Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= epV30513
         (516 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY921573-1|AAX62923.1|  694|Apis mellifera D2-like dopamine rece...    22   4.3  
DQ288391-1|ABC41341.1|  630|Apis mellifera vasa protein protein.       21   7.5  
DQ244074-1|ABB36784.1|  517|Apis mellifera cytochrome P450 monoo...    21   7.5  
AB204558-1|BAD89803.1| 1143|Apis mellifera nitric oxide synthase...    21   7.5  
AB231585-1|BAE17127.1|  898|Apis mellifera Mahya protein.              21   10.0 

>AY921573-1|AAX62923.1|  694|Apis mellifera D2-like dopamine
           receptor protein.
          Length = 694

 Score = 21.8 bits (44), Expect = 4.3
 Identities = 9/17 (52%), Positives = 12/17 (70%)
 Frame = -2

Query: 434 LYSRLSFLPIPRANSPS 384
           L S +S LP+P A +PS
Sbjct: 556 LKSTVSLLPLPLARTPS 572


>DQ288391-1|ABC41341.1|  630|Apis mellifera vasa protein protein.
          Length = 630

 Score = 21.0 bits (42), Expect = 7.5
 Identities = 8/15 (53%), Positives = 9/15 (60%)
 Frame = +3

Query: 336 VNFDNYGNSQGTYSG 380
           +NFD Y N Q   SG
Sbjct: 174 INFDKYDNIQVNVSG 188


>DQ244074-1|ABB36784.1|  517|Apis mellifera cytochrome P450
           monooxygenase protein.
          Length = 517

 Score = 21.0 bits (42), Expect = 7.5
 Identities = 7/9 (77%), Positives = 7/9 (77%)
 Frame = +3

Query: 378 GVGRTICPG 404
           G GR ICPG
Sbjct: 460 GAGRRICPG 468


>AB204558-1|BAD89803.1| 1143|Apis mellifera nitric oxide synthase
           protein.
          Length = 1143

 Score = 21.0 bits (42), Expect = 7.5
 Identities = 9/21 (42%), Positives = 10/21 (47%)
 Frame = +3

Query: 387 RTICPGNWKKRQPRIKRSGTP 449
           R  CP +W    P I  S TP
Sbjct: 380 RNGCPADWLWIVPPISGSATP 400


>AB231585-1|BAE17127.1|  898|Apis mellifera Mahya protein.
          Length = 898

 Score = 20.6 bits (41), Expect = 10.0
 Identities = 6/14 (42%), Positives = 11/14 (78%)
 Frame = -1

Query: 330 VAPSADCSCCVCMR 289
           ++P++  + CVCMR
Sbjct: 95  LSPNSTIAVCVCMR 108


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 119,872
Number of Sequences: 438
Number of extensions: 2348
Number of successful extensions: 5
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5
length of database: 146,343
effective HSP length: 54
effective length of database: 122,691
effective search space used: 14354847
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)