Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= epV30488
         (516 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BX537437-1|CAD97679.1| 1137|Homo sapiens hypothetical protein pr...    31   3.2  
BX537436-1|CAD97678.1|  974|Homo sapiens hypothetical protein pr...    31   3.2  
BC150186-1|AAI50187.1|  601|Homo sapiens CACNA2D4 protein protein.     31   3.2  
AF516695-1|AAN06672.1| 1120|Homo sapiens voltage-gated calcium c...    31   3.2  

>BX537437-1|CAD97679.1| 1137|Homo sapiens hypothetical protein
           protein.
          Length = 1137

 Score = 30.7 bits (66), Expect = 3.2
 Identities = 23/85 (27%), Positives = 40/85 (47%)
 Frame = +2

Query: 140 NMVVATKDNLKMKQMMDDVEMMIREGILTGKIERRDGTVISLKKSEDIENLARLVLGGLE 319
           N V     +L +++   DVE  +       KIE  DG  +  K SED+EN+ R  +  ++
Sbjct: 90  NTVTKYSGSLLLQKKYKDVESSL-------KIEEVDGLELVRKFSEDMENMLRRKVEAVQ 142

Query: 320 IVGDDAKVIHLTNLMKKMLSYGQYN 394
            + + A+   L +   + L +  YN
Sbjct: 143 NLVEAAEEADLNHEFNESLVFDYYN 167


>BX537436-1|CAD97678.1|  974|Homo sapiens hypothetical protein
           protein.
          Length = 974

 Score = 30.7 bits (66), Expect = 3.2
 Identities = 23/85 (27%), Positives = 40/85 (47%)
 Frame = +2

Query: 140 NMVVATKDNLKMKQMMDDVEMMIREGILTGKIERRDGTVISLKKSEDIENLARLVLGGLE 319
           N V     +L +++   DVE  +       KIE  DG  +  K SED+EN+ R  +  ++
Sbjct: 90  NTVTKYSGSLLLQKKYKDVESSL-------KIEEVDGLELVRKFSEDMENMLRRKVEAVQ 142

Query: 320 IVGDDAKVIHLTNLMKKMLSYGQYN 394
            + + A+   L +   + L +  YN
Sbjct: 143 NLVEAAEEADLNHEFNESLVFDYYN 167


>BC150186-1|AAI50187.1|  601|Homo sapiens CACNA2D4 protein protein.
          Length = 601

 Score = 30.7 bits (66), Expect = 3.2
 Identities = 23/85 (27%), Positives = 40/85 (47%)
 Frame = +2

Query: 140 NMVVATKDNLKMKQMMDDVEMMIREGILTGKIERRDGTVISLKKSEDIENLARLVLGGLE 319
           N V     +L +++   DVE  +       KIE  DG  +  K SED+EN+ R  +  ++
Sbjct: 90  NTVTKYSGSLLLQKKYKDVESSL-------KIEEVDGLELVRKFSEDMENMLRRKVEAVQ 142

Query: 320 IVGDDAKVIHLTNLMKKMLSYGQYN 394
            + + A+   L +   + L +  YN
Sbjct: 143 NLVEAAEEADLNHEFNESLVFDYYN 167


>AF516695-1|AAN06672.1| 1120|Homo sapiens voltage-gated calcium
           channel alpha(2)delta-4 subunit protein.
          Length = 1120

 Score = 30.7 bits (66), Expect = 3.2
 Identities = 23/85 (27%), Positives = 40/85 (47%)
 Frame = +2

Query: 140 NMVVATKDNLKMKQMMDDVEMMIREGILTGKIERRDGTVISLKKSEDIENLARLVLGGLE 319
           N V     +L +++   DVE  +       KIE  DG  +  K SED+EN+ R  +  ++
Sbjct: 73  NTVTKYSGSLLLQKKYKDVESSL-------KIEEVDGLELVRKFSEDMENMLRRKVEAVQ 125

Query: 320 IVGDDAKVIHLTNLMKKMLSYGQYN 394
            + + A+   L +   + L +  YN
Sbjct: 126 NLVEAAEEADLNHEFNESLVFDYYN 150


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 71,187,869
Number of Sequences: 237096
Number of extensions: 1400228
Number of successful extensions: 2852
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 2752
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2847
length of database: 76,859,062
effective HSP length: 85
effective length of database: 56,705,902
effective search space used: 4876707572
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)