Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= epV30513
         (516 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY121665-1|AAM51992.1|  709|Drosophila melanogaster RE10861p pro...    99   4e-21
AE014296-2303|AAF49800.1|  709|Drosophila melanogaster CG10710-P...    99   4e-21

>AY121665-1|AAM51992.1|  709|Drosophila melanogaster RE10861p
           protein.
          Length = 709

 Score = 98.7 bits (235), Expect = 4e-21
 Identities = 45/62 (72%), Positives = 54/62 (87%), Gaps = 1/62 (1%)
 Frame = +2

Query: 260 LEQTFKEKGFLIQTQQLQSAEGATYCKFRQLRKFTRYLFRSWKDYLP-GELEEKTTENKE 436
           LE+TFKEKGFLIQTQQLQSAEGATYCKFRQL+KFTRYLFR+WKD++P  +L +    ++E
Sbjct: 635 LEKTFKEKGFLIQTQQLQSAEGATYCKFRQLKKFTRYLFRNWKDHIPESDLAKHQNASRE 694

Query: 437 VR 442
            R
Sbjct: 695 DR 696



 Score = 66.1 bits (154), Expect = 3e-11
 Identities = 30/54 (55%), Positives = 39/54 (72%), Gaps = 1/54 (1%)
 Frame = +2

Query: 2   ICKFKFTGGSKPSLQEKKMLSVDSGGNFRYYS-XXXXXXXXYEYLQNNQARSQQ 160
           ICKFKFTGG+KP+LQEKKMLSVD+ GN+RYY+         YE++  +Q +  Q
Sbjct: 484 ICKFKFTGGAKPTLQEKKMLSVDAEGNYRYYNGTGDKTMRGYEFISRDQQQQLQ 537


>AE014296-2303|AAF49800.1|  709|Drosophila melanogaster CG10710-PA
           protein.
          Length = 709

 Score = 98.7 bits (235), Expect = 4e-21
 Identities = 45/62 (72%), Positives = 54/62 (87%), Gaps = 1/62 (1%)
 Frame = +2

Query: 260 LEQTFKEKGFLIQTQQLQSAEGATYCKFRQLRKFTRYLFRSWKDYLP-GELEEKTTENKE 436
           LE+TFKEKGFLIQTQQLQSAEGATYCKFRQL+KFTRYLFR+WKD++P  +L +    ++E
Sbjct: 635 LEKTFKEKGFLIQTQQLQSAEGATYCKFRQLKKFTRYLFRNWKDHIPESDLAKHQNASRE 694

Query: 437 VR 442
            R
Sbjct: 695 DR 696



 Score = 66.1 bits (154), Expect = 3e-11
 Identities = 30/54 (55%), Positives = 39/54 (72%), Gaps = 1/54 (1%)
 Frame = +2

Query: 2   ICKFKFTGGSKPSLQEKKMLSVDSGGNFRYYS-XXXXXXXXYEYLQNNQARSQQ 160
           ICKFKFTGG+KP+LQEKKMLSVD+ GN+RYY+         YE++  +Q +  Q
Sbjct: 484 ICKFKFTGGAKPTLQEKKMLSVDAEGNYRYYNGTGDKTMRGYEFISRDQQQQLQ 537


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,422,375
Number of Sequences: 53049
Number of extensions: 349130
Number of successful extensions: 999
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 966
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 999
length of database: 24,988,368
effective HSP length: 80
effective length of database: 20,744,448
effective search space used: 1887744768
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)