Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= epV30487
(516 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF069739-1|AAC63272.2| 690|Apis mellifera translation initiatio... 25 0.61
DQ011228-1|AAY63897.1| 486|Apis mellifera Amt-2-like protein pr... 24 0.81
DQ667188-1|ABG75740.1| 383|Apis mellifera histamine-gated chlor... 23 2.5
AY352277-1|AAQ67418.1| 418|Apis mellifera complementary sex det... 23 2.5
Z26318-1|CAA81227.1| 544|Apis mellifera royal jelly protein RJP... 22 4.3
DQ667187-1|ABG75739.1| 428|Apis mellifera histamine-gated chlor... 21 5.7
AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecul... 21 5.7
AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member A... 21 5.7
AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein. 21 7.5
DQ071552-1|AAY82248.1| 495|Apis mellifera anarchy 1 protein. 21 10.0
AB167961-1|BAD51404.1| 554|Apis mellifera E74 protein. 21 10.0
>AF069739-1|AAC63272.2| 690|Apis mellifera translation initiation
factor 2 protein.
Length = 690
Score = 24.6 bits (51), Expect = 0.61
Identities = 9/25 (36%), Positives = 14/25 (56%)
Frame = +1
Query: 160 FYSGDSYIVLNTTGDKDRLTWDIHF 234
F GD+ I +N K+++ WD F
Sbjct: 666 FQPGDTIICINIKRQKEKIEWDPGF 690
>DQ011228-1|AAY63897.1| 486|Apis mellifera Amt-2-like protein
protein.
Length = 486
Score = 24.2 bits (50), Expect = 0.81
Identities = 9/13 (69%), Positives = 11/13 (84%)
Frame = -2
Query: 68 AWCTSGILGRVHS 30
A CTSGI+GR H+
Sbjct: 143 AICTSGIVGRTHT 155
>DQ667188-1|ABG75740.1| 383|Apis mellifera histamine-gated chloride
channel protein.
Length = 383
Score = 22.6 bits (46), Expect = 2.5
Identities = 9/15 (60%), Positives = 10/15 (66%)
Frame = -2
Query: 449 VPSLIVTWLKPEACP 405
V S I W+KPEA P
Sbjct: 229 VMSWIAFWIKPEAIP 243
>AY352277-1|AAQ67418.1| 418|Apis mellifera complementary sex
determiner protein.
Length = 418
Score = 22.6 bits (46), Expect = 2.5
Identities = 23/83 (27%), Positives = 30/83 (36%), Gaps = 1/83 (1%)
Frame = +2
Query: 254 ARTKPARRPSSR*TWTTNNSRDQRY-STERSNITSPRSS*NISHQPSAI*KADTPQASAT 430
+RTK R R W R+Q Y +R I SH K + S T
Sbjct: 29 SRTKEERLQYRREAWLVQQEREQEYEKLKRKMILEYELYIKYSHTHE---KKLVLERSKT 85
Query: 431 *RSMREQRNDSSRSRVKETSALS 499
E R+ S+ S +T LS
Sbjct: 86 KSKSPESRDRSNTSNTSKTFILS 108
>Z26318-1|CAA81227.1| 544|Apis mellifera royal jelly protein
RJP57-1 protein.
Length = 544
Score = 21.8 bits (44), Expect = 4.3
Identities = 9/25 (36%), Positives = 13/25 (52%)
Frame = +1
Query: 295 LDDEQFQGSAVQHREVQYYESKEFL 369
+D EQF + VQY S++ L
Sbjct: 281 VDTEQFSNPQYEENNVQYEGSQDIL 305
>DQ667187-1|ABG75739.1| 428|Apis mellifera histamine-gated chloride
channel protein.
Length = 428
Score = 21.4 bits (43), Expect = 5.7
Identities = 7/15 (46%), Positives = 10/15 (66%)
Frame = -2
Query: 449 VPSLIVTWLKPEACP 405
+ S + W+KPEA P
Sbjct: 260 IMSWVSFWIKPEAAP 274
>AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecule
AbsCAM-Ig7B protein.
Length = 1923
Score = 21.4 bits (43), Expect = 5.7
Identities = 14/51 (27%), Positives = 25/51 (49%)
Frame = +1
Query: 274 AAILTVNLDDEQFQGSAVQHREVQYYESKEFLEYFSPAIRYLKGGHASGFS 426
+A L V + ++ G + + E + S E L +SP + L+ G GF+
Sbjct: 994 SAELIVRTEPQRPAGPPI-NLEARALSSSEILITWSPPLPELRHGDIQGFN 1043
>AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member
AbsCAM-Ig7A protein.
Length = 1919
Score = 21.4 bits (43), Expect = 5.7
Identities = 14/51 (27%), Positives = 25/51 (49%)
Frame = +1
Query: 274 AAILTVNLDDEQFQGSAVQHREVQYYESKEFLEYFSPAIRYLKGGHASGFS 426
+A L V + ++ G + + E + S E L +SP + L+ G GF+
Sbjct: 990 SAELIVRTEPQRPAGPPI-NLEARALSSSEILITWSPPLPELRHGDIQGFN 1039
>AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein.
Length = 1946
Score = 21.0 bits (42), Expect = 7.5
Identities = 7/15 (46%), Positives = 11/15 (73%)
Frame = +1
Query: 52 PEVHQAFADAGRKPG 96
P++ QAFA+ +PG
Sbjct: 394 PQIRQAFAEETLQPG 408
>DQ071552-1|AAY82248.1| 495|Apis mellifera anarchy 1 protein.
Length = 495
Score = 20.6 bits (41), Expect = 10.0
Identities = 8/27 (29%), Positives = 12/27 (44%)
Frame = +1
Query: 145 TQFGLFYSGDSYIVLNTTGDKDRLTWD 225
T G S D Y +L + R+ W+
Sbjct: 108 TMHGTVQSYDKYDLLENVNNAARINWE 134
>AB167961-1|BAD51404.1| 554|Apis mellifera E74 protein.
Length = 554
Score = 20.6 bits (41), Expect = 10.0
Identities = 10/26 (38%), Positives = 15/26 (57%)
Frame = +2
Query: 269 ARRPSSR*TWTTNNSRDQRYSTERSN 346
A +P+S T T + R QRY+ +N
Sbjct: 87 ASQPTSTTTSVTPSCRRQRYNIAAAN 112
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 144,896
Number of Sequences: 438
Number of extensions: 3070
Number of successful extensions: 11
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11
length of database: 146,343
effective HSP length: 54
effective length of database: 122,691
effective search space used: 14354847
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -