Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= epV30509
(516 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPACUNK4.14 |mdb1||BRCT domain protein|Schizosaccharomyces pombe... 38 9e-04
SPAC140.02 |gar2||GAR family|Schizosaccharomyces pombe|chr 1|||M... 38 0.001
SPAC29E6.03c |uso1|SPAC30.07c|ER to Golgi tethering factor Uso1 ... 35 0.008
SPBC1711.05 |||nucleocytoplasmic transport chaperone Srp40 |Schi... 32 0.044
SPCC777.15 |||tRNA dihydrouridine synthase Dus4 |Schizosaccharom... 28 0.72
SPAC630.13c |tsc2||tuberin|Schizosaccharomyces pombe|chr 1|||Manual 28 0.72
SPBC25B2.01 ||SPBC2G5.08|elongation factor 1 alpha related prote... 28 0.95
SPBC1861.01c |cnp3|SPBC56F2.13|CENP-C|Schizosaccharomyces pombe|... 27 1.7
SPAC29E6.10c ||SPAC30.14c|kinetochore protein |Schizosaccharomyc... 27 1.7
SPAC6G9.15c |||sequence orphan|Schizosaccharomyces pombe|chr 1||... 27 1.7
SPAC9.03c |brr2|spp41|U5 snRNP complex subunit Brr2 |Schizosacch... 27 1.7
SPBC1709.15c |cft2||cleavage factor two Cft2/polyadenylation fac... 27 1.7
SPAC22F3.06c |lon1||Lon protease homolog Lon1|Schizosaccharomyce... 27 2.2
SPAC1F5.04c |cdc12||formin Cdc12|Schizosaccharomyces pombe|chr 1... 27 2.2
SPAC57A10.10c |sla1||La protein homolog|Schizosaccharomyces pomb... 26 2.9
SPAC13C5.03 |tht1||nuclear membrane protein involved in karyogam... 26 2.9
SPAC23C4.02 |crn1||actin binding protein, coronin Crn1|Schizosac... 26 2.9
SPBC31E1.06 |bms1|SPBC800.01|GTP binding protein Bms1|Schizosacc... 26 2.9
SPBC29A10.12 |||HMG-box variant|Schizosaccharomyces pombe|chr 2|... 26 2.9
SPAC1952.05 |gcn5||histone acetyltransferase Gcn5|Schizosaccharo... 26 3.8
SPBC36B7.08c |||nucleosome assembly protein |Schizosaccharomyces... 26 3.8
SPBC1718.02 |hop1||linear element associated protein Hop1|Schizo... 26 3.8
SPCC18B5.01c |bfr1|hba2, SPCPJ732.04c|brefeldin A efflux transpo... 25 5.1
SPAC890.05 |||ribosome biogenesis protein|Schizosaccharomyces po... 25 5.1
SPBC106.09 |cut4|apc1|anaphase-promoting complex subunit Apc1|Sc... 25 6.7
SPAC8C9.04 |||sequence orphan|Schizosaccharomyces pombe|chr 1|||... 25 6.7
SPBC1683.12 |||nicotinic acid plasma membrane transporter |Schiz... 25 6.7
SPCC1902.01 |gaf1|SPCC417.01c|transcription factor Gaf1 |Schizos... 25 6.7
SPAC1486.04c |alm1||medial ring protein Alm1|Schizosaccharomyces... 25 6.7
SPAC23H4.01c ||SPAP27G11.01|sterol binding ankyrin repeat protei... 25 6.7
SPBC1734.10c |||mRNA processing protein |Schizosaccharomyces pom... 25 6.7
SPBC11C11.08 |srp1||SR family protein Srp1|Schizosaccharomyces p... 25 6.7
SPAC2E1P5.02c |mug109||sequence orphan|Schizosaccharomyces pombe... 25 6.7
SPAC24C9.15c |spn5|mde9, meu28|septin Spn5|Schizosaccharomyces p... 22 8.6
SPBC16A3.13 |meu7|aah4|alpha-amylase homolog Aah4|Schizosaccharo... 25 8.9
SPBC428.10 |||sequence orphan|Schizosaccharomyces pombe|chr 2|||... 25 8.9
SPAC23G3.06 |||U3 snoRNP protein Nop58 |Schizosaccharomyces pomb... 25 8.9
SPBC12C2.10c |pst1|SPBC21D10.01c|Clr6 histone deacetylase comple... 25 8.9
>SPACUNK4.14 |mdb1||BRCT domain protein|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 520
Score = 37.9 bits (84), Expect = 9e-04
Identities = 19/63 (30%), Positives = 38/63 (60%)
Frame = +2
Query: 137 KKTAQIVVEDKKDISSTVNINNAIEKNNSDSNKVVNGDRDRESSPSEDGDEKKRDAEVVF 316
K++A+I +KD++ NI+++ KNNS + VN + + +PS + +E KR A +
Sbjct: 172 KQSAEINSPIEKDVNPQQNISDSSIKNNSIHSDEVNPEVRPDLTPSNENEESKRSAPEIA 231
Query: 317 IQD 325
+++
Sbjct: 232 LKE 234
>SPAC140.02 |gar2||GAR family|Schizosaccharomyces pombe|chr
1|||Manual
Length = 500
Score = 37.5 bits (83), Expect = 0.001
Identities = 30/104 (28%), Positives = 54/104 (51%), Gaps = 3/104 (2%)
Frame = +2
Query: 5 TKSTMSEEDLKTVIVTKCPNKTAVMDKKKEHKKNRSLEKCNDAEKKTAQIVVEDKKDISS 184
+ S+ SEE+ + V+ + K + D E + S + + +E + + VVE ++
Sbjct: 141 SSSSESEEEEEAVVKIE-EKKESSSDSSSESSSSESESESSSSESEEEEEVVEKTEEKKE 199
Query: 185 TVNINNAIEKNNSDSNKVVNGDRDRES-SPSEDG--DEKKRDAE 307
+ +++ +++SDS+ +GD D S S SE DEKKR AE
Sbjct: 200 GSSESSSDSESSSDSSSE-SGDSDSSSDSESESSSEDEKKRKAE 242
>SPAC29E6.03c |uso1|SPAC30.07c|ER to Golgi tethering factor Uso1
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1044
Score = 34.7 bits (76), Expect = 0.008
Identities = 24/78 (30%), Positives = 43/78 (55%), Gaps = 4/78 (5%)
Frame = +2
Query: 89 KEH-KKNRSLEKCNDAEKKTAQIVVEDKKDISSTVNINNAIEKNNSDSNKVVNGDRDRES 265
KEH +K SLEK +A KTA + ++ K + S + ++ ++ + K VN ++ +E
Sbjct: 879 KEHTEKISSLEKDLEAATKTASTLSKELKTVKSENDSLKSVSNDDQNKEKSVNNEKFKEV 938
Query: 266 SPS-EDGDEK--KRDAEV 310
S + + +EK RD E+
Sbjct: 939 SQALAEANEKLNARDEEI 956
>SPBC1711.05 |||nucleocytoplasmic transport chaperone Srp40
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 451
Score = 32.3 bits (70), Expect = 0.044
Identities = 21/75 (28%), Positives = 40/75 (53%), Gaps = 3/75 (4%)
Frame = +2
Query: 92 EHKKNR-SLEKCNDAEKKTAQIVVEDKKDISST--VNINNAIEKNNSDSNKVVNGDRDRE 262
+HKK + SLEK ND +K ++ +K SS+ ++ ++++S S++ + D +
Sbjct: 68 KHKKTKESLEKSNDDSQKISKKGAPPEKAHSSSEASGSGSSSDESDSSSSESESSSEDND 127
Query: 263 SSPSEDGDEKKRDAE 307
SS S E + +E
Sbjct: 128 SSSSSSDSESESSSE 142
Score = 26.6 bits (56), Expect = 2.2
Identities = 16/76 (21%), Positives = 30/76 (39%)
Frame = +2
Query: 80 DKKKEHKKNRSLEKCNDAEKKTAQIVVEDKKDISSTVNINNAIEKNNSDSNKVVNGDRDR 259
+ + + N S +D+E +++ ED SS+ + + SDS+ +
Sbjct: 118 ESESSSEDNDSSSSSSDSESESSS---EDSDSSSSSSDSESESSSEGSDSSSSSSSSESE 174
Query: 260 ESSPSEDGDEKKRDAE 307
SS D D+E
Sbjct: 175 SSSEDNDSSSSSSDSE 190
Score = 26.6 bits (56), Expect = 2.2
Identities = 16/76 (21%), Positives = 30/76 (39%)
Frame = +2
Query: 80 DKKKEHKKNRSLEKCNDAEKKTAQIVVEDKKDISSTVNINNAIEKNNSDSNKVVNGDRDR 259
+ + + N S +D+E +++ ED SS+ + + SDS+ +
Sbjct: 172 ESESSSEDNDSSSSSSDSESESSS---EDSDSSSSSSDSESESSSEGSDSSSSSSSSESE 228
Query: 260 ESSPSEDGDEKKRDAE 307
SS D D+E
Sbjct: 229 SSSEDNDSSSSSSDSE 244
Score = 25.0 bits (52), Expect = 6.7
Identities = 15/99 (15%), Positives = 37/99 (37%)
Frame = +2
Query: 11 STMSEEDLKTVIVTKCPNKTAVMDKKKEHKKNRSLEKCNDAEKKTAQIVVEDKKDISSTV 190
S+ S D ++ ++ + ++ + + + + + ++ ED SS+
Sbjct: 182 SSSSSSDSESESSSEDSDSSSSSSDSESESSSEGSDSSSSSSSSESESSSEDNDSSSSSS 241
Query: 191 NINNAIEKNNSDSNKVVNGDRDRESSPSEDGDEKKRDAE 307
+ + +SDS+ + SS D D+E
Sbjct: 242 DSESESSSEDSDSSSSSSDSESESSSKDSDSSSNSSDSE 280
>SPCC777.15 |||tRNA dihydrouridine synthase Dus4
|Schizosaccharomyces pombe|chr 3|||Manual
Length = 326
Score = 28.3 bits (60), Expect = 0.72
Identities = 21/70 (30%), Positives = 37/70 (52%), Gaps = 2/70 (2%)
Frame = +2
Query: 68 TAVMDK-KKEHKKNRSLEKCNDAEKKTAQIVVEDKKDISSTVNINNAIEKNNSDSNKVVN 244
+A++D+ +K HK R++ K E ++ + KD++ T ++ IEK+ +D V
Sbjct: 120 SALLDEPEKVHKLVRAV-KSTLGESFCTEVKIRIAKDLNKTRHLMQVIEKSGADIITVHG 178
Query: 245 GDR-DRESSP 271
R DR S P
Sbjct: 179 RTRQDRSSFP 188
>SPAC630.13c |tsc2||tuberin|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1339
Score = 28.3 bits (60), Expect = 0.72
Identities = 16/41 (39%), Positives = 19/41 (46%)
Frame = -2
Query: 263 TPYLYRH*PLYLNRYYFFLWHYLY*QLN*CLFYPPLRFEQS 141
T YL+ P LNR F WH + L C Y PL+ S
Sbjct: 343 TVYLFLRTPSILNRLNFLDWHRILNILMYCSQYLPLKASTS 383
>SPBC25B2.01 ||SPBC2G5.08|elongation factor 1 alpha related
protein|Schizosaccharomyces pombe|chr 2|||Manual
Length = 592
Score = 27.9 bits (59), Expect = 0.95
Identities = 22/73 (30%), Positives = 36/73 (49%)
Frame = +2
Query: 80 DKKKEHKKNRSLEKCNDAEKKTAQIVVEDKKDISSTVNINNAIEKNNSDSNKVVNGDRDR 259
D +KE K+N+S E DA+ D D SS N ++ KN+ + + + +
Sbjct: 90 DSQKEKKQNKSKEALADAK---------DPLDESSNGIKNLSLNKNDEPAFQTNGEVKMK 140
Query: 260 ESSPSEDGDEKKR 298
SS S++ EKK+
Sbjct: 141 NSSESDNQPEKKK 153
>SPBC1861.01c |cnp3|SPBC56F2.13|CENP-C|Schizosaccharomyces pombe|chr
2|||Manual
Length = 643
Score = 27.1 bits (57), Expect = 1.7
Identities = 38/169 (22%), Positives = 75/169 (44%), Gaps = 8/169 (4%)
Frame = +2
Query: 29 DLKTVIVTKCPNKTAVMDKKKEHKKNRSLEKCNDAEKKTAQIVVED---KKDISSTVNIN 199
++K +I P+ + +KK H K +E ++ E K+ + D K +I+ V
Sbjct: 450 EVKQIIRVDDPSPSIRQGRKKRHAKRSGVEIKSNLEAKSNDVEEYDAFYKDEINCEVLSW 509
Query: 200 NAIEKNNSDSNKVVNGDRDRESSPSEDGDEKKRDAEVVFIQDLGFTVKIVS-PGAEPLDI 376
N E+N S + V G + + +++ + A +F ++ F +V P +
Sbjct: 510 N--EQNPKASEERVVGYSLPSVNLQQISNQQLKFAS-LFKEEPSFAAGVVEMPAGAEKPV 566
Query: 377 QVSSMELVQEIHQVLMDR-EDTCHRTCFSLQLDGVTL---DNFAELKNI 511
+ S ++ +L + E T + T F ++ DGV + N+ +KNI
Sbjct: 567 KPSKHNIMS--FCILQGKIEVTVNATTFRMKKDGVFIVPRGNYYSIKNI 613
>SPAC29E6.10c ||SPAC30.14c|kinetochore protein |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1085
Score = 27.1 bits (57), Expect = 1.7
Identities = 19/78 (24%), Positives = 36/78 (46%)
Frame = +2
Query: 68 TAVMDKKKEHKKNRSLEKCNDAEKKTAQIVVEDKKDISSTVNINNAIEKNNSDSNKVVNG 247
++ K+K+ KK +S K N +A + V+D++D + + AI N + NG
Sbjct: 179 SSTSSKRKKKKKKKS--KAN-----SASLNVDDQRDFEQVYSTDVAITYRNGQALSYYNG 231
Query: 248 DRDRESSPSEDGDEKKRD 301
+ S + + K +D
Sbjct: 232 SVRQASMNNNVNNNKSKD 249
>SPAC6G9.15c |||sequence orphan|Schizosaccharomyces pombe|chr
1|||Manual
Length = 498
Score = 27.1 bits (57), Expect = 1.7
Identities = 23/80 (28%), Positives = 36/80 (45%), Gaps = 3/80 (3%)
Frame = +2
Query: 140 KTAQIVVED---KKDISSTVNINNAIEKNNSDSNKVVNGDRDRESSPSEDGDEKKRDAEV 310
K+++ +VED K S+ +INN + NS+++ V NG S KR A V
Sbjct: 161 KSSKNLVEDAHKSKKASTNSSINNMVSTVNSENSNVNNG----SSLNGNTSSNLKRKANV 216
Query: 311 VFIQDLGFTVKIVSPGAEPL 370
VK +P ++ L
Sbjct: 217 TLGDYKRLKVKNKNPSSQEL 236
>SPAC9.03c |brr2|spp41|U5 snRNP complex subunit Brr2
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 2176
Score = 27.1 bits (57), Expect = 1.7
Identities = 23/71 (32%), Positives = 31/71 (43%), Gaps = 1/71 (1%)
Frame = +2
Query: 227 SNKVVNGDRDRESS-PSEDGDEKKRDAEVVFIQDLGFTVKIVSPGAEPLDIQVSSMELVQ 403
SN V DR S +E E + V I D+G +I P PL EL Q
Sbjct: 36 SNLVTQADRRFVSRRDAEPTGEPESLVNRVSIADMGSRARIEKPSTLPL-------ELTQ 88
Query: 404 EIHQVLMDRED 436
E+ +V + R+D
Sbjct: 89 EVQEVRLPRKD 99
>SPBC1709.15c |cft2||cleavage factor two Cft2/polyadenylation factor
CPSF-73 |Schizosaccharomyces pombe|chr 2|||Manual
Length = 797
Score = 27.1 bits (57), Expect = 1.7
Identities = 15/47 (31%), Positives = 26/47 (55%), Gaps = 1/47 (2%)
Frame = +2
Query: 170 KDISSTVNINNAIE-KNNSDSNKVVNGDRDRESSPSEDGDEKKRDAE 307
+D S N +E +N+SD N + N + R+ S DG ++K++ E
Sbjct: 504 QDFSMINEPANTLELENDSDDNALSNSNGKRKWSEINDGLQQKKEEE 550
>SPAC22F3.06c |lon1||Lon protease homolog Lon1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1067
Score = 26.6 bits (56), Expect = 2.2
Identities = 16/72 (22%), Positives = 32/72 (44%)
Frame = +2
Query: 59 PNKTAVMDKKKEHKKNRSLEKCNDAEKKTAQIVVEDKKDISSTVNINNAIEKNNSDSNKV 238
P TAV+ + + + DA+ + E + D SS ++ N ++ + N
Sbjct: 244 PALTAVLYPHRRIRITELIPPKEDADSAASSDAAELETDKSSNLSSNGEVKSDLKQDNGK 303
Query: 239 VNGDRDRESSPS 274
+++ ES+PS
Sbjct: 304 EEPEKEVESTPS 315
>SPAC1F5.04c |cdc12||formin Cdc12|Schizosaccharomyces pombe|chr
1|||Manual
Length = 1841
Score = 26.6 bits (56), Expect = 2.2
Identities = 20/101 (19%), Positives = 42/101 (41%)
Frame = +2
Query: 5 TKSTMSEEDLKTVIVTKCPNKTAVMDKKKEHKKNRSLEKCNDAEKKTAQIVVEDKKDISS 184
++ST D + TK ++ K ++K RS + +D+ + K S+
Sbjct: 1483 SESTDGLSDALNITPTKKGEVSSKAKKGYNYEKRRSGRQVSDSYVLNKNSKNKSNKGRSA 1542
Query: 185 TVNINNAIEKNNSDSNKVVNGDRDRESSPSEDGDEKKRDAE 307
+ ++ +S+ K NG++ R S + RD++
Sbjct: 1543 SYTFSDPSSLEDSNRQKPFNGEKFRRFSSKSRRGSQNRDSK 1583
>SPAC57A10.10c |sla1||La protein homolog|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 298
Score = 26.2 bits (55), Expect = 2.9
Identities = 18/60 (30%), Positives = 30/60 (50%), Gaps = 3/60 (5%)
Frame = +2
Query: 80 DKKKEHKKNRSLEKCNDAEKKTAQI---VVEDKKDISSTVNINNAIEKNNSDSNKVVNGD 250
+++KE K+ S ++ N +E A+ VVE +KD +S EK D K ++ D
Sbjct: 4 EEQKEEIKDISSKQENSSEVPKAEEAGKVVESQKDTTSEEKKEETTEKKEDDGKKDLSFD 63
Score = 26.2 bits (55), Expect = 2.9
Identities = 17/48 (35%), Positives = 25/48 (52%), Gaps = 1/48 (2%)
Frame = +2
Query: 161 EDKKDISSTVNINNAIEKNNSDSNKVVNGDRDRES-SPSEDGDEKKRD 301
E+ KDISS ++ + K ++ KVV +D S E+ EKK D
Sbjct: 8 EEIKDISSKQENSSEVPK-AEEAGKVVESQKDTTSEEKKEETTEKKED 54
>SPAC13C5.03 |tht1||nuclear membrane protein involved in karyogamy
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 543
Score = 26.2 bits (55), Expect = 2.9
Identities = 12/34 (35%), Positives = 21/34 (61%), Gaps = 3/34 (8%)
Frame = -3
Query: 169 FILHYDLSSLLFSVIALFQRPVLL---VFFLFVH 77
F L LSSL F V+ + +RP+++ + +F+H
Sbjct: 380 FTLFATLSSLFFKVLKIHRRPIIVFGSLSIIFIH 413
>SPAC23C4.02 |crn1||actin binding protein, coronin
Crn1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 601
Score = 26.2 bits (55), Expect = 2.9
Identities = 17/50 (34%), Positives = 26/50 (52%)
Frame = +2
Query: 47 VTKCPNKTAVMDKKKEHKKNRSLEKCNDAEKKTAQIVVEDKKDISSTVNI 196
V K P++ ++ E K L + E+K V +DKKDIS+ VN+
Sbjct: 509 VKKEPSEEKKLEVSDEAPKAAPLAESKKVEEKEPFYVSKDKKDISA-VNL 557
>SPBC31E1.06 |bms1|SPBC800.01|GTP binding protein
Bms1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1121
Score = 26.2 bits (55), Expect = 2.9
Identities = 18/58 (31%), Positives = 27/58 (46%), Gaps = 1/58 (1%)
Frame = +2
Query: 83 KKKEHKKNRSLEKCNDAEKKTAQIVVEDKKDISSTVNIN-NAIEKNNSDSNKVVNGDR 253
KK+E + E D EKK E+K+ I+ + IN A E + +S + G R
Sbjct: 664 KKEELRLRFEEEDRGDPEKKDVDWYTEEKEKIARQLVINREAFEDMDPESRAEIEGYR 721
>SPBC29A10.12 |||HMG-box variant|Schizosaccharomyces pombe|chr
2|||Manual
Length = 207
Score = 26.2 bits (55), Expect = 2.9
Identities = 14/47 (29%), Positives = 23/47 (48%)
Frame = +2
Query: 86 KKEHKKNRSLEKCNDAEKKTAQIVVEDKKDISSTVNINNAIEKNNSD 226
KK KKN SL+ + +TA + D +++NN+ K+ D
Sbjct: 80 KKAAKKNSSLDAFLNETPQTASYSARNIDDALDLLSLNNSSSKDKID 126
>SPAC1952.05 |gcn5||histone acetyltransferase
Gcn5|Schizosaccharomyces pombe|chr 1|||Manual
Length = 454
Score = 25.8 bits (54), Expect = 3.8
Identities = 12/36 (33%), Positives = 19/36 (52%)
Frame = +2
Query: 167 KKDISSTVNINNAIEKNNSDSNKVVNGDRDRESSPS 274
K+D S N+ AI ++ + V ++D ESS S
Sbjct: 38 KQDEQSNPNVREAIANSDGQESLAVKENKDTESSSS 73
>SPBC36B7.08c |||nucleosome assembly protein |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 244
Score = 25.8 bits (54), Expect = 3.8
Identities = 16/64 (25%), Positives = 32/64 (50%), Gaps = 2/64 (3%)
Frame = +2
Query: 116 EKCNDAEKKTAQIVVEDKKDISSTVNINNAIEKNNSDSNKVVNGDRDRESSPSED--GDE 289
E+ +D + T I + + ++ A+ + SD ++ V+ + D E ED GDE
Sbjct: 171 EEDDDFDGATLTIFLAEDLFPNAVKYFTEAMTEEASDEDESVDLEEDEEEEDEEDEEGDE 230
Query: 290 KKRD 301
+K++
Sbjct: 231 EKQE 234
>SPBC1718.02 |hop1||linear element associated protein
Hop1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 528
Score = 25.8 bits (54), Expect = 3.8
Identities = 19/81 (23%), Positives = 40/81 (49%)
Frame = +2
Query: 68 TAVMDKKKEHKKNRSLEKCNDAEKKTAQIVVEDKKDISSTVNINNAIEKNNSDSNKVVNG 247
T ++D++ +K+ S KC + ++ + + V +N ++KN S S+KV
Sbjct: 270 TQILDEQSV-EKSLSQGKCEKMQNESRGLREIKNNNPCEEVKKSNWLKKNISGSDKVDKA 328
Query: 248 DRDRESSPSEDGDEKKRDAEV 310
++ + E GD + D+E+
Sbjct: 329 EKKKALLNCECGDSTE-DSEM 348
>SPCC18B5.01c |bfr1|hba2, SPCPJ732.04c|brefeldin A efflux transporter
Bfr1|Schizosaccharomyces pombe|chr 3|||Manual
Length = 1530
Score = 25.4 bits (53), Expect = 5.1
Identities = 12/48 (25%), Positives = 26/48 (54%), Gaps = 3/48 (6%)
Frame = +2
Query: 215 NNSDSNKVVNGDRDRESSPSEDGDEKK---RDAEVVFIQDLGFTVKIV 349
NNS+ K ++ + D+ ++ + ++KK ++ + L F VK+V
Sbjct: 1159 NNSEERKAISAELDKINASFSNSEDKKTLSKEDRSTYAMPLWFQVKMV 1206
>SPAC890.05 |||ribosome biogenesis protein|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 284
Score = 25.4 bits (53), Expect = 5.1
Identities = 14/48 (29%), Positives = 23/48 (47%)
Frame = +2
Query: 47 VTKCPNKTAVMDKKKEHKKNRSLEKCNDAEKKTAQIVVEDKKDISSTV 190
+TK K K+ K R + EKK +I ++DK + +S+V
Sbjct: 195 ITKKKKKEHKKKDKESSSKKRKSGSSDKEEKKKKKIKLKDKPESTSSV 242
>SPBC106.09 |cut4|apc1|anaphase-promoting complex subunit
Apc1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1458
Score = 25.0 bits (52), Expect = 6.7
Identities = 9/25 (36%), Positives = 15/25 (60%)
Frame = +2
Query: 434 DTCHRTCFSLQLDGVTLDNFAELKN 508
D+CHR + ++ + N +ELKN
Sbjct: 929 DSCHRRMSEVTMEEILASNESELKN 953
>SPAC8C9.04 |||sequence orphan|Schizosaccharomyces pombe|chr
1|||Manual
Length = 647
Score = 25.0 bits (52), Expect = 6.7
Identities = 13/37 (35%), Positives = 22/37 (59%)
Frame = +2
Query: 158 VEDKKDISSTVNINNAIEKNNSDSNKVVNGDRDRESS 268
V++K D ST NA+E+NN+ S V D ++++
Sbjct: 22 VQEKLDSKST----NAVEQNNNSSQASVTKDNKKKAA 54
>SPBC1683.12 |||nicotinic acid plasma membrane transporter
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 482
Score = 25.0 bits (52), Expect = 6.7
Identities = 10/30 (33%), Positives = 15/30 (50%)
Frame = -2
Query: 152 FEQSSFQRHCTFPKTCSSCVLSFCPSRPFY 63
F+ + F++ PK SCV+ FC Y
Sbjct: 259 FDWTQFRKAFKDPKMYMSCVIQFCQDLVLY 288
>SPCC1902.01 |gaf1|SPCC417.01c|transcription factor Gaf1
|Schizosaccharomyces pombe|chr 3|||Manual
Length = 855
Score = 25.0 bits (52), Expect = 6.7
Identities = 14/41 (34%), Positives = 22/41 (53%)
Frame = +2
Query: 77 MDKKKEHKKNRSLEKCNDAEKKTAQIVVEDKKDISSTVNIN 199
+D KK+ + ++ K +AEK T EDKK ++T N
Sbjct: 589 LDTKKDRSVSFNINK--NAEKPTVSNAAEDKKGDANTRRAN 627
>SPAC1486.04c |alm1||medial ring protein Alm1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1727
Score = 25.0 bits (52), Expect = 6.7
Identities = 34/137 (24%), Positives = 68/137 (49%), Gaps = 2/137 (1%)
Frame = +2
Query: 110 SLEKCNDAEKK--TAQIVVEDKKDISSTVNINNAIEKNNSDSNKVVNGDRDRESSPSEDG 283
SLE+ N +++ + Q + + DI +T +EK +SNK +D E P+E+
Sbjct: 1444 SLEEFNSTKEELSSTQRKLSEIMDILNTTK--EELEKVRQNSNKSEGTSKDTE-IPNEEE 1500
Query: 284 DEKKRDAEVVFIQDLGFTVKIVSPGAEPLDIQVSSMELVQEIHQVLMDREDTCHRTCFSL 463
E+K+ V Q++ +++ S A+ ++ EL+++ +QVL D+ T S
Sbjct: 1501 MERKK----VMQQEV---LRLRSRIAK----ELQKNELLRKQNQVLQDQVKALQETVVSS 1549
Query: 464 QLDGVTLDNFAELKNIE 514
+ + + A+ K++E
Sbjct: 1550 E-EAESASVHADTKDLE 1565
>SPAC23H4.01c ||SPAP27G11.01|sterol binding ankyrin repeat
protein|Schizosaccharomyces pombe|chr 1|||Manual
Length = 945
Score = 25.0 bits (52), Expect = 6.7
Identities = 20/68 (29%), Positives = 34/68 (50%), Gaps = 2/68 (2%)
Frame = +2
Query: 200 NAIEK--NNSDSNKVVNGDRDRESSPSEDGDEKKRDAEVVFIQDLGFTVKIVSPGAEPLD 373
NA+EK N+ S+K+V +R +ESS ++ R E + I L T +I S +
Sbjct: 236 NALEKAKNSQTSSKLVVDERTQESSSNQLVSIYSRLRECLDIAQLYRTSRIKSASSHNFS 295
Query: 374 IQVSSMEL 397
+ ++L
Sbjct: 296 VPEIRIQL 303
>SPBC1734.10c |||mRNA processing protein |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 332
Score = 25.0 bits (52), Expect = 6.7
Identities = 11/29 (37%), Positives = 15/29 (51%)
Frame = -3
Query: 91 FLFVHHGRFIWTFCYYNSFKIFFRHRRFS 5
F+ V R IWT+C+ I F+ FS
Sbjct: 226 FVIVDGERSIWTWCFVPHLPISFQKSPFS 254
>SPBC11C11.08 |srp1||SR family protein Srp1|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 275
Score = 25.0 bits (52), Expect = 6.7
Identities = 19/78 (24%), Positives = 43/78 (55%)
Frame = +2
Query: 80 DKKKEHKKNRSLEKCNDAEKKTAQIVVEDKKDISSTVNINNAIEKNNSDSNKVVNGDRDR 259
D++ + +RS + A +K+ VE++ + N++N K S+SN+ + ++
Sbjct: 160 DRRSPKRNHRSPSPVSFAPQKSP---VENETE----TNVDNGDTKI-SESNEKSGTEVEQ 211
Query: 260 ESSPSEDGDEKKRDAEVV 313
+S+P+ +G+E+ + E V
Sbjct: 212 QSAPNSNGNEEVNNLEPV 229
>SPAC2E1P5.02c |mug109||sequence orphan|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 163
Score = 25.0 bits (52), Expect = 6.7
Identities = 9/23 (39%), Positives = 12/23 (52%)
Frame = -3
Query: 103 LLVFFLFVHHGRFIWTFCYYNSF 35
L+V GR W+FC +SF
Sbjct: 124 LIVIMFLAPVGRLFWSFCIVSSF 146
>SPAC24C9.15c |spn5|mde9, meu28|septin Spn5|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 464
Score = 22.2 bits (45), Expect(2) = 8.6
Identities = 9/47 (19%), Positives = 22/47 (46%)
Frame = +2
Query: 152 IVVEDKKDISSTVNINNAIEKNNSDSNKVVNGDRDRESSPSEDGDEK 292
++V + + T +N+ ++ N+++ D + DGD+K
Sbjct: 121 LIVVGESSLGKTTFVNSFLQSNDTNFRPKKTMDFVEHKATLSDGDQK 167
Score = 20.6 bits (41), Expect(2) = 8.6
Identities = 7/18 (38%), Positives = 10/18 (55%)
Frame = +2
Query: 53 KCPNKTAVMDKKKEHKKN 106
+CP DKK E K++
Sbjct: 63 QCPQSDTAKDKKTEFKQD 80
>SPBC16A3.13 |meu7|aah4|alpha-amylase homolog
Aah4|Schizosaccharomyces pombe|chr 2|||Manual
Length = 774
Score = 24.6 bits (51), Expect = 8.9
Identities = 10/20 (50%), Positives = 14/20 (70%)
Frame = +2
Query: 314 FIQDLGFTVKIVSPGAEPLD 373
+I+DLGFT +SP E L+
Sbjct: 73 YIRDLGFTAISISPVVEQLE 92
>SPBC428.10 |||sequence orphan|Schizosaccharomyces pombe|chr
2|||Manual
Length = 751
Score = 24.6 bits (51), Expect = 8.9
Identities = 24/104 (23%), Positives = 44/104 (42%), Gaps = 3/104 (2%)
Frame = +2
Query: 68 TAVMDKKKEHKKNRSLEKCNDAEKKTAQ-IVVEDKKDISSTVNINNAIEKNNSDSNKVVN 244
T + D K + N E+ N + K + ++ T I + ++ + D + +V
Sbjct: 135 TGIQDSSK-YTVNGPTERDNKSMKSFVRSFFTSTDSSVADTTIIPSMTQQFDKDPSTLVQ 193
Query: 245 GDRDRESSPSEDGDEKK--RDAEVVFIQDLGFTVKIVSPGAEPL 370
D+E EDG +AE +Q++ T+K S G E +
Sbjct: 194 SSIDKEIQVKEDGTTSSVAVNAETA-VQNVNGTIK-ESQGTESI 235
>SPAC23G3.06 |||U3 snoRNP protein Nop58 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 508
Score = 24.6 bits (51), Expect = 8.9
Identities = 11/47 (23%), Positives = 22/47 (46%)
Frame = +2
Query: 155 VVEDKKDISSTVNINNAIEKNNSDSNKVVNGDRDRESSPSEDGDEKK 295
V +D ++ V ++ IEK S+K+ D + ++ +KK
Sbjct: 434 VTKDAEESQEDVEMDIVIEKKKKKSSKLKEADGESSKKEKKEKKDKK 480
>SPBC12C2.10c |pst1|SPBC21D10.01c|Clr6 histone deacetylase complex
subunit Pst1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1522
Score = 24.6 bits (51), Expect = 8.9
Identities = 12/34 (35%), Positives = 21/34 (61%), Gaps = 1/34 (2%)
Frame = +2
Query: 212 KNNSDS-NKVVNGDRDRESSPSEDGDEKKRDAEV 310
+NN DS NK+ ++++E ED +EK R+ +
Sbjct: 1403 RNNDDSSNKINLSEKEKEKESIED-EEKNREGSM 1435
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 1,967,951
Number of Sequences: 5004
Number of extensions: 38239
Number of successful extensions: 217
Number of sequences better than 10.0: 38
Number of HSP's better than 10.0 without gapping: 201
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 217
length of database: 2,362,478
effective HSP length: 68
effective length of database: 2,022,206
effective search space used: 208287218
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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