Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= epV30514
         (516 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Y13429-1|CAA73841.1|  402|Apis mellifera dopamine receptor, D1 p...    26   0.20 
AF388659-3|AAK71993.1|  548|Apis mellifera 1D-myo-inositol-trisp...    25   0.35 
AF388659-2|AAK71994.1|  463|Apis mellifera 1D-myo-inositol-trisp...    25   0.35 
AF388659-1|AAK71995.1|  782|Apis mellifera 1D-myo-inositol-trisp...    25   0.35 
DQ011228-1|AAY63897.1|  486|Apis mellifera Amt-2-like protein pr...    23   1.9  
DQ384990-1|ABD51778.1|   92|Apis mellifera allergen Api m 6 vari...    22   3.3  
DQ384991-1|ABD51779.1|   94|Apis mellifera allergen Api m 6 vari...    22   4.3  
AY569781-1|AAS75781.1|  461|Apis mellifera neuronal nicotinic ac...    21   7.5  
DQ435330-1|ABD92645.1|  132|Apis mellifera OBP13 protein.              21   10.0 

>Y13429-1|CAA73841.1|  402|Apis mellifera dopamine receptor, D1
           protein.
          Length = 402

 Score = 26.2 bits (55), Expect = 0.20
 Identities = 12/28 (42%), Positives = 18/28 (64%)
 Frame = -2

Query: 398 FSNLSISEAGIMGSVLIFLTSSDKIIVC 315
           FS LS+   G +  +LIFL+ +  I+VC
Sbjct: 20  FSLLSVLLVGFLFLILIFLSVAGNILVC 47


>AF388659-3|AAK71993.1|  548|Apis mellifera
           1D-myo-inositol-trisphosphate 3-kinaseisoform C protein.
          Length = 548

 Score = 25.4 bits (53), Expect = 0.35
 Identities = 14/41 (34%), Positives = 22/41 (53%)
 Frame = -3

Query: 268 VQGCPYLHPSYLRRLESVMYTLLIYGVRLDARPFFLQLSIV 146
           V+G P+  P Y++RL+++  T       L A PFF    +V
Sbjct: 447 VEGYPHAVPKYIQRLKAIRAT-------LKASPFFASHEVV 480


>AF388659-2|AAK71994.1|  463|Apis mellifera
           1D-myo-inositol-trisphosphate 3-kinaseisoform B protein.
          Length = 463

 Score = 25.4 bits (53), Expect = 0.35
 Identities = 14/41 (34%), Positives = 22/41 (53%)
 Frame = -3

Query: 268 VQGCPYLHPSYLRRLESVMYTLLIYGVRLDARPFFLQLSIV 146
           V+G P+  P Y++RL+++  T       L A PFF    +V
Sbjct: 362 VEGYPHAVPKYIQRLKAIRAT-------LKASPFFASHEVV 395


>AF388659-1|AAK71995.1|  782|Apis mellifera
           1D-myo-inositol-trisphosphate 3-kinaseisoform A protein.
          Length = 782

 Score = 25.4 bits (53), Expect = 0.35
 Identities = 14/41 (34%), Positives = 22/41 (53%)
 Frame = -3

Query: 268 VQGCPYLHPSYLRRLESVMYTLLIYGVRLDARPFFLQLSIV 146
           V+G P+  P Y++RL+++  T       L A PFF    +V
Sbjct: 681 VEGYPHAVPKYIQRLKAIRAT-------LKASPFFASHEVV 714


>DQ011228-1|AAY63897.1|  486|Apis mellifera Amt-2-like protein
           protein.
          Length = 486

 Score = 23.0 bits (47), Expect = 1.9
 Identities = 9/20 (45%), Positives = 14/20 (70%)
 Frame = +3

Query: 273 NLHCQHTYEREIKRTHNNFI 332
           N+  +H +E +IKR HN F+
Sbjct: 261 NIQLEH-FEMKIKRKHNVFV 279


>DQ384990-1|ABD51778.1|   92|Apis mellifera allergen Api m 6 variant
           1 precursor protein.
          Length = 92

 Score = 22.2 bits (45), Expect = 3.3
 Identities = 10/29 (34%), Positives = 14/29 (48%)
 Frame = -2

Query: 197 IWSPFRCAAIFSSVINCFAGLRDSGSAGG 111
           + + F   AIFS ++  F G    G  GG
Sbjct: 5   VLASFLLLAIFSMLVGGFGGFGGFGGLGG 33


>DQ384991-1|ABD51779.1|   94|Apis mellifera allergen Api m 6 variant
           2 precursor protein.
          Length = 94

 Score = 21.8 bits (44), Expect = 4.3
 Identities = 9/29 (31%), Positives = 14/29 (48%)
 Frame = -2

Query: 197 IWSPFRCAAIFSSVINCFAGLRDSGSAGG 111
           + + F   A+FS ++  F G    G  GG
Sbjct: 5   VLASFLLLAVFSMLVGGFGGFGGFGGLGG 33


>AY569781-1|AAS75781.1|  461|Apis mellifera neuronal nicotinic
           acetylcholine Apisa7-2 subunit protein.
          Length = 461

 Score = 21.0 bits (42), Expect = 7.5
 Identities = 8/23 (34%), Positives = 13/23 (56%)
 Frame = -3

Query: 211 YTLLIYGVRLDARPFFLQLSIVL 143
           Y  + Y +RL  RP F   +++L
Sbjct: 200 YPDITYEIRLRRRPMFYVFNLIL 222


>DQ435330-1|ABD92645.1|  132|Apis mellifera OBP13 protein.
          Length = 132

 Score = 20.6 bits (41), Expect = 10.0
 Identities = 12/44 (27%), Positives = 18/44 (40%)
 Frame = -2

Query: 329 KIIVCPFNLSLIGMLAVEVEGTGLSIPTSIISSEARECDVYSVD 198
           K I+  F   L+G+LAV  E          + +E    D+   D
Sbjct: 2   KTIIFIFAFCLVGILAVSEESINKLRKIESVCAEENGIDLKKAD 45


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 141,729
Number of Sequences: 438
Number of extensions: 3043
Number of successful extensions: 9
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 146,343
effective HSP length: 54
effective length of database: 122,691
effective search space used: 14354847
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)