Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= epV30491
(516 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_40413| Best HMM Match : No HMM Matches (HMM E-Value=.) 97 8e-21
SB_40412| Best HMM Match : No HMM Matches (HMM E-Value=.) 91 5e-19
SB_18673| Best HMM Match : CH (HMM E-Value=2.5e-05) 78 4e-15
SB_7905| Best HMM Match : CH (HMM E-Value=1.3e-10) 70 1e-12
SB_39070| Best HMM Match : No HMM Matches (HMM E-Value=.) 62 3e-10
SB_23839| Best HMM Match : No HMM Matches (HMM E-Value=.) 50 1e-06
SB_36121| Best HMM Match : CH (HMM E-Value=0.0017) 46 2e-05
SB_18675| Best HMM Match : NUMOD3 (HMM E-Value=8) 45 4e-05
SB_39072| Best HMM Match : No HMM Matches (HMM E-Value=.) 36 2e-04
SB_20280| Best HMM Match : No HMM Matches (HMM E-Value=.) 41 5e-04
SB_28994| Best HMM Match : No HMM Matches (HMM E-Value=.) 40 0.002
SB_2620| Best HMM Match : No HMM Matches (HMM E-Value=.) 36 0.026
SB_17658| Best HMM Match : GAS2 (HMM E-Value=6.9e-09) 34 0.080
SB_27584| Best HMM Match : F5_F8_type_C (HMM E-Value=0) 32 0.32
SB_4896| Best HMM Match : TFIID_20kDa (HMM E-Value=2.3e-05) 32 0.32
SB_15403| Best HMM Match : CH (HMM E-Value=0) 31 0.56
SB_36751| Best HMM Match : Exo_endo_phos (HMM E-Value=2e-12) 31 0.74
SB_7838| Best HMM Match : Filamin (HMM E-Value=1.1e-22) 30 0.98
SB_53975| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 0.98
SB_40626| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.3
SB_50497| Best HMM Match : CH (HMM E-Value=0.0084) 29 1.7
SB_12330| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.3
SB_33054| Best HMM Match : DEAD (HMM E-Value=0.42) 29 3.0
SB_43170| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 5.3
SB_11152| Best HMM Match : Myosin_head (HMM E-Value=0) 28 5.3
SB_1834| Best HMM Match : efhand (HMM E-Value=1e-06) 28 5.3
SB_56183| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 6.9
SB_29854| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 6.9
SB_10312| Best HMM Match : MpPF2 (HMM E-Value=0.26) 27 6.9
SB_595| Best HMM Match : CH (HMM E-Value=0) 27 6.9
SB_33240| Best HMM Match : DUF1087 (HMM E-Value=9.9) 27 9.2
SB_29956| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 9.2
SB_34038| Best HMM Match : Ubie_methyltran (HMM E-Value=0.0014) 27 9.2
>SB_40413| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 603
Score = 97.1 bits (231), Expect = 8e-21
Identities = 61/150 (40%), Positives = 86/150 (57%), Gaps = 7/150 (4%)
Frame = +2
Query: 71 QEQEVLTWISDVLGEPL--PNGAYEDV---LRDGVILCKLANKLAPGSVKKIQERGTNFQ 235
+E+E WI VLGE + NG + V L+DG +LC+LAN+L G KI ++ F+
Sbjct: 432 KEEEARKWIDTVLGESIFGENGGVDTVHQTLKDGQVLCRLANRL--GGDLKINQQKMPFK 489
Query: 236 LMENIQRFQAAIKK-YGVPEEEIFQTADPFERRNIPQVTLCLYALGRITQKHPEFTGPQL 412
MENI F + I+ GV + ++FQT D +E+ N+ V C++A+GR + PQL
Sbjct: 490 QMENIGNFLSFIENNLGVAKNDLFQTVDLYEKSNMWNVICCIHAVGRRAYSLGKDV-PQL 548
Query: 413 GPKMADKNERTFTEEQLRAHNAELN-LQMG 499
GPK + KN R FTE QL +N QMG
Sbjct: 549 GPKESTKNPRQFTERQLNEGKTIINSFQMG 578
>SB_40412| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 592
Score = 91.1 bits (216), Expect = 5e-19
Identities = 55/141 (39%), Positives = 79/141 (56%), Gaps = 5/141 (3%)
Frame = +2
Query: 62 NKDQEQEVLTWISDVLGEPLPNGA-----YEDVLRDGVILCKLANKLAPGSVKKIQERGT 226
+ D + WI +LGE + G +VL+DG +LC++ANKL G++K I
Sbjct: 65 DSDLAAQATAWIEGILGERVFGGKTGADDVHEVLKDGQVLCRVANKLG-GNIK-INSSKM 122
Query: 227 NFQLMENIQRFQAAIKKYGVPEEEIFQTADPFERRNIPQVTLCLYALGRITQKHPEFTGP 406
F++MEN +F GVP+ ++FQT D +E++N+P V ++ALGR + T
Sbjct: 123 AFKMMENTGKFLEFCDTIGVPKTDMFQTVDLYEKQNMPGVINGIHALGRKAHSTGK-TCL 181
Query: 407 QLGPKMADKNERTFTEEQLRA 469
LGPK A N R FTEEQ RA
Sbjct: 182 ALGPKEASANPREFTEEQRRA 202
>SB_18673| Best HMM Match : CH (HMM E-Value=2.5e-05)
Length = 195
Score = 78.2 bits (184), Expect = 4e-15
Identities = 57/138 (41%), Positives = 73/138 (52%), Gaps = 5/138 (3%)
Frame = +2
Query: 71 QEQEVLTWISDVLGEPLPNGA-----YEDVLRDGVILCKLANKLAPGSVKKIQERGTNFQ 235
QE+E WI VLGE + GA + VL+DG IL +LA KL G+ K+ E+ F+
Sbjct: 26 QEEEARIWIEAVLGEKVFGGAEGPDDVQKVLKDGKILARLAIKL--GAKIKVNEQNMPFK 83
Query: 236 LMENIQRFQAAIKKYGVPEEEIFQTADPFERRNIPQVTLCLYALGRITQKHPEFTGPQLG 415
MENI F + GV + FQTAD ++ N+ T C Q + P LG
Sbjct: 84 QMENIGNFLSHCGHLGVASGDQFQTADLYDNANM---TSC--------QLIKDLDIPTLG 132
Query: 416 PKMADKNERTFTEEQLRA 469
PK A+ N R FTEEQLRA
Sbjct: 133 PKEAEANVREFTEEQLRA 150
>SB_7905| Best HMM Match : CH (HMM E-Value=1.3e-10)
Length = 172
Score = 69.7 bits (163), Expect = 1e-12
Identities = 31/72 (43%), Positives = 47/72 (65%)
Frame = +2
Query: 134 YEDVLRDGVILCKLANKLAPGSVKKIQERGTNFQLMENIQRFQAAIKKYGVPEEEIFQTA 313
+++ L+ GV+LCKLAN + PG++KKI NF +MENI+ F ++ GV + F T
Sbjct: 90 FQNTLKSGVVLCKLANAIQPGAIKKINNAKMNFMMMENIENFCNFVQTKGVASQYQFVTI 149
Query: 314 DPFERRNIPQVT 349
D FE +N+ QV+
Sbjct: 150 DLFEGKNMHQVS 161
>SB_39070| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 539
Score = 62.1 bits (144), Expect = 3e-10
Identities = 30/76 (39%), Positives = 45/76 (59%), Gaps = 1/76 (1%)
Frame = +2
Query: 122 PNGAYEDVLRDGVILCKLANKLAPGSVKKIQERGTNFQLMENIQRFQAAIKK-YGVPEEE 298
P + + LR GVILCK+ANK+ ++ KI E +F + ENI +F ++ G+
Sbjct: 301 PGETFAEPLRSGVILCKIANKIKSNAIPKIGESNKSFVMQENISKFLDFCERVLGLDRLN 360
Query: 299 IFQTADPFERRNIPQV 346
+FQT D FER+N+ V
Sbjct: 361 LFQTVDLFERQNVGMV 376
Score = 33.9 bits (74), Expect = 0.080
Identities = 19/62 (30%), Positives = 34/62 (54%), Gaps = 6/62 (9%)
Frame = +2
Query: 179 NKLAPGSVKKIQE----RGTNFQLMENIQRFQAAI--KKYGVPEEEIFQTADPFERRNIP 340
N++ PG++ KI R FQ++ENI++F A + + ++F D +E+ N+
Sbjct: 205 NEVFPGAISKIHGINGGRFHGFQILENIEKFLKACQGEPFNCNVVDLFSPGDLYEKNNVG 264
Query: 341 QV 346
QV
Sbjct: 265 QV 266
Score = 27.1 bits (57), Expect = 9.2
Identities = 14/27 (51%), Positives = 16/27 (59%), Gaps = 1/27 (3%)
Frame = +2
Query: 404 PQLGPKMAD-KNERTFTEEQLRAHNAE 481
P GPK N R FTEEQL+A A+
Sbjct: 509 PLFGPKEGSGPNPREFTEEQLKAAKAK 535
>SB_23839| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 267
Score = 50.0 bits (114), Expect = 1e-06
Identities = 26/56 (46%), Positives = 34/56 (60%), Gaps = 2/56 (3%)
Frame = +2
Query: 176 ANKLAPGSVKK--IQERGTNFQLMENIQRFQAAIKKYGVPEEEIFQTADPFERRNI 337
AN + PG +KK + F++MENI F IK YGV EE IF T D +E+RN+
Sbjct: 188 ANAIQPGVIKKPHLNPGKMGFKMMENIGWFVNFIKSYGVQEEYIFVTVDLYEKRNV 243
>SB_36121| Best HMM Match : CH (HMM E-Value=0.0017)
Length = 209
Score = 45.6 bits (103), Expect = 2e-05
Identities = 24/79 (30%), Positives = 40/79 (50%)
Frame = +2
Query: 80 EVLTWISDVLGEPLPNGAYEDVLRDGVILCKLANKLAPGSVKKIQERGTNFQLMENIQRF 259
E WI P N + + L DGV+LC+L +A SV +I ++GT +N+ F
Sbjct: 32 EARRWIERATFTPFKNDDFRESLADGVLLCELIVNVANISVGRINKQGTAHAGRDNLSVF 91
Query: 260 QAAIKKYGVPEEEIFQTAD 316
A + G+ + ++F+ D
Sbjct: 92 FRACEALGLDKYQLFEHED 110
>SB_18675| Best HMM Match : NUMOD3 (HMM E-Value=8)
Length = 89
Score = 44.8 bits (101), Expect = 4e-05
Identities = 29/77 (37%), Positives = 41/77 (53%)
Frame = +2
Query: 239 MENIQRFQAAIKKYGVPEEEIFQTADPFERRNIPQVTLCLYALGRITQKHPEFTGPQLGP 418
MENI F + GV + ++FQT D +E++N+ A G PQLGP
Sbjct: 18 MENIGNFLLFCESLGVSKVDLFQTVDLYEKQNMAAAR----AKG--------LNCPQLGP 65
Query: 419 KMADKNERTFTEEQLRA 469
K A+ N R+F E++LRA
Sbjct: 66 KEAEANPRSFDEDKLRA 82
>SB_39072| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1011
Score = 35.5 bits (78), Expect(2) = 2e-04
Identities = 19/59 (32%), Positives = 32/59 (54%), Gaps = 2/59 (3%)
Frame = +2
Query: 218 RGTNFQLMENIQRFQAAIKK--YGVPEEEIFQTADPFERRNIPQVTLCLYALGRITQKH 388
+ T+ + ENI F A ++ + +++FQT FER+N+ QV + A R +KH
Sbjct: 891 KSTSLGMQENIANFLNACQEEPFNCNPQDLFQTVYLFERQNLGQVISGIQAFARKVRKH 949
Score = 26.6 bits (56), Expect(2) = 2e-04
Identities = 11/20 (55%), Positives = 13/20 (65%)
Frame = +2
Query: 398 TGPQLGPKMADKNERTFTEE 457
T P GPK A+KN R F E+
Sbjct: 984 TVPLFGPKEAEKNPRNFPEQ 1003
>SB_20280| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 263
Score = 41.1 bits (92), Expect = 5e-04
Identities = 30/125 (24%), Positives = 62/125 (49%), Gaps = 4/125 (3%)
Frame = +2
Query: 146 LRDGVILCKLANKLAPGSVKKI--QERGTNFQLMENIQRF-QAAIKKYGVPEEEIFQTAD 316
LRDGV+LC++AN L PG+V + + + + F ++NI+ F A + + + + ++F +
Sbjct: 55 LRDGVLLCQVANVLHPGAVVDVGMKPQMSQFMCLKNIRNFLTACTRLFNLADGDLFDANE 114
Query: 317 PFERRNIPQVTLCLYALGRITQKHPEFTGPQLGPKMADKNE-RTFTEEQLRAHNAELNLQ 493
++ + +V L L + PE P + N+ + +E + ++ E+ L
Sbjct: 115 LYDVSDFGKVVNTLSKLSHL----PESLHRGFEPFPPNTNKFAAYQDEDIYSNLEEIALS 170
Query: 494 MGFNK 508
G +
Sbjct: 171 SGITQ 175
>SB_28994| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 422
Score = 39.5 bits (88), Expect = 0.002
Identities = 25/80 (31%), Positives = 39/80 (48%), Gaps = 6/80 (7%)
Frame = +2
Query: 146 LRDGVILCKLANKLAPGSVKKIQ------ERGTNFQLMENIQRFQAAIKKYGVPEEEIFQ 307
L DGV+LC L N G++ I + T + M+N+ F A KK GV E +
Sbjct: 336 LADGVVLCHLVNSAYKGTIPSIHIPSAGVPKLTMTKCMKNVDYFLEACKKLGVDRELLCS 395
Query: 308 TADPFERRNIPQVTLCLYAL 367
+AD + ++ +V + AL
Sbjct: 396 SADILQEKSPQRVCATVQAL 415
>SB_2620| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 37
Score = 35.5 bits (78), Expect = 0.026
Identities = 16/22 (72%), Positives = 17/22 (77%)
Frame = +2
Query: 404 PQLGPKMADKNERTFTEEQLRA 469
P LGPK A+ N R FTEEQLRA
Sbjct: 10 PTLGPKEAEANVREFTEEQLRA 31
>SB_17658| Best HMM Match : GAS2 (HMM E-Value=6.9e-09)
Length = 959
Score = 33.9 bits (74), Expect = 0.080
Identities = 32/123 (26%), Positives = 54/123 (43%), Gaps = 23/123 (18%)
Frame = +2
Query: 74 EQEVLTWISDVLGEP-LPNGAYEDVLRDGVILCKLAN-------------------KLAP 193
++++ +WIS +LGE L + +L GV+LC+LAN L P
Sbjct: 29 KEDLASWISRLLGEEELNTDTFTSMLDTGVVLCRLANFIQTVGEEFFVRNPKFPRRGLFP 88
Query: 194 GSVKKIQERGT---NFQLMENIQRFQAAIKKYGVPEEEIFQTADPFERRNIPQVTLCLYA 364
++RG +F +N+ F ++ VP+ +F+T D +N V L L
Sbjct: 89 ACGVTYKQRGATHGSFVARDNVSNFIRWCRELRVPDVIMFETEDLVLNKNEKTVLLTLLE 148
Query: 365 LGR 373
+ R
Sbjct: 149 VAR 151
>SB_27584| Best HMM Match : F5_F8_type_C (HMM E-Value=0)
Length = 7381
Score = 31.9 bits (69), Expect = 0.32
Identities = 17/57 (29%), Positives = 27/57 (47%)
Frame = -1
Query: 231 KLVPLSWIFFTDPGANLLANLQRITPSLSTSSYAPFGSGSPKTSEIQVRTSCSWSLF 61
K+VP SW ++ L PS++ + P G GS + + +R S SW+ F
Sbjct: 6989 KIVPKSW----HSHMSMRVELYGCYPSMTRLCFKPLGVGSRRLPDANLRASSSWNRF 7041
>SB_4896| Best HMM Match : TFIID_20kDa (HMM E-Value=2.3e-05)
Length = 819
Score = 31.9 bits (69), Expect = 0.32
Identities = 14/36 (38%), Positives = 22/36 (61%)
Frame = +2
Query: 239 MENIQRFQAAIKKYGVPEEEIFQTADPFERRNIPQV 346
M I +F +GV + ++FQT D +E++NI QV
Sbjct: 700 MVTIAKFLDFCGTFGVAKSDLFQTVDLYEKQNIQQV 735
>SB_15403| Best HMM Match : CH (HMM E-Value=0)
Length = 1907
Score = 31.1 bits (67), Expect = 0.56
Identities = 20/64 (31%), Positives = 33/64 (51%), Gaps = 12/64 (18%)
Frame = +2
Query: 47 TMPARNKDQEQEVLTWISDVLGEP------LPNGAYEDV------LRDGVILCKLANKLA 190
T + +K+++ WI+ L E LP A ED ++DG++LCK+ N A
Sbjct: 38 TKHSHSKEEQVAFADWINSSLKEDESVHKYLPIDASEDSSDLYEKVKDGILLCKMINLSA 97
Query: 191 PGSV 202
PG++
Sbjct: 98 PGTI 101
>SB_36751| Best HMM Match : Exo_endo_phos (HMM E-Value=2e-12)
Length = 906
Score = 30.7 bits (66), Expect = 0.74
Identities = 14/47 (29%), Positives = 27/47 (57%)
Frame = +2
Query: 74 EQEVLTWISDVLGEPLPNGAYEDVLRDGVILCKLANKLAPGSVKKIQ 214
++++ W+S VL + + D L +GV+LCKLA + + + I+
Sbjct: 38 KEDLAEWLSRVLEVEVQADNFMDYLDNGVLLCKLAQLIQKAATEWIK 84
>SB_7838| Best HMM Match : Filamin (HMM E-Value=1.1e-22)
Length = 820
Score = 30.3 bits (65), Expect = 0.98
Identities = 18/49 (36%), Positives = 27/49 (55%), Gaps = 2/49 (4%)
Frame = +2
Query: 149 RDGVILCKLANKLAPGSV--KKIQERGTNFQLMENIQRFQAAIKKYGVP 289
RDG+ +C+L N L PG + K +E+ TN + I Q A +G+P
Sbjct: 454 RDGMAICELVNALQPGLIPDSKYKEK-TNSEATAKI-GIQTAHDAFGIP 500
>SB_53975| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 43
Score = 30.3 bits (65), Expect = 0.98
Identities = 16/33 (48%), Positives = 20/33 (60%), Gaps = 2/33 (6%)
Frame = +2
Query: 74 EQEVLTWISDVLGEPLPNG--AYEDVLRDGVIL 166
+ E + WI VLGE + G EDVL+DG IL
Sbjct: 10 DAEAVDWIEKVLGEKVCQGKSINEDVLKDGQIL 42
>SB_40626| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 979
Score = 29.9 bits (64), Expect = 1.3
Identities = 14/49 (28%), Positives = 24/49 (48%)
Frame = +3
Query: 225 PTSSSWRTFKGSKRQSRNTEYQKKKYSKPPILLRGVTFPK*HYVCTLWE 371
P + ++T + R E+Q+K+Y LL+G TF + LW+
Sbjct: 51 PNTEKYKTEEALNRSRAYLEFQRKRYGNLYQLLKGNTFTDAEDLVKLWD 99
>SB_50497| Best HMM Match : CH (HMM E-Value=0.0084)
Length = 2086
Score = 29.5 bits (63), Expect = 1.7
Identities = 31/113 (27%), Positives = 48/113 (42%), Gaps = 24/113 (21%)
Frame = +2
Query: 146 LRDGVILCKLANKL--------------APGSVKKIQE--RGTN----FQLMENIQRFQA 265
L DG +LCKLAN + PG K +E RG F EN+Q+F
Sbjct: 697 LEDGTLLCKLANYIQEMADTYGQKHNTHVPGKKIKFKESKRGHRESKLFHSRENVQKFLT 756
Query: 266 AIKKYGVPEEEIFQTADPFE----RRNIPQVTLCLYALGRITQKHPEFTGPQL 412
+ + +PE +F++ D R ++ +CL + R K+ P+L
Sbjct: 757 WCRWHDIPEAILFESNDVVLVDECRTGGREIVICLMEIARRVIKYEIKQVPKL 809
>SB_12330| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 466
Score = 29.1 bits (62), Expect = 2.3
Identities = 14/50 (28%), Positives = 26/50 (52%)
Frame = +2
Query: 185 LAPGSVKKIQERGTNFQLMENIQRFQAAIKKYGVPEEEIFQTADPFERRN 334
+AP +V +ERG + +++N+Q+ Q + G P P +R+N
Sbjct: 122 VAPIAVGLTEERGDSISVIQNLQQVQQQLHGSGEPVPVNLADMTPAQRKN 171
>SB_33054| Best HMM Match : DEAD (HMM E-Value=0.42)
Length = 1088
Score = 28.7 bits (61), Expect = 3.0
Identities = 24/100 (24%), Positives = 44/100 (44%), Gaps = 4/100 (4%)
Frame = +2
Query: 110 GEPLPNGAYEDVLRDGVILCKLANKLAPGSVKK---IQERGTNFQLMENIQRFQAAIKKY 280
GEP P+ + RDG + C L +L SV I ++ T + + ++ F +
Sbjct: 328 GEPGPHARACGIQRDGQLCCHLRGRLPEESVHSAFFIDDKETT-KRAKVLETFDEKLAPT 386
Query: 281 GVPEEEIFQTADPFERRNIPQVTL-CLYALGRITQKHPEF 397
G +E++F+ E + + L C+ ++ R Q F
Sbjct: 387 GCTKEDLFRLERKLEIKLVAVDALACMGSIPRPKQSCKNF 426
>SB_43170| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 90
Score = 27.9 bits (59), Expect = 5.3
Identities = 15/35 (42%), Positives = 19/35 (54%), Gaps = 3/35 (8%)
Frame = -1
Query: 306 WNISSSGTPYFL--IAAWNL*MFSMSWKLVPL-SW 211
WN GTPYF+ +WNL + + L PL SW
Sbjct: 29 WNPVLHGTPYFMGPRTSWNLVLHGTPYFLEPLTSW 63
>SB_11152| Best HMM Match : Myosin_head (HMM E-Value=0)
Length = 1997
Score = 27.9 bits (59), Expect = 5.3
Identities = 17/49 (34%), Positives = 26/49 (53%)
Frame = +2
Query: 344 VTLCLYALGRITQKHPEFTGPQLGPKMADKNERTFTEEQLRAHNAELNL 490
+ + L R+TQK P G +L ++ D NER +EQ A A++ L
Sbjct: 1153 IRVSLDVASRVTQKIPNEQGKELEHELDDLNER--LDEQGGATQAQMEL 1199
>SB_1834| Best HMM Match : efhand (HMM E-Value=1e-06)
Length = 659
Score = 27.9 bits (59), Expect = 5.3
Identities = 18/60 (30%), Positives = 28/60 (46%), Gaps = 2/60 (3%)
Frame = +2
Query: 224 TNFQLMENIQRFQAAIKKYGVPEEEIFQTADPFERRNI--PQVTLCLYALGRITQKHPEF 397
++ L E IQR + + + EE FQ DP +I Q CL ++G+ H +F
Sbjct: 242 SSVDLDELIQRIRHHVLVKRLRVEEFFQDFDPLRHGSISVSQFRQCLNSMGQTDLTHAQF 301
>SB_56183| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 561
Score = 27.5 bits (58), Expect = 6.9
Identities = 11/20 (55%), Positives = 14/20 (70%)
Frame = +2
Query: 278 YGVPEEEIFQTADPFERRNI 337
+GV E++ FQ DPFE R I
Sbjct: 490 HGVYEKDFFQPRDPFEMRRI 509
>SB_29854| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 3235
Score = 27.5 bits (58), Expect = 6.9
Identities = 15/73 (20%), Positives = 31/73 (42%)
Frame = +2
Query: 74 EQEVLTWISDVLGEPLPNGAYEDVLRDGVILCKLANKLAPGSVKKIQERGTNFQLMENIQ 253
+Q +L W+ + E +P + DG + L + +APG + + ++ L Q
Sbjct: 496 KQALLAWVKSKMPESVPMDNFTTHWNDGRAIACLVDAVAPGLLPECEDLDPKDALQNAQQ 555
Query: 254 RFQAAIKKYGVPE 292
+ A +P+
Sbjct: 556 AMKLAQDWLDIPQ 568
>SB_10312| Best HMM Match : MpPF2 (HMM E-Value=0.26)
Length = 522
Score = 27.5 bits (58), Expect = 6.9
Identities = 13/39 (33%), Positives = 20/39 (51%)
Frame = +3
Query: 378 LKNIPSLQDLS*DLKWLIRTNVPSRKNNFGPTTLNLTSK 494
L ++ L+DLS W+ +VPS + N P T +K
Sbjct: 401 LASVTDLEDLSFTSDWMSSEDVPSGRRNPSPKTSRTITK 439
>SB_595| Best HMM Match : CH (HMM E-Value=0)
Length = 905
Score = 27.5 bits (58), Expect = 6.9
Identities = 15/44 (34%), Positives = 25/44 (56%)
Frame = +2
Query: 71 QEQEVLTWISDVLGEPLPNGAYEDVLRDGVILCKLANKLAPGSV 202
+E+ WI+ + +P Y D L DG+IL +L +++ PG V
Sbjct: 674 EEKTFRNWINSLGIKPFVQNLYLD-LDDGMILFQLFDQVQPGIV 716
>SB_33240| Best HMM Match : DUF1087 (HMM E-Value=9.9)
Length = 183
Score = 27.1 bits (57), Expect = 9.2
Identities = 10/21 (47%), Positives = 15/21 (71%)
Frame = +3
Query: 258 SKRQSRNTEYQKKKYSKPPIL 320
S + +NT+Y KK +SKPP +
Sbjct: 41 STEKYKNTQYGKKTHSKPPAI 61
>SB_29956| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 114
Score = 27.1 bits (57), Expect = 9.2
Identities = 13/43 (30%), Positives = 20/43 (46%)
Frame = +1
Query: 145 AKGRCDPLQIGQQISSWISEKNPRERNQLPAHGEHSKVPSGNQ 273
A+GR P + Q I W+ K P N+ + + PS +Q
Sbjct: 62 ARGRAGPSKTRQPIPQWVQTKGPAGSNRQGPNRALVQGPSSHQ 104
>SB_34038| Best HMM Match : Ubie_methyltran (HMM E-Value=0.0014)
Length = 267
Score = 27.1 bits (57), Expect = 9.2
Identities = 10/19 (52%), Positives = 13/19 (68%)
Frame = +2
Query: 284 VPEEEIFQTADPFERRNIP 340
VP + +QTADPF R +P
Sbjct: 245 VPGRDAYQTADPFSRLKMP 263
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,799,388
Number of Sequences: 59808
Number of extensions: 390530
Number of successful extensions: 1082
Number of sequences better than 10.0: 33
Number of HSP's better than 10.0 without gapping: 1015
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1074
length of database: 16,821,457
effective HSP length: 77
effective length of database: 12,216,241
effective search space used: 1148326654
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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