Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= epV30490
(516 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC034502-1|AAH34502.1| 594|Homo sapiens choline dehydrogenase p... 87 3e-17
AJ272267-1|CAB75961.1| 482|Homo sapiens choline dehydrogenase p... 72 1e-12
BC104931-1|AAI04932.1| 161|Homo sapiens interleukin 25 protein. 32 1.0
BC104929-1|AAI04930.1| 161|Homo sapiens interleukin 25 protein. 32 1.0
BC069565-1|AAH69565.1| 177|Homo sapiens interleukin 25 protein. 32 1.0
AY359127-1|AAQ89484.1| 177|Homo sapiens IL17E protein. 32 1.0
AF461739-1|AAN39038.1| 161|Homo sapiens interleukin 17E protein. 32 1.0
AF458059-1|AAL57622.1| 161|Homo sapiens IL25 protein. 32 1.0
AF305200-1|AAG40848.1| 177|Homo sapiens interleukin 17E protein. 32 1.0
BC119640-1|AAI19641.1| 340|Homo sapiens alpha-1,4-N-acetylgluco... 31 3.2
BC119639-1|AAI19640.1| 340|Homo sapiens alpha-1,4-N-acetylgluco... 31 3.2
AF141315-1|AAD48406.1| 340|Homo sapiens alpha-1,4-N-acetylgluco... 31 3.2
>BC034502-1|AAH34502.1| 594|Homo sapiens choline dehydrogenase
protein.
Length = 594
Score = 87.0 bits (206), Expect = 3e-17
Identities = 49/135 (36%), Positives = 67/135 (49%), Gaps = 9/135 (6%)
Frame = +1
Query: 133 YDFIXXXXXXXXXXXXNRLSEISDWKVLLVEAG------GNPTLATEIPQPYYSNMGTSE 294
Y ++ RL+E +VLL+EAG G+ L+ +I P +
Sbjct: 41 YSYVVVGAGSAGCVLAGRLTEDPAERVLLLEAGPKDVRAGSKRLSWKIHMPAALVANLCD 100
Query: 295 D---WAYHTEPQEGACRAYKNKGCAWPRGKVLGGSSSINLMFYVRGNKADYDEWAADGNE 465
D W YHTE Q G + WPRG+V GGSSS+N M YVRG+ DY+ W G
Sbjct: 101 DRYNWCYHTEVQRGL----DGRVLYWPRGRVWGGSSSLNAMVYVRGHAEDYERWQRQGAR 156
Query: 466 GWSFEEVLPYFKKSE 510
GW + LPYF+K++
Sbjct: 157 GWDYAHCLPYFRKAQ 171
>AJ272267-1|CAB75961.1| 482|Homo sapiens choline dehydrogenase
protein.
Length = 482
Score = 72.1 bits (169), Expect = 1e-12
Identities = 27/50 (54%), Positives = 35/50 (70%)
Frame = +1
Query: 361 WPRGKVLGGSSSINLMFYVRGNKADYDEWAADGNEGWSFEEVLPYFKKSE 510
WPRG+V GGSSS+N M YVRG+ DY+ W G GW + LPYF+K++
Sbjct: 10 WPRGRVWGGSSSLNAMVYVRGHAEDYERWQRQGARGWDYAHCLPYFRKAQ 59
>BC104931-1|AAI04932.1| 161|Homo sapiens interleukin 25 protein.
Length = 161
Score = 32.3 bits (70), Expect = 1.0
Identities = 19/48 (39%), Positives = 25/48 (52%), Gaps = 1/48 (2%)
Frame = -3
Query: 481 PR-NSSLRFHRQPIRRNRPCYPERKTSN*CCCFRRAPYHVAKRIPCFC 341
PR NS L +H Q + RPC+ E+ T C RR Y V+ + C C
Sbjct: 110 PRGNSELLYHNQTVFYRRPCHGEKGTHKGYCLERRL-YRVS--LACVC 154
>BC104929-1|AAI04930.1| 161|Homo sapiens interleukin 25 protein.
Length = 161
Score = 32.3 bits (70), Expect = 1.0
Identities = 19/48 (39%), Positives = 25/48 (52%), Gaps = 1/48 (2%)
Frame = -3
Query: 481 PR-NSSLRFHRQPIRRNRPCYPERKTSN*CCCFRRAPYHVAKRIPCFC 341
PR NS L +H Q + RPC+ E+ T C RR Y V+ + C C
Sbjct: 110 PRGNSELLYHNQTVFYRRPCHGEKGTHKGYCLERRL-YRVS--LACVC 154
>BC069565-1|AAH69565.1| 177|Homo sapiens interleukin 25 protein.
Length = 177
Score = 32.3 bits (70), Expect = 1.0
Identities = 19/48 (39%), Positives = 25/48 (52%), Gaps = 1/48 (2%)
Frame = -3
Query: 481 PR-NSSLRFHRQPIRRNRPCYPERKTSN*CCCFRRAPYHVAKRIPCFC 341
PR NS L +H Q + RPC+ E+ T C RR Y V+ + C C
Sbjct: 126 PRGNSELLYHNQTVFYRRPCHGEKGTHKGYCLERRL-YRVS--LACVC 170
>AY359127-1|AAQ89484.1| 177|Homo sapiens IL17E protein.
Length = 177
Score = 32.3 bits (70), Expect = 1.0
Identities = 19/48 (39%), Positives = 25/48 (52%), Gaps = 1/48 (2%)
Frame = -3
Query: 481 PR-NSSLRFHRQPIRRNRPCYPERKTSN*CCCFRRAPYHVAKRIPCFC 341
PR NS L +H Q + RPC+ E+ T C RR Y V+ + C C
Sbjct: 126 PRGNSELLYHNQTVFYRRPCHGEKGTHKGYCLERRL-YRVS--LACVC 170
>AF461739-1|AAN39038.1| 161|Homo sapiens interleukin 17E protein.
Length = 161
Score = 32.3 bits (70), Expect = 1.0
Identities = 19/48 (39%), Positives = 25/48 (52%), Gaps = 1/48 (2%)
Frame = -3
Query: 481 PR-NSSLRFHRQPIRRNRPCYPERKTSN*CCCFRRAPYHVAKRIPCFC 341
PR NS L +H Q + RPC+ E+ T C RR Y V+ + C C
Sbjct: 110 PRGNSELLYHNQTVFYRRPCHGEKGTHKGYCLERRL-YRVS--LACVC 154
>AF458059-1|AAL57622.1| 161|Homo sapiens IL25 protein.
Length = 161
Score = 32.3 bits (70), Expect = 1.0
Identities = 19/48 (39%), Positives = 25/48 (52%), Gaps = 1/48 (2%)
Frame = -3
Query: 481 PR-NSSLRFHRQPIRRNRPCYPERKTSN*CCCFRRAPYHVAKRIPCFC 341
PR NS L +H Q + RPC+ E+ T C RR Y V+ + C C
Sbjct: 110 PRGNSELLYHNQTVFYRRPCHGEKGTHKGYCLERRL-YRVS--LACVC 154
>AF305200-1|AAG40848.1| 177|Homo sapiens interleukin 17E protein.
Length = 177
Score = 32.3 bits (70), Expect = 1.0
Identities = 19/48 (39%), Positives = 25/48 (52%), Gaps = 1/48 (2%)
Frame = -3
Query: 481 PR-NSSLRFHRQPIRRNRPCYPERKTSN*CCCFRRAPYHVAKRIPCFC 341
PR NS L +H Q + RPC+ E+ T C RR Y V+ + C C
Sbjct: 126 PRGNSELLYHNQTVFYRRPCHGEKGTHKGYCLERRL-YRVS--LACVC 170
>BC119640-1|AAI19641.1| 340|Homo sapiens
alpha-1,4-N-acetylglucosaminyltransferase protein.
Length = 340
Score = 30.7 bits (66), Expect = 3.2
Identities = 15/33 (45%), Positives = 22/33 (66%), Gaps = 1/33 (3%)
Frame = +2
Query: 308 ILNHRKGLV-VPTKTRDALGHVVRCSAEAAASI 403
+L+HR+G+V + T R H+V CS E+AA I
Sbjct: 45 LLSHRRGIVFLETSERMEPPHLVSCSVESAAKI 77
>BC119639-1|AAI19640.1| 340|Homo sapiens
alpha-1,4-N-acetylglucosaminyltransferase protein.
Length = 340
Score = 30.7 bits (66), Expect = 3.2
Identities = 15/33 (45%), Positives = 22/33 (66%), Gaps = 1/33 (3%)
Frame = +2
Query: 308 ILNHRKGLV-VPTKTRDALGHVVRCSAEAAASI 403
+L+HR+G+V + T R H+V CS E+AA I
Sbjct: 45 LLSHRRGIVFLETSERMEPPHLVSCSVESAAKI 77
>AF141315-1|AAD48406.1| 340|Homo sapiens
alpha-1,4-N-acetylglucosaminyltransferase protein.
Length = 340
Score = 30.7 bits (66), Expect = 3.2
Identities = 15/33 (45%), Positives = 22/33 (66%), Gaps = 1/33 (3%)
Frame = +2
Query: 308 ILNHRKGLV-VPTKTRDALGHVVRCSAEAAASI 403
+L+HR+G+V + T R H+V CS E+AA I
Sbjct: 45 LLSHRRGIVFLETSERMEPPHLVSCSVESAAKI 77
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.315 0.133 0.426
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 77,495,587
Number of Sequences: 237096
Number of extensions: 1687178
Number of successful extensions: 7324
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 7220
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7323
length of database: 76,859,062
effective HSP length: 85
effective length of database: 56,705,902
effective search space used: 4876707572
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.6 bits)
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