Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= epV30495
(516 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z81584-5|CAB04675.1| 376|Caenorhabditis elegans Hypothetical pr... 363 e-101
X16797-1|CAA34718.1| 376|Caenorhabditis elegans actin protein. 363 e-101
Z81584-6|CAB04678.1| 376|Caenorhabditis elegans Hypothetical pr... 363 e-101
Z81584-4|CAB04676.1| 376|Caenorhabditis elegans Hypothetical pr... 363 e-101
X16799-1|CAA34720.1| 376|Caenorhabditis elegans actin protein. 363 e-101
X16798-1|CAA34719.1| 375|Caenorhabditis elegans actin protein. 363 e-101
X16796-1|CAA34717.1| 376|Caenorhabditis elegans actin protein. 363 e-101
U64601-6|AAT92068.1| 362|Caenorhabditis elegans Actin protein 4... 363 e-101
U64601-5|AAB04575.1| 376|Caenorhabditis elegans Actin protein 4... 363 e-101
Z83241-1|CAB05817.1| 375|Caenorhabditis elegans Hypothetical pr... 355 1e-98
U64601-7|AAK77622.1| 332|Caenorhabditis elegans Actin protein 4... 314 3e-86
AL132949-19|CAB70110.2| 374|Caenorhabditis elegans Hypothetical... 231 2e-61
Z71181-1|CAA94894.1| 395|Caenorhabditis elegans Hypothetical pr... 192 1e-49
AC024200-9|AAF36012.1| 425|Caenorhabditis elegans Arp2/3 comple... 147 4e-36
J01046-1|AAA27890.1| 86|Caenorhabditis elegans protein ( C.ele... 142 1e-34
J01044-1|AAA27889.1| 86|Caenorhabditis elegans protein ( C.ele... 142 1e-34
J01042-1|AAA27887.1| 86|Caenorhabditis elegans protein ( C.ele... 142 1e-34
J01043-1|AAA27888.1| 83|Caenorhabditis elegans protein ( C.ele... 137 5e-33
AC006833-3|AAF60947.2| 436|Caenorhabditis elegans Hypothetical ... 115 2e-26
Z46676-5|CAA86667.3| 418|Caenorhabditis elegans Hypothetical pr... 55 3e-08
U24189-2|AAC47513.1| 418|Caenorhabditis elegans actin-related p... 55 3e-08
U40799-8|AAA81487.1| 552|Caenorhabditis elegans Hypothetical pr... 51 6e-07
U80439-8|AAB37646.3| 1724|Caenorhabditis elegans Hypothetical pr... 32 0.28
U97193-7|AAK68163.1| 299|Caenorhabditis elegans Yeast sir relat... 31 0.37
Z46791-5|CAA86755.2| 948|Caenorhabditis elegans Hypothetical pr... 29 2.6
Z22964-2|CAA80537.1| 1759|Caenorhabditis elegans a2(IV) collagen... 29 2.6
Z22964-1|CAA80536.1| 1758|Caenorhabditis elegans a2(IV) collagen... 29 2.6
U53342-4|AAA96216.1| 1758|Caenorhabditis elegans Lethal protein ... 29 2.6
U53342-3|AAA96215.1| 1759|Caenorhabditis elegans Lethal protein ... 29 2.6
U22327-1|AAA64312.1| 1795|Caenorhabditis elegans alpha2(IV) coll... 29 2.6
U53155-5|AAC48270.1| 303|Caenorhabditis elegans Collagen protei... 28 3.4
U12966-7|AAK84534.1| 352|Caenorhabditis elegans Dumpy : shorter... 28 3.4
AB072926-1|BAB69889.1| 303|Caenorhabditis elegans collagen prot... 28 3.4
Z72507-3|CAA96625.1| 337|Caenorhabditis elegans Hypothetical pr... 28 4.6
AF000198-7|AAB53052.1| 418|Caenorhabditis elegans Collagen prot... 28 4.6
Z79694-1|CAB01959.1| 303|Caenorhabditis elegans Hypothetical pr... 27 6.0
M25479-1|AAA27993.1| 282|Caenorhabditis elegans collagen protein. 27 6.0
Z81458-5|CAB03825.2| 252|Caenorhabditis elegans Hypothetical pr... 27 8.0
Z78543-5|CAH10796.1| 1453|Caenorhabditis elegans Hypothetical pr... 27 8.0
Z78543-4|CAB01754.1| 1785|Caenorhabditis elegans Hypothetical pr... 27 8.0
Z78543-3|CAB01755.2| 772|Caenorhabditis elegans Hypothetical pr... 27 8.0
Z72514-1|CAA96674.1| 428|Caenorhabditis elegans Hypothetical pr... 27 8.0
Z70208-1|CAA94141.1| 339|Caenorhabditis elegans Hypothetical pr... 27 8.0
Z27078-7|CAE52901.2| 1502|Caenorhabditis elegans Hypothetical pr... 27 8.0
Z27078-6|CAA81584.4| 1759|Caenorhabditis elegans Hypothetical pr... 27 8.0
X56979-1|CAA40299.1| 1758|Caenorhabditis elegans alpha1(IV) coll... 27 8.0
U58736-1|AAB00598.1| 302|Caenorhabditis elegans Dumpy : shorter... 27 8.0
AF067616-11|AAC19194.2| 627|Caenorhabditis elegans Collagen pro... 27 8.0
AF022985-12|AAB69959.1| 319|Caenorhabditis elegans Collagen pro... 27 8.0
AF022985-10|AAB69961.1| 325|Caenorhabditis elegans Collagen pro... 27 8.0
>Z81584-5|CAB04675.1| 376|Caenorhabditis elegans Hypothetical
protein T04C12.5 protein.
Length = 376
Score = 363 bits (894), Expect = e-101
Identities = 168/171 (98%), Positives = 171/171 (100%)
Frame = +2
Query: 2 FAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIITNWD 181
FAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGI+TNWD
Sbjct: 22 FAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWD 81
Query: 182 DMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNSPAMYVAIQAVL 361
DMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFN+PAMYVAIQAVL
Sbjct: 82 DMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVL 141
Query: 362 SLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDYLMK 514
SLYASGRTTGIVLDSGDGV+HTVPIYEGYALPHAILRLDLAGRDLTDYLMK
Sbjct: 142 SLYASGRTTGIVLDSGDGVTHTVPIYEGYALPHAILRLDLAGRDLTDYLMK 192
>X16797-1|CAA34718.1| 376|Caenorhabditis elegans actin protein.
Length = 376
Score = 363 bits (894), Expect = e-101
Identities = 168/171 (98%), Positives = 171/171 (100%)
Frame = +2
Query: 2 FAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIITNWD 181
FAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGI+TNWD
Sbjct: 22 FAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWD 81
Query: 182 DMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNSPAMYVAIQAVL 361
DMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFN+PAMYVAIQAVL
Sbjct: 82 DMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVL 141
Query: 362 SLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDYLMK 514
SLYASGRTTGIVLDSGDGV+HTVPIYEGYALPHAILRLDLAGRDLTDYLMK
Sbjct: 142 SLYASGRTTGIVLDSGDGVTHTVPIYEGYALPHAILRLDLAGRDLTDYLMK 192
>Z81584-6|CAB04678.1| 376|Caenorhabditis elegans Hypothetical
protein T04C12.6 protein.
Length = 376
Score = 363 bits (893), Expect = e-101
Identities = 167/171 (97%), Positives = 171/171 (100%)
Frame = +2
Query: 2 FAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIITNWD 181
FAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGI+TNWD
Sbjct: 22 FAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWD 81
Query: 182 DMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNSPAMYVAIQAVL 361
DMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFN+PAMYVAIQAVL
Sbjct: 82 DMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVL 141
Query: 362 SLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDYLMK 514
SLYASGRTTG+VLDSGDGV+HTVPIYEGYALPHAILRLDLAGRDLTDYLMK
Sbjct: 142 SLYASGRTTGVVLDSGDGVTHTVPIYEGYALPHAILRLDLAGRDLTDYLMK 192
>Z81584-4|CAB04676.1| 376|Caenorhabditis elegans Hypothetical
protein T04C12.4 protein.
Length = 376
Score = 363 bits (893), Expect = e-101
Identities = 167/171 (97%), Positives = 171/171 (100%)
Frame = +2
Query: 2 FAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIITNWD 181
FAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGI+TNWD
Sbjct: 22 FAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWD 81
Query: 182 DMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNSPAMYVAIQAVL 361
DMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFN+PAMYVAIQAVL
Sbjct: 82 DMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVL 141
Query: 362 SLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDYLMK 514
SLYASGRTTG+VLDSGDGV+HTVPIYEGYALPHAILRLDLAGRDLTDYLMK
Sbjct: 142 SLYASGRTTGVVLDSGDGVTHTVPIYEGYALPHAILRLDLAGRDLTDYLMK 192
>X16799-1|CAA34720.1| 376|Caenorhabditis elegans actin protein.
Length = 376
Score = 363 bits (893), Expect = e-101
Identities = 167/171 (97%), Positives = 171/171 (100%)
Frame = +2
Query: 2 FAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIITNWD 181
FAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGI+TNWD
Sbjct: 22 FAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWD 81
Query: 182 DMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNSPAMYVAIQAVL 361
DMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFN+PAMYVAIQAVL
Sbjct: 82 DMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVL 141
Query: 362 SLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDYLMK 514
SLYASGRTTG+VLDSGDGV+HTVPIYEGYALPHAILRLDLAGRDLTDYLMK
Sbjct: 142 SLYASGRTTGVVLDSGDGVTHTVPIYEGYALPHAILRLDLAGRDLTDYLMK 192
>X16798-1|CAA34719.1| 375|Caenorhabditis elegans actin protein.
Length = 375
Score = 363 bits (893), Expect = e-101
Identities = 167/171 (97%), Positives = 171/171 (100%)
Frame = +2
Query: 2 FAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIITNWD 181
FAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGI+TNWD
Sbjct: 22 FAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWD 81
Query: 182 DMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNSPAMYVAIQAVL 361
DMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFN+PAMYVAIQAVL
Sbjct: 82 DMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVL 141
Query: 362 SLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDYLMK 514
SLYASGRTTG+VLDSGDGV+HTVPIYEGYALPHAILRLDLAGRDLTDYLMK
Sbjct: 142 SLYASGRTTGVVLDSGDGVTHTVPIYEGYALPHAILRLDLAGRDLTDYLMK 192
>X16796-1|CAA34717.1| 376|Caenorhabditis elegans actin protein.
Length = 376
Score = 363 bits (893), Expect = e-101
Identities = 167/171 (97%), Positives = 171/171 (100%)
Frame = +2
Query: 2 FAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIITNWD 181
FAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGI+TNWD
Sbjct: 22 FAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWD 81
Query: 182 DMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNSPAMYVAIQAVL 361
DMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFN+PAMYVAIQAVL
Sbjct: 82 DMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVL 141
Query: 362 SLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDYLMK 514
SLYASGRTTG+VLDSGDGV+HTVPIYEGYALPHAILRLDLAGRDLTDYLMK
Sbjct: 142 SLYASGRTTGVVLDSGDGVTHTVPIYEGYALPHAILRLDLAGRDLTDYLMK 192
>U64601-6|AAT92068.1| 362|Caenorhabditis elegans Actin protein 4,
isoform c protein.
Length = 362
Score = 363 bits (893), Expect = e-101
Identities = 167/171 (97%), Positives = 171/171 (100%)
Frame = +2
Query: 2 FAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIITNWD 181
FAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGI+TNWD
Sbjct: 8 FAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWD 67
Query: 182 DMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNSPAMYVAIQAVL 361
DMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFN+PAMYVAIQAVL
Sbjct: 68 DMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVL 127
Query: 362 SLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDYLMK 514
SLYASGRTTG+VLDSGDGV+HTVPIYEGYALPHAILRLDLAGRDLTDYLMK
Sbjct: 128 SLYASGRTTGVVLDSGDGVTHTVPIYEGYALPHAILRLDLAGRDLTDYLMK 178
>U64601-5|AAB04575.1| 376|Caenorhabditis elegans Actin protein 4,
isoform a protein.
Length = 376
Score = 363 bits (893), Expect = e-101
Identities = 167/171 (97%), Positives = 171/171 (100%)
Frame = +2
Query: 2 FAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIITNWD 181
FAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGI+TNWD
Sbjct: 22 FAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWD 81
Query: 182 DMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNSPAMYVAIQAVL 361
DMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFN+PAMYVAIQAVL
Sbjct: 82 DMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVL 141
Query: 362 SLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDYLMK 514
SLYASGRTTG+VLDSGDGV+HTVPIYEGYALPHAILRLDLAGRDLTDYLMK
Sbjct: 142 SLYASGRTTGVVLDSGDGVTHTVPIYEGYALPHAILRLDLAGRDLTDYLMK 192
>Z83241-1|CAB05817.1| 375|Caenorhabditis elegans Hypothetical
protein T25C8.2 protein.
Length = 375
Score = 355 bits (873), Expect = 1e-98
Identities = 162/171 (94%), Positives = 169/171 (98%)
Frame = +2
Query: 2 FAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIITNWD 181
FAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGI+TNWD
Sbjct: 21 FAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWD 80
Query: 182 DMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNSPAMYVAIQAVL 361
DMEKIWHHTFYNELR+APEEHPVLLTEAPLNPK+NREKMTQIMFETFN+PAMYV IQAVL
Sbjct: 81 DMEKIWHHTFYNELRIAPEEHPVLLTEAPLNPKSNREKMTQIMFETFNTPAMYVNIQAVL 140
Query: 362 SLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDYLMK 514
SLYASGRTTGIVLD+GDGV+HTVPIYEGYALPHAI RLDLAGRDLTDY+MK
Sbjct: 141 SLYASGRTTGIVLDTGDGVTHTVPIYEGYALPHAIQRLDLAGRDLTDYMMK 191
>U64601-7|AAK77622.1| 332|Caenorhabditis elegans Actin protein 4,
isoform b protein.
Length = 332
Score = 314 bits (770), Expect = 3e-86
Identities = 144/148 (97%), Positives = 148/148 (100%)
Frame = +2
Query: 71 MVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIITNWDDMEKIWHHTFYNELRVAPEEHPV 250
MVGMGQKDSYVGDEAQSKRGILTLKYPIEHGI+TNWDDMEKIWHHTFYNELRVAPEEHPV
Sbjct: 1 MVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPV 60
Query: 251 LLTEAPLNPKANREKMTQIMFETFNSPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTV 430
LLTEAPLNPKANREKMTQIMFETFN+PAMYVAIQAVLSLYASGRTTG+VLDSGDGV+HTV
Sbjct: 61 LLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGVVLDSGDGVTHTV 120
Query: 431 PIYEGYALPHAILRLDLAGRDLTDYLMK 514
PIYEGYALPHAILRLDLAGRDLTDYLMK
Sbjct: 121 PIYEGYALPHAILRLDLAGRDLTDYLMK 148
>AL132949-19|CAB70110.2| 374|Caenorhabditis elegans Hypothetical
protein Y53F4B.22 protein.
Length = 374
Score = 231 bits (565), Expect = 2e-61
Identities = 100/170 (58%), Positives = 135/170 (79%), Gaps = 1/170 (0%)
Frame = +2
Query: 2 FAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIITNWD 181
FAG+ P+ F + VGRP++ VM G D ++G +A+S RG+ +++YP+EHGI+ NW
Sbjct: 24 FAGEQQPKVRFANFVGRPKYHRVMAGGLDGDIFIGPKAESNRGLFSIEYPMEHGIVNNWS 83
Query: 182 DMEKIWHHTF-YNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNSPAMYVAIQAV 358
DMEKIW + F ++L++ PEEHPVLLT+APLNP NRE+ +I FETFN PA+Y+ +QAV
Sbjct: 84 DMEKIWEYIFGQDQLKIFPEEHPVLLTDAPLNPLKNRERSAEIFFETFNVPALYIQMQAV 143
Query: 359 LSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDYL 508
LSLYA+GRTTG+VLDSGDGV+H VPI +G+A+ HAI R+DLAGRD+T+YL
Sbjct: 144 LSLYATGRTTGVVLDSGDGVTHAVPIVKGFAMKHAIQRMDLAGRDVTEYL 193
>Z71181-1|CAA94894.1| 395|Caenorhabditis elegans Hypothetical
protein K07C5.1 protein.
Length = 395
Score = 192 bits (469), Expect = 1e-49
Identities = 92/174 (52%), Positives = 124/174 (71%), Gaps = 3/174 (1%)
Frame = +2
Query: 2 FAGDDAPRAVFPSIVGRPRHQGVM-VGMGQ-KDSYVGDEAQSKRGILTLKYPIEHGIITN 175
+AG + P +FPS+VGRP + VG + KD VG+E R +L + YP+++GI+ N
Sbjct: 22 YAGTNFPAHIFPSMVGRPIVRSTQRVGNIEIKDLMVGEECSQLRQMLDINYPMDNGIVRN 81
Query: 176 WDDMEKIWHHTFYNE-LRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNSPAMYVAIQ 352
WDDM +W HTF E L + P+E +LLTE PLNP +NREKM Q+MFE + ++YVA+Q
Sbjct: 82 WDDMAHVWDHTFGPEKLDIDPKECKLLLTEPPLNPNSNREKMFQVMFEQYGFNSIYVAVQ 141
Query: 353 AVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDYLMK 514
AVL+LYA G TG+V+DSGDGV+H P+YEG+AL H RLD+AGRD+T YL+K
Sbjct: 142 AVLTLYAQGLLTGVVVDSGDGVTHICPVYEGFALHHLTRRLDIAGRDITKYLIK 195
>AC024200-9|AAF36012.1| 425|Caenorhabditis elegans Arp2/3 complex
component protein 1 protein.
Length = 425
Score = 147 bits (357), Expect = 4e-36
Identities = 71/156 (45%), Positives = 99/156 (63%), Gaps = 9/156 (5%)
Frame = +2
Query: 68 VMVGMGQKDSYVGDEAQSKRGI-LTLKYPIEHGIITNWDDMEKIWHHTFYNELRVAPEEH 244
V G+ D ++GDEA S T+KYPI HGI+ +WD ME+ W + LR PE+H
Sbjct: 56 VGAGIDDLDFFIGDEALSPAATNYTVKYPIRHGIVEDWDLMERYWEQCIFKYLRAEPEDH 115
Query: 245 PVLLTEAPLNPKANREKMTQIMFETFNSPAMYVAIQAVLSLYASGRT--------TGIVL 400
LLTE PLN NRE +IMFE+FN P +Y+A+QAVL+L AS + TG+V+
Sbjct: 116 FFLLTEPPLNTPENREYTAEIMFESFNVPGLYIAVQAVLALTASWNSREANERSLTGLVI 175
Query: 401 DSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDYL 508
DSGDGV+H +P+ +GY + I + +AGRD+T ++
Sbjct: 176 DSGDGVTHCIPVADGYVIGSCIKHIPIAGRDITYFI 211
>J01046-1|AAA27890.1| 86|Caenorhabditis elegans protein (
C.elegans (nematode)actin gene IV, 5' end. ).
Length = 86
Score = 142 bits (345), Expect = 1e-34
Identities = 64/65 (98%), Positives = 65/65 (100%)
Frame = +2
Query: 2 FAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIITNWD 181
FAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGI+TNWD
Sbjct: 22 FAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWD 81
Query: 182 DMEKI 196
DMEKI
Sbjct: 82 DMEKI 86
>J01044-1|AAA27889.1| 86|Caenorhabditis elegans protein (
C.elegans (nematode)actin gene III, 5' end. ).
Length = 86
Score = 142 bits (345), Expect = 1e-34
Identities = 64/65 (98%), Positives = 65/65 (100%)
Frame = +2
Query: 2 FAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIITNWD 181
FAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGI+TNWD
Sbjct: 22 FAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWD 81
Query: 182 DMEKI 196
DMEKI
Sbjct: 82 DMEKI 86
>J01042-1|AAA27887.1| 86|Caenorhabditis elegans protein (
C.elegans (nematode)actin gene I, 5' end. ).
Length = 86
Score = 142 bits (345), Expect = 1e-34
Identities = 64/65 (98%), Positives = 65/65 (100%)
Frame = +2
Query: 2 FAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIITNWD 181
FAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGI+TNWD
Sbjct: 22 FAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWD 81
Query: 182 DMEKI 196
DMEKI
Sbjct: 82 DMEKI 86
>J01043-1|AAA27888.1| 83|Caenorhabditis elegans protein (
C.elegans (nematode)actin gene II, 5' end. ).
Length = 83
Score = 137 bits (331), Expect = 5e-33
Identities = 61/62 (98%), Positives = 62/62 (100%)
Frame = +2
Query: 2 FAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIITNWD 181
FAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGI+TNWD
Sbjct: 22 FAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWD 81
Query: 182 DM 187
DM
Sbjct: 82 DM 83
>AC006833-3|AAF60947.2| 436|Caenorhabditis elegans Hypothetical
protein ZK616.4 protein.
Length = 436
Score = 115 bits (276), Expect = 2e-26
Identities = 51/119 (42%), Positives = 80/119 (67%)
Frame = +2
Query: 152 IEHGIITNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNSP 331
++ G+I +W+ EKI H++ N L P EHPVL +E+ N +A REK+T+IMFE F P
Sbjct: 94 MKEGLIEDWELFEKIVEHSYENILYSNPSEHPVLFSESSWNDRARREKLTEIMFEKFQVP 153
Query: 332 AMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDYL 508
A Y++ VLS +A GRT G+++DSG + VP+++GYA+ HA+++ + G +T+ L
Sbjct: 154 AYYLSKNVVLSCFAQGRTHGLMVDSGATQTSVVPVFDGYAVTHAVVKCPIGGDLITEQL 212
>Z46676-5|CAA86667.3| 418|Caenorhabditis elegans Hypothetical
protein C08B11.6 protein.
Length = 418
Score = 54.8 bits (126), Expect = 3e-08
Identities = 41/169 (24%), Positives = 78/169 (46%), Gaps = 4/169 (2%)
Frame = +2
Query: 14 DAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIITNWDDMEK 193
++PR V SIV + +H+ V + + +E K + ++ PIE G + NWD ++
Sbjct: 23 ESPRLVPNSIV-KAKHEKKRVFVAHEQ----EECSDKFSLFYVR-PIERGYVVNWDTQQQ 76
Query: 194 IWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNSPAMYVAIQAVLSLYA 373
IW TF + V + LT+ A + ++I+F+ F ++ + L
Sbjct: 77 IWEKTF-GSMDVEASTSRIALTDNNYLIPALPDVSSEILFDYFGFTEVHKTSASTLVAKH 135
Query: 374 SGRTT----GIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDYL 508
S + +V+DSG + G + +++R+D+ G+ LT+ L
Sbjct: 136 SNKINNEKCAVVVDSGFSWTTVASFVNGMLIQDSVIRIDVGGKALTNKL 184
>U24189-2|AAC47513.1| 418|Caenorhabditis elegans actin-related
protein-like protein.
Length = 418
Score = 54.8 bits (126), Expect = 3e-08
Identities = 41/169 (24%), Positives = 78/169 (46%), Gaps = 4/169 (2%)
Frame = +2
Query: 14 DAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIITNWDDMEK 193
++PR V SIV + +H+ V + + +E K + ++ PIE G + NWD ++
Sbjct: 23 ESPRLVPNSIV-KAKHEKKRVFVAHEQ----EECSDKFSLFYVR-PIERGYVVNWDTQQQ 76
Query: 194 IWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNSPAMYVAIQAVLSLYA 373
IW TF + V + LT+ A + ++I+F+ F ++ + L
Sbjct: 77 IWEKTF-GSMDVEASTSRIALTDNNYLIPALPDVSSEILFDYFGFTEVHKTSASTLVAKH 135
Query: 374 SGRTT----GIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDYL 508
S + +V+DSG + G + +++R+D+ G+ LT+ L
Sbjct: 136 SNKINNEKCAVVVDSGFSWTTVASFVNGMLIQDSVIRIDVGGKALTNKL 184
>U40799-8|AAA81487.1| 552|Caenorhabditis elegans Hypothetical
protein F42C5.9 protein.
Length = 552
Score = 50.8 bits (116), Expect = 6e-07
Identities = 44/163 (26%), Positives = 69/163 (42%)
Frame = +2
Query: 20 PRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIITNWDDMEKIW 199
P++ FP+I R + VG + R I +E I D+ K
Sbjct: 202 PQSFFPAIAVRTDDGKIFVGEDAYRPEIRHNGDFVRPISATDPSVERYSIDK--DVLKAV 259
Query: 200 HHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNSPAMYVAIQAVLSLYASG 379
EL+V P ++ VLL+ P ++ QI E + + Q L LYA
Sbjct: 260 IGKVTKELKVEPWKYKVLLSIPQNIPTVLIGELLQICLEDIKFQSAGITRQPSLILYAYD 319
Query: 380 RTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDYL 508
TTG+V+D G+ V + VP+ +GY + AI + + + D L
Sbjct: 320 VTTGVVVDIGERV-NIVPVIDGYVVESAICSIPYGSQQMGDSL 361
>U80439-8|AAB37646.3| 1724|Caenorhabditis elegans Hypothetical
protein C01G8.9a protein.
Length = 1724
Score = 31.9 bits (69), Expect = 0.28
Identities = 14/32 (43%), Positives = 19/32 (59%)
Frame = -1
Query: 417 TPSPESSTIPVVRPEAYSESTAWMATYMAGEL 322
TP P SST+PVV P ++ T +Y+A L
Sbjct: 865 TPQPLSSTMPVVAPSTSTQPTPTTGSYLANTL 896
>U97193-7|AAK68163.1| 299|Caenorhabditis elegans Yeast sir related
protein 2.4 protein.
Length = 299
Score = 31.5 bits (68), Expect = 0.37
Identities = 31/114 (27%), Positives = 49/114 (42%), Gaps = 3/114 (2%)
Frame = +2
Query: 104 GDEAQSKRGILTLKYPIEHGIITNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKA 283
G + K TL + E + + D + K W T + L + + + PL+ K+
Sbjct: 183 GRSCRGKLRDATLDWDTEISL-NHLDRIRKAWKQTSHL-LCIGTSLEIIPMGSLPLDAKS 240
Query: 284 NREKMTQIMF-ETFNSPAMYVAIQA--VLSLYASGRTTGIVLDSGDGVSHTVPI 436
K T I + ET + + AI A L LY+ G+ +D GD + VPI
Sbjct: 241 KGIKTTTINYQETAHEKIVETAIHADVKLILYSLCNALGVNVDLGDDLPDEVPI 294
>Z46791-5|CAA86755.2| 948|Caenorhabditis elegans Hypothetical
protein C09G5.6 protein.
Length = 948
Score = 28.7 bits (61), Expect = 2.6
Identities = 18/39 (46%), Positives = 19/39 (48%)
Frame = +1
Query: 34 PVHRGSPSPPGRDGRYGPERLLRG*RGPEQERYPHSEVP 150
P RG P PPG G+ GP R LRG G P S P
Sbjct: 379 PGPRGRPGPPGFPGQDGP-RGLRGLNGGYSGVQPSSYDP 416
>Z22964-2|CAA80537.1| 1759|Caenorhabditis elegans a2(IV) collagen
protein.
Length = 1759
Score = 28.7 bits (61), Expect = 2.6
Identities = 13/30 (43%), Positives = 14/30 (46%)
Frame = -2
Query: 134 GYLSCSGPRHPRRSLSGPYRPSRPGGEGDP 45
GY GP P + GP P PG EG P
Sbjct: 387 GYPGAPGPAGPIGNTGGPGLPGYPGNEGLP 416
Score = 27.1 bits (57), Expect = 8.0
Identities = 16/41 (39%), Positives = 19/41 (46%), Gaps = 3/41 (7%)
Frame = +1
Query: 31 LPVHRGSPSPPGRD---GRYGPERLLRG*RGPEQERYPHSE 144
LP G+P PPG D G GP + GP YP +E
Sbjct: 373 LPGRPGNPGPPGTDGYPGAPGPAGPIGNTGGPGLPGYPGNE 413
>Z22964-1|CAA80536.1| 1758|Caenorhabditis elegans a2(IV) collagen
protein.
Length = 1758
Score = 28.7 bits (61), Expect = 2.6
Identities = 13/30 (43%), Positives = 14/30 (46%)
Frame = -2
Query: 134 GYLSCSGPRHPRRSLSGPYRPSRPGGEGDP 45
GY GP P + GP P PG EG P
Sbjct: 386 GYPGAPGPAGPIGNTGGPGLPGYPGNEGLP 415
Score = 27.1 bits (57), Expect = 8.0
Identities = 16/41 (39%), Positives = 19/41 (46%), Gaps = 3/41 (7%)
Frame = +1
Query: 31 LPVHRGSPSPPGRD---GRYGPERLLRG*RGPEQERYPHSE 144
LP G+P PPG D G GP + GP YP +E
Sbjct: 372 LPGRPGNPGPPGTDGYPGAPGPAGPIGNTGGPGLPGYPGNE 412
>U53342-4|AAA96216.1| 1758|Caenorhabditis elegans Lethal protein 2,
isoform a protein.
Length = 1758
Score = 28.7 bits (61), Expect = 2.6
Identities = 13/30 (43%), Positives = 14/30 (46%)
Frame = -2
Query: 134 GYLSCSGPRHPRRSLSGPYRPSRPGGEGDP 45
GY GP P + GP P PG EG P
Sbjct: 386 GYPGAPGPAGPIGNTGGPGLPGYPGNEGLP 415
Score = 27.1 bits (57), Expect = 8.0
Identities = 16/41 (39%), Positives = 19/41 (46%), Gaps = 3/41 (7%)
Frame = +1
Query: 31 LPVHRGSPSPPGRD---GRYGPERLLRG*RGPEQERYPHSE 144
LP G+P PPG D G GP + GP YP +E
Sbjct: 372 LPGRPGNPGPPGTDGYPGAPGPAGPIGNTGGPGLPGYPGNE 412
>U53342-3|AAA96215.1| 1759|Caenorhabditis elegans Lethal protein 2,
isoform b protein.
Length = 1759
Score = 28.7 bits (61), Expect = 2.6
Identities = 13/30 (43%), Positives = 14/30 (46%)
Frame = -2
Query: 134 GYLSCSGPRHPRRSLSGPYRPSRPGGEGDP 45
GY GP P + GP P PG EG P
Sbjct: 387 GYPGAPGPAGPIGNTGGPGLPGYPGNEGLP 416
Score = 27.1 bits (57), Expect = 8.0
Identities = 16/41 (39%), Positives = 19/41 (46%), Gaps = 3/41 (7%)
Frame = +1
Query: 31 LPVHRGSPSPPGRD---GRYGPERLLRG*RGPEQERYPHSE 144
LP G+P PPG D G GP + GP YP +E
Sbjct: 373 LPGRPGNPGPPGTDGYPGAPGPAGPIGNTGGPGLPGYPGNE 413
>U22327-1|AAA64312.1| 1795|Caenorhabditis elegans alpha2(IV)
collagen protein.
Length = 1795
Score = 28.7 bits (61), Expect = 2.6
Identities = 13/30 (43%), Positives = 14/30 (46%)
Frame = -2
Query: 134 GYLSCSGPRHPRRSLSGPYRPSRPGGEGDP 45
GY GP P + GP P PG EG P
Sbjct: 423 GYPGAPGPAGPIGNTGGPGLPGYPGNEGLP 452
Score = 27.1 bits (57), Expect = 8.0
Identities = 16/41 (39%), Positives = 19/41 (46%), Gaps = 3/41 (7%)
Frame = +1
Query: 31 LPVHRGSPSPPGRD---GRYGPERLLRG*RGPEQERYPHSE 144
LP G+P PPG D G GP + GP YP +E
Sbjct: 409 LPGRPGNPGPPGTDGYPGAPGPAGPIGNTGGPGLPGYPGNE 449
>U53155-5|AAC48270.1| 303|Caenorhabditis elegans Collagen protein
43 protein.
Length = 303
Score = 28.3 bits (60), Expect = 3.4
Identities = 11/20 (55%), Positives = 13/20 (65%)
Frame = +1
Query: 31 LPVHRGSPSPPGRDGRYGPE 90
LP RG P PPG G+ GP+
Sbjct: 186 LPGPRGPPGPPGEAGQPGPQ 205
>U12966-7|AAK84534.1| 352|Caenorhabditis elegans Dumpy : shorter
than wild-typeprotein 17 protein.
Length = 352
Score = 28.3 bits (60), Expect = 3.4
Identities = 16/40 (40%), Positives = 19/40 (47%), Gaps = 2/40 (5%)
Frame = +1
Query: 31 LPVHRGSPSPPGRDGRYGP--ERLLRG*RGPEQERYPHSE 144
LP +G+P PG G G +R G GP ER P E
Sbjct: 268 LPGAKGTPGAPGESGDQGEQGDRGATGIAGPPGERGPQGE 307
>AB072926-1|BAB69889.1| 303|Caenorhabditis elegans collagen
protein.
Length = 303
Score = 28.3 bits (60), Expect = 3.4
Identities = 11/20 (55%), Positives = 13/20 (65%)
Frame = +1
Query: 31 LPVHRGSPSPPGRDGRYGPE 90
LP RG P PPG G+ GP+
Sbjct: 186 LPGPRGPPGPPGEAGQPGPQ 205
>Z72507-3|CAA96625.1| 337|Caenorhabditis elegans Hypothetical
protein F17C11.3 protein.
Length = 337
Score = 27.9 bits (59), Expect = 4.6
Identities = 15/31 (48%), Positives = 18/31 (58%), Gaps = 1/31 (3%)
Frame = -2
Query: 134 GYLSCSGPRHPRRSLSGPY-RPSRPGGEGDP 45
G + GPR +R L GP RP RPG G+P
Sbjct: 184 GDIGSDGPRG-KRGLRGPRGRPGRPGINGNP 213
>AF000198-7|AAB53052.1| 418|Caenorhabditis elegans Collagen protein
50 protein.
Length = 418
Score = 27.9 bits (59), Expect = 4.6
Identities = 9/15 (60%), Positives = 11/15 (73%)
Frame = +1
Query: 46 GSPSPPGRDGRYGPE 90
G P PPG+DG GP+
Sbjct: 265 GPPGPPGKDGEAGPD 279
>Z79694-1|CAB01959.1| 303|Caenorhabditis elegans Hypothetical
protein C15A11.1 protein.
Length = 303
Score = 27.5 bits (58), Expect = 6.0
Identities = 10/15 (66%), Positives = 10/15 (66%)
Frame = +1
Query: 46 GSPSPPGRDGRYGPE 90
G P PPG DG GPE
Sbjct: 115 GPPGPPGPDGNAGPE 129
>M25479-1|AAA27993.1| 282|Caenorhabditis elegans collagen protein.
Length = 282
Score = 27.5 bits (58), Expect = 6.0
Identities = 12/30 (40%), Positives = 13/30 (43%)
Frame = -2
Query: 134 GYLSCSGPRHPRRSLSGPYRPSRPGGEGDP 45
G C GP PR YRP + G G P
Sbjct: 186 GAAGCPGPPGPRGEPGTEYRPGQAGRAGPP 215
>Z81458-5|CAB03825.2| 252|Caenorhabditis elegans Hypothetical
protein C03E10.6 protein.
Length = 252
Score = 27.1 bits (57), Expect = 8.0
Identities = 10/18 (55%), Positives = 11/18 (61%)
Frame = +1
Query: 31 LPVHRGSPSPPGRDGRYG 84
+P G P PPGR G YG
Sbjct: 41 IPGPPGKPGPPGRAGNYG 58
>Z78543-5|CAH10796.1| 1453|Caenorhabditis elegans Hypothetical
protein F29G6.3c protein.
Length = 1453
Score = 27.1 bits (57), Expect = 8.0
Identities = 18/58 (31%), Positives = 29/58 (50%), Gaps = 2/58 (3%)
Frame = -3
Query: 238 LGGDTQLIVEGVVPDLLHVIPVGDDTVLDGVLQSEDTSLALGLV--THVGVFLAHTDH 71
L G Q +V +VP +H+ +D++ L S+A+G V +H GV + H H
Sbjct: 215 LHGRDQSVVSSIVPASVHIQSDSEDSIAPSKLTH---SIAVGGVVDSHNGVNVLHRSH 269
>Z78543-4|CAB01754.1| 1785|Caenorhabditis elegans Hypothetical
protein F29G6.3b protein.
Length = 1785
Score = 27.1 bits (57), Expect = 8.0
Identities = 18/58 (31%), Positives = 29/58 (50%), Gaps = 2/58 (3%)
Frame = -3
Query: 238 LGGDTQLIVEGVVPDLLHVIPVGDDTVLDGVLQSEDTSLALGLV--THVGVFLAHTDH 71
L G Q +V +VP +H+ +D++ L S+A+G V +H GV + H H
Sbjct: 215 LHGRDQSVVSSIVPASVHIQSDSEDSIAPSKLTH---SIAVGGVVDSHNGVNVLHRSH 269
>Z78543-3|CAB01755.2| 772|Caenorhabditis elegans Hypothetical
protein F29G6.3a protein.
Length = 772
Score = 27.1 bits (57), Expect = 8.0
Identities = 18/58 (31%), Positives = 29/58 (50%), Gaps = 2/58 (3%)
Frame = -3
Query: 238 LGGDTQLIVEGVVPDLLHVIPVGDDTVLDGVLQSEDTSLALGLV--THVGVFLAHTDH 71
L G Q +V +VP +H+ +D++ L S+A+G V +H GV + H H
Sbjct: 215 LHGRDQSVVSSIVPASVHIQSDSEDSIAPSKLTH---SIAVGGVVDSHNGVNVLHRSH 269
>Z72514-1|CAA96674.1| 428|Caenorhabditis elegans Hypothetical
protein T10B10.1 protein.
Length = 428
Score = 27.1 bits (57), Expect = 8.0
Identities = 10/12 (83%), Positives = 12/12 (100%)
Frame = +3
Query: 6 PATTRPAPSSRP 41
PATTRPAP+S+P
Sbjct: 329 PATTRPAPASQP 340
>Z70208-1|CAA94141.1| 339|Caenorhabditis elegans Hypothetical
protein F54B11.1 protein.
Length = 339
Score = 27.1 bits (57), Expect = 8.0
Identities = 12/24 (50%), Positives = 12/24 (50%)
Frame = -2
Query: 116 GPRHPRRSLSGPYRPSRPGGEGDP 45
GP P P RP RPGG G P
Sbjct: 144 GPPGPSGHPGKPGRPGRPGGHGMP 167
>Z27078-7|CAE52901.2| 1502|Caenorhabditis elegans Hypothetical
protein K04H4.1b protein.
Length = 1502
Score = 27.1 bits (57), Expect = 8.0
Identities = 12/33 (36%), Positives = 17/33 (51%)
Frame = -2
Query: 134 GYLSCSGPRHPRRSLSGPYRPSRPGGEGDPRWT 36
G+ GP PR + P P +PG +G P +T
Sbjct: 388 GHDGLPGPVGPRGPVGAPGAPGQPGIDGMPGYT 420
>Z27078-6|CAA81584.4| 1759|Caenorhabditis elegans Hypothetical
protein K04H4.1a protein.
Length = 1759
Score = 27.1 bits (57), Expect = 8.0
Identities = 12/33 (36%), Positives = 17/33 (51%)
Frame = -2
Query: 134 GYLSCSGPRHPRRSLSGPYRPSRPGGEGDPRWT 36
G+ GP PR + P P +PG +G P +T
Sbjct: 388 GHDGLPGPVGPRGPVGAPGAPGQPGIDGMPGYT 420
>X56979-1|CAA40299.1| 1758|Caenorhabditis elegans alpha1(IV)
collagen protein.
Length = 1758
Score = 27.1 bits (57), Expect = 8.0
Identities = 12/33 (36%), Positives = 17/33 (51%)
Frame = -2
Query: 134 GYLSCSGPRHPRRSLSGPYRPSRPGGEGDPRWT 36
G+ GP PR + P P +PG +G P +T
Sbjct: 387 GHDGLPGPVGPRGPVGAPGAPGQPGIDGMPGYT 419
>U58736-1|AAB00598.1| 302|Caenorhabditis elegans Dumpy : shorter
than wild-typeprotein 3 protein.
Length = 302
Score = 27.1 bits (57), Expect = 8.0
Identities = 10/13 (76%), Positives = 10/13 (76%)
Frame = +1
Query: 46 GSPSPPGRDGRYG 84
G P PPGRDGR G
Sbjct: 114 GPPGPPGRDGRPG 126
>AF067616-11|AAC19194.2| 627|Caenorhabditis elegans Collagen
protein 99 protein.
Length = 627
Score = 27.1 bits (57), Expect = 8.0
Identities = 10/13 (76%), Positives = 10/13 (76%)
Frame = +1
Query: 46 GSPSPPGRDGRYG 84
G P PPGRDGR G
Sbjct: 333 GPPGPPGRDGRPG 345
>AF022985-12|AAB69959.1| 319|Caenorhabditis elegans Collagen
protein 143 protein.
Length = 319
Score = 27.1 bits (57), Expect = 8.0
Identities = 10/24 (41%), Positives = 12/24 (50%)
Frame = -2
Query: 116 GPRHPRRSLSGPYRPSRPGGEGDP 45
GPR P P +P PG G+P
Sbjct: 170 GPRGPAGDAGSPGQPGHPGSPGNP 193
>AF022985-10|AAB69961.1| 325|Caenorhabditis elegans Collagen
protein 142 protein.
Length = 325
Score = 27.1 bits (57), Expect = 8.0
Identities = 10/24 (41%), Positives = 12/24 (50%)
Frame = -2
Query: 116 GPRHPRRSLSGPYRPSRPGGEGDP 45
GPR P P +P PG G+P
Sbjct: 170 GPRGPAGDAGSPGQPGHPGSPGNP 193
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,590,350
Number of Sequences: 27780
Number of extensions: 246730
Number of successful extensions: 1975
Number of sequences better than 10.0: 50
Number of HSP's better than 10.0 without gapping: 1086
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1948
length of database: 12,740,198
effective HSP length: 77
effective length of database: 10,601,138
effective search space used: 996506972
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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