Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= epV30489
         (516 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY884062-1|AAX84203.1|  712|Tribolium castaneum laccase 2B protein.    26   0.17 
AY884061-1|AAX84202.1|  717|Tribolium castaneum laccase 2A protein.    26   0.17 
EF125545-1|ABL73929.1|  274|Tribolium castaneum obstractor C1 pr...    23   2.1  
AM292355-1|CAL23167.1|  324|Tribolium castaneum gustatory recept...    23   2.1  
AY884063-1|AAX84204.1|  682|Tribolium castaneum pro-phenol oxida...    21   4.9  
AY316682-1|AAQ83696.1|  456|Tribolium castaneum Sp-like zinc fin...    21   8.6  

>AY884062-1|AAX84203.1|  712|Tribolium castaneum laccase 2B protein.
          Length = 712

 Score = 26.2 bits (55), Expect = 0.17
 Identities = 14/36 (38%), Positives = 18/36 (50%)
 Frame = +3

Query: 333 FVKITYVMYLTKLASAWLKCQRTPNCTQSCWSHLLC 440
           +   T  +Y T L +A   C  TPN T + WSH  C
Sbjct: 122 YYHFTLELY-TVLGAACQVC--TPNATNTVWSHCQC 154


>AY884061-1|AAX84202.1|  717|Tribolium castaneum laccase 2A protein.
          Length = 717

 Score = 26.2 bits (55), Expect = 0.17
 Identities = 14/36 (38%), Positives = 18/36 (50%)
 Frame = +3

Query: 333 FVKITYVMYLTKLASAWLKCQRTPNCTQSCWSHLLC 440
           +   T  +Y T L +A   C  TPN T + WSH  C
Sbjct: 122 YYHFTLELY-TVLGAACQVC--TPNATNTVWSHCQC 154


>EF125545-1|ABL73929.1|  274|Tribolium castaneum obstractor C1
           protein.
          Length = 274

 Score = 22.6 bits (46), Expect = 2.1
 Identities = 13/34 (38%), Positives = 16/34 (47%)
 Frame = -2

Query: 353 YVRDLHELSVPSDELGSACSKIGSSSEVQPASPS 252
           Y  DL   S+   EL +     GSS   QPA+ S
Sbjct: 223 YYGDLDLKSIRKSELLAGLQSSGSSRSHQPATKS 256


>AM292355-1|CAL23167.1|  324|Tribolium castaneum gustatory receptor
           candidate 34 protein.
          Length = 324

 Score = 22.6 bits (46), Expect = 2.1
 Identities = 11/24 (45%), Positives = 15/24 (62%)
 Frame = +2

Query: 365 EARKRLAEVPKDTKLYSELLVTLI 436
           +A K L   PK  K+YS LL+T +
Sbjct: 11  DALKILGIGPKSNKIYSFLLLTTL 34


>AY884063-1|AAX84204.1|  682|Tribolium castaneum pro-phenol oxidase
           subunit 1 protein.
          Length = 682

 Score = 21.4 bits (43), Expect = 4.9
 Identities = 7/9 (77%), Positives = 7/9 (77%)
 Frame = -2

Query: 176 PSHRFLRPF 150
           P HRFL PF
Sbjct: 376 PDHRFLEPF 384


>AY316682-1|AAQ83696.1|  456|Tribolium castaneum Sp-like zinc finger
           protein protein.
          Length = 456

 Score = 20.6 bits (41), Expect = 8.6
 Identities = 8/19 (42%), Positives = 10/19 (52%)
 Frame = +1

Query: 460 GTHCHHPRPSNRQGSGGVP 516
           G H     PS   G+GG+P
Sbjct: 255 GLHATGSAPSPTAGAGGLP 273


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 102,447
Number of Sequences: 336
Number of extensions: 1831
Number of successful extensions: 6
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 122,585
effective HSP length: 53
effective length of database: 104,777
effective search space used: 12363686
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)