Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= epV30501
(516 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY180919-1|AAN87272.1| 884|Drosophila melanogaster ORF1 protein. 83 2e-16
AF456125-1|AAL57609.1| 832|Drosophila melanogaster reverse tran... 83 2e-16
M22874-2|AAA28675.1| 916|Drosophila melanogaster protein ( D.me... 76 2e-14
AY089343-1|AAL90081.2| 718|Drosophila melanogaster AT16518p pro... 76 2e-14
AM040243-1|CAJ13339.1| 656|Drosophila melanogaster pol protein ... 74 1e-13
AM040242-2|CAJ13338.1| 1103|Drosophila melanogaster pol protein ... 74 1e-13
AJ542582-2|CAD65871.1| 1103|Drosophila melanogaster pol protein ... 74 1e-13
AJ542581-2|CAD65869.1| 1103|Drosophila melanogaster pol protein ... 74 1e-13
AY060323-1|AAL25362.1| 241|Drosophila melanogaster GH20809p pro... 69 3e-12
U14101-2|AAC46494.1| 1084|Drosophila melanogaster putative rever... 68 7e-12
U02279-1|AAA18301.1| 964|Drosophila melanogaster protein ( Dros... 68 7e-12
AY600955-2|AAT12845.1| 1092|Drosophila melanogaster pol protein ... 68 7e-12
AY561850-2|AAS68534.1| 1080|Drosophila melanogaster pol protein ... 68 7e-12
AY035777-2|AAK77971.1| 1080|Drosophila melanogaster pol protein ... 68 7e-12
AM040245-1|CAJ13341.1| 1042|Drosophila melanogaster pol protein ... 68 7e-12
AJ566116-2|CAD92793.1| 1080|Drosophila melanogaster pol protein ... 68 7e-12
M17214-2|AAA28508.1| 858|Drosophila melanogaster protein ( D.me... 68 9e-12
AY060438-1|AAL25477.1| 906|Drosophila melanogaster LD46618p pro... 66 3e-11
X17551-2|CAA35587.1| 888|Drosophila melanogaster protein ( D.me... 65 5e-11
AF237761-2|AAF81411.1| 908|Drosophila melanogaster unknown prot... 64 1e-10
AY047531-1|AAK77263.1| 888|Drosophila melanogaster GH03753p pro... 63 2e-10
AJ302712-2|CAC16871.1| 1227|Drosophila melanogaster pol protein. 62 4e-10
M14954-2|AAA70222.2| 1219|Drosophila melanogaster putative ORF2 ... 61 8e-10
X51967-1|CAA36225.1| 1057|Drosophila melanogaster protein ( Dros... 54 9e-08
AJ278684-2|CAB99192.1| 989|Drosophila melanogaster endonuclease... 53 3e-07
X51968-2|CAA36227.1| 1021|Drosophila melanogaster protein ( Dros... 43 2e-04
AY071740-1|AAL49362.1| 184|Drosophila melanogaster RH47344p pro... 28 8.6
>AY180919-1|AAN87272.1| 884|Drosophila melanogaster ORF1 protein.
Length = 884
Score = 83.0 bits (196), Expect = 2e-16
Identities = 56/167 (33%), Positives = 83/167 (49%), Gaps = 2/167 (1%)
Frame = +2
Query: 2 EALXSKGEALAVSLDIAKAFDRVWHRALLSKLPSYGIPEGLCKWIASFLDGRSITVVVDG 181
E++ SK V+LDI AFD VWH LL KL G P L K + +FL R +V ++
Sbjct: 595 ESIQSKQSVGLVTLDIEAAFDTVWHDGLLHKLKMIGTPIYLIKIVQNFLTHRYFSVNLNS 654
Query: 182 DCSDTMTINAGVPQGSVLSPTLFILYINDMLSIDG--MHCYADDSTGDARYIGHQSLSRS 355
S +NAGVPQGSVL PTLF ++ +D+ + +ADD+ + S S
Sbjct: 655 SQSARRILNAGVPQGSVLGPTLFNIFTHDIPQATNCVLSLFADDAA-----VYSAGFSYS 709
Query: 356 VVQERRSKLVSEVENSLGRVSKWGESNLVQFNPLKTQVCAFTAKKDP 496
+ + ++E++ KW ++ NP KT FT ++ P
Sbjct: 710 EINQSMQSYLNELDI---YYKKW----KIKINPNKTNAIFFTKRRKP 749
>AF456125-1|AAL57609.1| 832|Drosophila melanogaster reverse
transcriptase protein.
Length = 832
Score = 83.0 bits (196), Expect = 2e-16
Identities = 56/167 (33%), Positives = 83/167 (49%), Gaps = 2/167 (1%)
Frame = +2
Query: 2 EALXSKGEALAVSLDIAKAFDRVWHRALLSKLPSYGIPEGLCKWIASFLDGRSITVVVDG 181
E++ SK V+LDI AFD VWH LL KL G P L K + +FL R +V ++
Sbjct: 543 ESIQSKQSVGLVTLDIEAAFDTVWHDGLLHKLKMIGTPIYLIKIVQNFLTHRYFSVNLNS 602
Query: 182 DCSDTMTINAGVPQGSVLSPTLFILYINDMLSIDG--MHCYADDSTGDARYIGHQSLSRS 355
S +NAGVPQGSVL PTLF ++ +D+ + +ADD+ + S S
Sbjct: 603 SQSARRILNAGVPQGSVLGPTLFNIFTHDIPQATNCVLSLFADDAA-----VYSAGFSYS 657
Query: 356 VVQERRSKLVSEVENSLGRVSKWGESNLVQFNPLKTQVCAFTAKKDP 496
+ + ++E++ KW ++ NP KT FT ++ P
Sbjct: 658 EINQSMQSYLNELDI---YYKKW----KIKINPNKTNAIFFTKRRKP 697
>M22874-2|AAA28675.1| 916|Drosophila melanogaster protein (
D.melanogaster LINEelement J-1, clone J-1. ).
Length = 916
Score = 76.2 bits (179), Expect = 2e-14
Identities = 43/90 (47%), Positives = 54/90 (60%)
Frame = +2
Query: 2 EALXSKGEALAVSLDIAKAFDRVWHRALLSKLPSYGIPEGLCKWIASFLDGRSITVVVDG 181
EA+ +K A+ LDI +AFDRVWH LL K P L + SFL+ R+ V VDG
Sbjct: 572 EAMENKEYAVGAFLDIQQAFDRVWHPGLLYKAKRL-FPPQLYLVVKSFLEERTFHVSVDG 630
Query: 182 DCSDTMTINAGVPQGSVLSPTLFILYINDM 271
S I AGVPQGSVL PTL+ ++ +DM
Sbjct: 631 YKSSIKPIAAGVPQGSVLGPTLYSVFASDM 660
>AY089343-1|AAL90081.2| 718|Drosophila melanogaster AT16518p
protein.
Length = 718
Score = 76.2 bits (179), Expect = 2e-14
Identities = 43/90 (47%), Positives = 54/90 (60%)
Frame = +2
Query: 2 EALXSKGEALAVSLDIAKAFDRVWHRALLSKLPSYGIPEGLCKWIASFLDGRSITVVVDG 181
EA+ +K A+ LDI +AFDRVWH LL K P L + SFL+ R+ V VDG
Sbjct: 374 EAMENKEYAVGAFLDIQQAFDRVWHPGLLYKAKRL-FPPQLYLVVKSFLEERTFHVSVDG 432
Query: 182 DCSDTMTINAGVPQGSVLSPTLFILYINDM 271
S I AGVPQGSVL PTL+ ++ +DM
Sbjct: 433 YKSSIKPIAAGVPQGSVLGPTLYSVFASDM 462
>AM040243-1|CAJ13339.1| 656|Drosophila melanogaster pol protein
protein.
Length = 656
Score = 73.7 bits (173), Expect = 1e-13
Identities = 40/91 (43%), Positives = 55/91 (60%), Gaps = 1/91 (1%)
Frame = +2
Query: 2 EALXSKGEALAVSLDIAKAFDRVWHRALLSKLPSYGIPEGLCKWIASFLDGRSITVVVDG 181
+A K A LDI +AFDRVWH LL KL S IP L + ++L R+ +V +DG
Sbjct: 171 KAFDEKDVCSATFLDITEAFDRVWHDGLLYKL-SRLIPRYLFDLLENYLSNRTFSVRIDG 229
Query: 182 DCSDTM-TINAGVPQGSVLSPTLFILYINDM 271
+ + + I AGVPQGS+L P L+ +Y +DM
Sbjct: 230 ETTSRIGNIRAGVPQGSILGPVLYSIYSSDM 260
>AM040242-2|CAJ13338.1| 1103|Drosophila melanogaster pol protein
protein.
Length = 1103
Score = 73.7 bits (173), Expect = 1e-13
Identities = 40/91 (43%), Positives = 55/91 (60%), Gaps = 1/91 (1%)
Frame = +2
Query: 2 EALXSKGEALAVSLDIAKAFDRVWHRALLSKLPSYGIPEGLCKWIASFLDGRSITVVVDG 181
+A K A LDI +AFDRVWH LL KL S IP L + ++L R+ +V +DG
Sbjct: 618 KAFDEKDVCSATFLDITEAFDRVWHDGLLYKL-SRLIPRYLFDLLENYLSNRTFSVRIDG 676
Query: 182 DCSDTM-TINAGVPQGSVLSPTLFILYINDM 271
+ + + I AGVPQGS+L P L+ +Y +DM
Sbjct: 677 ETTSRIGNIRAGVPQGSILGPVLYSIYSSDM 707
>AJ542582-2|CAD65871.1| 1103|Drosophila melanogaster pol protein
protein.
Length = 1103
Score = 73.7 bits (173), Expect = 1e-13
Identities = 40/91 (43%), Positives = 55/91 (60%), Gaps = 1/91 (1%)
Frame = +2
Query: 2 EALXSKGEALAVSLDIAKAFDRVWHRALLSKLPSYGIPEGLCKWIASFLDGRSITVVVDG 181
+A K A LDI +AFDRVWH LL KL S IP L + ++L R+ +V +DG
Sbjct: 618 KAFDEKDVCSATFLDITEAFDRVWHDGLLYKL-SRLIPRYLFDLLENYLSNRTFSVRIDG 676
Query: 182 DCSDTM-TINAGVPQGSVLSPTLFILYINDM 271
+ + + I AGVPQGS+L P L+ +Y +DM
Sbjct: 677 ETTSRIGNIRAGVPQGSILGPVLYSIYSSDM 707
>AJ542581-2|CAD65869.1| 1103|Drosophila melanogaster pol protein
protein.
Length = 1103
Score = 73.7 bits (173), Expect = 1e-13
Identities = 40/91 (43%), Positives = 55/91 (60%), Gaps = 1/91 (1%)
Frame = +2
Query: 2 EALXSKGEALAVSLDIAKAFDRVWHRALLSKLPSYGIPEGLCKWIASFLDGRSITVVVDG 181
+A K A LDI +AFDRVWH LL KL S IP L + ++L R+ +V +DG
Sbjct: 618 KAFDEKDVCSATFLDITEAFDRVWHDGLLYKL-SRLIPRYLFDLLENYLSNRTFSVRIDG 676
Query: 182 DCSDTM-TINAGVPQGSVLSPTLFILYINDM 271
+ + + I AGVPQGS+L P L+ +Y +DM
Sbjct: 677 ETTSRIGNIRAGVPQGSILGPVLYSIYSSDM 707
>AY060323-1|AAL25362.1| 241|Drosophila melanogaster GH20809p
protein.
Length = 241
Score = 69.3 bits (162), Expect = 3e-12
Identities = 36/80 (45%), Positives = 48/80 (60%)
Frame = +2
Query: 32 AVSLDIAKAFDRVWHRALLSKLPSYGIPEGLCKWIASFLDGRSITVVVDGDCSDTMTINA 211
A+ LD+A+AFDRVW L+ K+ +P+ + K + S+LD R V S TI A
Sbjct: 117 ALFLDVAQAFDRVWLDGLMFKIIQL-LPQNIHKLLKSYLDKRVFAVRCSSSTSSDFTIEA 175
Query: 212 GVPQGSVLSPTLFILYINDM 271
GVPQGSVL P L+ LY D+
Sbjct: 176 GVPQGSVLGPILYTLYTADI 195
>U14101-2|AAC46494.1| 1084|Drosophila melanogaster putative reverse
transcriptase protein.
Length = 1084
Score = 68.1 bits (159), Expect = 7e-12
Identities = 55/166 (33%), Positives = 75/166 (45%), Gaps = 2/166 (1%)
Frame = +2
Query: 2 EALXSKGEALAVSLDIAKAFDRVWHRALLSKLPSYGIPEGLCKWIASFLDGRSITVVVD- 178
EA K AV LDI++AFDRVWH LL KL +P L + S+L R+ V
Sbjct: 615 EAFERKEYCSAVFLDISEAFDRVWHEGLLLKLAKI-LPYNLYIILESYLTNRTFEVKDQA 673
Query: 179 GDCSDTMTINAGVPQGSVLSPTLFILYINDMLSIDGMHCYADDSTGDARYIGHQSLSRSV 358
G+ S T I AGVPQGS L P L+ ++ +DM + Y T + + +
Sbjct: 674 GETSRTGQIGAGVPQGSNLGPLLYSIFSSDM---PLPYIYRPSPTERIMLSTYADDTIVL 730
Query: 359 VQERRSKLVS-EVENSLGRVSKWGESNLVQFNPLKTQVCAFTAKKD 493
+ + + EN L S W + + N KT FT K D
Sbjct: 731 SSDTLATAATRNNENYLKSFSDWADKWGISVNAAKTGHVIFTLKND 776
>U02279-1|AAA18301.1| 964|Drosophila melanogaster protein (
Drosophila melanogastertelomere-associated transposons
TART, TART-A and HeT-A,and TART-A ORF2 gene, partial
cds. ).
Length = 964
Score = 68.1 bits (159), Expect = 7e-12
Identities = 54/165 (32%), Positives = 73/165 (44%), Gaps = 1/165 (0%)
Frame = +2
Query: 2 EALXSKGEALAVSLDIAKAFDRVWHRALLSKLPSYGIPEGLCKWIASFLDGRSITVVVD- 178
EA K AV LDI++AFDRVWH LL KL +P L + S+L R+ V
Sbjct: 499 EAFERKEYCSAVFLDISEAFDRVWHEGLLLKLAKI-LPYNLYIILESYLTNRTFEVKDQA 557
Query: 179 GDCSDTMTINAGVPQGSVLSPTLFILYINDMLSIDGMHCYADDSTGDARYIGHQSLSRSV 358
G+ S I AGVPQGS L P L+ ++ +DM H + + Y + S
Sbjct: 558 GETSRAGQIGAGVPQGSNLGPILYSIFSSDMPLPHIYHPSPTERIMLSTYADDTIVLSSD 617
Query: 359 VQERRSKLVSEVENSLGRVSKWGESNLVQFNPLKTQVCAFTAKKD 493
+ + EN L S W + + N KT +T K D
Sbjct: 618 I--LATAATRNNENYLKTFSDWADKWGISVNAAKTGHVIYTLKND 660
>AY600955-2|AAT12845.1| 1092|Drosophila melanogaster pol protein
protein.
Length = 1092
Score = 68.1 bits (159), Expect = 7e-12
Identities = 55/166 (33%), Positives = 75/166 (45%), Gaps = 2/166 (1%)
Frame = +2
Query: 2 EALXSKGEALAVSLDIAKAFDRVWHRALLSKLPSYGIPEGLCKWIASFLDGRSITVVVD- 178
EA K AV LDI++AFDRVWH LL KL +P L + S+L R+ V
Sbjct: 627 EAFERKEYCSAVFLDISEAFDRVWHEGLLLKLAKI-LPYNLYIILESYLTNRTFEVKDQA 685
Query: 179 GDCSDTMTINAGVPQGSVLSPTLFILYINDMLSIDGMHCYADDSTGDARYIGHQSLSRSV 358
G+ S T I AGVPQGS L P L+ ++ +DM + Y T + + +
Sbjct: 686 GETSRTGQIGAGVPQGSNLGPLLYSIFSSDM---PLPYIYRPSPTQRIMLSTYADDTIVL 742
Query: 359 VQERRSKLVS-EVENSLGRVSKWGESNLVQFNPLKTQVCAFTAKKD 493
+ + + EN L S W + + N KT FT K D
Sbjct: 743 SSDTLATAATRNNENYLKTFSDWADKWGISVNAAKTGHVIFTLKND 788
>AY561850-2|AAS68534.1| 1080|Drosophila melanogaster pol protein
protein.
Length = 1080
Score = 68.1 bits (159), Expect = 7e-12
Identities = 54/165 (32%), Positives = 73/165 (44%), Gaps = 1/165 (0%)
Frame = +2
Query: 2 EALXSKGEALAVSLDIAKAFDRVWHRALLSKLPSYGIPEGLCKWIASFLDGRSITVVVD- 178
EA K AV LDI++AFDRVWH LL KL +P L + S+L R+ V
Sbjct: 615 EAFERKEYCSAVFLDISEAFDRVWHEGLLLKLAKI-LPYNLYIILESYLTNRTFEVKDQA 673
Query: 179 GDCSDTMTINAGVPQGSVLSPTLFILYINDMLSIDGMHCYADDSTGDARYIGHQSLSRSV 358
G+ S I AGVPQGS L P L+ ++ +DM H + + Y + S
Sbjct: 674 GETSRAGQIGAGVPQGSNLGPILYSIFSSDMPLPHIYHPSPTERIMLSTYADDTIVLSSD 733
Query: 359 VQERRSKLVSEVENSLGRVSKWGESNLVQFNPLKTQVCAFTAKKD 493
+ + EN L S W + + N KT +T K D
Sbjct: 734 I--LATAATRNNENYLKTFSDWADKWGISVNAAKTGHVIYTLKND 776
>AY035777-2|AAK77971.1| 1080|Drosophila melanogaster pol protein
protein.
Length = 1080
Score = 68.1 bits (159), Expect = 7e-12
Identities = 54/165 (32%), Positives = 73/165 (44%), Gaps = 1/165 (0%)
Frame = +2
Query: 2 EALXSKGEALAVSLDIAKAFDRVWHRALLSKLPSYGIPEGLCKWIASFLDGRSITVVVD- 178
EA K AV LDI++AFDRVWH LL KL +P L + S+L R+ V
Sbjct: 615 EAFERKEYCSAVFLDISEAFDRVWHEGLLLKLAKI-LPYNLYIILESYLTNRTFEVKDQA 673
Query: 179 GDCSDTMTINAGVPQGSVLSPTLFILYINDMLSIDGMHCYADDSTGDARYIGHQSLSRSV 358
G+ S I AGVPQGS L P L+ ++ +DM H + + Y + S
Sbjct: 674 GETSRAGQIGAGVPQGSNLGPILYSIFSSDMPLPHIYHPSPTERIMLSTYADDTIVLSSD 733
Query: 359 VQERRSKLVSEVENSLGRVSKWGESNLVQFNPLKTQVCAFTAKKD 493
+ + EN L S W + + N KT +T K D
Sbjct: 734 I--LATAATRNNENYLKTFSDWADKWGISVNAAKTGHVIYTLKND 776
>AM040245-1|CAJ13341.1| 1042|Drosophila melanogaster pol protein
protein.
Length = 1042
Score = 68.1 bits (159), Expect = 7e-12
Identities = 54/165 (32%), Positives = 73/165 (44%), Gaps = 1/165 (0%)
Frame = +2
Query: 2 EALXSKGEALAVSLDIAKAFDRVWHRALLSKLPSYGIPEGLCKWIASFLDGRSITVVVD- 178
EA K AV LDI++AFDRVWH LL KL +P L + S+L R+ V
Sbjct: 577 EAFERKEYCSAVFLDISEAFDRVWHEGLLLKLAKI-LPYNLYIILESYLTNRTFEVKDQA 635
Query: 179 GDCSDTMTINAGVPQGSVLSPTLFILYINDMLSIDGMHCYADDSTGDARYIGHQSLSRSV 358
G+ S I AGVPQGS L P L+ ++ +DM H + + Y + S
Sbjct: 636 GETSRAGQIGAGVPQGSNLGPILYSIFSSDMPLPHIYHPSPTERIMLSTYADDTIVLSSD 695
Query: 359 VQERRSKLVSEVENSLGRVSKWGESNLVQFNPLKTQVCAFTAKKD 493
+ + EN L S W + + N KT +T K D
Sbjct: 696 I--LATAATRNNENYLKTFSDWADKWGISVNAAKTGHVIYTLKND 738
>AJ566116-2|CAD92793.1| 1080|Drosophila melanogaster pol protein
protein.
Length = 1080
Score = 68.1 bits (159), Expect = 7e-12
Identities = 54/165 (32%), Positives = 73/165 (44%), Gaps = 1/165 (0%)
Frame = +2
Query: 2 EALXSKGEALAVSLDIAKAFDRVWHRALLSKLPSYGIPEGLCKWIASFLDGRSITVVVD- 178
EA K AV LDI++AFDRVWH LL KL +P L + S+L R+ V
Sbjct: 615 EAFERKEYCSAVFLDISEAFDRVWHEGLLLKLAKI-LPYNLYIILESYLTNRTFEVKDQA 673
Query: 179 GDCSDTMTINAGVPQGSVLSPTLFILYINDMLSIDGMHCYADDSTGDARYIGHQSLSRSV 358
G+ S I AGVPQGS L P L+ ++ +DM H + + Y + S
Sbjct: 674 GETSRAGQIGAGVPQGSNLGPILYSIFSSDMPLPHIYHPSPTERIMLSTYADDTIVLSSD 733
Query: 359 VQERRSKLVSEVENSLGRVSKWGESNLVQFNPLKTQVCAFTAKKD 493
+ + EN L S W + + N KT +T K D
Sbjct: 734 I--LATAATRNNENYLKTFSDWADKWGISVNAAKTGHVIYTLKND 776
>M17214-2|AAA28508.1| 858|Drosophila melanogaster protein (
D.melanogaster Fw repetitiveelement putative reverse
transcriptase, complete cds,and putative binding
protein, 3' end. ).
Length = 858
Score = 67.7 bits (158), Expect = 9e-12
Identities = 35/80 (43%), Positives = 49/80 (61%)
Frame = +2
Query: 32 AVSLDIAKAFDRVWHRALLSKLPSYGIPEGLCKWIASFLDGRSITVVVDGDCSDTMTINA 211
AV LD+++AFD+VW L+ K+ +PE K + S+L R V + S TI A
Sbjct: 578 AVFLDVSQAFDKVWLDGLMFKI-KISLPESTHKLLKSYLYDRKFAVRCNTATSTVHTIEA 636
Query: 212 GVPQGSVLSPTLFILYINDM 271
GVPQGSVL PTL+++Y D+
Sbjct: 637 GVPQGSVLGPTLYLIYTADI 656
>AY060438-1|AAL25477.1| 906|Drosophila melanogaster LD46618p protein.
Length = 906
Score = 66.1 bits (154), Expect = 3e-11
Identities = 51/170 (30%), Positives = 77/170 (45%)
Frame = +2
Query: 2 EALXSKGEALAVSLDIAKAFDRVWHRALLSKLPSYGIPEGLCKWIASFLDGRSITVVVDG 181
+A K AV +D+ +AFDRVWH L+SK+ P + S+L+ R V V
Sbjct: 571 QAFDDKEYCNAVFIDMQQAFDRVWHDGLISKVKKL-FPAPYYGVLKSYLEDRRFMVRVRN 629
Query: 182 DCSDTMTINAGVPQGSVLSPTLFILYINDMLSIDGMHCYADDSTGDARYIGHQSLSRSVV 361
S + AGVPQGSVL P L+ ++ D+ + H A Y +L S
Sbjct: 630 SYSIPRVMRAGVPQGSVLGPLLYSVFTADLPCPNAYHMADPRKALLATYADDIALLYS-- 687
Query: 362 QERRSKLVSEVENSLGRVSKWGESNLVQFNPLKTQVCAFTAKKDPFVMAP 511
++ ++ L ++ W + +++ NP KT FT K V AP
Sbjct: 688 SNCCNEAARGLQEYLTTLAAWCKRWILKVNPQKTINPCFTLKTLSPVTAP 737
>X17551-2|CAA35587.1| 888|Drosophila melanogaster protein (
D.melanogaster white-one mutant DNA with Doc retroposon,
inserted inwhite locuspromoter region. ).
Length = 888
Score = 65.3 bits (152), Expect = 5e-11
Identities = 54/156 (34%), Positives = 72/156 (46%), Gaps = 3/156 (1%)
Frame = +2
Query: 32 AVSLDIAKAFDRVWHRALLSKLPSYGIPEGLCKWIASFLDGRSITVVVDGDCSDTMTINA 211
A+ LD+A+AFDRVW LL K+ +P+ K + S+L R + D S I A
Sbjct: 576 AIFLDVAQAFDRVWLDGLLFKIIKL-LPQNTHKLLKSYLYNRVFAIRCDTSTSRDCAIEA 634
Query: 212 GVPQGSVLSPTLFILYINDMLSID---GMHCYADDSTGDARYIGHQSLSRSVVQERRSKL 382
GVPQGSVL P L+ LY D ID +ADD+ LSRS + + L
Sbjct: 635 GVPQGSVLGPILYTLYTAD-FPIDYNLTTSTFADDTA---------ILSRSKCPIKATAL 684
Query: 383 VSEVENSLGRVSKWGESNLVQFNPLKTQVCAFTAKK 490
+S L V +W + N K + FT K
Sbjct: 685 LS---RHLTSVERWLADWRISINVQKCKQVTFTLNK 717
>AF237761-2|AAF81411.1| 908|Drosophila melanogaster unknown
protein.
Length = 908
Score = 64.1 bits (149), Expect = 1e-10
Identities = 37/89 (41%), Positives = 48/89 (53%)
Frame = +2
Query: 5 ALXSKGEALAVSLDIAKAFDRVWHRALLSKLPSYGIPEGLCKWIASFLDGRSITVVVDGD 184
A SK ++ LDI +AFDRVWH L K+ +P + S+L+GR V
Sbjct: 571 AYDSKEYCNSLFLDIREAFDRVWHIGLQLKIKQT-LPAPYFGLLKSYLEGRRFAVRFHSA 629
Query: 185 CSDTMTINAGVPQGSVLSPTLFILYINDM 271
S + AGVPQGSVL P L+ LY +DM
Sbjct: 630 ISTEHNVAAGVPQGSVLGPLLYCLYSHDM 658
>AY047531-1|AAK77263.1| 888|Drosophila melanogaster GH03753p protein.
Length = 888
Score = 62.9 bits (146), Expect = 2e-10
Identities = 53/156 (33%), Positives = 71/156 (45%), Gaps = 3/156 (1%)
Frame = +2
Query: 32 AVSLDIAKAFDRVWHRALLSKLPSYGIPEGLCKWIASFLDGRSITVVVDGDCSDTMTINA 211
A+ LD+A+AFDRVW LL K+ +P+ K + S+L + D S I A
Sbjct: 576 AIFLDVAQAFDRVWLDGLLFKIIKL-LPQNTHKLLKSYLYNTVFAIRCDTSTSRDCAIEA 634
Query: 212 GVPQGSVLSPTLFILYINDMLSID---GMHCYADDSTGDARYIGHQSLSRSVVQERRSKL 382
GVPQGSVL P L+ LY D ID +ADD+ LSRS + + L
Sbjct: 635 GVPQGSVLGPILYTLYTAD-FPIDYNLTTSTFADDTA---------ILSRSKCPIKATAL 684
Query: 383 VSEVENSLGRVSKWGESNLVQFNPLKTQVCAFTAKK 490
+S L V +W + N K + FT K
Sbjct: 685 LS---RHLTSVERWLADWRISINVQKCKQVTFTLNK 717
>AJ302712-2|CAC16871.1| 1227|Drosophila melanogaster pol protein.
Length = 1227
Score = 62.1 bits (144), Expect = 4e-10
Identities = 45/140 (32%), Positives = 73/140 (52%), Gaps = 2/140 (1%)
Frame = +2
Query: 5 ALXSKGEALAVSLDIAKAFDRVWHRALLSKLPSYGIPEGLCKWIASFLDGRSITVVVDGD 184
AL +K ++ D +AFDRV A+L +L +GI L I +F+ RS V ++
Sbjct: 571 ALSTKNHVSILATDFERAFDRVGIHAVLCRLERWGIGPRLYNLIKAFMTNRSFRVRINNV 630
Query: 185 CSDTMTINAGVPQGSVLSPTLFILYINDMLSIDGMH--CYADDSTGDARYIGHQSLSRSV 358
S++ ++ G+PQGS LS LF++ I D+ I H Y DA I + + +
Sbjct: 631 TSNSHILHNGIPQGSPLSVVLFMIAIEDINDIVTRHKDIYISLYADDA-IIFTKIKNINT 689
Query: 359 VQERRSKLVSEVENSLGRVS 418
V+E+ +++ E+ NS G S
Sbjct: 690 VREKFLEILQEI-NSWGATS 708
>M14954-2|AAA70222.2| 1219|Drosophila melanogaster putative ORF2
protein.
Length = 1219
Score = 61.3 bits (142), Expect = 8e-10
Identities = 35/104 (33%), Positives = 56/104 (53%), Gaps = 6/104 (5%)
Frame = +2
Query: 14 SKGEALAVSLDIAKAFDRVWHRALLSKLPSYGIPEGLCKWIASFLDGRSITVVVDGDCSD 193
SK V+LD ++AFDRV +++ +L + + K+I +F+ R ITV V S
Sbjct: 566 SKMHTSLVTLDFSRAFDRVGVHSIIQQLQEWKTGPKIIKYIKNFMSNRKITVRVGPHTSS 625
Query: 194 TMTINAGVPQGSVLSPTLFILYINDMLSIDGMH------CYADD 307
+ + G+PQGS +S LF++ N + +I +H YADD
Sbjct: 626 PLPLFNGIPQGSPISVILFLIAFNKLSNIISLHKEIKFNAYADD 669
>X51967-1|CAA36225.1| 1057|Drosophila melanogaster protein (
Drosophila melanogasterDNA for type II retrotransposable
element R2Dm. ).
Length = 1057
Score = 54.4 bits (125), Expect = 9e-08
Identities = 27/79 (34%), Positives = 45/79 (56%)
Frame = +2
Query: 38 SLDIAKAFDRVWHRALLSKLPSYGIPEGLCKWIASFLDGRSITVVVDGDCSDTMTINAGV 217
+LD++KAFD + H ++ L +YG P+G ++ + +G ++ DG S+ GV
Sbjct: 480 NLDVSKAFDSLSHASIYDTLRAYGAPKGFVDYVQNTYEGGGTSLNGDGWSSEEFVPARGV 539
Query: 218 PQGSVLSPTLFILYINDML 274
QG LSP LF L ++ +L
Sbjct: 540 KQGDPLSPILFNLVMDRLL 558
>AJ278684-2|CAB99192.1| 989|Drosophila melanogaster
endonuclease/reverse transcriptase protein.
Length = 989
Score = 52.8 bits (121), Expect = 3e-07
Identities = 32/103 (31%), Positives = 55/103 (53%), Gaps = 5/103 (4%)
Frame = +2
Query: 14 SKGEALAVSLDIAKAFDRVWHRALLSKLPSYGIPEGLCKWIASFLDGRSITVVVDGDCSD 193
SK ++LD+ AF+ +L + + G+P+ + I ++ R + V + D
Sbjct: 547 SKKYCAIITLDVKNAFNTARWPIILGAMRNLGVPDYIRGVIGNYFRDRVLWYVTE-DGPR 605
Query: 194 TMTINAGVPQGSVLSPTLFILYINDMLSID-----GMHCYADD 307
+ ++AGVPQGSVL P L+ + + +LSI +HC+ADD
Sbjct: 606 SHQVSAGVPQGSVLGPILWNIMYDGILSISKPRGVELHCFADD 648
>X51968-2|CAA36227.1| 1021|Drosophila melanogaster protein (
Drosophila melanogasterDNA for type I retrotransposable
element R1Dm. ).
Length = 1021
Score = 43.2 bits (97), Expect = 2e-04
Identities = 35/123 (28%), Positives = 59/123 (47%)
Frame = +2
Query: 29 LAVSLDIAKAFDRVWHRALLSKLPSYGIPEGLCKWIASFLDGRSITVVVDGDCSDTMTIN 208
L +D AFD V A LS+L G E + W SF GR V+ + + +
Sbjct: 573 LGTFVDFKGAFDNVEWSAALSRLADLGCRE-MGLW-QSFFSGRR-AVIRSSSGTVEVPVT 629
Query: 209 AGVPQGSVLSPTLFILYINDMLSIDGMHCYADDSTGDARYIGHQSLSRSVVQERRSKLVS 388
G PQGS+ P ++ + ++ +L +C D + + SR+V++E+ ++L+S
Sbjct: 630 RGCPQGSISGPFIWDILMDVLLQRLQPYCQLSAYADDLLLL-VEGNSRAVLEEKGAQLMS 688
Query: 389 EVE 397
VE
Sbjct: 689 IVE 691
>AY071740-1|AAL49362.1| 184|Drosophila melanogaster RH47344p
protein.
Length = 184
Score = 27.9 bits (59), Expect = 8.6
Identities = 22/97 (22%), Positives = 41/97 (42%), Gaps = 1/97 (1%)
Frame = +2
Query: 203 INAGVPQGSVLSPTLFILYINDMLSIDGMHCYADDSTGDARYIGH-QSLSRSVVQERRSK 379
+ GVPQGSVL P L+ + +L + G + +G ++ VV + K
Sbjct: 47 VTGGVPQGSVLGPLLWNTMYDGILRL--------PLVGRSEIVGFADDVALLVVDKYPGK 98
Query: 380 LVSEVENSLGRVSKWGESNLVQFNPLKTQVCAFTAKK 490
++ + W S ++ P KT+ +++K
Sbjct: 99 AEEMCNRNIRAIEHWLSSMGLELAPEKTKAVLISSRK 135
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 25,699,650
Number of Sequences: 53049
Number of extensions: 588477
Number of successful extensions: 1699
Number of sequences better than 10.0: 27
Number of HSP's better than 10.0 without gapping: 1611
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1678
length of database: 24,988,368
effective HSP length: 80
effective length of database: 20,744,448
effective search space used: 1887744768
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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