Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= epV30501
(516 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
07_03_1291 + 25545749-25546262,25546989-25547669,25547693-255477... 53 1e-07
06_02_0297 - 13891954-13892556,13893019-13893855,13894179-138943... 51 5e-07
07_01_0242 + 1775704-1776797,1776839-1777759,1778312-1778412,177... 47 1e-05
02_02_0078 + 6587491-6588021,6588160-6589151,6592430-6592607,659... 41 7e-04
08_02_0104 + 12404890-12405129,12405244-12405333,12405953-124060... 31 0.73
02_01_0473 - 3403547-3404241,3404455-3404983,3405299-3405477,340... 30 1.3
04_03_0658 + 18447986-18448117,18448204-18448317,18448388-184485... 29 1.7
03_02_0091 + 5574528-5577254 29 1.7
01_01_0753 - 5814087-5814344,5814461-5814646,5814847-5815004,581... 29 1.7
08_01_1010 - 10215625-10216335,10216372-10216473 29 2.9
03_05_0815 + 27917516-27917767,27918024-27918110,27918281-279183... 29 2.9
06_03_0743 + 24069752-24070483,24071890-24072345 28 5.1
09_06_0111 - 20924838-20924969,20925147-20925290,20925391-209254... 27 6.8
08_02_0550 + 18509365-18509589,18509668-18510644,18510828-185118... 27 6.8
06_02_0303 + 14022428-14022652,14023247-14024159,14024310-140247... 27 6.8
02_05_0525 + 29764176-29764518,29765351-29765679 27 6.8
11_01_0285 - 2115051-2115146,2115220-2115306,2115417-2115503,211... 27 8.9
04_01_0612 + 8036625-8036751,8036917-8037110,8037463-8038230 27 8.9
02_02_0709 - 13163580-13163725,13163774-13163861 27 8.9
02_02_0604 - 12064451-12065683,12065729-12065827,12065858-120659... 27 8.9
01_06_1328 + 36347963-36347984,36348609-36348764,36349083-363492... 27 8.9
>07_03_1291 +
25545749-25546262,25546989-25547669,25547693-25547751,
25549152-25549242,25549330-25549743,25550191-25550243,
25550947-25551177,25551492-25551708,25551790-25551890,
25552446-25552532,25553536-25553676,25553839-25553961,
25554070-25554522,25554931-25555308,25555410-25556060,
25556264-25556368,25556482-25556707,25557204-25557241
Length = 1520
Score = 53.2 bits (122), Expect = 1e-07
Identities = 32/86 (37%), Positives = 44/86 (51%)
Frame = +2
Query: 17 KGEALAVSLDIAKAFDRVWHRALLSKLPSYGIPEGLCKWIASFLDGRSITVVVDGDCSDT 196
K + L + LD AKAFD V ++L L G P+ WI + L V++ G
Sbjct: 33 KCQTLIIKLDFAKAFDSVNWQSLFQILSVKGFPDNWISWIKNLLQTSKSAVLLHGIPGKW 92
Query: 197 MTINAGVPQGSVLSPTLFILYINDML 274
+T G+ QG LSP LFIL + D+L
Sbjct: 93 ITCKKGLRQGDPLSPYLFIL-VADVL 117
>06_02_0297 -
13891954-13892556,13893019-13893855,13894179-13894394,
13895455-13895874,13896198-13896506
Length = 794
Score = 51.2 bits (117), Expect = 5e-07
Identities = 28/81 (34%), Positives = 41/81 (50%)
Frame = +2
Query: 14 SKGEALAVSLDIAKAFDRVWHRALLSKLPSYGIPEGLCKWIASFLDGRSITVVVDGDCSD 193
SK E + + LD KAFD + H A+LS + G P +W+ S V+++G +
Sbjct: 447 SKREIVLLKLDFEKAFDTIEHSAILSVMQHMGFPLKWIEWVQMVFSTASSAVLLNGVPGN 506
Query: 194 TMTINAGVPQGSVLSPTLFIL 256
+ GV QG LS LF+L
Sbjct: 507 SFKCRRGVRQGVPLSLLLFVL 527
>07_01_0242 + 1775704-1776797,1776839-1777759,1778312-1778412,
1778770-1778900,1779530-1779788,1779823-1780098,
1780100-1781352
Length = 1344
Score = 46.8 bits (106), Expect = 1e-05
Identities = 30/86 (34%), Positives = 40/86 (46%)
Frame = +2
Query: 17 KGEALAVSLDIAKAFDRVWHRALLSKLPSYGIPEGLCKWIASFLDGRSITVVVDGDCSDT 196
K + + V LD KAFD V +L L G PE WI L V+++G
Sbjct: 1048 KCQTIIVKLDFTKAFDSVIWSSLFKILAVRGFPENWISWIKGLLSSSKSAVLLNGVPGRW 1107
Query: 197 MTINAGVPQGSVLSPTLFILYINDML 274
+ G+ QG LS LFIL + D+L
Sbjct: 1108 ICCKKGLLQGDPLSSYLFIL-VADVL 1132
>02_02_0078 +
6587491-6588021,6588160-6589151,6592430-6592607,
6592635-6592794,6592992-6593158,6593246-6593869
Length = 883
Score = 40.7 bits (91), Expect = 7e-04
Identities = 21/81 (25%), Positives = 40/81 (49%)
Frame = +2
Query: 14 SKGEALAVSLDIAKAFDRVWHRALLSKLPSYGIPEGLCKWIASFLDGRSITVVVDGDCSD 193
+K A+ +D+ KA+DR+ L L G + + + + ++G+ +D
Sbjct: 248 NKKPFFALKIDMMKAYDRIEWSYLHGCLMRLGFEQDWINTVMRCVTSTRYAIRINGELTD 307
Query: 194 TMTINAGVPQGSVLSPTLFIL 256
T+ + G+ QG +SP LF+L
Sbjct: 308 TVVPSRGIRQGDPISPYLFLL 328
>08_02_0104 + 12404890-12405129,12405244-12405333,12405953-12406036,
12406888-12407132,12409032-12409095,12409270-12409968,
12410063-12410176,12410287-12410418,12410594-12410770,
12411085-12411138,12411230-12411292,12411396-12412307,
12412408-12412535,12413680-12413962
Length = 1094
Score = 30.7 bits (66), Expect = 0.73
Identities = 19/95 (20%), Positives = 38/95 (40%)
Frame = +2
Query: 14 SKGEALAVSLDIAKAFDRVWHRALLSKLPSYGIPEGLCKWIASFLDGRSITVVVDGDCSD 193
S E + ++ D +H + + G+ + L W A +G + +V D +CS
Sbjct: 886 SNSEDMLSPAELPFMIDLDYHTQIEYRWGGEGLRKTLICWAAEKSEGGQVVLVEDEECSS 945
Query: 194 TMTINAGVPQGSVLSPTLFILYINDMLSIDGMHCY 298
T I+ V + P + + + I + C+
Sbjct: 946 TYCISFRVKNAEAVPP---VKELRKTMRIQALRCH 977
>02_01_0473 -
3403547-3404241,3404455-3404983,3405299-3405477,
3405868-3405952,3406136-3406482,3407061-3407159,
3408135-3408636
Length = 811
Score = 29.9 bits (64), Expect = 1.3
Identities = 30/82 (36%), Positives = 37/82 (45%)
Frame = +2
Query: 32 AVSLDIAKAFDRVWHRALLSKLPSYGIPEGLCKWIASFLDGRSITVVVDGDCSDTMTINA 211
A+ LD++KA+DRV L L G + KW S C D I
Sbjct: 235 ALKLDLSKAYDRVDWAFLDGVLQRMGFGDTWRKWTMS--------------CVDICPIR- 279
Query: 212 GVPQGSVLSPTLFILYINDMLS 277
G+ QG LSP LF L+I D LS
Sbjct: 280 GLRQGDPLSPYLF-LFIADGLS 300
>04_03_0658 +
18447986-18448117,18448204-18448317,18448388-18448507,
18448589-18449215,18449289-18449462,18449545-18449809,
18449889-18449959,18450043-18450145,18450221-18450280,
18450533-18450744,18450830-18450901,18451446-18451502,
18451598-18451882,18452359-18452371,18452396-18452463,
18452649-18452747,18452836-18452967,18453038-18453141,
18453234-18453423,18453519-18453524
Length = 967
Score = 29.5 bits (63), Expect = 1.7
Identities = 24/88 (27%), Positives = 40/88 (45%), Gaps = 4/88 (4%)
Frame = +2
Query: 35 VSLDIAKAFDRVWHRALLSKLPSYGIPEGLCKWIASFLDGRSITVVVDGD----CSDTMT 202
+S+ + R ++LL+ S+ +P WIA+ +D S +VVD D +
Sbjct: 151 LSVHDKEVIGRTCFKSLLNFQSSF-VPNQFASWIANHVDVSSSDIVVDDKVIPLTEDCVH 209
Query: 203 INAGVPQGSVLSPTLFILYINDMLSIDG 286
I G+P G + + F L N +L G
Sbjct: 210 IILGLPVGGIEISSNFELGKNKILETFG 237
>03_02_0091 + 5574528-5577254
Length = 908
Score = 29.5 bits (63), Expect = 1.7
Identities = 17/58 (29%), Positives = 26/58 (44%)
Frame = +2
Query: 47 IAKAFDRVWHRALLSKLPSYGIPEGLCKWIASFLDGRSITVVVDGDCSDTMTINAGVP 220
+ K D + HR L LP G P+ + I L S +++DG ++ GVP
Sbjct: 221 VGKMQDAMAHRLGLCALPDGGAPDHRARPIFEVLRDSSFLLLLDGVTKPVDLVDIGVP 278
>01_01_0753 -
5814087-5814344,5814461-5814646,5814847-5815004,
5815082-5815214,5815299-5815489,5815826-5816281,
5816543-5816661,5816729-5816872,5816994-5817065,
5817368-5817500,5817598-5817733
Length = 661
Score = 29.5 bits (63), Expect = 1.7
Identities = 11/34 (32%), Positives = 18/34 (52%)
Frame = +2
Query: 92 KLPSYGIPEGLCKWIASFLDGRSITVVVDGDCSD 193
KLP + +C W A +L G+S + +VD +
Sbjct: 563 KLPEADDQKSMCNWAAEYLKGKSYSKLVDASLKE 596
>08_01_1010 - 10215625-10216335,10216372-10216473
Length = 270
Score = 28.7 bits (61), Expect = 2.9
Identities = 14/47 (29%), Positives = 23/47 (48%)
Frame = -2
Query: 437 SSIHPIWRLAPESSPLQTQVLIVSLAPRSERDSDGRYIAHPPCYHLH 297
S P+WR P Q + ++ +PR+ + + G + HP C LH
Sbjct: 223 SGTSPLWRRRRRHHPYQRRGSSIACSPRAVQVAGGHH-HHPRCAILH 268
>03_05_0815 + 27917516-27917767,27918024-27918110,27918281-27918394,
27919644-27919835,27919925-27921677,27921771-27922708,
27923587-27923859
Length = 1202
Score = 28.7 bits (61), Expect = 2.9
Identities = 15/33 (45%), Positives = 17/33 (51%), Gaps = 2/33 (6%)
Frame = +3
Query: 342 VSLGAWCKRDDQNLCL--KWRTLWGESPNGVNR 434
VS G WC R NLCL LWG+ +NR
Sbjct: 1078 VSFGVWCIRQILNLCLVESRPELWGKYTYVLNR 1110
>06_03_0743 + 24069752-24070483,24071890-24072345
Length = 395
Score = 27.9 bits (59), Expect = 5.1
Identities = 11/37 (29%), Positives = 19/37 (51%)
Frame = -2
Query: 407 PESSPLQTQVLIVSLAPRSERDSDGRYIAHPPCYHLH 297
P S P++ + ++SL P + D D + H +H H
Sbjct: 53 PSSPPIREALPLLSLTPSTTHDDDHHHRRHDQDHHHH 89
>09_06_0111 -
20924838-20924969,20925147-20925290,20925391-20925453,
20925993-20926116,20926779-20927005,20927088-20927255,
20927348-20927498,20927567-20927889
Length = 443
Score = 27.5 bits (58), Expect = 6.8
Identities = 17/58 (29%), Positives = 25/58 (43%)
Frame = -3
Query: 346 ETLMADISRIPRAIICIAMHAINRQHVIDIQDEKRGGEHRTLWNASVNGHGIRTVTVY 173
+ + A ++R P A+ + + + QDEK G TL GH I T T Y
Sbjct: 282 KNMPALLAREPSALAYAIKRSCENKAEVVAQDEKESGLRATLNLGHTFGHAIETGTGY 339
>08_02_0550 + 18509365-18509589,18509668-18510644,18510828-18511802,
18511885-18512142,18512216-18512326,18512418-18512496,
18512595-18512687,18512773-18512958
Length = 967
Score = 27.5 bits (58), Expect = 6.8
Identities = 11/30 (36%), Positives = 18/30 (60%), Gaps = 3/30 (10%)
Frame = -2
Query: 359 PRSERDSDGRYIAHPP---CYHLHSNACHQ 279
P+S+R+ D + I + CY +H+ CHQ
Sbjct: 911 PKSDRELDDKSIQNIQRDLCYFIHNECCHQ 940
>06_02_0303 +
14022428-14022652,14023247-14024159,14024310-14024700,
14024949-14025206,14025284-14025394,14025486-14025564,
14025842-14026027
Length = 720
Score = 27.5 bits (58), Expect = 6.8
Identities = 11/30 (36%), Positives = 18/30 (60%), Gaps = 3/30 (10%)
Frame = -2
Query: 359 PRSERDSDGRYIAHPP---CYHLHSNACHQ 279
P+S+R+ D + I + CY +H+ CHQ
Sbjct: 664 PKSDRELDDKSIQNIQRDLCYFIHNECCHQ 693
>02_05_0525 + 29764176-29764518,29765351-29765679
Length = 223
Score = 27.5 bits (58), Expect = 6.8
Identities = 16/47 (34%), Positives = 25/47 (53%)
Frame = +2
Query: 32 AVSLDIAKAFDRVWHRALLSKLPSYGIPEGLCKWIASFLDGRSITVV 172
AV+ D+ A R RA L+ G E +C+W+A L+ R + +V
Sbjct: 65 AVTFDMRGA-GRSTGRASLTGSTEVGDVEAVCRWVADNLNPRGVLLV 110
>11_01_0285 -
2115051-2115146,2115220-2115306,2115417-2115503,
2115724-2115809,2115889-2115992,2117447-2117533,
2117621-2117744,2118420-2118538,2118626-2118755,
2118902-2118990,2119122-2119210,2119985-2120078,
2120187-2120266,2120363-2120452,2121195-2121281,
2121381-2121425,2121847-2121923,2121997-2122102,
2122258-2122339,2122430-2122501,2122502-2122585,
2123007-2123084,2123155-2123224,2123737-2123851
Length = 725
Score = 27.1 bits (57), Expect = 8.9
Identities = 20/72 (27%), Positives = 35/72 (48%)
Frame = +2
Query: 80 ALLSKLPSYGIPEGLCKWIASFLDGRSITVVVDGDCSDTMTINAGVPQGSVLSPTLFILY 259
A+ S L +GIPEG C I + R ++VD C+ ++ VP L P + +
Sbjct: 155 AIGSGLIYHGIPEGAC--IGLYFINRPEWIIVDHACAAYSFVS--VPLYDTLGPDA-VQF 209
Query: 260 INDMLSIDGMHC 295
I + +++ + C
Sbjct: 210 IVNHATVEAIFC 221
>04_01_0612 + 8036625-8036751,8036917-8037110,8037463-8038230
Length = 362
Score = 27.1 bits (57), Expect = 8.9
Identities = 13/43 (30%), Positives = 21/43 (48%)
Frame = -2
Query: 179 RLQRP*CSAHPKS*RSTCRDPRGFRKMVTSIEVPYARPCRRLS 51
R+++ +A P S C DP+ ++ I V Y+ CR S
Sbjct: 21 RVKKKRAAASPNSEDGYCADPKKLNALIEDIFVCYSLSCREPS 63
>02_02_0709 - 13163580-13163725,13163774-13163861
Length = 77
Score = 27.1 bits (57), Expect = 8.9
Identities = 10/20 (50%), Positives = 16/20 (80%)
Frame = -2
Query: 374 IVSLAPRSERDSDGRYIAHP 315
IV++ PR + D++GRY A+P
Sbjct: 3 IVTVIPRPQADAEGRYEANP 22
>02_02_0604 -
12064451-12065683,12065729-12065827,12065858-12065955,
12066782-12066924,12067233-12067729
Length = 689
Score = 27.1 bits (57), Expect = 8.9
Identities = 16/44 (36%), Positives = 22/44 (50%)
Frame = +2
Query: 125 CKWIASFLDGRSITVVVDGDCSDTMTINAGVPQGSVLSPTLFIL 256
CK + L+ I + +G SD G+ QG LSP LF+L
Sbjct: 205 CKKLRYLLEETRIDI--NGTLSDPFKPMRGLRQGDPLSPLLFVL 246
>01_06_1328 +
36347963-36347984,36348609-36348764,36349083-36349261,
36349347-36349442,36349525-36349594,36349635-36349705,
36350654-36351286
Length = 408
Score = 27.1 bits (57), Expect = 8.9
Identities = 20/57 (35%), Positives = 27/57 (47%), Gaps = 2/57 (3%)
Frame = -3
Query: 361 HHAPRE-TLMADISRIPRAIICI-AMHAINRQHVIDIQDEKRGGEHRTLWNASVNGH 197
H RE T+ + PRA A HA+N QHVI + G ++T+ NGH
Sbjct: 296 HRGAREFTVGRQVHNPPRARQSTGAYHALNSQHVIPALSQP-AGIYQTVGPYQSNGH 351
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,002,088
Number of Sequences: 37544
Number of extensions: 366743
Number of successful extensions: 1083
Number of sequences better than 10.0: 21
Number of HSP's better than 10.0 without gapping: 1053
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1083
length of database: 14,793,348
effective HSP length: 77
effective length of database: 11,902,460
effective search space used: 1118831240
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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