Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= epV30508
(516 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At1g13950.1 68414.m01639 eukaryotic translation initiation facto... 201 3e-52
At1g69410.1 68414.m07972 eukaryotic translation initiation facto... 194 3e-50
At1g26630.1 68414.m03243 eukaryotic translation initiation facto... 190 6e-49
At1g56345.1 68414.m06477 pseudouridine synthase family protein l... 29 1.4
At5g14230.1 68418.m01663 ankyrin repeat family protein contains ... 29 1.9
At5g41460.1 68418.m05035 fringe-related protein strong similarit... 29 2.5
At5g03140.1 68418.m00262 lectin protein kinase family protein co... 29 2.5
At3g05830.1 68416.m00654 expressed protein 29 2.5
At3g12240.1 68416.m01527 serine carboxypeptidase S10 family prot... 28 3.2
At3g53330.1 68416.m05884 plastocyanin-like domain-containing pro... 28 4.3
At3g06490.1 68416.m00753 myb family transcription factor (MYB108... 28 4.3
At1g54930.1 68414.m06273 zinc knuckle (CCHC-type) family protein... 28 4.3
At5g13010.1 68418.m01491 RNA helicase, putative similar to DEAH-... 27 5.7
At3g46960.1 68416.m05099 DEAD/DEAH box helicase, putative simila... 27 5.7
At1g20860.1 68414.m02613 phosphate transporter family protein si... 27 5.7
At3g58930.1 68416.m06567 F-box family protein contains F-box dom... 27 7.5
At3g51290.1 68416.m05614 proline-rich family protein 27 7.5
At2g27680.1 68415.m03354 aldo/keto reductase family protein cont... 27 7.5
At5g64280.1 68418.m08075 oxoglutarate/malate translocator, putat... 27 9.9
At4g12460.1 68417.m01971 oxysterol-binding family protein simila... 27 9.9
At4g11430.1 68417.m01841 hydroxyproline-rich glycoprotein family... 27 9.9
At3g09770.2 68416.m01158 zinc finger (C3HC4-type RING finger) fa... 27 9.9
At3g09770.1 68416.m01157 zinc finger (C3HC4-type RING finger) fa... 27 9.9
At1g34355.1 68414.m04265 forkhead-associated domain-containing p... 27 9.9
At1g12380.1 68414.m01431 expressed protein 27 9.9
>At1g13950.1 68414.m01639 eukaryotic translation initiation factor
5A-1 / eIF-5A 1 identical to SP|Q9XI91 Eukaryotic
translation initiation factor 5A-1 (eIF-5A 1)
{Arabidopsis thaliana}
Length = 158
Score = 201 bits (490), Expect = 3e-52
Identities = 87/150 (58%), Positives = 117/150 (78%), Gaps = 1/150 (0%)
Frame = +2
Query: 68 EDTHFETGDSGASATFPMQCSALRKNGFVMLKGRPCKIVEMSTSKTGKHGHAKVHLVGID 247
E+ HFE+ D+GAS T+P Q +RKNG++++K RPCK+VE+STSKTGKHGHAK H V ID
Sbjct: 4 EEHHFESSDAGASKTYPQQAGTIRKNGYIVIKNRPCKVVEVSTSKTGKHGHAKCHFVAID 63
Query: 248 IFNGKKYEDICPSTHNMDVPHVKREDYQLTDISDDGYLTLMADNGDLREDLKIPDGD-LG 424
IF KK EDI PS+HN DVPHV R DYQL DIS+DGY++L+ DNG ++DLK+P+ D L
Sbjct: 64 IFTSKKLEDIVPSSHNCDVPHVNRTDYQLIDISEDGYVSLLTDNGSTKDDLKLPNDDTLL 123
Query: 425 TQLRTDFDSGKELLCTVLKSCGEECVIAVK 514
Q+++ FD GK+L+ +V+ + GEE + A+K
Sbjct: 124 QQIKSGFDDGKDLVVSVMSAMGEEQINALK 153
>At1g69410.1 68414.m07972 eukaryotic translation initiation factor
5A, putative / eIF-5A, putative strong similarity to
eukaryotic initiation factor 5A (2) (Nicotiana
plumbaginifolia) GI:19702, SP|Q9AXQ6| Eukaryotic
translation initiation factor 5A-1 (eIF-5A 1)
{Lycopersicon esculentum}
Length = 158
Score = 194 bits (473), Expect = 3e-50
Identities = 85/150 (56%), Positives = 115/150 (76%), Gaps = 1/150 (0%)
Frame = +2
Query: 68 EDTHFETGDSGASATFPMQCSALRKNGFVMLKGRPCKIVEMSTSKTGKHGHAKVHLVGID 247
++ HFE+ D+GAS T+P Q +RK G +++KGRPCK+VE+STSKTGKHGHAK H V ID
Sbjct: 4 DEHHFESSDAGASKTYPQQAGNIRKGGHIVIKGRPCKVVEVSTSKTGKHGHAKCHFVAID 63
Query: 248 IFNGKKYEDICPSTHNMDVPHVKREDYQLTDISDDGYLTLMADNGDLREDLKIP-DGDLG 424
IF KK EDI PS+HN DVPHV R DYQL DIS+DG+++L+ DNG ++DLK+P D L
Sbjct: 64 IFTSKKLEDIVPSSHNCDVPHVNRVDYQLIDISEDGFVSLLTDNGSTKDDLKLPTDEALL 123
Query: 425 TQLRTDFDSGKELLCTVLKSCGEECVIAVK 514
TQL+ F+ GK+++ +V+ + GEE + A+K
Sbjct: 124 TQLKNGFEEGKDIVVSVMSAMGEEQMCALK 153
>At1g26630.1 68414.m03243 eukaryotic translation initiation factor
5A, putative / eIF-5A, putative strong similariy to
SP|Q9AXQ6 Eukaryotic translation initiation factor 5A-1
(eIF-5A 1) {Lycopersicon esculentum}
Length = 159
Score = 190 bits (462), Expect = 6e-49
Identities = 83/150 (55%), Positives = 111/150 (74%), Gaps = 1/150 (0%)
Frame = +2
Query: 68 EDTHFETGDSGASATFPMQCSALRKNGFVMLKGRPCKIVEMSTSKTGKHGHAKVHLVGID 247
++ HFE +SGAS T+P +RK G +++K RPCK+VE+STSKTGKHGHAK H V ID
Sbjct: 4 DEHHFEASESGASKTYPQSAGNIRKGGHIVIKNRPCKVVEVSTSKTGKHGHAKCHFVAID 63
Query: 248 IFNGKKYEDICPSTHNMDVPHVKREDYQLTDISDDGYLTLMADNGDLREDLKIP-DGDLG 424
IF KK EDI PS+HN DVPHV R DYQL DI++DG+++L+ D+G ++DLK+P D L
Sbjct: 64 IFTAKKLEDIVPSSHNCDVPHVNRVDYQLIDITEDGFVSLLTDSGGTKDDLKLPTDDGLT 123
Query: 425 TQLRTDFDSGKELLCTVLKSCGEECVIAVK 514
Q+R FD GK+++ +V+ S GEE + AVK
Sbjct: 124 AQMRLGFDEGKDIVVSVMSSMGEEQICAVK 153
>At1g56345.1 68414.m06477 pseudouridine synthase family protein low
similarity to SP|P23851 Ribosomal large subunit
pseudouridine synthase C (EC 4.2.1.70) (Pseudouridylate
synthase) (Uracil hydrolyase) {Escherichia coli};
contains Pfam profile PF00849: RNA pseudouridylate
synthase
Length = 322
Score = 29.5 bits (63), Expect = 1.4
Identities = 20/69 (28%), Positives = 34/69 (49%), Gaps = 1/69 (1%)
Frame = -3
Query: 478 QHGAQQFLAAVEVSTQLCAEVTIRDFEVLTQVTIV-SHQGQVAIIRDISQLVVFALHVGY 302
+HGA + AA++V L +RD E +V V S + + + D++ ++V G
Sbjct: 176 KHGAWRVYAALDVGRVLPGGSFVRDMETTFEVVSVNSVKNESCELEDVNHVIVAE---GE 232
Query: 301 VHVVCGGTD 275
+ CGG D
Sbjct: 233 RELSCGGDD 241
>At5g14230.1 68418.m01663 ankyrin repeat family protein contains
ankyrin repeats, Pfam:PF00023
Length = 591
Score = 29.1 bits (62), Expect = 1.9
Identities = 15/34 (44%), Positives = 16/34 (47%)
Frame = +2
Query: 398 LKIPDGDLGTQLRTDFDSGKELLCTVLKSCGEEC 499
L IPDGD T L G +C L SCG C
Sbjct: 412 LDIPDGDGYTPLMLAAREGHGHMCEYLISCGANC 445
>At5g41460.1 68418.m05035 fringe-related protein strong similarity
to unknown protein (pir||T13026) similarity to predicted
proteins + similar to hypothetical protein GB:AAC23643
[Arabidopsis thaliana] + weak similarity to Fringe
[Schistocerca gregaria](GI:6573138);Fringe encodes an
extracellular protein that regulates Notch signalling.
Length = 524
Score = 28.7 bits (61), Expect = 2.5
Identities = 11/29 (37%), Positives = 16/29 (55%)
Frame = +3
Query: 33 VVKFKTQQWVTSKTHTSRPETPGPQPPSP 119
++ F T Q K++ S P +P P PP P
Sbjct: 80 LILFHTNQTAVIKSYASPPPSPPPPPPPP 108
>At5g03140.1 68418.m00262 lectin protein kinase family protein
contains Pfam domains, PF00138: Legume lectins alpha
domain, PF00139: Legume lectins beta domain and PF00069:
Protein kinase domain
Length = 711
Score = 28.7 bits (61), Expect = 2.5
Identities = 13/36 (36%), Positives = 21/36 (58%)
Frame = -1
Query: 168 RPFSITKPFLRRAEHCMGKVAEAPESPVSKCVSSMS 61
+P +T+P +R + A+ PE P++K SSMS
Sbjct: 631 QPDPVTRPTMRSVVQILVGEADVPEVPIAKPSSSMS 666
>At3g05830.1 68416.m00654 expressed protein
Length = 336
Score = 28.7 bits (61), Expect = 2.5
Identities = 24/82 (29%), Positives = 39/82 (47%)
Frame = +2
Query: 221 AKVHLVGIDIFNGKKYEDICPSTHNMDVPHVKREDYQLTDISDDGYLTLMADNGDLREDL 400
AK + G+D K ED+ P V+ +D ++T + D+ + LM +G +
Sbjct: 186 AKAGIGGMDSELQKLLEDVSPMKFERMNRLVEVKDEEITKLKDE--IRLM--SGQWKHKT 241
Query: 401 KIPDGDLGTQLRTDFDSGKELL 466
K + L Q RTD D K++L
Sbjct: 242 KELESQLEKQRRTDQDLKKKVL 263
>At3g12240.1 68416.m01527 serine carboxypeptidase S10 family protein
contains Pfam profile: PF00450 serine carboxypeptidase;
similar to serine carboxypeptidase I precursor
(SP:P37890) [Oryza sativa]
Length = 436
Score = 28.3 bits (60), Expect = 3.2
Identities = 20/76 (26%), Positives = 33/76 (43%), Gaps = 4/76 (5%)
Frame = -3
Query: 385 VTIVSHQGQVAIIRDISQL---VVFALHVGYVHVVCGGTD-IFILFTIEDINPNQVNFSV 218
+ ++ H +IIR + + F L GY+ V D +F F + NP + V
Sbjct: 16 LVLIQHADSSSIIRYLPGFEGPLPFELETGYIGVGQKEEDQLFYYFIKSENNPEEDPLLV 75
Query: 217 AVLSGFGCGHFNNLAW 170
+ G GC F+ L +
Sbjct: 76 WLTGGPGCSSFSGLVY 91
>At3g53330.1 68416.m05884 plastocyanin-like domain-containing
protein similar to mavicyanin SP:P80728 from [Cucurbita
pepo]
Length = 310
Score = 27.9 bits (59), Expect = 4.3
Identities = 13/18 (72%), Positives = 13/18 (72%), Gaps = 1/18 (5%)
Frame = +3
Query: 66 SKTHT-SRPETPGPQPPS 116
SKTH SRP TP P PPS
Sbjct: 127 SKTHERSRPITPSPPPPS 144
Score = 26.6 bits (56), Expect = 9.9
Identities = 12/17 (70%), Positives = 12/17 (70%), Gaps = 1/17 (5%)
Frame = +3
Query: 66 SKTHT-SRPETPGPQPP 113
SKTH SRP TP P PP
Sbjct: 144 SKTHEPSRPNTPPPPPP 160
>At3g06490.1 68416.m00753 myb family transcription factor (MYB108)
identical to transcription factor MYB108 GI:15375290
from [Arabidopsis thaliana]
Length = 323
Score = 27.9 bits (59), Expect = 4.3
Identities = 17/56 (30%), Positives = 27/56 (48%), Gaps = 2/56 (3%)
Frame = +3
Query: 171 HARLLKCPHPKPESTATLKFTWLGLISSMVKSMKIS--VPPHTTWTYPT*SAKTTN 332
HA+ LKC + T+K+ W+ + ++S S TT T T SA T++
Sbjct: 122 HAKQLKCDVNSQQFKDTMKYLWMPRLVERIQSASASSAAAATTTTTTTTGSAGTSS 177
>At1g54930.1 68414.m06273 zinc knuckle (CCHC-type) family protein
contains INTERPRO domain, IPR001878: Zn-finger CCHC type
Length = 353
Score = 27.9 bits (59), Expect = 4.3
Identities = 15/45 (33%), Positives = 17/45 (37%), Gaps = 3/45 (6%)
Frame = +3
Query: 69 KTHTSRPETPGPQPPS---PCNVRPCVKTVSLC*RVVHARLLKCP 194
KT T P PP PCN PC S + + R CP
Sbjct: 22 KTTTKPTAAAAPSPPDIHCPCNAGPCNTVTSKTEKNPNRRFYTCP 66
>At5g13010.1 68418.m01491 RNA helicase, putative similar to DEAH-box
RNA helicase [Chlamydomonas reinhardtii] GI:12044832;
contains Pfam profiles PF04408: Helicase associated
domain (HA2), PF00271: Helicase conserved C-terminal
domain
Length = 1226
Score = 27.5 bits (58), Expect = 5.7
Identities = 15/51 (29%), Positives = 28/51 (54%), Gaps = 1/51 (1%)
Frame = +2
Query: 311 VKREDYQLTDISDDGYLTLMADNGDLREDLKIPDGDL-GTQLRTDFDSGKE 460
V+R+ +++ Y L ADN + + G + GT+++T+FDS +E
Sbjct: 350 VRRDGSKMSLAQSKKYSQLNADNAQWEDRQLLRSGAVRGTEVQTEFDSEEE 400
>At3g46960.1 68416.m05099 DEAD/DEAH box helicase, putative similar to
SP|P35207 Antiviral protein SKI2 {Saccharomyces
cerevisiae}; contains Pfam profiles PF00270: DEAD/DEAH
box helicase, PF00271: Helicase conserved C-terminal
domain
Length = 1347
Score = 27.5 bits (58), Expect = 5.7
Identities = 17/51 (33%), Positives = 30/51 (58%), Gaps = 6/51 (11%)
Frame = +2
Query: 341 ISDDGYLTLMADNG--DLREDLKIPDGDLGTQLR----TDFDSGKELLCTV 475
+SD+ L + A G D+ +++ D DL Q++ + +SG+EL+CTV
Sbjct: 1141 MSDEALLQMPAFQGRIDVLKNIGCIDDDLVVQIKGRVACEMNSGEELICTV 1191
>At1g20860.1 68414.m02613 phosphate transporter family protein
similar to phosphate transporter [Catharanthus roseus]
GI:2208908, inorganic phosphate transporter 1 [Solanum
tuberosum] GI:1420871; contains Pfam profile PF00083:
major facilitator superfamily protein
Length = 534
Score = 27.5 bits (58), Expect = 5.7
Identities = 17/45 (37%), Positives = 20/45 (44%)
Frame = +3
Query: 45 KTQQWVTSKTHTSRPETPGPQPPSPCNVRPCVKTVSLC*RVVHAR 179
K Q V S++H S T P PP P P K S C +H R
Sbjct: 243 KDMQRVMSRSHISDEATTDPPPPPP---PPSYKLFSRCFFRLHGR 284
>At3g58930.1 68416.m06567 F-box family protein contains F-box domain
Pfam:PF00646
Length = 482
Score = 27.1 bits (57), Expect = 7.5
Identities = 26/88 (29%), Positives = 39/88 (44%), Gaps = 11/88 (12%)
Frame = -1
Query: 288 VEGQISSYFLPLK----ISIPTK*TL-AWPCFPVLDVDISTILH-----GRPFSITKPFL 139
V G I S FLP K S+ +K L W P+LD+D S LH I + F+
Sbjct: 11 VRGHILS-FLPAKHIALTSVLSKSWLNLWKLIPILDIDDSEFLHPEEGKAERLEIRQSFV 69
Query: 138 RRAEHCMGKVAEAPESPVS-KCVSSMSP 58
+ + ++P S KC++ + P
Sbjct: 70 DFVDRVLALQDDSPIDRFSLKCITGIHP 97
>At3g51290.1 68416.m05614 proline-rich family protein
Length = 602
Score = 27.1 bits (57), Expect = 7.5
Identities = 10/25 (40%), Positives = 13/25 (52%)
Frame = +3
Query: 45 KTQQWVTSKTHTSRPETPGPQPPSP 119
+T W T+ T + P P P PP P
Sbjct: 91 ETTTWTTTTTSSVLPPPPPPPPPPP 115
>At2g27680.1 68415.m03354 aldo/keto reductase family protein
contains Pfam profile PF00248: oxidoreductase, aldo/keto
reductase family
Length = 384
Score = 27.1 bits (57), Expect = 7.5
Identities = 15/46 (32%), Positives = 24/46 (52%)
Frame = +2
Query: 269 EDICPSTHNMDVPHVKREDYQLTDISDDGYLTLMADNGDLREDLKI 406
++I S MDV + + D ++DGYL + DL+E+ KI
Sbjct: 147 QNIDISRKRMDVAALDMLQFHWWDYANDGYLDALKHLTDLKEEGKI 192
>At5g64280.1 68418.m08075 oxoglutarate/malate translocator, putative
similar to SWISS-PROT:Q41364 2-oxoglutarate/malate
translocator, chloroplast precursor [Spinach]{Spinacia
oleracea}
Length = 549
Score = 26.6 bits (56), Expect = 9.9
Identities = 15/75 (20%), Positives = 30/75 (40%)
Frame = +3
Query: 81 SRPETPGPQPPSPCNVRPCVKTVSLC*RVVHARLLKCPHPKPESTATLKFTWLGLISSMV 260
++P+ P P PP P K + L V +++ P+PE + + L + +
Sbjct: 65 NKPQPPPPSPPQPQG----AKLIPLAISVSIGLIVRFLIPRPEQVTSQGWQLLSIFLFTI 120
Query: 261 KSMKISVPPHTTWTY 305
+ + P W +
Sbjct: 121 SGLVLGPLPVGAWAF 135
>At4g12460.1 68417.m01971 oxysterol-binding family protein similar
to SP|P22059 Oxysterol-binding protein 1 {Homo sapiens};
contains Pfam profiles PF00169: PH domain, PF01237:
Oxysterol-binding protein
Length = 694
Score = 26.6 bits (56), Expect = 9.9
Identities = 12/36 (33%), Positives = 18/36 (50%)
Frame = +2
Query: 71 DTHFETGDSGASATFPMQCSALRKNGFVMLKGRPCK 178
D +E G SG S + +A +G+ +GR CK
Sbjct: 367 DQAYEYGKSGKSLLRALNVAAFAVSGYASTEGRHCK 402
>At4g11430.1 68417.m01841 hydroxyproline-rich glycoprotein family
protein contains proline-rich extensin domains,
INTERPRO:IPR002965; related to hydroxyproline-rich
glycoprotein [Phaseolus vulgaris] gi|169349|gb|AAA33765
Length = 219
Score = 26.6 bits (56), Expect = 9.9
Identities = 16/50 (32%), Positives = 19/50 (38%)
Frame = +3
Query: 75 HTSRPETPGPQPPSPCNVRPCVKTVSLC*RVVHARLLKCPHPKPESTATL 224
H P P P PP P + P V T + H R P P P T+
Sbjct: 116 HRRSPPPPPPPPPPPPTITPPV-TTTTAGHHHHRRSPPPPPPPPPPPPTI 164
>At3g09770.2 68416.m01158 zinc finger (C3HC4-type RING finger)
family protein contains Pfam domain, PF00097: Zinc
finger, C3HC4 type (RING finger)
Length = 341
Score = 26.6 bits (56), Expect = 9.9
Identities = 15/46 (32%), Positives = 21/46 (45%)
Frame = +3
Query: 69 KTHTSRPETPGPQPPSPCNVRPCVKTVSLC*RVVHARLLKCPHPKP 206
+ HT+ P P P PPS P + T +V A + P+P P
Sbjct: 17 RNHTAAPPPP-PPPPSSSLPPPPLPTEIQANPIVFAAVTPYPNPNP 61
>At3g09770.1 68416.m01157 zinc finger (C3HC4-type RING finger)
family protein contains Pfam domain, PF00097: Zinc
finger, C3HC4 type (RING finger)
Length = 388
Score = 26.6 bits (56), Expect = 9.9
Identities = 15/46 (32%), Positives = 21/46 (45%)
Frame = +3
Query: 69 KTHTSRPETPGPQPPSPCNVRPCVKTVSLC*RVVHARLLKCPHPKP 206
+ HT+ P P P PPS P + T +V A + P+P P
Sbjct: 17 RNHTAAPPPP-PPPPSSSLPPPPLPTEIQANPIVFAAVTPYPNPNP 61
>At1g34355.1 68414.m04265 forkhead-associated domain-containing
protein / FHA domain-containing protein
Length = 1477
Score = 26.6 bits (56), Expect = 9.9
Identities = 9/28 (32%), Positives = 15/28 (53%)
Frame = +2
Query: 41 IQNTTMGDIEDTHFETGDSGASATFPMQ 124
+ NT +GD ED H + G ++ P +
Sbjct: 341 LANTALGDDEDLHLDVTSEGTGSSVPSE 368
>At1g12380.1 68414.m01431 expressed protein
Length = 793
Score = 26.6 bits (56), Expect = 9.9
Identities = 9/19 (47%), Positives = 12/19 (63%)
Frame = +3
Query: 63 TSKTHTSRPETPGPQPPSP 119
T+ HT+ +TP P PP P
Sbjct: 3 TTNAHTATQQTPPPPPPPP 21
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,153,870
Number of Sequences: 28952
Number of extensions: 272619
Number of successful extensions: 937
Number of sequences better than 10.0: 25
Number of HSP's better than 10.0 without gapping: 850
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 922
length of database: 12,070,560
effective HSP length: 76
effective length of database: 9,870,208
effective search space used: 937669760
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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