Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= epV30492
         (516 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB158503-1|BAD69710.1|  151|Homo sapiens splice variant of four ...    31   3.2  
Z72496-1|CAA96577.1| 3570|Homo sapiens mucin MUC5B protein.            30   4.2  
AB018288-1|BAA34465.1|  909|Homo sapiens KIAA0745 protein protein.     30   5.5  

>AB158503-1|BAD69710.1|  151|Homo sapiens splice variant of four and
           a half LIM domain protein 2 protein.
          Length = 151

 Score = 30.7 bits (66), Expect = 3.2
 Identities = 16/37 (43%), Positives = 22/37 (59%), Gaps = 1/37 (2%)
 Frame = +1

Query: 238 WSTPINFGSRAPRTSSVIVSQLSSDLSSPKT-RLSLC 345
           WST    G R   +++   SQL   +SSPKT R+S+C
Sbjct: 57  WSTRAAAGMRPASSATAASSQLEPRVSSPKTIRISVC 93


>Z72496-1|CAA96577.1| 3570|Homo sapiens mucin MUC5B protein.
          Length = 3570

 Score = 30.3 bits (65), Expect = 4.2
 Identities = 20/59 (33%), Positives = 31/59 (52%)
 Frame = +1

Query: 262 SRAPRTSSVIVSQLSSDLSSPKTRLSLCTSATVSL*R*AMMFKATMADLPTATARTRQA 438
           +RAP  S+  V  LS  L+SP+   +L T+ T    + A   + T+  + T+T  TR A
Sbjct: 316 TRAPPASTTAVPTLSEGLTSPRYTSTLGTATTGGPRQSAGSTEPTVPGVATSTLPTRSA 374


>AB018288-1|BAA34465.1|  909|Homo sapiens KIAA0745 protein protein.
          Length = 909

 Score = 29.9 bits (64), Expect = 5.5
 Identities = 14/29 (48%), Positives = 21/29 (72%)
 Frame = +1

Query: 55  LCMLQIPTSLTTFWRSSFTIASSLPITTV 141
           LC +QIPTS    WRS+F  +S+L ++T+
Sbjct: 247 LCTVQIPTS----WRSAFLDSSTLQLSTI 271


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 60,099,533
Number of Sequences: 237096
Number of extensions: 1063874
Number of successful extensions: 3260
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 3192
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3260
length of database: 76,859,062
effective HSP length: 85
effective length of database: 56,705,902
effective search space used: 4876707572
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)