Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= epV30514
(516 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U61952-7|AAB03164.1| 1042|Caenorhabditis elegans Abnormal cell l... 38 0.003
AF163018-1|AAD49323.1| 1042|Caenorhabditis elegans bromodomain p... 38 0.003
Z69787-2|CAA93635.2| 474|Caenorhabditis elegans Hypothetical pr... 30 0.85
Z78066-9|CAN86643.1| 2488|Caenorhabditis elegans Hypothetical pr... 29 1.5
Z78066-6|CAB51467.1| 2484|Caenorhabditis elegans Hypothetical pr... 29 1.5
Z78066-4|CAB01522.2| 2607|Caenorhabditis elegans Hypothetical pr... 29 1.5
U13646-6|AAC24421.2| 1376|Caenorhabditis elegans Flectin protein... 29 1.5
AC024772-3|AAF60538.1| 2344|Caenorhabditis elegans Hypothetical ... 29 2.0
Z81047-4|CAB02831.3| 364|Caenorhabditis elegans Hypothetical pr... 28 3.4
AC024809-9|AAO12399.1| 700|Caenorhabditis elegans Hypothetical ... 28 3.4
AC024809-8|AAF59546.2| 741|Caenorhabditis elegans Hypothetical ... 28 3.4
U97005-11|AAB52288.1| 891|Caenorhabditis elegans Hypothetical p... 28 4.6
Z82096-2|CAB05032.1| 211|Caenorhabditis elegans Hypothetical pr... 27 8.0
U60979-1|AAC47277.1| 211|Caenorhabditis elegans CES-2 protein. 27 8.0
AF098501-3|AAM69106.1| 275|Caenorhabditis elegans Hypothetical ... 27 8.0
AF098501-2|AAM69105.1| 298|Caenorhabditis elegans Hypothetical ... 27 8.0
AF098501-1|AAC67404.2| 548|Caenorhabditis elegans Hypothetical ... 27 8.0
>U61952-7|AAB03164.1| 1042|Caenorhabditis elegans Abnormal cell
lineage protein 49 protein.
Length = 1042
Score = 38.3 bits (85), Expect = 0.003
Identities = 17/27 (62%), Positives = 19/27 (70%)
Frame = -1
Query: 135 EGQWLCRRCLQSPSRLVNCVLCPNTGG 55
EG CRRC SP+ VNCVLCP+T G
Sbjct: 234 EGCLECRRCGISPAGRVNCVLCPSTTG 260
>AF163018-1|AAD49323.1| 1042|Caenorhabditis elegans bromodomain
protein LIN-49 protein.
Length = 1042
Score = 38.3 bits (85), Expect = 0.003
Identities = 17/27 (62%), Positives = 19/27 (70%)
Frame = -1
Query: 135 EGQWLCRRCLQSPSRLVNCVLCPNTGG 55
EG CRRC SP+ VNCVLCP+T G
Sbjct: 234 EGCLECRRCGISPAGRVNCVLCPSTTG 260
>Z69787-2|CAA93635.2| 474|Caenorhabditis elegans Hypothetical
protein C44C10.3 protein.
Length = 474
Score = 30.3 bits (65), Expect = 0.85
Identities = 22/74 (29%), Positives = 36/74 (48%)
Frame = -2
Query: 371 GIMGSVLIFLTSSDKIIVCPFNLSLIGMLAVEVEGTGLSIPTSIISSEARECDVYSVDIW 192
G++ ++F T SDK P + +I + + + GTGLS P + AR C S+
Sbjct: 95 GVLVGTVLFGTLSDKYGRKPIGILVIVIAIISLLGTGLS-PNRQLLFIARFCSGLSIAGV 153
Query: 191 SPFRCAAIFSSVIN 150
CA I S+++
Sbjct: 154 LVCICAWILESILS 167
>Z78066-9|CAN86643.1| 2488|Caenorhabditis elegans Hypothetical protein
W06A7.3f protein.
Length = 2488
Score = 29.5 bits (63), Expect = 1.5
Identities = 12/42 (28%), Positives = 22/42 (52%)
Frame = +1
Query: 268 PSTSTANIPMSERLKGHTIILSDEVKKIKTEPIIPASLMERL 393
P S + P+ E L + + D+ K + EP++P + ER+
Sbjct: 1579 PQVSESTCPIPEPLADLKLPVEDDEKTPEPEPVVPGQVQERI 1620
>Z78066-6|CAB51467.1| 2484|Caenorhabditis elegans Hypothetical protein
W06A7.3c protein.
Length = 2484
Score = 29.5 bits (63), Expect = 1.5
Identities = 12/42 (28%), Positives = 22/42 (52%)
Frame = +1
Query: 268 PSTSTANIPMSERLKGHTIILSDEVKKIKTEPIIPASLMERL 393
P S + P+ E L + + D+ K + EP++P + ER+
Sbjct: 1579 PQVSESTCPIPEPLADLKLPVEDDEKTPEPEPVVPGQVQERI 1620
>Z78066-4|CAB01522.2| 2607|Caenorhabditis elegans Hypothetical protein
W06A7.3a protein.
Length = 2607
Score = 29.5 bits (63), Expect = 1.5
Identities = 12/42 (28%), Positives = 22/42 (52%)
Frame = +1
Query: 268 PSTSTANIPMSERLKGHTIILSDEVKKIKTEPIIPASLMERL 393
P S + P+ E L + + D+ K + EP++P + ER+
Sbjct: 1579 PQVSESTCPIPEPLADLKLPVEDDEKTPEPEPVVPGQVQERI 1620
>U13646-6|AAC24421.2| 1376|Caenorhabditis elegans Flectin protein 1
protein.
Length = 1376
Score = 29.5 bits (63), Expect = 1.5
Identities = 12/29 (41%), Positives = 15/29 (51%), Gaps = 1/29 (3%)
Frame = -1
Query: 135 EGQWLCRRCLQSPSRLVNCVLCP-NTGGL 52
EG W C+RC + S C+ C TG L
Sbjct: 1124 EGDWFCQRCREEKSGRPMCMFCSRETGNL 1152
>AC024772-3|AAF60538.1| 2344|Caenorhabditis elegans Hypothetical
protein Y40C5A.3 protein.
Length = 2344
Score = 29.1 bits (62), Expect = 2.0
Identities = 21/93 (22%), Positives = 41/93 (44%), Gaps = 5/93 (5%)
Frame = +1
Query: 115 PAEPLSLR--PAKQLITEEKMAAHLNGLHIS---TEYTSHSLASEDMMDVGMDSPVPSTS 279
P E LS PA L K+ +G + +E+ S S G+ +P+T+
Sbjct: 1184 PHETLSTASPPASSLSASAKLPKSESGFMNAIPPSEFVDSSSGSSGSFGSGLQ--IPTTT 1241
Query: 280 TANIPMSERLKGHTIILSDEVKKIKTEPIIPAS 378
++ PM ++ + + L+ + + P++P S
Sbjct: 1242 DSSTPMDPSMEDYDVDLTVPTTAVTSSPVLPTS 1274
>Z81047-4|CAB02831.3| 364|Caenorhabditis elegans Hypothetical
protein C41G6.6 protein.
Length = 364
Score = 28.3 bits (60), Expect = 3.4
Identities = 12/40 (30%), Positives = 22/40 (55%)
Frame = -3
Query: 256 PYLHPSYLRRLESVMYTLLIYGVRLDARPFFLQLSIVLQV 137
PY + L+ +E + +L+I G + FFL L ++Q+
Sbjct: 244 PYYDVATLKSVEIIFGSLIINGTNFEIIDFFLNLKYIIQL 283
>AC024809-9|AAO12399.1| 700|Caenorhabditis elegans Hypothetical
protein Y53G8AR.2b protein.
Length = 700
Score = 28.3 bits (60), Expect = 3.4
Identities = 10/24 (41%), Positives = 12/24 (50%)
Frame = -1
Query: 126 WLCRRCLQSPSRLVNCVLCPNTGG 55
W C +C + CVLCP GG
Sbjct: 281 WKCAKCAHMGTPCPPCVLCPALGG 304
>AC024809-8|AAF59546.2| 741|Caenorhabditis elegans Hypothetical
protein Y53G8AR.2a protein.
Length = 741
Score = 28.3 bits (60), Expect = 3.4
Identities = 10/24 (41%), Positives = 12/24 (50%)
Frame = -1
Query: 126 WLCRRCLQSPSRLVNCVLCPNTGG 55
W C +C + CVLCP GG
Sbjct: 322 WKCAKCAHMGTPCPPCVLCPALGG 345
>U97005-11|AAB52288.1| 891|Caenorhabditis elegans Hypothetical
protein F19F10.10 protein.
Length = 891
Score = 27.9 bits (59), Expect = 4.6
Identities = 12/32 (37%), Positives = 21/32 (65%)
Frame = +1
Query: 265 VPSTSTANIPMSERLKGHTIILSDEVKKIKTE 360
+P TS++N+P++E L G D V+++K E
Sbjct: 559 LPGTSSSNLPVAENLLGTFSATFDCVQEVKQE 590
>Z82096-2|CAB05032.1| 211|Caenorhabditis elegans Hypothetical
protein ZK909.4 protein.
Length = 211
Score = 27.1 bits (57), Expect = 8.0
Identities = 24/95 (25%), Positives = 40/95 (42%), Gaps = 1/95 (1%)
Frame = +1
Query: 133 LRPAKQLITEEKMAAHLNGLHISTEYTSHSLASEDMMDVGMDSPVPSTSTANIPMSERLK 312
L P K++ E+++ A ST +SH + + M P+P + R K
Sbjct: 66 LTPTKKIKLEDELCASPVSSRSSTVSSSHFSSPQRSPSRKMSVPIPEEKKDSAYFERRRK 125
Query: 313 GHTII-LSDEVKKIKTEPIIPASLMERLEKPSMSL 414
+ S + ++ K E I AS LE+ +M L
Sbjct: 126 NNDAAKRSRDARRQKEEQI--ASKAHALERENMQL 158
>U60979-1|AAC47277.1| 211|Caenorhabditis elegans CES-2 protein.
Length = 211
Score = 27.1 bits (57), Expect = 8.0
Identities = 24/95 (25%), Positives = 40/95 (42%), Gaps = 1/95 (1%)
Frame = +1
Query: 133 LRPAKQLITEEKMAAHLNGLHISTEYTSHSLASEDMMDVGMDSPVPSTSTANIPMSERLK 312
L P K++ E+++ A ST +SH + + M P+P + R K
Sbjct: 66 LTPTKKIKLEDELCASPVSSRSSTVSSSHFSSPQRSPSRKMSVPIPEEKKDSAYFERRRK 125
Query: 313 GHTII-LSDEVKKIKTEPIIPASLMERLEKPSMSL 414
+ S + ++ K E I AS LE+ +M L
Sbjct: 126 NNDAAKRSRDARRQKEEQI--ASKAHALERENMQL 158
>AF098501-3|AAM69106.1| 275|Caenorhabditis elegans Hypothetical
protein H28G03.2c protein.
Length = 275
Score = 27.1 bits (57), Expect = 8.0
Identities = 18/65 (27%), Positives = 26/65 (40%), Gaps = 2/65 (3%)
Frame = +1
Query: 106 QAPPAEPLSLRPAKQL--ITEEKMAAHLNGLHISTEYTSHSLASEDMMDVGMDSPVPSTS 279
Q PPA+ + + Q+ IT + N L +SL + PVPS
Sbjct: 199 QPPPAKKPAAQQNPQMNRITNNLSSMLTNALKAQVSKAQNSLNNSSPTSTAPKKPVPSLM 258
Query: 280 TANIP 294
+ NIP
Sbjct: 259 SINIP 263
>AF098501-2|AAM69105.1| 298|Caenorhabditis elegans Hypothetical
protein H28G03.2b protein.
Length = 298
Score = 27.1 bits (57), Expect = 8.0
Identities = 18/65 (27%), Positives = 26/65 (40%), Gaps = 2/65 (3%)
Frame = +1
Query: 106 QAPPAEPLSLRPAKQL--ITEEKMAAHLNGLHISTEYTSHSLASEDMMDVGMDSPVPSTS 279
Q PPA+ + + Q+ IT + N L +SL + PVPS
Sbjct: 222 QPPPAKKPAAQQNPQMNRITNNLSSMLTNALKAQVSKAQNSLNNSSPTSTAPKKPVPSLM 281
Query: 280 TANIP 294
+ NIP
Sbjct: 282 SINIP 286
>AF098501-1|AAC67404.2| 548|Caenorhabditis elegans Hypothetical
protein H28G03.2a protein.
Length = 548
Score = 27.1 bits (57), Expect = 8.0
Identities = 18/65 (27%), Positives = 26/65 (40%), Gaps = 2/65 (3%)
Frame = +1
Query: 106 QAPPAEPLSLRPAKQL--ITEEKMAAHLNGLHISTEYTSHSLASEDMMDVGMDSPVPSTS 279
Q PPA+ + + Q+ IT + N L +SL + PVPS
Sbjct: 472 QPPPAKKPAAQQNPQMNRITNNLSSMLTNALKAQVSKAQNSLNNSSPTSTAPKKPVPSLM 531
Query: 280 TANIP 294
+ NIP
Sbjct: 532 SINIP 536
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,708,979
Number of Sequences: 27780
Number of extensions: 243786
Number of successful extensions: 770
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 733
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 770
length of database: 12,740,198
effective HSP length: 77
effective length of database: 10,601,138
effective search space used: 996506972
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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