Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= epV30494
         (516 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292370-1|CAL23182.1|  418|Tribolium castaneum gustatory recept...    23   2.1  
AM292335-1|CAL23147.2|  374|Tribolium castaneum gustatory recept...    23   2.1  
DQ659248-1|ABG47446.1|  496|Tribolium castaneum chitinase 8 prot...    21   4.9  
DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    21   6.5  
AY884061-1|AAX84202.1|  717|Tribolium castaneum laccase 2A protein.    21   8.6  

>AM292370-1|CAL23182.1|  418|Tribolium castaneum gustatory receptor
           candidate 49 protein.
          Length = 418

 Score = 22.6 bits (46), Expect = 2.1
 Identities = 8/21 (38%), Positives = 14/21 (66%)
 Frame = -1

Query: 438 LLIYGMVPSSLLLRVFAFVPV 376
           +L Y  +PS +   +F+FVP+
Sbjct: 173 VLFYPFLPSDVSYNLFSFVPL 193


>AM292335-1|CAL23147.2|  374|Tribolium castaneum gustatory receptor
           candidate 14 protein.
          Length = 374

 Score = 22.6 bits (46), Expect = 2.1
 Identities = 8/21 (38%), Positives = 14/21 (66%)
 Frame = -1

Query: 438 LLIYGMVPSSLLLRVFAFVPV 376
           +L Y  +PS +   +F+FVP+
Sbjct: 129 VLFYPFLPSDVSYNLFSFVPL 149


>DQ659248-1|ABG47446.1|  496|Tribolium castaneum chitinase 8
           protein.
          Length = 496

 Score = 21.4 bits (43), Expect = 4.9
 Identities = 5/8 (62%), Positives = 7/8 (87%)
 Frame = +1

Query: 325 CWWGKWSS 348
           C+WG WS+
Sbjct: 28  CYWGTWST 35


>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 protein.
          Length = 2700

 Score = 21.0 bits (42), Expect = 6.5
 Identities = 7/22 (31%), Positives = 10/22 (45%)
 Frame = +1

Query: 325  CWWGKWSSMGCFKSLGGHRNES 390
            C WGK+    C   L    N++
Sbjct: 1297 CLWGKYEVFNCAPGLHWDNNKN 1318


>AY884061-1|AAX84202.1|  717|Tribolium castaneum laccase 2A protein.
          Length = 717

 Score = 20.6 bits (41), Expect = 8.6
 Identities = 8/14 (57%), Positives = 8/14 (57%)
 Frame = +1

Query: 286 HADQDAVEPATPTC 327
           HAD   V P  PTC
Sbjct: 690 HADLPPVPPNFPTC 703


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 112,294
Number of Sequences: 336
Number of extensions: 2059
Number of successful extensions: 5
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5
length of database: 122,585
effective HSP length: 53
effective length of database: 104,777
effective search space used: 12363686
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)