Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= epV30488
         (516 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z99283-7|CAB16537.2|  985|Caenorhabditis elegans Hypothetical pr...    34   0.069
Z92782-14|CAI46605.1|  985|Caenorhabditis elegans Hypothetical p...    34   0.069
U55372-2|AAA98001.1|  980|Caenorhabditis elegans Hypothetical pr...    29   2.0  
AC006655-6|AAF39878.2|  383|Caenorhabditis elegans Hypothetical ...    29   2.6  
Z80344-8|CAB02490.2| 2268|Caenorhabditis elegans Hypothetical pr...    28   4.6  
AL117203-22|CAB60425.1| 2268|Caenorhabditis elegans Hypothetical...    28   4.6  
Z81481-3|CAB03949.1| 1496|Caenorhabditis elegans Hypothetical pr...    27   8.0  

>Z99283-7|CAB16537.2|  985|Caenorhabditis elegans Hypothetical protein
            Y70C5C.1 protein.
          Length = 985

 Score = 33.9 bits (74), Expect = 0.069
 Identities = 28/92 (30%), Positives = 43/92 (46%), Gaps = 1/92 (1%)
 Frame = +2

Query: 116  DEMPVRQNNMVVATKDNLKMKQMM-DDVEMMIREGILTGKIERRDGTVISLKKSEDIENL 292
            DE+  RQ N     +D   +K +  +DV  +  + I  G  ERR   VI   KSED   +
Sbjct: 876  DEIECRQYNFTRIEEDVELLKTIKKEDVIALFDKKIRKGAAERRKLAVIVHGKSEDRAAV 935

Query: 293  ARLVLGGLEIVGDDAKVIHLTNLMKKMLSYGQ 388
              ++   LE      +V++L  L + +  YGQ
Sbjct: 936  NEIIKKHLEDGKKKKEVLYLDQLRQFLPLYGQ 967


>Z92782-14|CAI46605.1|  985|Caenorhabditis elegans Hypothetical
            protein Y70C5C.1 protein.
          Length = 985

 Score = 33.9 bits (74), Expect = 0.069
 Identities = 28/92 (30%), Positives = 43/92 (46%), Gaps = 1/92 (1%)
 Frame = +2

Query: 116  DEMPVRQNNMVVATKDNLKMKQMM-DDVEMMIREGILTGKIERRDGTVISLKKSEDIENL 292
            DE+  RQ N     +D   +K +  +DV  +  + I  G  ERR   VI   KSED   +
Sbjct: 876  DEIECRQYNFTRIEEDVELLKTIKKEDVIALFDKKIRKGAAERRKLAVIVHGKSEDRAAV 935

Query: 293  ARLVLGGLEIVGDDAKVIHLTNLMKKMLSYGQ 388
              ++   LE      +V++L  L + +  YGQ
Sbjct: 936  NEIIKKHLEDGKKKKEVLYLDQLRQFLPLYGQ 967


>U55372-2|AAA98001.1|  980|Caenorhabditis elegans Hypothetical protein
            C02G6.1 protein.
          Length = 980

 Score = 29.1 bits (62), Expect = 2.0
 Identities = 21/89 (23%), Positives = 42/89 (47%), Gaps = 1/89 (1%)
 Frame = +2

Query: 119  EMPVRQNNMVVATKDNLKMKQM-MDDVEMMIREGILTGKIERRDGTVISLKKSEDIENLA 295
            ++  RQ +     K+   +K +  DDV  +  + I    +ERR   V+   K +D E L 
Sbjct: 866  QIECRQYDFARREKEVKVLKSIGKDDVIALFDKKIRKNAVERRKLVVLVHGKIDDQETLN 925

Query: 296  RLVLGGLEIVGDDAKVIHLTNLMKKMLSY 382
            R++   +E    + ++++L  L + +  Y
Sbjct: 926  RIIKKNVESGKKEKEILNLDQLRQSLPVY 954


>AC006655-6|AAF39878.2|  383|Caenorhabditis elegans Hypothetical
           protein H10D18.6 protein.
          Length = 383

 Score = 28.7 bits (61), Expect = 2.6
 Identities = 13/33 (39%), Positives = 18/33 (54%)
 Frame = +2

Query: 314 LEIVGDDAKVIHLTNLMKKMLSYGQYNMDKYTY 412
           +E VG    + H+T    KM S+ +YN D Y Y
Sbjct: 301 VEFVGKYGPLHHMTPYSLKMSSFQRYNYDIYVY 333


>Z80344-8|CAB02490.2| 2268|Caenorhabditis elegans Hypothetical
           protein F15D4.7 protein.
          Length = 2268

 Score = 27.9 bits (59), Expect = 4.6
 Identities = 11/25 (44%), Positives = 15/25 (60%)
 Frame = +2

Query: 44  DVKPMMWNEPLETGYWPKIRLPSGD 118
           +  P++W EP  TG   KIR+P  D
Sbjct: 738 EADPIVWKEPAGTGSKMKIRVPPTD 762


>AL117203-22|CAB60425.1| 2268|Caenorhabditis elegans Hypothetical
           protein F15D4.7 protein.
          Length = 2268

 Score = 27.9 bits (59), Expect = 4.6
 Identities = 11/25 (44%), Positives = 15/25 (60%)
 Frame = +2

Query: 44  DVKPMMWNEPLETGYWPKIRLPSGD 118
           +  P++W EP  TG   KIR+P  D
Sbjct: 738 EADPIVWKEPAGTGSKMKIRVPPTD 762


>Z81481-3|CAB03949.1| 1496|Caenorhabditis elegans Hypothetical
           protein C38D9.3 protein.
          Length = 1496

 Score = 27.1 bits (57), Expect = 8.0
 Identities = 11/25 (44%), Positives = 15/25 (60%)
 Frame = +2

Query: 44  DVKPMMWNEPLETGYWPKIRLPSGD 118
           +  P++W EP  TG   KIR+P  D
Sbjct: 777 EADPIVWKEPAGTGSKFKIRVPPTD 801


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,232,627
Number of Sequences: 27780
Number of extensions: 219260
Number of successful extensions: 626
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 594
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 626
length of database: 12,740,198
effective HSP length: 77
effective length of database: 10,601,138
effective search space used: 996506972
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)