S T +T + + ++T+T P + SP + TT+
Sbjct: 762 PVQTTTTTAPETT-STEPPSSSNT-PVQTTTTTAPETTSTEPPSSSTSPVQTTTI 814
Score = 27.1 bits (57), Expect = 8.0
Identities = 21/65 (32%), Positives = 30/65 (46%), Gaps = 6/65 (9%)
Frame = +3
Query: 339 PKATTTCTRPRTR-----FSLKKPARSRTL-APKTKASRSRDSTNTLAPTVSPTE*TTLL 500
P TTT T P T S P ++ T+ AP+T ++ S+NT T + T T
Sbjct: 785 PVQTTTTTAPETTSTEPPSSSTSPVQTTTITAPETTSTEPPSSSNTPVQTTTTTAPETTS 844
Query: 501 TKTVS 515
T+ S
Sbjct: 845 TEPPS 849
Score = 27.1 bits (57), Expect = 8.0
Identities = 16/48 (33%), Positives = 25/48 (52%)
Frame = +3
Query: 339 PKATTTCTRPRTRFSLKKPARSRTLAPKTKASRSRDSTNTLAPTVSPT 482
P TTT T P T + +P S T +T + + ++T+T P+ S T
Sbjct: 877 PVQTTTITAPET--TSTEPPSSSTTPVQTTTTTAPETTSTEPPSSSTT 922
>Z72504-5|CAA96602.2| 812|Caenorhabditis elegans Hypothetical
protein C29E6.1a protein.
Length = 812
Score = 28.7 bits (61), Expect = 2.6
Identities = 20/58 (34%), Positives = 26/58 (44%)
Frame = +3
Query: 342 KATTTCTRPRTRFSLKKPARSRTLAPKTKASRSRDSTNTLAPTVSPTE*TTLLTKTVS 515
+ TTT +P T S KK + T P K S+ +T T +P V T T T S
Sbjct: 375 QVTTTTKKPSTTTSTKKLTTTTTTTP--KPSQKPTTTTTKSPVVITTTTKTSPKPTTS 430
>Z81044-11|CAB02809.2| 476|Caenorhabditis elegans Hypothetical
protein C30H6.4 protein.
Length = 476
Score = 27.9 bits (59), Expect = 4.6
Identities = 18/58 (31%), Positives = 27/58 (46%), Gaps = 1/58 (1%)
Frame = +3
Query: 339 PKATTTCTRPRTRFSLKKPARSRTLAPKTKA-SRSRDSTNTLAPTVSPTE*TTLLTKT 509
P TTT T P T S + + ++ T S + +T+T PT + T TT + T
Sbjct: 265 PTTTTTTTIPSTTSSTTSTSTTTSVVTTTTVTSTTEPTTSTSTPTTTTTMQTTTPSTT 322
>Z48783-2|CAC42295.1| 805|Caenorhabditis elegans Hypothetical
protein F33H1.1b protein.
Length = 805
Score = 27.9 bits (59), Expect = 4.6
Identities = 11/32 (34%), Positives = 17/32 (53%)
Frame = +2
Query: 278 PSGAGYDYKYGIIRYDNDVAPEGYHYLYETEN 373
P+G ++ Y I Y N V P G + LY ++
Sbjct: 178 PNGTREEFDYNQIEYGNAVTPNGTYTLYAPDS 209
>Z48783-1|CAA88701.1| 780|Caenorhabditis elegans Hypothetical
protein F33H1.1a protein.
Length = 780
Score = 27.9 bits (59), Expect = 4.6
Identities = 11/32 (34%), Positives = 17/32 (53%)
Frame = +2
Query: 278 PSGAGYDYKYGIIRYDNDVAPEGYHYLYETEN 373
P+G ++ Y I Y N V P G + LY ++
Sbjct: 153 PNGTREEFDYNQIEYGNAVTPNGTYTLYAPDS 184
>AF233652-1|AAF63475.1| 780|Caenorhabditis elegans RFX-type
transcription factor DAF-19 short variant protein.
Length = 780
Score = 27.9 bits (59), Expect = 4.6
Identities = 11/32 (34%), Positives = 17/32 (53%)
Frame = +2
Query: 278 PSGAGYDYKYGIIRYDNDVAPEGYHYLYETEN 373
P+G ++ Y I Y N V P G + LY ++
Sbjct: 153 PNGTREEFDYNQIEYGNAVTPNGTYTLYAPDS 184
>AF226156-1|AAF61564.1| 805|Caenorhabditis elegans RFX-like
transcription factor DAF-19 protein.
Length = 805
Score = 27.9 bits (59), Expect = 4.6
Identities = 11/32 (34%), Positives = 17/32 (53%)
Frame = +2
Query: 278 PSGAGYDYKYGIIRYDNDVAPEGYHYLYETEN 373
P+G ++ Y I Y N V P G + LY ++
Sbjct: 178 PNGTREEFDYNQIEYGNAVTPNGTYTLYAPDS 209
>Z69792-1|CAB61002.1| 605|Caenorhabditis elegans Hypothetical
protein F40E10.1 protein.
Length = 605
Score = 27.5 bits (58), Expect = 6.0
Identities = 20/50 (40%), Positives = 26/50 (52%), Gaps = 3/50 (6%)
Frame = +3
Query: 375 RFSLK---KPARSRTLAPKTKASRSRDSTNTLAPTVSPTE*TTLLTKTVS 515
RFSL P T AP T ++ + + T+ PTVSPT TT T T +
Sbjct: 461 RFSLNYRYDPVTFSTSAPTTTSTTTTTAPITV-PTVSPTTTTTRQTTTTA 509
>D85744-1|BAA12861.1| 605|Caenorhabditis elegans HCH-1 protein.
Length = 605
Score = 27.5 bits (58), Expect = 6.0
Identities = 20/50 (40%), Positives = 26/50 (52%), Gaps = 3/50 (6%)
Frame = +3
Query: 375 RFSLK---KPARSRTLAPKTKASRSRDSTNTLAPTVSPTE*TTLLTKTVS 515
RFSL P T AP T ++ + + T+ PTVSPT TT T T +
Sbjct: 461 RFSLNYRYDPVTFSTSAPTTTSTTTTTAPITV-PTVSPTTTTTRQTTTTA 509
>Z82288-5|CAB05324.1| 380|Caenorhabditis elegans Hypothetical
protein ZK896.7 protein.
Length = 380
Score = 27.1 bits (57), Expect = 8.0
Identities = 15/47 (31%), Positives = 24/47 (51%), Gaps = 3/47 (6%)
Frame = +3
Query: 348 TTTCTRPRTRFSLKKPARSRTLA---PKTKASRSRDSTNTLAPTVSP 479
TTT TR T +++K ++ PK + S +T T+ PT +P
Sbjct: 162 TTTTTRAPTTTTVRKTTQTTATTMTTPKPTTTVSTTTTTTVPPTTTP 208
>Z71262-12|CAA95808.1| 545|Caenorhabditis elegans Hypothetical
protein F22D6.3a protein.
Length = 545
Score = 27.1 bits (57), Expect = 8.0
Identities = 16/47 (34%), Positives = 24/47 (51%), Gaps = 2/47 (4%)
Frame = +2
Query: 305 YGIIRY--DNDVAPEGYHYLYETENKILAEEAGKVENVGTENEGIKV 439
YGII+ D AP+G+ + I AG ++NV E+ G+ V
Sbjct: 178 YGIIKALPDGKSAPDGHELTVDYWEVIGKAPAGGIDNVLNESAGVDV 224
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 8,762,590
Number of Sequences: 27780
Number of extensions: 155624
Number of successful extensions: 744
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 656
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 737
length of database: 12,740,198
effective HSP length: 77
effective length of database: 10,601,138
effective search space used: 996506972
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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