Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= epV30509
(516 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY569704-1|AAS86657.1| 426|Apis mellifera complementary sex det... 27 0.087
DQ325105-1|ABD14119.1| 180|Apis mellifera complementary sex det... 27 0.11
DQ325104-1|ABD14118.1| 180|Apis mellifera complementary sex det... 27 0.11
U26026-1|AAA69069.1| 377|Apis mellifera long-wavelength rhodops... 24 1.1
AJ780964-1|CAG62942.2| 332|Apis mellifera putative corticotropi... 24 1.1
AB207270-1|BAE72137.1| 429|Apis mellifera broad-complex protein. 24 1.1
AY703752-1|AAU12748.1| 152|Apis mellifera long-wavelength rhodo... 23 1.9
DQ855487-1|ABH88174.1| 125|Apis mellifera chemosensory protein ... 23 2.5
AJ973402-1|CAJ01449.1| 125|Apis mellifera hypothetical protein ... 23 2.5
AF469010-1|AAL93136.1| 678|Apis mellifera cGMP-dependent protei... 23 2.5
AF004169-1|AAC13418.1| 371|Apis mellifera ultraviolet-sensitive... 23 2.5
AF084556-1|AAC71015.1| 652|Apis mellifera pipsqueak protein. 22 3.3
DQ667184-1|ABG75736.1| 489|Apis mellifera GABA-gated ion channe... 22 4.3
AF274024-1|AAF90150.1| 232|Apis mellifera tetraspanin F139 prot... 21 10.0
>AY569704-1|AAS86657.1| 426|Apis mellifera complementary sex
determiner protein.
Length = 426
Score = 27.5 bits (58), Expect = 0.087
Identities = 23/84 (27%), Positives = 38/84 (45%), Gaps = 1/84 (1%)
Frame = +2
Query: 80 DKKKEHK-KNRSLEKCNDAEKKTAQIVVEDKKDISSTVNINNAIEKNNSDSNKVVNGDRD 256
D+ +E+K K+R EK ++ ++K + K+ S N+ KN + K R+
Sbjct: 240 DRNREYKEKDRRYEKLHNEKEKLLEERTSRKRYSRSREREQNSY-KNEREYRKY----RE 294
Query: 257 RESSPSEDGDEKKRDAEVVFIQDL 328
R S D E++R E I L
Sbjct: 295 RSKERSRDRTERERSREPKIISSL 318
>DQ325105-1|ABD14119.1| 180|Apis mellifera complementary sex
determiner protein.
Length = 180
Score = 27.1 bits (57), Expect = 0.11
Identities = 23/84 (27%), Positives = 38/84 (45%), Gaps = 1/84 (1%)
Frame = +2
Query: 80 DKKKEHK-KNRSLEKCNDAEKKTAQIVVEDKKDISSTVNINNAIEKNNSDSNKVVNGDRD 256
D+ +E+K K+R EK ++ ++K + K+ S N+ KN + K R+
Sbjct: 7 DRNREYKEKDRRYEKLHNEKEKLLEERTSRKRYSRSREREQNSY-KNEKEYRKY----RE 61
Query: 257 RESSPSEDGDEKKRDAEVVFIQDL 328
R S D E++R E I L
Sbjct: 62 RSKERSRDKRERERSKERKIISSL 85
>DQ325104-1|ABD14118.1| 180|Apis mellifera complementary sex
determiner protein.
Length = 180
Score = 27.1 bits (57), Expect = 0.11
Identities = 23/84 (27%), Positives = 38/84 (45%), Gaps = 1/84 (1%)
Frame = +2
Query: 80 DKKKEHK-KNRSLEKCNDAEKKTAQIVVEDKKDISSTVNINNAIEKNNSDSNKVVNGDRD 256
D+ +E+K K+R EK ++ ++K + K+ S N+ KN + K R+
Sbjct: 7 DRNREYKEKDRRYEKLHNEKEKLLEERTSRKRYSRSREREQNSY-KNEKEYRKY----RE 61
Query: 257 RESSPSEDGDEKKRDAEVVFIQDL 328
R S D E++R E I L
Sbjct: 62 RSKERSRDKRERERSKERKIISSL 85
>U26026-1|AAA69069.1| 377|Apis mellifera long-wavelength rhodopsin
protein.
Length = 377
Score = 23.8 bits (49), Expect = 1.1
Identities = 10/32 (31%), Positives = 15/32 (46%)
Frame = +3
Query: 240 LMAIEIGSPRLVKMVMKRKGMLRSCLYKTWVL 335
L I + + M M+ +C Y+TWVL
Sbjct: 89 LFVINLAISNFLMMFCMSPPMVINCYYETWVL 120
>AJ780964-1|CAG62942.2| 332|Apis mellifera putative corticotropin
releasing hormone-binding protein protein.
Length = 332
Score = 23.8 bits (49), Expect = 1.1
Identities = 10/30 (33%), Positives = 18/30 (60%)
Frame = -1
Query: 144 VFFSASLHFSKDLFFLCSFFLSITAVLFGH 55
+F + SL+ LFF+ FF +I+ + G+
Sbjct: 1 MFLNGSLYCFARLFFIIGFFNAISGAIKGN 30
>AB207270-1|BAE72137.1| 429|Apis mellifera broad-complex protein.
Length = 429
Score = 23.8 bits (49), Expect = 1.1
Identities = 19/79 (24%), Positives = 34/79 (43%), Gaps = 1/79 (1%)
Frame = +2
Query: 47 VTKCPNKTAVMDKKKEHKKN-RSLEKCNDAEKKTAQIVVEDKKDISSTVNINNAIEKNNS 223
VT P + ++ + ++N R +D K +++ + +T + KNN
Sbjct: 160 VTPTPTTVQQLLRRAQIRRNERRTPDPHDETAKKPRVLSPPLNNNDATPTDFSMGVKNNH 219
Query: 224 DSNKVVNGDRDRESSPSED 280
S+KV E+SP ED
Sbjct: 220 VSSKVEGNGVHEENSPLED 238
>AY703752-1|AAU12748.1| 152|Apis mellifera long-wavelength
rhodopsin protein.
Length = 152
Score = 23.0 bits (47), Expect = 1.9
Identities = 10/32 (31%), Positives = 15/32 (46%)
Frame = +3
Query: 240 LMAIEIGSPRLVKMVMKRKGMLRSCLYKTWVL 335
L I + + M M+ +C Y+TWVL
Sbjct: 55 LFVINLAISDFLMMFCMSPPMVINCYYETWVL 86
>DQ855487-1|ABH88174.1| 125|Apis mellifera chemosensory protein 6
protein.
Length = 125
Score = 22.6 bits (46), Expect = 2.5
Identities = 11/35 (31%), Positives = 16/35 (45%)
Frame = +2
Query: 56 CPNKTAVMDKKKEHKKNRSLEKCNDAEKKTAQIVV 160
C N+ + K + KCN+ +K TA VV
Sbjct: 53 CTNEGRELKKILPDALSTGCNKCNEKQKHTANKVV 87
>AJ973402-1|CAJ01449.1| 125|Apis mellifera hypothetical protein
protein.
Length = 125
Score = 22.6 bits (46), Expect = 2.5
Identities = 11/35 (31%), Positives = 16/35 (45%)
Frame = +2
Query: 56 CPNKTAVMDKKKEHKKNRSLEKCNDAEKKTAQIVV 160
C N+ + K + KCN+ +K TA VV
Sbjct: 53 CTNEGRELKKILPDALSTGCNKCNEKQKHTANKVV 87
>AF469010-1|AAL93136.1| 678|Apis mellifera cGMP-dependent protein
kinase foraging protein.
Length = 678
Score = 22.6 bits (46), Expect = 2.5
Identities = 7/9 (77%), Positives = 7/9 (77%)
Frame = -3
Query: 76 HGRFIWTFC 50
HGR WTFC
Sbjct: 518 HGRKTWTFC 526
>AF004169-1|AAC13418.1| 371|Apis mellifera ultraviolet-sensitive
opsin protein.
Length = 371
Score = 22.6 bits (46), Expect = 2.5
Identities = 8/25 (32%), Positives = 12/25 (48%)
Frame = -3
Query: 106 VLLVFFLFVHHGRFIWTFCYYNSFK 32
+L F + +G IW FC S +
Sbjct: 56 ILFTFLALLGNGLVIWIFCAAKSLR 80
>AF084556-1|AAC71015.1| 652|Apis mellifera pipsqueak protein.
Length = 652
Score = 22.2 bits (45), Expect = 3.3
Identities = 13/58 (22%), Positives = 27/58 (46%)
Frame = +2
Query: 113 LEKCNDAEKKTAQIVVEDKKDISSTVNINNAIEKNNSDSNKVVNGDRDRESSPSEDGD 286
LE C + + + +++ N NN NN+++ NG+ + S+ + +GD
Sbjct: 216 LETCQRNSNNST--ITAGNANTNASNNNNNNNNNNNNNNGANDNGNGNGASNNNNNGD 271
>DQ667184-1|ABG75736.1| 489|Apis mellifera GABA-gated ion channel
protein.
Length = 489
Score = 21.8 bits (44), Expect = 4.3
Identities = 14/50 (28%), Positives = 26/50 (52%)
Frame = -2
Query: 515 LQYSSIRQNYPK*LHPVAVKSTFDDMYLLDPSVLDVFLVQVPYLILVCPM 366
L+Y +QN PK LH A++ + + P + DV ++ Y ++ P+
Sbjct: 428 LRYRGPKQNKPKVLH--AIRRGASILRVSMPKIKDVNIID-KYSRIIFPV 474
>AF274024-1|AAF90150.1| 232|Apis mellifera tetraspanin F139
protein.
Length = 232
Score = 20.6 bits (41), Expect = 10.0
Identities = 12/34 (35%), Positives = 17/34 (50%)
Frame = -1
Query: 141 FFSASLHFSKDLFFLCSFFLSITAVLFGHFVTIT 40
F S +L + F+ SFF A+ H +TIT
Sbjct: 50 FPSITLIVLGSIIFVISFFGCCGAIRESHCMTIT 83
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 133,069
Number of Sequences: 438
Number of extensions: 2615
Number of successful extensions: 15
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 14
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 14
length of database: 146,343
effective HSP length: 54
effective length of database: 122,691
effective search space used: 14354847
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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