Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= epV30505
         (516 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

02_01_0138 + 999809-999821,1000456-1001341,1001424-1003221,10037...    28   3.9  
04_04_1657 - 35102751-35102868,35102987-35103504,35104065-351042...    28   5.1  
10_08_0296 - 16595193-16595222,16595923-16596067,16597387-165974...    27   8.9  

>02_01_0138 +
           999809-999821,1000456-1001341,1001424-1003221,
           1003716-1003805,1004034-1004111,1004513-1004518,
           1004849-1004958,1005174-1005369
          Length = 1058

 Score = 28.3 bits (60), Expect = 3.9
 Identities = 14/29 (48%), Positives = 16/29 (55%)
 Frame = +2

Query: 20  FSLCQRKRQNKANLRSVYT*RDVNGTGTR 106
           FS CQ+     ANLRS+    D NG G R
Sbjct: 879 FSRCQKLESLPANLRSLDFLEDANGLGMR 907


>04_04_1657 -
           35102751-35102868,35102987-35103504,35104065-35104211,
           35104289-35106262,35106964-35107089,35107178-35107264,
           35107335-35107424,35107725-35107811,35108248-35108300,
           35109339-35109387
          Length = 1082

 Score = 27.9 bits (59), Expect = 5.1
 Identities = 16/46 (34%), Positives = 22/46 (47%)
 Frame = +1

Query: 298 FCFTGKYRHQDVTSSRMNRVTVHTKYALSY*FSMNASRPYKTCDVC 435
           F FT K RH       ++  +  +K AL    S N  +PY+ CD C
Sbjct: 646 FGFTRK-RHNCYNCGLVHCHSCSSKKALRAALSPNPGKPYRVCDSC 690


>10_08_0296 -
           16595193-16595222,16595923-16596067,16597387-16597488,
           16597630-16597685,16598245-16598399,16598755-16598918,
           16599116-16599237,16599542-16599754,16599874-16600023,
           16600909-16600959
          Length = 395

 Score = 27.1 bits (57), Expect = 8.9
 Identities = 10/21 (47%), Positives = 14/21 (66%)
 Frame = +2

Query: 224 IPHYKELLNDETQFYHFFCQM 286
           +P +K+L NDE QF   FC +
Sbjct: 275 LPQFKDLPNDEQQFKAAFCYL 295


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,690,155
Number of Sequences: 37544
Number of extensions: 204848
Number of successful extensions: 362
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 359
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 362
length of database: 14,793,348
effective HSP length: 77
effective length of database: 11,902,460
effective search space used: 1118831240
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)